Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:12:56 (3218392): wrapper (7.7.26015): starting
21:12:56 (3218392): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 21:12:56] Arguments: --nthreads 3
[2025-10-12 21:12:56] Threads: 3
[2025-10-12 21:12:56] Checking for CVMFS
[2025-10-12 21:12:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:12:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:12:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:12:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:12:56] 2.9.2.0 1825770 4632 84424 151633 3 56 30236488 36864001 0 130560 0 3612093 99.991 161311 900 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 21:12:56] CVMFS is ok
[2025-10-12 21:12:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:12:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:12:56] Further information can be found at the LHC@home message board.
[2025-10-12 21:12:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:12:56] Checking for apptainer binary...
[2025-10-12 21:12:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:12:56] Running /usr/bin/apptainer --version
[2025-10-12 21:12:56] apptainer version 1.4.1-1.1
[2025-10-12 21:12:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:12:56] magicA246a
[2025-10-12 21:12:56] apptainer works
[2025-10-12 21:12:56] Set ATHENA_PROC_NUMBER=3
[2025-10-12 21:12:56] Set ATHENA_CORE_NUMBER=3
[2025-10-12 21:12:56] Starting ATLAS job with PandaID=6839660301
[2025-10-12 21:12:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:40:26]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:40:26] 2025-10-12 20:39:55,465 | INFO     | did not find any defunct processes belonging to 3228551
[2025-10-12 22:40:26] 2025-10-12 20:39:55,465 | INFO     | ready for new job
[2025-10-12 22:40:26] 2025-10-12 20:39:55,465 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:40:26] 2025-10-12 20:39:55,466 | INFO     | ***************************************
[2025-10-12 22:40:26] 2025-10-12 20:39:55,466 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:40:26] 2025-10-12 20:39:55,466 | INFO     | ***************************************
[2025-10-12 22:40:26] 2025-10-12 20:39:55,466 | INFO     | 
[2025-10-12 22:40:26] 2025-10-12 20:39:55,466 | INFO     | architecture information:
[2025-10-12 22:40:26] 2025-10-12 20:39:55,466 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:40:26] 2025-10-12 20:39:55,476 | INFO     | cat /etc/os-release:
[2025-10-12 22:40:26] NAME="CentOS Linux"
[2025-10-12 22:40:26] VERSION="7 (Core)"
[2025-10-12 22:40:26] ID="centos"
[2025-10-12 22:40:26] ID_LIKE="rhel fedora"
[2025-10-12 22:40:26] VERSION_ID="7"
[2025-10-12 22:40:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:40:26] ANSI_COLOR="0;31"
[2025-10-12 22:40:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:40:26] HOME_URL="https://www.centos.org/"
[2025-10-12 22:40:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:40:26] 
[2025-10-12 22:40:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:40:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:40:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:40:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:40:26] 
[2025-10-12 22:40:26] 2025-10-12 20:39:55,476 | INFO     | ***************************************
[2025-10-12 22:40:26] 2025-10-12 20:39:55,980 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 22:40:26] 2025-10-12 20:39:55,993 | INFO     | sufficient remaining disk space (274300141568 B)
[2025-10-12 22:40:26] 2025-10-12 20:39:55,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:40:26] 2025-10-12 20:39:55,994 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:40:26] 2025-10-12 20:39:55,994 | INFO     | update_server=False
[2025-10-12 22:40:26] 2025-10-12 20:39:55,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:40:26] 2025-10-12 20:39:55,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:40:26] 2025-10-12 20:39:55,994 | INFO     | aborting loop
