Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:16:15 (1906513): wrapper (7.7.26015): starting
06:16:15 (1906513): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 06:16:15] Arguments: --nthreads 8
[2025-10-12 06:16:15] Threads: 8
[2025-10-12 06:16:15] Checking for CVMFS
[2025-10-12 06:16:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:16:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:16:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:16:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:16:18] 2.13.2.0 135553 4061 94720 151617 1 312 24749222 32503809 49904 16776704 0 63444587 99.951 8832532 42969 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 06:16:18] CVMFS is ok
[2025-10-12 06:16:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:16:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:16:18] Further information can be found at the LHC@home message board.
[2025-10-12 06:16:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:16:18] Checking for apptainer binary...
[2025-10-12 06:16:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:16:18] Running /usr/bin/apptainer --version
[2025-10-12 06:16:19] apptainer version 1.4.3-1.el9
[2025-10-12 06:16:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:16:19] c8-7-2.aglt2.org
[2025-10-12 06:16:19] apptainer works
[2025-10-12 06:16:19] Set ATHENA_PROC_NUMBER=8
[2025-10-12 06:16:19] Set ATHENA_CORE_NUMBER=8
[2025-10-12 06:16:19] Starting ATLAS job with PandaID=6838990252
[2025-10-12 06:16:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:25:12]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:25:12] 2025-10-12 12:00:34,595 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:25:12] 2025-10-12 12:00:35,339 | INFO     | time since job start (6164s) is within the limit (172800.0s)
[2025-10-12 08:25:12] 2025-10-12 12:00:37,099 | INFO     | monitor loop #385: job 0:6838990252 is in state 'finished'
[2025-10-12 08:25:12] 2025-10-12 12:00:37,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:25:12] 2025-10-12 12:00:37,355 | INFO     | time since job start (6166s) is within the limit (172800.0s)
[2025-10-12 08:25:12] 2025-10-12 12:00:39,363 | INFO     | time since job start (6168s) is within the limit (172800.0s)
[2025-10-12 08:25:12] 2025-10-12 12:00:39,604 | INFO     | monitor loop #386: job 0:6838990252 is in state 'finished'
[2025-10-12 08:25:12] 2025-10-12 12:00:39,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:25:12] 2025-10-12 12:00:41,370 | INFO     | time since job start (6170s) is within the limit (172800.0s)
[2025-10-12 08:25:12] 2025-10-12 12:00:42,113 | INFO     | monitor loop #387: job 0:6838990252 is in state 'finished'
[2025-10-12 08:25:12] 2025-10-12 12:00:42,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:25:12] 2025-10-12 12:00:43,378 | INFO     | time since job start (6172s) is within the limit (172800.0s)
[2025-10-12 08:25:12] 2025-10-12 12:00:44,632 | INFO     | monitor loop #388: job 0:6838990252 is in state 'finished'
[2025-10-12 08:25:12] 2025-10-12 12:00:44,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:25:12] 2025-10-12 12:00:45,408 | INFO     | time since job start (6174s) is within the limit (172800.0s)
[2025-10-12 08:25:12] 2025-10-12 12:00:47,139 | INFO     | monitor loop #389: job 0:6838990252 is in state 'finished'
[2025-10-12 08:25:12] 2025-10-12 12:00:47,140 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:25:12] 2025-10-12 12:00:47,415 | INFO     | time since job start (6176s) is within the limit (172800.0s)
[2025-10-12 08:25:12] 2025-10-12 12:00:49,434 | INFO     | time since job start (6178s) is within the limit (172800.0s)
[2025-10-12 08:25:12] 2025-10-12 12:00:49,644 | INFO     | monitor loop #390: job 0:6838990252 is in state 'finished'
[2025-10-12 08:25:12] 2025-10-12 12:00:49,645 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:25:12] 2025-10-12 12:00:51,440 | INFO     | time since job start (6180s) is within the limit (172800.0s)
[2025-10-12 08:25:12] 2025-10-12 12:00:52,149 | INFO     | monitor loop #391: job 0:6838990252 is in state 'finished'
