Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:12:13 (6028): wrapper (7.7.26015): starting
16:12:13 (6028): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 16:12:13] Arguments: --nthreads 8
[2025-10-12 16:12:13] Threads: 8
[2025-10-12 16:12:13] Checking for CVMFS
[2025-10-12 16:12:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:12:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:12:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:12:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:12:16] 2.11.2.0 1304 220508 140704 151622 2 61 17588620 25165824 4632 130560 0 112472493 99.889 67627222 3223 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 16:12:16] CVMFS is ok
[2025-10-12 16:12:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:12:16] Checking for apptainer binary...
[2025-10-12 16:12:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:12:16] Running /usr/bin/apptainer --version
[2025-10-12 16:12:16] apptainer version 1.3.2-1.el7
[2025-10-12 16:12:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:12:29] cg-vwn245.simple-grid.lan
[2025-10-12 16:12:29] apptainer works
[2025-10-12 16:12:29] Set ATHENA_PROC_NUMBER=8
[2025-10-12 16:12:29] Set ATHENA_CORE_NUMBER=8
[2025-10-12 16:12:29] Starting ATLAS job with PandaID=6839474204
[2025-10-12 16:12:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:17:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:17:38] 2025-10-12 18:16:44,668 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:17:38] 2025-10-12 18:16:45,383 | INFO     | time since job start (14442s) is within the limit (172800.0s)
[2025-10-12 20:17:38] 2025-10-12 18:16:46,420 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 20:17:38] 2025-10-12 18:16:46,421 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-10-12 20:17:38] 2025-10-12 18:16:46,423 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6839474204/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:17:38] 2025-10-12 18:16:46,424 | INFO     | extracted standard info from prmon json
[2025-10-12 20:17:38] 2025-10-12 18:16:46,424 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 20:17:38] 2025-10-12 18:16:46,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:17:38] 2025-10-12 18:16:46,424 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:17:38] 2025-10-12 18:16:46,424 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:17:38] 2025-10-12 18:16:46,429 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:17:38] 2025-10-12 18:16:46,430 | INFO     | sum of square deviations: 3675146117.0
[2025-10-12 20:17:38] 2025-10-12 18:16:46,432 | INFO     | sum of deviations: 13988116698.499989
[2025-10-12 20:17:38] 2025-10-12 18:16:46,432 | INFO     | mean x: 1760285949.5
[2025-10-12 20:17:38] 2025-10-12 18:16:46,432 | INFO     | mean y: 2481618.9692982454
[2025-10-12 20:17:38] 2025-10-12 18:16:46,432 | INFO     | -- intersect: -6697411256.1568575
[2025-10-12 20:17:38] 2025-10-12 18:16:46,432 | INFO     | intersect: -6697411256.1568575
[2025-10-12 20:17:38] 2025-10-12 18:16:46,432 | INFO     | chi2: 5.039246825528168
[2025-10-12 20:17:38] 2025-10-12 18:16:46,433 | INFO     | sum of square deviations: 3438620752.0
[2025-10-12 20:17:38] 2025-10-12 18:16:46,435 | INFO     | sum of deviations: 28911837366.99991
[2025-10-12 20:17:38] 2025-10-12 18:16:46,435 | INFO     | mean x: 1760285797.0
[2025-10-12 20:17:38] 2025-10-12 18:16:46,435 | INFO     | mean y: 2491068.739910314
[2025-10-12 20:17:38] 2025-10-12 18:16:46,435 | INFO     | -- intersect: -14797947930.734789
[2025-10-12 20:17:38] 2025-10-12 18:16:46,435 | INFO     | intersect: -14797947930.734789