[2025-10-12 22:40:26] 2025-10-12 20:39:55,994 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:40:26] 2025-10-12 20:39:56,363 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:40:26] 2025-10-12 20:39:56,673 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:40:26] 2025-10-12 20:39:56,877 | INFO     | all data control threads have been joined
[2025-10-12 22:40:26] 2025-10-12 20:39:56,999 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:40:26] 2025-10-12 20:39:57,000 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:40:26] 2025-10-12 20:39:57,000 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:40:26] 2025-10-12 20:39:57,118 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:40:26] 2025-10-12 20:39:57,388 | INFO     | all job control threads have been joined
[2025-10-12 22:40:26] 2025-10-12 20:39:57,446 | INFO     | all payload control threads have been joined
[2025-10-12 22:40:26] 2025-10-12 20:39:57,522 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:40:26] 2025-10-12 20:39:57,632 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:40:26] 2025-10-12 20:39:57,883 | INFO     | [data] control thread has finished
[2025-10-12 22:40:26] 2025-10-12 20:39:58,237 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:40:26] 2025-10-12 20:39:58,369 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:40:26] 2025-10-12 20:39:58,373 | INFO     | [job] validate thread has finished
[2025-10-12 22:40:26] 2025-10-12 20:39:58,394 | INFO     | [job] control thread has finished
[2025-10-12 22:40:26] 2025-10-12 20:39:58,437 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:40:26] 2025-10-12 20:39:58,451 | INFO     | [payload] control thread has finished
[2025-10-12 22:40:26] 2025-10-12 20:39:58,457 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:40:26] 2025-10-12 20:39:58,485 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:40:26] 2025-10-12 20:40:00,681 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:40:26] 2025-10-12 20:40:09,219 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:40:26] 2025-10-12 20:40:09,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140651807213376)>', '<ExcThread(monitor, started 140651144390400)>']
[2025-10-12 22:40:26] 2025-10-12 20:40:14,533 | INFO     | all workflow threads have been joined
[2025-10-12 22:40:26] 2025-10-12 20:40:14,534 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:40:26] 2025-10-12 20:40:14,534 | INFO     | traces error code: 0
[2025-10-12 22:40:26] 2025-10-12 20:40:14,534 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:40:26] 2025-10-12 20:40:26,622 | INFO     | PID=3222114 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:40:26] 2025-10-12 20:40:26,622 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:40:26] 2025-10-12 20:40:26,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:40:26] 2025-10-12 20:40:26,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:40:26] 2025-10-12 20:40:26,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:40:26] 2025-10-12 20:40:26,622 | INFO     | [monitor] control thread has ended
[2025-10-12 22:40:26] 2025-10-12 20:40:26,674 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:40:26] 2025-10-12 20:40:26,677 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:40:26] 2025-10-12 20:40:26,679 [wrapper] pilotpid: 3222114
[2025-10-12 22:40:26] 2025-10-12 20:40:26,682 [wrapper] Pilot exit status: 0
[2025-10-12 22:40:26] 2025-10-12 20:40:26,689 [wrapper] pandaids: 6839660301
[2025-10-12 22:40:26] 2025-10-12 20:40:26,708 [wrapper] cleanup supervisor_pilot 3240779 3222115
[2025-10-12 22:40:26] 2025-10-12 20:40:26,710 [wrapper] Test setup, not cleaning
[2025-10-12 22:40:26] 2025-10-12 20:40:26,713 [wrapper] apfmon messages muted
[2025-10-12 22:40:26] 2025-10-12 20:40:26,715 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:40:26] 2025-10-12 20:40:26,718 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:40:26]  *** Error codes and diagnostics ***
[2025-10-12 22:40:26]     "exeErrorCode": 0,
[2025-10-12 22:40:26]     "exeErrorDiag": "",
[2025-10-12 22:40:26]     "pilotErrorCode": 0,
