Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:14:10 (27667): wrapper (7.7.26015): starting
06:14:10 (27667): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 06:14:10] Arguments: --nthreads 8
[2025-10-12 06:14:10] Threads: 8
[2025-10-12 06:14:10] Checking for CVMFS
[2025-10-12 06:14:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:14:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:14:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:14:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:14:10] 2.11.2.0 3213 627684 246912 151616 1 188 10454809 20275200 917 130560 1 358406440 99.992 26059266 20170 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 06:14:10] CVMFS is ok
[2025-10-12 06:14:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:14:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:14:10] Further information can be found at the LHC@home message board.
[2025-10-12 06:14:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:14:10] Checking for apptainer binary...
[2025-10-12 06:14:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:14:10] Running /usr/bin/apptainer --version
[2025-10-12 06:14:10] apptainer version 1.3.2-1.el7
[2025-10-12 06:14:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:14:10] c-205-38.aglt2.org
[2025-10-12 06:14:10] apptainer works
[2025-10-12 06:14:10] Set ATHENA_PROC_NUMBER=8
[2025-10-12 06:14:10] Set ATHENA_CORE_NUMBER=8
[2025-10-12 06:14:10] Starting ATLAS job with PandaID=6839660532
[2025-10-12 06:14:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:09:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:09:30]  protocol_id=None
[2025-10-12 07:09:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 07:09:30]  replicas=None
[2025-10-12 07:09:30]  scope=mc23_13p6TeV
[2025-10-12 07:09:30]  status=None
[2025-10-12 07:09:30]  status_code=0
[2025-10-12 07:09:30]  storage_token=
[2025-10-12 07:09:30]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839660532/log.46676269._074023.job.log.tgz.1
[2025-10-12 07:09:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/ac/log.46676269._074023.job.log.tgz.1
[2025-10-12 07:09:30]  workdir=None
[2025-10-12 07:09:30] ]
[2025-10-12 07:09:30] 2025-10-12 11:08:49,510 | INFO     | transferring file log.46676269._074023.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839660532/log.46676269._074023.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 07:09:30] 2025-10-12 11:08:49,510 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839660532/log.46676269._074023.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._074023.job
[2025-10-12 07:09:30] 2025-10-12 11:08:49,522 | INFO     | adding to output.list: log.46676269._074023.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/ac/log.46676269._074023.job.log.tg
[2025-10-12 07:09:30] 2025-10-12 11:08:49,523 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 07:09:30] 2025-10-12 11:08:49,523 | INFO     | summary of transferred files:
[2025-10-12 07:09:30] 2025-10-12 11:08:49,523 | INFO     |  -- lfn=log.46676269._074023.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 07:09:30] 2025-10-12 11:08:49,523 | INFO     | stage-out finished correctly
[2025-10-12 07:09:30] 2025-10-12 11:08:49,591 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 07:09:30] 2025-10-12 11:08:49,631 | INFO     | job 6839660532 has state=finished
[2025-10-12 07:09:30] 2025-10-12 11:08:49,632 | INFO     | preparing for final server update for job 6839660532 in state='finished'