[2025-10-12 20:17:38] 2025-10-12 18:16:46,436 | INFO     | chi2: 4.310163703442584
[2025-10-12 20:17:38] 2025-10-12 18:16:46,436 | INFO     | current chi2=4.310163703442584 (change=14.468097065461121 %)
[2025-10-12 20:17:38] 2025-10-12 18:16:46,436 | INFO     | right removable region: 222
[2025-10-12 20:17:38] 2025-10-12 18:16:46,436 | INFO     | sum of square deviations: 3438620752.0
[2025-10-12 20:17:38] 2025-10-12 18:16:46,438 | INFO     | sum of deviations: -58132430260.0
[2025-10-12 20:17:38] 2025-10-12 18:16:46,438 | INFO     | mean x: 1760286102.0
[2025-10-12 20:17:38] 2025-10-12 18:16:46,439 | INFO     | mean y: 2528030.076233184
[2025-10-12 20:17:38] 2025-10-12 18:16:46,439 | INFO     | -- intersect: 29761468152.404163
[2025-10-12 20:17:38] 2025-10-12 18:16:46,439 | INFO     | intersect: 29761468152.404163
[2025-10-12 20:17:38] 2025-10-12 18:16:46,439 | INFO     | chi2: 1.1628861072808452
[2025-10-12 20:17:38] 2025-10-12 18:16:46,439 | INFO     | current chi2=1.1628861072808452 (change=76.92341440014775 %)
[2025-10-12 20:17:38] 2025-10-12 18:16:46,440 | INFO     | sum of square deviations: 3212467674.5
[2025-10-12 20:17:38] 2025-10-12 18:16:46,441 | INFO     | sum of deviations: -67976070379.5
[2025-10-12 20:17:38] 2025-10-12 18:16:46,442 | INFO     | mean x: 1760286254.5
[2025-10-12 20:17:38] 2025-10-12 18:16:46,442 | INFO     | mean y: 2534581.26146789
[2025-10-12 20:17:38] 2025-10-12 18:16:46,442 | INFO     | -- intersect: 37250331119.037476
[2025-10-12 20:17:38] 2025-10-12 18:16:46,442 | INFO     | intersect: 37250331119.037476
[2025-10-12 20:17:38] 2025-10-12 18:16:46,442 | INFO     | chi2: 0.9819654203822679
[2025-10-12 20:17:38] 2025-10-12 18:16:46,442 | INFO     | current chi2=0.9819654203822679 (change=15.557902512191909 %)
[2025-10-12 20:17:38] 2025-10-12 18:16:46,443 | INFO     | left removable region: 20
[2025-10-12 20:17:38] 2025-10-12 18:16:46,443 | INFO     | sum of square deviations: 2555770710.5
[2025-10-12 20:17:38] 2025-10-12 18:16:46,452 | INFO     | sum of deviations: -39629564817.0
[2025-10-12 20:17:38] 2025-10-12 18:16:46,452 | INFO     | mean x: 1760286376.5
[2025-10-12 20:17:38] 2025-10-12 18:16:46,452 | INFO     | mean y: 2536701.2574257427
[2025-10-12 20:17:38] 2025-10-12 18:16:46,452 | INFO     | -- intersect: 27297388609.291615
[2025-10-12 20:17:38] 2025-10-12 18:16:46,452 | INFO     | intersect: 27297388609.291615
[2025-10-12 20:17:38] 2025-10-12 18:16:46,453 | INFO     | chi2: 0.1805818858153151
[2025-10-12 20:17:38] 2025-10-12 18:16:46,453 | INFO     | -- intersect: 27297388609.291615
[2025-10-12 20:17:38] 2025-10-12 18:16:46,453 | INFO     | current memory leak: -15.51 B/s (using 202 data points, chi2=0.18)
[2025-10-12 20:17:38] 2025-10-12 18:16:46,454 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 20:17:38] 2025-10-12 18:16:46,454 | INFO     | ..............................
[2025-10-12 20:17:38] 2025-10-12 18:16:46,454 | INFO     | . Timing measurements:
[2025-10-12 20:17:38] 2025-10-12 18:16:46,454 | INFO     | . get job = 0 s
[2025-10-12 20:17:38] 2025-10-12 18:16:46,454 | INFO     | . initial setup = 8 s
[2025-10-12 20:17:38] 2025-10-12 18:16:46,454 | INFO     | . payload setup = 126 s
[2025-10-12 20:17:38] 2025-10-12 18:16:46,455 | INFO     | . stage-in = 0 s
[2025-10-12 20:17:38] 2025-10-12 18:16:46,455 | INFO     | . payload execution = 14019 s
[2025-10-12 20:17:38] 2025-10-12 18:16:46,455 | INFO     | . stage-out = 4 s
[2025-10-12 20:17:38] 2025-10-12 18:16:46,455 | INFO     | . log creation = 1 s
[2025-10-12 20:17:38] 2025-10-12 18:16:46,455 | INFO     | ..............................