[2025-10-12 22:40:26]     "pilotErrorDiag": "",
[2025-10-12 22:40:26]  *** Listing of results directory ***
[2025-10-12 22:40:26] total 417920
[2025-10-12 22:40:26] -rw-r--r-- 1 boinc boinc    557409 Oct 12 08:54 pilot3.tar.gz
[2025-10-12 22:40:26] -rw-r--r-- 1 boinc boinc      5112 Oct 12 09:55 queuedata.json
[2025-10-12 22:40:26] -rwx------ 1 boinc boinc     36292 Oct 12 09:56 runpilot2-wrapper.sh
[2025-10-12 22:40:26] -rw-r--r-- 1 boinc boinc       100 Oct 12 21:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:40:26] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 21:12 run_atlas
[2025-10-12 22:40:26] -rw-r--r-- 1 boinc boinc       105 Oct 12 21:12 job.xml
[2025-10-12 22:40:26] -rw-r--r-- 2 boinc boinc 223229947 Oct 12 21:12 EVNT.46676267._003522.pool.root.1
[2025-10-12 22:40:26] drwxrwx--x 2 boinc boinc      4096 Oct 12 21:12 shared
[2025-10-12 22:40:26] -rw-r--r-- 2 boinc boinc    569682 Oct 12 21:12 input.tar.gz
[2025-10-12 22:40:26] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:12 start_atlas.sh
[2025-10-12 22:40:26] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:12 boinc_setup_complete
[2025-10-12 22:40:26] -rw-r--r-- 1 boinc boinc      6449 Oct 12 21:12 init_data.xml
[2025-10-12 22:40:26] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:12 boinc_lockfile
[2025-10-12 22:40:26] -rw-r--r-- 1 boinc boinc      2550 Oct 12 21:12 pandaJob.out
[2025-10-12 22:40:26] -rw------- 1 boinc boinc    975528 Oct 12 21:13 agis_schedconf.cvmfs.json
[2025-10-12 22:40:26] -rw------- 1 boinc boinc   1560580 Oct 12 21:13 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:40:26] drwx------ 5 boinc boinc      4096 Oct 12 21:13 pilot3
[2025-10-12 22:40:26] -rw------- 1 boinc boinc 198800085 Oct 12 22:39 HITS.46676269._073994.pool.root.1
[2025-10-12 22:40:26] -rw------- 1 boinc boinc        95 Oct 12 22:39 pilot_heartbeat.json
[2025-10-12 22:40:26] -rw-r--r-- 1 boinc boinc       529 Oct 12 22:39 boinc_task_state.xml
[2025-10-12 22:40:26] -rw------- 1 boinc boinc      1013 Oct 12 22:39 memory_monitor_summary.json
[2025-10-12 22:40:26] -rw------- 1 boinc boinc    249123 Oct 12 22:39 log.46676269._073994.job.log.tgz.1
[2025-10-12 22:40:26] -rw------- 1 boinc boinc      7750 Oct 12 22:39 heartbeat.json
[2025-10-12 22:40:26] -rw-r--r-- 1 boinc boinc        27 Oct 12 22:40 wrapper_checkpoint.txt
[2025-10-12 22:40:26] -rw-r--r-- 1 boinc boinc      8192 Oct 12 22:40 boinc_mmap_file
[2025-10-12 22:40:26] -rw------- 1 boinc boinc       747 Oct 12 22:40 pilotlog.txt
[2025-10-12 22:40:26] -rw------- 1 boinc boinc    762404 Oct 12 22:40 log.46676269._073994.job.log.1
[2025-10-12 22:40:26] -rw------- 1 boinc boinc       357 Oct 12 22:40 output.list
[2025-10-12 22:40:26] -rw-r--r-- 1 boinc boinc       620 Oct 12 22:40 runtime_log
[2025-10-12 22:40:26] -rw------- 1 boinc boinc   1034240 Oct 12 22:40 result.tar.gz
[2025-10-12 22:40:26] -rw------- 1 boinc boinc       662 Oct 12 22:40 xXYKDmI75R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmE6iNDmeHF9Wm.diag
[2025-10-12 22:40:26] -rw-r--r-- 1 boinc boinc      8797 Oct 12 22:40 runtime_log.err
[2025-10-12 22:40:26] -rw-r--r-- 1 boinc boinc      9644 Oct 12 22:40 stderr.txt
[2025-10-12 22:40:26] HITS file was successfully produced:
[2025-10-12 22:40:26] -rw------- 1 boinc boinc 198800085 Oct 12 22:39 shared/HITS.pool.root.1
[2025-10-12 22:40:26]  *** Contents of shared directory: ***
[2025-10-12 22:40:26] total 413740
[2025-10-12 22:40:26] -rw-r--r-- 2 boinc boinc 223229947 Oct 12 21:12 ATLAS.root_0
[2025-10-12 22:40:26] -rw-r--r-- 2 boinc boinc    569682 Oct 12 21:12 input.tar.gz
[2025-10-12 22:40:26] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:12 start_atlas.sh
[2025-10-12 22:40:26] -rw------- 1 boinc boinc 198800085 Oct 12 22:39 HITS.pool.root.1
[2025-10-12 22:40:26] -rw------- 1 boinc boinc   1034240 Oct 12 22:40 result.tar.gz
22:40:28 (3218392): run_atlas exited; CPU time 14936.412552
22:40:28 (3218392): called boinc_finish(0)

</stderr_txt>
]]>

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