[2025-10-12 07:09:30] 2025-10-12 11:08:49,632 | INFO     | this job has now completed (state=finished)
[2025-10-12 07:09:30] 2025-10-12 11:08:49,632 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 07:09:30] 2025-10-12 11:08:49,632 | INFO     | log transfer has been attempted: DONE
[2025-10-12 07:09:30] 2025-10-12 11:08:49,632 | INFO     | job 6839660532 has finished - writing final server update
[2025-10-12 07:09:30] 2025-10-12 11:08:49,632 | INFO     | total number of processed events: 400 (read)
[2025-10-12 07:09:30] 2025-10-12 11:08:49,632 | INFO     | executing command: lscpu
[2025-10-12 07:09:30] 2025-10-12 11:08:49,659 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 07:09:30] 2025-10-12 11:08:50,404 | INFO     | time since job start (3272s) is within the limit (172800.0s)
[2025-10-12 07:09:30] 2025-10-12 11:08:52,409 | INFO     | time since job start (3274s) is within the limit (172800.0s)
[2025-10-12 07:09:30] 2025-10-12 11:08:52,844 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 07:09:30] 2025-10-12 11:08:52,848 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 1623.791125
[2025-10-12 07:09:30] 2025-10-12 11:08:52,852 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839660532/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 07:09:30] 2025-10-12 11:08:52,853 | INFO     | extracted standard info from prmon json
[2025-10-12 07:09:30] 2025-10-12 11:08:52,853 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 07:09:30] 2025-10-12 11:08:52,853 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 07:09:30] 2025-10-12 11:08:52,853 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 07:09:30] 2025-10-12 11:08:52,854 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 07:09:30] 2025-10-12 11:08:52,855 | INFO     | fitting pss+swap vs Time
[2025-10-12 07:09:30] 2025-10-12 11:08:52,856 | INFO     | sum of square deviations: 32179208.0
[2025-10-12 07:09:30] 2025-10-12 11:08:52,856 | INFO     | sum of deviations: 80580877.99999994
[2025-10-12 07:09:30] 2025-10-12 11:08:52,856 | INFO     | mean x: 1760265787.0
[2025-10-12 07:09:30] 2025-10-12 11:08:52,856 | INFO     | mean y: 2589490.7021276597
[2025-10-12 07:09:30] 2025-10-12 11:08:52,856 | INFO     | -- intersect: -4405342569.957068
[2025-10-12 07:09:30] 2025-10-12 11:08:52,856 | INFO     | intersect: -4405342569.957068
[2025-10-12 07:09:30] 2025-10-12 11:08:52,857 | INFO     | chi2: 0.0025154252545699298
[2025-10-12 07:09:30] 2025-10-12 11:08:52,857 | INFO     | -- intersect: -4405342569.957068
[2025-10-12 07:09:30] 2025-10-12 11:08:52,857 | INFO     | current memory leak: 2.50 B/s (using 47 data points, chi2=0.00)
[2025-10-12 07:09:30] 2025-10-12 11:08:52,857 | INFO     | could have reported an average CPU frequency of 2703 MHz (5 samples)
[2025-10-12 07:09:30] 2025-10-12 11:08:52,857 | INFO     | ..............................
[2025-10-12 07:09:30] 2025-10-12 11:08:52,857 | INFO     | . Timing measurements:
[2025-10-12 07:09:30] 2025-10-12 11:08:52,858 | INFO     | . get job = 0 s
[2025-10-12 07:09:30] 2025-10-12 11:08:52,858 | INFO     | . initial setup = 2 s
[2025-10-12 07:09:30] 2025-10-12 11:08:52,858 | INFO     | . payload setup = 3 s
[2025-10-12 07:09:30] 2025-10-12 11:08:52,858 | INFO     | . stage-in = 0 s
[2025-10-12 07:09:30] 2025-10-12 11:08:52,858 | INFO     | . payload execution = 3249 s
[2025-10-12 07:09:30] 2025-10-12 11:08:52,858 | INFO     | . stage-out = 0 s
[2025-10-12 07:09:30] 2025-10-12 11:08:52,858 | INFO     | . log creation = 0 s
[2025-10-12 07:09:30] 2025-10-12 11:08:52,858 | INFO     | ..............................
