Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:40:31 (3243610): wrapper (7.7.26015): starting
22:40:31 (3243610): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 22:40:31] Arguments: --nthreads 3
[2025-10-12 22:40:31] Threads: 3
[2025-10-12 22:40:31] Checking for CVMFS
[2025-10-12 22:40:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 22:40:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 22:40:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 22:40:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 22:40:31] 2.9.2.0 1825770 4719 84012 151636 0 56 30246802 36864000 0 130560 0 3677820 99.991 165268 908 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 22:40:31] CVMFS is ok
[2025-10-12 22:40:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 22:40:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 22:40:31] Further information can be found at the LHC@home message board.
[2025-10-12 22:40:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 22:40:31] Checking for apptainer binary...
[2025-10-12 22:40:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 22:40:31] Running /usr/bin/apptainer --version
[2025-10-12 22:40:31] apptainer version 1.4.1-1.1
[2025-10-12 22:40:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 22:40:31] magicA246a
[2025-10-12 22:40:31] apptainer works
[2025-10-12 22:40:31] Set ATHENA_PROC_NUMBER=3
[2025-10-12 22:40:31] Set ATHENA_CORE_NUMBER=3
[2025-10-12 22:40:31] Starting ATLAS job with PandaID=6839660280
[2025-10-12 22:40:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:04:48]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:04:48] 2025-10-12 22:03:59,061 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:04:48] 2025-10-12 22:03:59,152 | INFO     | [payload] control thread has finished
[2025-10-13 00:04:48] 2025-10-12 22:03:59,232 | INFO     | [data] control thread has finished
[2025-10-13 00:04:48] 2025-10-12 22:03:59,306 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:04:48] 2025-10-12 22:03:59,462 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:04:48] 2025-10-12 22:03:59,497 | INFO     | [job] validate thread has finished
[2025-10-13 00:04:48] 2025-10-12 22:03:59,499 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:04:48] 2025-10-12 22:03:59,527 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:04:48] 2025-10-12 22:03:59,544 | INFO     | [job] control thread has finished
[2025-10-13 00:04:48] 2025-10-12 22:03:59,597 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:04:48] 2025-10-12 22:03:59,702 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:04:48] 2025-10-12 22:04:03,506 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:04:48] 2025-10-12 22:04:27,439 | INFO     | PID=3247338 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:04:48] 2025-10-12 22:04:27,439 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:04:48] 2025-10-12 22:04:27,439 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:04:48] 2025-10-12 22:04:27,439 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:04:48] 2025-10-12 22:04:43,624 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:04:48] 2025-10-12 22:04:43,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140667308906304)>', '<ExcThread(monitor, started 140666671716096)>']
[2025-10-13 00:04:48] 2025-10-12 22:04:44,526 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:04:48] 2025-10-12 22:04:44,526 | INFO     | [monitor] control thread has ended
[2025-10-13 00:04:48] 2025-10-12 22:04:48,703 | INFO     | all workflow threads have been joined
[2025-10-13 00:04:48] 2025-10-12 22:04:48,704 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:04:48] 2025-10-12 22:04:48,704 | INFO     | traces error code: 0
[2025-10-13 00:04:48] 2025-10-12 22:04:48,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:04:48] 2025-10-12 22:04:48,760 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:04:48] 2025-10-12 22:04:48,763 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:04:48] 2025-10-12 22:04:48,765 [wrapper] pilotpid: 3247338
[2025-10-13 00:04:48] 2025-10-12 22:04:48,768 [wrapper] Pilot exit status: 0
[2025-10-13 00:04:48] 2025-10-12 22:04:48,776 [wrapper] pandaids: 6839660280
[2025-10-13 00:04:48] 2025-10-12 22:04:48,795 [wrapper] cleanup supervisor_pilot 3265981 3247339
[2025-10-13 00:04:48] 2025-10-12 22:04:48,798 [wrapper] Test setup, not cleaning