[2025-10-12 08:25:12] 2025-10-12 12:00:52,150 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:25:12] 2025-10-12 12:00:53,446 | INFO     | time since job start (6182s) is within the limit (172800.0s)
[2025-10-12 08:25:12] 2025-10-12 12:00:54,654 | INFO     | monitor loop #392: job 0:6838990252 is in state 'finished'
[2025-10-12 08:25:12] 2025-10-12 12:00:54,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:25:12] 2025-10-12 12:00:56,709 | INFO     | PID=1928600 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 08:25:12] 2025-10-12 12:00:56,709 | INFO     | .. there are 56 such processes running
[2025-10-12 08:25:12] 2025-10-12 12:00:57,174 | INFO     | monitor loop #393: job 0:6838990252 is in state 'finished'
[2025-10-12 08:25:12] 2025-10-12 12:00:57,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:25:12] 2025-10-12 12:00:57,709 | INFO     | time since job start (6186s) is within the limit (172800.0s)
[2025-10-12 08:25:12] 2025-10-12 12:00:59,686 | INFO     | monitor loop #394: job 0:6838990252 is in state 'finished'
[2025-10-12 08:25:12] 2025-10-12 12:00:59,687 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:25:12] 2025-10-12 12:00:59,718 | INFO     | time since job start (6188s) is within the limit (172800.0s)
[2025-10-12 08:25:12] 2025-10-12 12:01:01,726 | INFO     | time since job start (6190s) is within the limit (172800.0s)
[2025-10-12 08:25:12] 2025-10-12 12:01:01,959 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 08:25:12] 2025-10-12 12:01:01,967 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.479484375001
[2025-10-12 08:25:12] 2025-10-12 12:01:02,013 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6838990252/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:25:12] 2025-10-12 12:01:02,014 | INFO     | extracted standard info from prmon json
[2025-10-12 08:25:12] 2025-10-12 12:01:02,014 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:25:12] 2025-10-12 12:01:02,014 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:25:12] 2025-10-12 12:01:02,014 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:25:12] 2025-10-12 12:01:02,014 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:25:12] 2025-10-12 12:01:02,025 | INFO     | fitting pss+swap vs Time
[2025-10-12 08:25:12] 2025-10-12 12:01:02,025 | INFO     | sum of square deviations: 241442034.11956495
[2025-10-12 08:25:12] 2025-10-12 12:01:02,025 | INFO     | sum of deviations: -2031170893.902175
[2025-10-12 08:25:12] 2025-10-12 12:01:02,025 | INFO     | mean x: 1760267518.597826
[2025-10-12 08:25:12] 2025-10-12 12:01:02,025 | INFO     | mean y: 2511179.4891304346
[2025-10-12 08:25:12] 2025-10-12 12:01:02,025 | INFO     | -- intersect: 14811051715.089188
[2025-10-12 08:25:12] 2025-10-12 12:01:02,025 | INFO     | intersect: 14811051715.089188
[2025-10-12 08:25:12] 2025-10-12 12:01:02,025 | INFO     | chi2: 0.11319683557530583
[2025-10-12 08:25:12] 2025-10-12 12:01:02,025 | INFO     | -- intersect: 14811051715.089188
[2025-10-12 08:25:12] 2025-10-12 12:01:02,025 | INFO     | current memory leak: -8.41 B/s (using 92 data points, chi2=0.11)
[2025-10-12 08:25:12] 2025-10-12 12:01:02,026 | INFO     | could have reported an average CPU frequency of 3793 MHz (7 samples)
[2025-10-12 08:25:12] 2025-10-12 12:01:02,026 | INFO     | ..............................
[2025-10-12 08:25:12] 2025-10-12 12:01:02,026 | INFO     | . Timing measurements:
[2025-10-12 08:25:12] 2025-10-12 12:01:02,026 | INFO     | . get job = 0 s
[2025-10-12 08:25:12] 2025-10-12 12:01:02,026 | INFO     | . initial setup = 6 s
[2025-10-12 08:25:12] 2025-10-12 12:01:02,026 | INFO     | . payload setup = 43 s
[2025-10-12 08:25:12] 2025-10-12 12:01:02,026 | INFO     | . stage-in = 0 s
[2025-10-12 08:25:12] 2025-10-12 12:01:02,026 | INFO     | . payload execution = 6019 s
[2025-10-12 08:25:12] 2025-10-12 12:01:02,026 | INFO     | . stage-out = 2 s
[2025-10-12 08:25:12] 2025-10-12 12:01:02,026 | INFO     | . log creation = 1 s
[2025-10-12 08:25:12] 2025-10-12 12:01:02,026 | INFO     | ..............................