[2025-10-12 07:09:30] 2025-10-12 11:08:53,310 | INFO     | 
[2025-10-12 07:09:30] 2025-10-12 11:08:53,311 | INFO     | job summary report
[2025-10-12 07:09:30] 2025-10-12 11:08:53,311 | INFO     | --------------------------------------------------
[2025-10-12 07:09:30] 2025-10-12 11:08:53,311 | INFO     | PanDA job id: 6839660532
[2025-10-12 07:09:30] 2025-10-12 11:08:53,311 | INFO     | task id: 46676269
[2025-10-12 07:09:30] 2025-10-12 11:08:53,311 | INFO     | errors: (none)
[2025-10-12 07:09:30] 2025-10-12 11:08:53,311 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:09:30] 2025-10-12 11:08:53,311 | INFO     | pilot state: finished 
[2025-10-12 07:09:30] 2025-10-12 11:08:53,312 | INFO     | transexitcode: 0
[2025-10-12 07:09:30] 2025-10-12 11:08:53,312 | INFO     | exeerrorcode: 0
[2025-10-12 07:09:30] 2025-10-12 11:08:53,312 | INFO     | exeerrordiag: 
[2025-10-12 07:09:30] 2025-10-12 11:08:53,312 | INFO     | exitcode: 0
[2025-10-12 07:09:30] 2025-10-12 11:08:53,312 | INFO     | exitmsg: OK
[2025-10-12 07:09:30] 2025-10-12 11:08:53,312 | INFO     | cpuconsumptiontime: 23595 s
[2025-10-12 07:09:30] 2025-10-12 11:08:53,312 | INFO     | nevents: 400
[2025-10-12 07:09:30] 2025-10-12 11:08:53,312 | INFO     | neventsw: 0
[2025-10-12 07:09:30] 2025-10-12 11:08:53,312 | INFO     | pid: 5472
[2025-10-12 07:09:30] 2025-10-12 11:08:53,313 | INFO     | pgrp: 5472
[2025-10-12 07:09:30] 2025-10-12 11:08:53,313 | INFO     | corecount: 8
[2025-10-12 07:09:30] 2025-10-12 11:08:53,313 | INFO     | event service: False
[2025-10-12 07:09:30] 2025-10-12 11:08:53,313 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 3256: 2374688, 3257: 2383742, 3260: 2383912}
[2025-10-12 07:09:30] 2025-10-12 11:08:53,313 | INFO     | --------------------------------------------------
[2025-10-12 07:09:30] 2025-10-12 11:08:53,313 | INFO     | 
[2025-10-12 07:09:30] 2025-10-12 11:08:53,313 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 07:09:30] 2025-10-12 11:08:53,336 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,336 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,336 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,337 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,337 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,337 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,337 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,337 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,337 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,337 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,338 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,338 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,338 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,338 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,338 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,338 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:09:30] 2025-10-12 11:08:53,338 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,338 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:09:30] 2025-10-12 11:08:53,339 | INFO     | job 6839660532 has completed (purged errors)
[2025-10-12 07:09:30] 2025-10-12 11:08:53,339 | INFO     | overall cleanup function is called
[2025-10-12 07:09:30] 2025-10-12 11:08:54,347 | INFO     | --- collectZombieJob: --- 10, [5472]
[2025-10-12 07:09:30] 2025-10-12 11:08:54,347 | INFO     | zombie collector waiting for pid 5472
[2025-10-12 07:09:30] 2025-10-12 11:08:54,347 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:09:30] 2025-10-12 11:08:54,347 | INFO     | collected zombie processes
[2025-10-12 07:09:30] 2025-10-12 11:08:54,347 | INFO     | will attempt to kill all subprocesses of pid=5472
[2025-10-12 07:09:30] 2025-10-12 11:08:54,451 | INFO     | process IDs to be killed: [5472] (in reverse order)