[2025-10-13 00:04:48] 2025-10-12 22:04:48,800 [wrapper] apfmon messages muted
[2025-10-13 00:04:48] 2025-10-12 22:04:48,803 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:04:48] 2025-10-12 22:04:48,805 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:04:48]  *** Error codes and diagnostics ***
[2025-10-13 00:04:48]     "exeErrorCode": 0,
[2025-10-13 00:04:48]     "exeErrorDiag": "",
[2025-10-13 00:04:48]     "pilotErrorCode": 0,
[2025-10-13 00:04:48]     "pilotErrorDiag": "",
[2025-10-13 00:04:48]  *** Listing of results directory ***
[2025-10-13 00:04:48] total 410712
[2025-10-13 00:04:48] -rw-r--r-- 1 boinc boinc    557409 Oct 12 08:54 pilot3.tar.gz
[2025-10-13 00:04:48] -rw-r--r-- 1 boinc boinc      5112 Oct 12 09:55 queuedata.json
[2025-10-13 00:04:48] -rwx------ 1 boinc boinc     36292 Oct 12 09:56 runpilot2-wrapper.sh
[2025-10-13 00:04:48] -rw-r--r-- 1 boinc boinc       100 Oct 12 22:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:04:48] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 22:40 run_atlas
[2025-10-13 00:04:48] -rw-r--r-- 1 boinc boinc       105 Oct 12 22:40 job.xml
[2025-10-13 00:04:48] -rw-r--r-- 2 boinc boinc 220451283 Oct 12 22:40 EVNT.46676267._003521.pool.root.1
[2025-10-13 00:04:48] -rw-r--r-- 2 boinc boinc    569682 Oct 12 22:40 input.tar.gz
[2025-10-13 00:04:48] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:40 start_atlas.sh
[2025-10-13 00:04:48] drwxrwx--x 2 boinc boinc      4096 Oct 12 22:40 shared
[2025-10-13 00:04:48] -rw-r--r-- 1 boinc boinc         0 Oct 12 22:40 boinc_setup_complete
[2025-10-13 00:04:48] -rw-r--r-- 1 boinc boinc      6449 Oct 12 22:40 init_data.xml
[2025-10-13 00:04:48] -rw-r--r-- 1 boinc boinc         0 Oct 12 22:40 boinc_lockfile
[2025-10-13 00:04:48] -rw-r--r-- 1 boinc boinc      2550 Oct 12 22:40 pandaJob.out
[2025-10-13 00:04:48] -rw------- 1 boinc boinc    975536 Oct 12 22:40 agis_schedconf.cvmfs.json
[2025-10-13 00:04:48] -rw------- 1 boinc boinc   1560580 Oct 12 22:40 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:04:48] drwx------ 5 boinc boinc      4096 Oct 12 22:40 pilot3
[2025-10-13 00:04:48] -rw------- 1 boinc boinc 194254601 Oct 13 00:03 HITS.46676269._073973.pool.root.1
[2025-10-13 00:04:48] -rw-r--r-- 1 boinc boinc       529 Oct 13 00:03 boinc_task_state.xml
[2025-10-13 00:04:48] -rw------- 1 boinc boinc      1018 Oct 13 00:03 memory_monitor_summary.json
[2025-10-13 00:04:48] -rw------- 1 boinc boinc    251188 Oct 13 00:03 log.46676269._073973.job.log.tgz.1
[2025-10-13 00:04:48] -rw------- 1 boinc boinc      7758 Oct 13 00:03 heartbeat.json
[2025-10-13 00:04:48] -rw-r--r-- 1 boinc boinc      8192 Oct 13 00:04 boinc_mmap_file
[2025-10-13 00:04:48] -rw-r--r-- 1 boinc boinc        27 Oct 13 00:04 wrapper_checkpoint.txt
[2025-10-13 00:04:48] -rw------- 1 boinc boinc        95 Oct 13 00:04 pilot_heartbeat.json
[2025-10-13 00:04:48] -rw------- 1 boinc boinc      4752 Oct 13 00:04 pilotlog.txt
[2025-10-13 00:04:48] -rw------- 1 boinc boinc    733593 Oct 13 00:04 log.46676269._073973.job.log.1
[2025-10-13 00:04:48] -rw------- 1 boinc boinc       357 Oct 13 00:04 output.list
[2025-10-13 00:04:48] -rw-r--r-- 1 boinc boinc       620 Oct 13 00:04 runtime_log
[2025-10-13 00:04:48] -rw------- 1 boinc boinc   1003520 Oct 13 00:04 result.tar.gz
[2025-10-13 00:04:48] -rw-r--r-- 1 boinc boinc      8797 Oct 13 00:04 runtime_log.err
[2025-10-13 00:04:48] -rw------- 1 boinc boinc       662 Oct 13 00:04 J0MKDmI75R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm55iNDmhG6uUm.diag
[2025-10-13 00:04:48] -rw-r--r-- 1 boinc boinc      5930 Oct 13 00:04 stderr.txt
[2025-10-13 00:04:48] HITS file was successfully produced:
[2025-10-13 00:04:48] -rw------- 1 boinc boinc 194254601 Oct 13 00:03 shared/HITS.pool.root.1
[2025-10-13 00:04:48]  *** Contents of shared directory: ***
[2025-10-13 00:04:48] total 406556
[2025-10-13 00:04:48] -rw-r--r-- 2 boinc boinc 220451283 Oct 12 22:40 ATLAS.root_0
[2025-10-13 00:04:48] -rw-r--r-- 2 boinc boinc    569682 Oct 12 22:40 input.tar.gz
[2025-10-13 00:04:48] -rw-r--r-- 2 boinc boinc     15120 Oct 12 22:40 start_atlas.sh
[2025-10-13 00:04:48] -rw------- 1 boinc boinc 194254601 Oct 13 00:03 HITS.pool.root.1
[2025-10-13 00:04:48] -rw------- 1 boinc boinc   1003520 Oct 13 00:04 result.tar.gz
00:04:50 (3243610): run_atlas exited; CPU time 14309.904039
00:04:50 (3243610): called boinc_finish(0)

</stderr_txt>
]]>

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