[2025-10-12 08:25:12] 2025-10-12 12:01:02,195 | INFO     | 
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | job summary report
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | --------------------------------------------------
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | PanDA job id: 6838990252
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | task id: 46676269
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | errors: (none)
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | pilot state: finished 
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | transexitcode: 0
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | exeerrorcode: 0
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | exeerrordiag: 
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | exitcode: 0
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | exitmsg: OK
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | cpuconsumptiontime: 22654 s
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | nevents: 400
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | neventsw: 0
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | pid: 1958351
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | pgrp: 1958351
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | corecount: 8
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | event service: False
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | sizes: {0: 2348029, 1: 2348885, 12: 2348885, 23: 2348913, 34: 2348941, 43: 2349231, 45: 2349387, 6067: 2376145, 6068: 2376144, 6070: 2385198, 6071: 2385254, 6105: 
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | --------------------------------------------------
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | 
[2025-10-12 08:25:12] 2025-10-12 12:01:02,196 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 08:25:12] 2025-10-12 12:01:02,240 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,240 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,240 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,240 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,240 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,240 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,241 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,241 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,241 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,241 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,241 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,241 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,241 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,241 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,241 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,241 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,241 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,241 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:25:12] 2025-10-12 12:01:02,241 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,241 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:25:12] 2025-10-12 12:01:02,241 | INFO     | job 6838990252 has completed (purged errors)
[2025-10-12 08:25:12] 2025-10-12 12:01:02,241 | INFO     | overall cleanup function is called
[2025-10-12 08:25:12] 2025-10-12 12:01:03,265 | INFO     | --- collectZombieJob: --- 10, [1958351]
[2025-10-12 08:25:12] 2025-10-12 12:01:03,267 | INFO     | zombie collector waiting for pid 1958351
[2025-10-12 08:25:12] 2025-10-12 12:01:03,267 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:25:12] 2025-10-12 12:01:03,267 | INFO     | collected zombie processes
[2025-10-12 08:25:12] 2025-10-12 12:01:03,267 | INFO     | will attempt to kill all subprocesses of pid=1958351
[2025-10-12 08:25:12] 2025-10-12 12:01:06,872 | INFO     | process IDs to be killed: [1958351] (in reverse order)
[2025-10-12 08:25:12] 2025-10-12 12:01:07,245 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:25:12] 2025-10-12 12:01:07,246 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:25:12] 2025-10-12 12:01:08,017 | INFO     | did not find any defunct processes belonging to 1958351
[2025-10-12 08:25:12] 2025-10-12 12:01:08,436 | INFO     | did not find any defunct processes belonging to 1958351
[2025-10-12 08:25:12] 2025-10-12 12:01:08,437 | INFO     | ready for new job
[2025-10-12 08:25:12] 2025-10-12 12:01:08,437 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:25:12] 2025-10-12 12:01:08,438 | INFO     | ***************************************
[2025-10-12 08:25:12] 2025-10-12 12:01:08,438 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:25:12] 2025-10-12 12:01:08,438 | INFO     | ***************************************
[2025-10-12 08:25:12] 2025-10-12 12:01:08,438 | INFO     | 
[2025-10-12 08:25:12] 2025-10-12 12:01:08,465 | INFO     | architecture information:
[2025-10-12 08:25:12] 2025-10-12 12:01:08,466 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:25:12] 2025-10-12 12:01:08,524 | INFO     | cat /etc/os-release:
[2025-10-12 08:25:12] NAME="CentOS Linux"
[2025-10-12 08:25:12] VERSION="7 (Core)"
[2025-10-12 08:25:12] ID="centos"
[2025-10-12 08:25:12] ID_LIKE="rhel fedora"
[2025-10-12 08:25:12] VERSION_ID="7"
[2025-10-12 08:25:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:25:12] ANSI_COLOR="0;31"
[2025-10-12 08:25:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:25:12] HOME_URL="https://www.centos.org/"
[2025-10-12 08:25:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:25:12] 
[2025-10-12 08:25:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:25:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:25:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:25:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:25:12] 
[2025-10-12 08:25:12] 2025-10-12 12:01:08,524 | INFO     | ***************************************
[2025-10-12 08:25:12] 2025-10-12 12:01:09,033 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 08:25:12] 2025-10-12 12:01:09,061 | INFO     | sufficient remaining disk space (92219113472 B)
[2025-10-12 08:25:12] 2025-10-12 12:01:09,061 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:25:12] 2025-10-12 12:01:09,061 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:25:12] 2025-10-12 12:01:09,061 | INFO     | update_server=False
[2025-10-12 08:25:12] 2025-10-12 12:01:09,062 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:25:12] 2025-10-12 12:01:09,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:25:12] 2025-10-12 12:01:09,062 | INFO     | aborting loop
[2025-10-12 08:25:12] 2025-10-12 12:01:09,258 | INFO     | all job control threads have been joined
[2025-10-12 08:25:12] 2025-10-12 12:01:09,379 | INFO     | all data control threads have been joined
[2025-10-12 08:25:12] 2025-10-12 12:01:09,431 | INFO     | all payload control threads have been joined
[2025-10-12 08:25:12] 2025-10-12 12:01:09,991 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:25:12] 2025-10-12 12:01:10,078 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:25:12] 2025-10-12 12:01:10,078 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:25:12] 2025-10-12 12:01:10,266 | INFO     | [job] control thread has finished
[2025-10-12 08:25:12] 2025-10-12 12:01:10,274 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:25:12] 2025-10-12 12:01:10,280 | INFO     | [job] validate thread has finished
[2025-10-12 08:25:12] 2025-10-12 12:01:10,427 | INFO     | [data] control thread has finished
[2025-10-12 08:25:12] 2025-10-12 12:01:10,428 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:25:12] 2025-10-12 12:01:10,437 | INFO     | [payload] control thread has finished
[2025-10-12 08:25:12] 2025-10-12 12:01:10,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:25:12] 2025-10-12 12:01:10,749 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:25:12] 2025-10-12 12:01:10,843 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:25:12] 2025-10-12 12:01:11,040 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:25:12] 2025-10-12 12:01:11,271 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:25:12] 2025-10-12 12:01:11,404 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:25:12] 2025-10-12 12:01:11,432 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:25:12] 2025-10-12 12:01:12,409 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:25:12] 2025-10-12 12:01:12,524 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:25:12] 2025-10-12 12:01:14,038 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:25:12] 2025-10-12 12:01:35,825 | INFO     | PID=1928600 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 08:25:12] 2025-10-12 12:01:35,827 | INFO     | .. there are 56 such processes running
[2025-10-12 08:25:12] 2025-10-12 12:01:35,827 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:25:12] 2025-10-12 12:01:35,827 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:25:12] 2025-10-12 12:01:35,827 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:25:12] 2025-10-12 12:02:01,305 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:25:12] 2025-10-12 12:02:02,583 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140573790021440)>', '<ExcThread(monitor, started 140573432325888)>']
[2025-10-12 08:25:12] 2025-10-12 12:02:03,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:25:12] 2025-10-12 12:02:03,013 | INFO     | [monitor] control thread has ended
[2025-10-12 08:25:12] 2025-10-12 12:02:07,610 | INFO     | all workflow threads have been joined
[2025-10-12 08:25:12] 2025-10-12 12:02:07,611 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:25:12] 2025-10-12 12:02:07,611 | INFO     | traces error code: 0
[2025-10-12 08:25:12] 2025-10-12 12:02:07,611 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:25:12] 2025-10-12 12:02:07,820 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:25:12] 2025-10-12 12:02:07,850 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:25:12] 2025-10-12 12:02:07,871 [wrapper] pilotpid: 1928600