[2025-10-12 07:09:30] 2025-10-12 11:08:54,500 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:09:30] 2025-10-12 11:08:54,501 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:09:30] 2025-10-12 11:08:54,503 | INFO     | did not find any defunct processes belonging to 5472
[2025-10-12 07:09:30] 2025-10-12 11:08:54,505 | INFO     | did not find any defunct processes belonging to 5472
[2025-10-12 07:09:30] 2025-10-12 11:08:54,506 | INFO     | ready for new job
[2025-10-12 07:09:30] 2025-10-12 11:08:54,506 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:09:30] 2025-10-12 11:08:54,507 | INFO     | ***************************************
[2025-10-12 07:09:30] 2025-10-12 11:08:54,508 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:09:30] 2025-10-12 11:08:54,508 | INFO     | ***************************************
[2025-10-12 07:09:30] 2025-10-12 11:08:54,508 | INFO     | 
[2025-10-12 07:09:30] 2025-10-12 11:08:54,509 | INFO     | architecture information:
[2025-10-12 07:09:30] 2025-10-12 11:08:54,509 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:09:30] 2025-10-12 11:08:54,523 | INFO     | cat /etc/os-release:
[2025-10-12 07:09:30] NAME="CentOS Linux"
[2025-10-12 07:09:30] VERSION="7 (Core)"
[2025-10-12 07:09:30] ID="centos"
[2025-10-12 07:09:30] ID_LIKE="rhel fedora"
[2025-10-12 07:09:30] VERSION_ID="7"
[2025-10-12 07:09:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:09:30] ANSI_COLOR="0;31"
[2025-10-12 07:09:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:09:30] HOME_URL="https://www.centos.org/"
[2025-10-12 07:09:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:09:30] 
[2025-10-12 07:09:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:09:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:09:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:09:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:09:30] 
[2025-10-12 07:09:30] 2025-10-12 11:08:54,524 | INFO     | ***************************************
[2025-10-12 07:09:30] 2025-10-12 11:08:54,887 | WARNING  | process 5472 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 07:09:30] 2025-10-12 11:08:54,937 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 07:09:30] 2025-10-12 11:08:54,992 | INFO     | number of running child processes to parent process 5472: 1
[2025-10-12 07:09:30] 2025-10-12 11:08:54,992 | INFO     | maximum number of monitored processes: 6
[2025-10-12 07:09:30] 2025-10-12 11:08:54,992 | INFO     | aborting job monitoring since job object (job id=6839660532) has expired
[2025-10-12 07:09:30] 2025-10-12 11:08:55,027 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 07:09:30] 2025-10-12 11:08:55,044 | INFO     | sufficient remaining disk space (32416727040 B)
[2025-10-12 07:09:30] 2025-10-12 11:08:55,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:09:30] 2025-10-12 11:08:55,045 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:09:30] 2025-10-12 11:08:55,045 | INFO     | update_server=False
[2025-10-12 07:09:30] 2025-10-12 11:08:55,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:09:30] 2025-10-12 11:08:55,045 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:09:30] 2025-10-12 11:08:55,045 | INFO     | will abort loop
[2025-10-12 07:09:30] 2025-10-12 11:08:55,097 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:09:30] 2025-10-12 11:08:55,636 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:09:30] 2025-10-12 11:08:56,038 | INFO     | all job control threads have been joined
[2025-10-12 07:09:30] 2025-10-12 11:08:56,050 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:09:30] 2025-10-12 11:08:56,051 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:09:30] 2025-10-12 11:08:56,109 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:09:30] 2025-10-12 11:08:56,136 | INFO     | all data control threads have been joined
[2025-10-12 07:09:30] 2025-10-12 11:08:56,214 | INFO     | all payload control threads have been joined