[2025-10-12 08:25:12] 2025-10-12 12:02:07,894 [wrapper] Pilot exit status: 0
[2025-10-12 08:25:12] 2025-10-12 12:02:08,006 [wrapper] pandaids: 6838990252
[2025-10-12 08:25:12] 2025-10-12 12:02:08,204 [wrapper] cleanup supervisor_pilot 2731386 1928601
[2025-10-12 08:25:12] 2025-10-12 12:02:08,223 [wrapper] Test setup, not cleaning
[2025-10-12 08:25:12] 2025-10-12 12:02:08,241 [wrapper] apfmon messages muted
[2025-10-12 08:25:12] 2025-10-12 12:02:08,271 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:25:12] 2025-10-12 12:02:08,285 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:25:12]  *** Error codes and diagnostics ***
[2025-10-12 08:25:12]     "exeErrorCode": 0,
[2025-10-12 08:25:12]     "exeErrorDiag": "",
[2025-10-12 08:25:12]     "pilotErrorCode": 0,
[2025-10-12 08:25:12]     "pilotErrorDiag": "",
[2025-10-12 08:25:12]  *** Listing of results directory ***
[2025-10-12 08:25:12] total 407084
[2025-10-12 08:25:12] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:04 pilot3.tar.gz
[2025-10-12 08:25:12] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 18:14 queuedata.json
[2025-10-12 08:25:12] -rwx------. 1 boincer umatlas     36292 Oct 11 18:14 runpilot2-wrapper.sh
[2025-10-12 08:25:12] -rw-r--r--. 1 boincer umatlas       100 Oct 12 06:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:25:12] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 06:16 run_atlas
[2025-10-12 08:25:12] -rw-r--r--. 1 boincer umatlas       105 Oct 12 06:16 job.xml
[2025-10-12 08:25:12] -rw-r--r--. 2 boincer umatlas 219550194 Oct 12 06:16 EVNT.46676267._002651.pool.root.1
[2025-10-12 08:25:12] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 06:16 shared
[2025-10-12 08:25:12] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 06:16 input.tar.gz
[2025-10-12 08:25:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 06:16 start_atlas.sh
[2025-10-12 08:25:12] -rw-r--r--. 1 boincer umatlas         0 Oct 12 06:16 boinc_lockfile
[2025-10-12 08:25:12] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 06:16 pandaJob.out
[2025-10-12 08:25:12] -rw-------. 1 boincer umatlas    975520 Oct 12 06:17 agis_schedconf.cvmfs.json
[2025-10-12 08:25:12] -rw-------. 1 boincer umatlas   1560580 Oct 12 06:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:25:12] drwx------. 5 boincer umatlas      4096 Oct 12 06:17 pilot3
[2025-10-12 08:25:12] -rw-------. 1 boincer umatlas 191107614 Oct 12 07:59 HITS.46676269._065973.pool.root.1
[2025-10-12 08:25:12] -rw-r--r--. 1 boincer umatlas       530 Oct 12 07:59 boinc_task_state.xml
[2025-10-12 08:25:12] -rw-------. 1 boincer umatlas      1046 Oct 12 08:00 memory_monitor_summary.json
[2025-10-12 08:25:12] -rw-------. 1 boincer umatlas    345608 Oct 12 08:00 log.46676269._065973.job.log.tgz.1
[2025-10-12 08:25:12] -rw-------. 1 boincer umatlas        95 Oct 12 08:00 pilot_heartbeat.json
[2025-10-12 08:25:12] -rw-------. 1 boincer umatlas      7799 Oct 12 08:01 heartbeat.json
[2025-10-12 08:25:12] -rw-------. 1 boincer umatlas      4824 Oct 12 08:02 pilotlog.txt
[2025-10-12 08:25:12] -rw-------. 1 boincer umatlas    797380 Oct 12 08:02 log.46676269._065973.job.log.1
[2025-10-12 08:25:12] -rw-------. 1 boincer umatlas       357 Oct 12 08:02 output.list
[2025-10-12 08:25:12] -rw-r--r--. 1 boincer umatlas       620 Oct 12 08:02 runtime_log
[2025-10-12 08:25:12] -rw-------. 1 boincer umatlas   1167360 Oct 12 08:02 result.tar.gz
[2025-10-12 08:25:12] -rw-------. 1 boincer umatlas       654 Oct 12 08:02 XeNNDmu1wR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmmhNDmNwFZIm.diag
[2025-10-12 08:25:12] -rw-r--r--. 1 boincer umatlas      8693 Oct 12 08:02 runtime_log.err
[2025-10-12 08:25:12] -rw-r--r--. 1 boincer umatlas      7160 Oct 12 08:21 init_data.xml
[2025-10-12 08:25:12] -rw-r--r--. 1 boincer umatlas        27 Oct 12 08:25 wrapper_checkpoint.txt
[2025-10-12 08:25:12] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 08:25 boinc_mmap_file
[2025-10-12 08:25:12] -rw-r--r--. 1 boincer umatlas     22380 Oct 12 08:25 stderr.txt
[2025-10-12 08:25:12] HITS file was successfully produced:
[2025-10-12 08:25:12] -rw-------. 1 boincer umatlas 191107614 Oct 12 07:59 shared/HITS.pool.root.1
[2025-10-12 08:25:12]  *** Contents of shared directory: ***
[2025-10-12 08:25:12] total 402760
[2025-10-12 08:25:12] -rw-r--r--. 2 boincer umatlas 219550194 Oct 12 06:16 ATLAS.root_0
[2025-10-12 08:25:12] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 06:16 input.tar.gz
[2025-10-12 08:25:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 06:16 start_atlas.sh
[2025-10-12 08:25:12] -rw-------. 1 boincer umatlas 191107614 Oct 12 07:59 HITS.pool.root.1
[2025-10-12 08:25:12] -rw-------. 1 boincer umatlas   1167360 Oct 12 08:02 result.tar.gz
08:25:13 (1906513): run_atlas exited; CPU time 22842.848192
08:25:13 (1906513): called boinc_finish(0)

</stderr_txt>
]]>

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