[2025-10-12 07:09:30] 2025-10-12 11:08:56,291 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:09:30] 2025-10-12 11:08:56,799 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:09:30] 2025-10-12 11:08:57,043 | INFO     | [job] control thread has finished
[2025-10-12 07:09:30] 2025-10-12 11:08:57,100 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:09:30] 2025-10-12 11:08:57,130 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:09:30] 2025-10-12 11:08:57,137 | INFO     | [data] control thread has finished
[2025-10-12 07:09:30] 2025-10-12 11:08:57,220 | INFO     | [payload] control thread has finished
[2025-10-12 07:09:30] 2025-10-12 11:08:57,378 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:09:30] 2025-10-12 11:08:57,390 | INFO     | [job] validate thread has finished
[2025-10-12 07:09:30] 2025-10-12 11:08:57,502 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:09:30] 2025-10-12 11:08:57,947 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:09:30] 2025-10-12 11:08:58,951 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:09:30] 2025-10-12 11:08:59,642 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:09:30] 2025-10-12 11:09:05,524 | INFO     | job.realtimelogging is not enabled
[2025-10-12 07:09:30] 2025-10-12 11:09:06,529 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:09:30] 2025-10-12 11:09:23,561 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:09:30] 2025-10-12 11:09:24,930 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139795851835200)>', '<ExcThread(monitor, started 139795632887552)>']
[2025-10-12 07:09:30] 2025-10-12 11:09:25,598 | INFO     | PID=31333 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 07:09:30] 2025-10-12 11:09:25,598 | INFO     | .. there are 2 such processes running
[2025-10-12 07:09:30] 2025-10-12 11:09:25,598 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:09:30] 2025-10-12 11:09:25,598 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:09:30] 2025-10-12 11:09:25,598 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:09:30] 2025-10-12 11:09:25,598 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:09:30] 2025-10-12 11:09:25,598 | INFO     | [monitor] control thread has ended
[2025-10-12 07:09:30] 2025-10-12 11:09:29,956 | INFO     | all workflow threads have been joined
[2025-10-12 07:09:30] 2025-10-12 11:09:29,956 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:09:30] 2025-10-12 11:09:29,957 | INFO     | traces error code: 0
[2025-10-12 07:09:30] 2025-10-12 11:09:29,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:09:30] 2025-10-12 11:09:30,046 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:09:30] 2025-10-12 11:09:30,050 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:09:30] 2025-10-12 11:09:30,053 [wrapper] pilotpid: 31333
[2025-10-12 07:09:30] 2025-10-12 11:09:30,056 [wrapper] Pilot exit status: 0
[2025-10-12 07:09:30] 2025-10-12 11:09:30,067 [wrapper] pandaids: 6839660532
[2025-10-12 07:09:30] 2025-10-12 11:09:30,099 [wrapper] cleanup supervisor_pilot 26222 31334
[2025-10-12 07:09:30] 2025-10-12 11:09:30,102 [wrapper] Test setup, not cleaning
[2025-10-12 07:09:30] 2025-10-12 11:09:30,106 [wrapper] apfmon messages muted
[2025-10-12 07:09:30] 2025-10-12 11:09:30,109 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:09:30] 2025-10-12 11:09:30,112 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:09:30]  *** Error codes and diagnostics ***
[2025-10-12 07:09:30]     "exeErrorCode": 0,
[2025-10-12 07:09:30]     "exeErrorDiag": "",
[2025-10-12 07:09:30]     "pilotErrorCode": 0,
[2025-10-12 07:09:30]     "pilotErrorDiag": "",
[2025-10-12 07:09:30]  *** Listing of results directory ***
[2025-10-12 07:09:30] total 411680
[2025-10-12 07:09:30] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 02:54 pilot3.tar.gz
[2025-10-12 07:09:30] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 03:55 queuedata.json
[2025-10-12 07:09:30] -rwx------ 1 boincer umatlas     36292 Oct 12 03:56 runpilot2-wrapper.sh
[2025-10-12 07:09:30] -rw-r--r-- 1 boincer umatlas       100 Oct 12 06:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:09:30] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 06:14 run_atlas
[2025-10-12 07:09:30] -rw-r--r-- 1 boincer umatlas       105 Oct 12 06:14 job.xml
[2025-10-12 07:09:30] -rw-r--r-- 2 boincer umatlas 221961513 Oct 12 06:14 EVNT.46676267._003523.pool.root.1
[2025-10-12 07:09:30] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 06:14 start_atlas.sh
[2025-10-12 07:09:30] drwxrwx--x 2 boincer umatlas      4096 Oct 12 06:14 shared
[2025-10-12 07:09:30] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 06:14 input.tar.gz
[2025-10-12 07:09:30] -rw-r--r-- 1 boincer umatlas         0 Oct 12 06:14 boinc_lockfile
[2025-10-12 07:09:30] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 06:14 pandaJob.out
[2025-10-12 07:09:30] -rw------- 1 boincer umatlas    975536 Oct 12 06:14 agis_schedconf.cvmfs.json
[2025-10-12 07:09:30] -rw------- 1 boincer umatlas   1560580 Oct 12 06:14 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:09:30] drwx------ 5 boincer umatlas      4096 Oct 12 06:14 pilot3
[2025-10-12 07:09:30] -rw-r--r-- 1 boincer umatlas      6136 Oct 12 07:00 init_data.xml
[2025-10-12 07:09:30] -rw------- 1 boincer umatlas 194074604 Oct 12 07:08 HITS.46676269._074023.pool.root.1
[2025-10-12 07:09:30] -rw-r--r-- 1 boincer umatlas       529 Oct 12 07:08 boinc_task_state.xml
[2025-10-12 07:09:30] -rw------- 1 boincer umatlas      1057 Oct 12 07:08 memory_monitor_summary.json
[2025-10-12 07:09:30] -rw------- 1 boincer umatlas        95 Oct 12 07:08 pilot_heartbeat.json
[2025-10-12 07:09:30] -rw------- 1 boincer umatlas    305757 Oct 12 07:08 log.46676269._074023.job.log.tgz.1
[2025-10-12 07:09:30] -rw------- 1 boincer umatlas      7831 Oct 12 07:08 heartbeat.json
[2025-10-12 07:09:30] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 07:09 boinc_mmap_file
[2025-10-12 07:09:30] -rw-r--r-- 1 boincer umatlas        27 Oct 12 07:09 wrapper_checkpoint.txt
[2025-10-12 07:09:30] -rw------- 1 boincer umatlas      5408 Oct 12 07:09 pilotlog.txt
[2025-10-12 07:09:30] -rw------- 1 boincer umatlas    502945 Oct 12 07:09 log.46676269._074023.job.log.1
[2025-10-12 07:09:30] -rw------- 1 boincer umatlas       357 Oct 12 07:09 output.list
[2025-10-12 07:09:30] -rw-r--r-- 1 boincer umatlas       620 Oct 12 07:09 runtime_log
[2025-10-12 07:09:30] -rw------- 1 boincer umatlas    829440 Oct 12 07:09 result.tar.gz
[2025-10-12 07:09:30] -rw------- 1 boincer umatlas       657 Oct 12 07:09 k2rKDmI75R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmT6iNDmXbVkHo.diag
[2025-10-12 07:09:30] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 07:09 runtime_log.err
[2025-10-12 07:09:30] -rw-r--r-- 1 boincer umatlas     21691 Oct 12 07:09 stderr.txt
[2025-10-12 07:09:30] HITS file was successfully produced:
[2025-10-12 07:09:30] -rw------- 1 boincer umatlas 194074604 Oct 12 07:08 shared/HITS.pool.root.1
[2025-10-12 07:09:30]  *** Contents of shared directory: ***
[2025-10-12 07:09:30] total 407684
[2025-10-12 07:09:30] -rw-r--r-- 2 boincer umatlas 221961513 Oct 12 06:14 ATLAS.root_0
[2025-10-12 07:09:30] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 06:14 start_atlas.sh
[2025-10-12 07:09:30] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 06:14 input.tar.gz
[2025-10-12 07:09:30] -rw------- 1 boincer umatlas 194074604 Oct 12 07:08 HITS.pool.root.1
[2025-10-12 07:09:30] -rw------- 1 boincer umatlas    829440 Oct 12 07:09 result.tar.gz
07:09:31 (27667): run_atlas exited; CPU time 23551.286580
07:09:31 (27667): called boinc_finish(0)

</stderr_txt>
]]>

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