[2025-10-12 20:17:38] 2025-10-12 18:16:46,636 | INFO     | 
[2025-10-12 20:17:38] 2025-10-12 18:16:46,636 | INFO     | job summary report
[2025-10-12 20:17:38] 2025-10-12 18:16:46,636 | INFO     | --------------------------------------------------
[2025-10-12 20:17:38] 2025-10-12 18:16:46,636 | INFO     | PanDA job id: 6839474204
[2025-10-12 20:17:38] 2025-10-12 18:16:46,636 | INFO     | task id: 46676269
[2025-10-12 20:17:38] 2025-10-12 18:16:46,636 | INFO     | errors: (none)
[2025-10-12 20:17:38] 2025-10-12 18:16:46,636 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:17:38] 2025-10-12 18:16:46,637 | INFO     | pilot state: finished 
[2025-10-12 20:17:38] 2025-10-12 18:16:46,637 | INFO     | transexitcode: 0
[2025-10-12 20:17:38] 2025-10-12 18:16:46,637 | INFO     | exeerrorcode: 0
[2025-10-12 20:17:38] 2025-10-12 18:16:46,637 | INFO     | exeerrordiag: 
[2025-10-12 20:17:38] 2025-10-12 18:16:46,637 | INFO     | exitcode: 0
[2025-10-12 20:17:38] 2025-10-12 18:16:46,637 | INFO     | exitmsg: OK
[2025-10-12 20:17:38] 2025-10-12 18:16:46,637 | INFO     | cpuconsumptiontime: 53394 s
[2025-10-12 20:17:38] 2025-10-12 18:16:46,637 | INFO     | nevents: 400
[2025-10-12 20:17:38] 2025-10-12 18:16:46,637 | INFO     | neventsw: 0
[2025-10-12 20:17:38] 2025-10-12 18:16:46,637 | INFO     | pid: 16332
[2025-10-12 20:17:38] 2025-10-12 18:16:46,637 | INFO     | pgrp: 16332
[2025-10-12 20:17:38] 2025-10-12 18:16:46,638 | INFO     | corecount: 8
[2025-10-12 20:17:38] 2025-10-12 18:16:46,638 | INFO     | event service: False
[2025-10-12 20:17:38] 2025-10-12 18:16:46,638 | INFO     | sizes: {0: 2347979, 1: 2348665, 2: 2348864, 13: 2348864, 23: 2348920, 34: 2348948, 45: 2349104, 56: 2349132, 66: 2349160, 77: 2349188, 88: 2349244, 93: 2349814, 98
[2025-10-12 20:17:38] 2025-10-12 18:16:46,638 | INFO     | --------------------------------------------------
[2025-10-12 20:17:38] 2025-10-12 18:16:46,638 | INFO     | 
[2025-10-12 20:17:38] 2025-10-12 18:16:46,638 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-10-12 20:17:38] 2025-10-12 18:16:47,149 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,149 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,150 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,150 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,150 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,150 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,150 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,150 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,150 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,150 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,150 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,150 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,151 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,151 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,151 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,151 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,151 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,151 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:17:38] 2025-10-12 18:16:47,151 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,151 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:17:38] 2025-10-12 18:16:47,152 | INFO     | job 6839474204 has completed (purged errors)
[2025-10-12 20:17:38] 2025-10-12 18:16:47,152 | INFO     | overall cleanup function is called
[2025-10-12 20:17:38] 2025-10-12 18:16:48,161 | INFO     | --- collectZombieJob: --- 10, [16332]
[2025-10-12 20:17:38] 2025-10-12 18:16:48,161 | INFO     | zombie collector waiting for pid 16332
[2025-10-12 20:17:38] 2025-10-12 18:16:48,161 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:17:38] 2025-10-12 18:16:48,161 | INFO     | collected zombie processes
[2025-10-12 20:17:38] 2025-10-12 18:16:48,161 | INFO     | will attempt to kill all subprocesses of pid=16332
[2025-10-12 20:17:38] 2025-10-12 18:16:48,298 | INFO     | process IDs to be killed: [16332] (in reverse order)
[2025-10-12 20:17:38] 2025-10-12 18:16:49,189 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:17:38] 2025-10-12 18:16:49,190 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:17:38] 2025-10-12 18:16:49,193 | INFO     | did not find any defunct processes belonging to 16332
[2025-10-12 20:17:38] 2025-10-12 18:16:49,197 | INFO     | did not find any defunct processes belonging to 16332
[2025-10-12 20:17:38] 2025-10-12 18:16:49,197 | INFO     | ready for new job
[2025-10-12 20:17:38] 2025-10-12 18:16:49,197 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:17:38] 2025-10-12 18:16:49,199 | INFO     | ***************************************
[2025-10-12 20:17:38] 2025-10-12 18:16:49,199 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:17:38] 2025-10-12 18:16:49,200 | INFO     | ***************************************
[2025-10-12 20:17:38] 2025-10-12 18:16:49,200 | INFO     | 
[2025-10-12 20:17:38] 2025-10-12 18:16:49,200 | INFO     | pilot is running in a VM
[2025-10-12 20:17:38] 2025-10-12 18:16:49,200 | INFO     | architecture information:
[2025-10-12 20:17:38] 2025-10-12 18:16:49,209 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:17:38] 2025-10-12 18:16:49,407 | INFO     | cat /etc/os-release:
[2025-10-12 20:17:38] NAME="CentOS Linux"
[2025-10-12 20:17:38] VERSION="7 (Core)"
[2025-10-12 20:17:38] ID="centos"
[2025-10-12 20:17:38] ID_LIKE="rhel fedora"
[2025-10-12 20:17:38] VERSION_ID="7"
[2025-10-12 20:17:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:17:38] ANSI_COLOR="0;31"
[2025-10-12 20:17:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:17:38] HOME_URL="https://www.centos.org/"
[2025-10-12 20:17:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:17:38] 
[2025-10-12 20:17:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:17:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:17:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:17:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:17:38] 
[2025-10-12 20:17:38] 2025-10-12 18:16:49,408 | INFO     | ***************************************
[2025-10-12 20:17:38] 2025-10-12 18:16:49,911 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-10-12 20:17:38] 2025-10-12 18:16:50,105 | INFO     | sufficient remaining disk space (494903754752 B)
[2025-10-12 20:17:38] 2025-10-12 18:16:50,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:17:38] 2025-10-12 18:16:50,106 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:17:38] 2025-10-12 18:16:50,106 | INFO     | update_server=False
[2025-10-12 20:17:38] 2025-10-12 18:16:50,106 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:17:38] 2025-10-12 18:16:50,455 | INFO     | all payload control threads have been joined
[2025-10-12 20:17:38] 2025-10-12 18:16:50,662 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:17:38] 2025-10-12 18:16:50,704 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:17:38] 2025-10-12 18:16:50,704 | INFO     | aborting loop
[2025-10-12 20:17:38] 2025-10-12 18:16:50,855 | INFO     | all data control threads have been joined
[2025-10-12 20:17:38] 2025-10-12 18:16:51,112 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:17:38] 2025-10-12 18:16:51,309 | INFO     | all job control threads have been joined
[2025-10-12 20:17:38] 2025-10-12 18:16:51,461 | INFO     | [payload] control thread has finished
[2025-10-12 20:17:38] 2025-10-12 18:16:51,483 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:17:38] 2025-10-12 18:16:51,486 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:17:38] 2025-10-12 18:16:51,543 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:17:38] 2025-10-12 18:16:51,605 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:17:38] 2025-10-12 18:16:51,650 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:17:38] 2025-10-12 18:16:51,710 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:17:38] 2025-10-12 18:16:51,861 | INFO     | [data] control thread has finished
[2025-10-12 20:17:38] 2025-10-12 18:16:52,097 | INFO     | [job] validate thread has finished
[2025-10-12 20:17:38] 2025-10-12 18:16:52,315 | INFO     | [job] control thread has finished
[2025-10-12 20:17:38] 2025-10-12 18:16:52,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:17:38] 2025-10-12 18:16:52,496 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:17:38] 2025-10-12 18:16:52,550 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:17:38] 2025-10-12 18:16:52,555 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:17:38] 2025-10-12 18:16:52,656 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:17:38] 2025-10-12 18:16:52,669 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:17:38] 2025-10-12 18:16:56,360 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:17:38] 2025-10-12 18:17:18,552 | INFO     | PID=9794 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 20:17:38] 2025-10-12 18:17:18,552 | INFO     | .. there are 9 such processes running
[2025-10-12 20:17:38] 2025-10-12 18:17:18,552 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:17:38] 2025-10-12 18:17:18,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:17:38] 2025-10-12 18:17:18,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:17:38] 2025-10-12 18:17:27,648 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:17:38] 2025-10-12 18:17:28,528 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139709552305984)>', '<ExcThread(monitor, started 139708835292928)>']
[2025-10-12 20:17:38] 2025-10-12 18:17:28,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:17:38] 2025-10-12 18:17:28,612 | INFO     | [monitor] control thread has ended
[2025-10-12 20:17:38] 2025-10-12 18:17:33,554 | INFO     | all workflow threads have been joined
[2025-10-12 20:17:38] 2025-10-12 18:17:33,554 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:17:38] 2025-10-12 18:17:33,554 | INFO     | traces error code: 0
[2025-10-12 20:17:38] 2025-10-12 18:17:33,555 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:17:38] 2025-10-12 18:17:33,847 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:17:38] 2025-10-12 18:17:33,879 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:17:38] 2025-10-12 18:17:33,987 [wrapper] pilotpid: 9794
[2025-10-12 20:17:38] 2025-10-12 18:17:34,054 [wrapper] Pilot exit status: 0
[2025-10-12 20:17:38] 2025-10-12 18:17:34,388 [wrapper] pandaids: 6839474204
[2025-10-12 20:17:38] 2025-10-12 18:17:35,236 [wrapper] cleanup supervisor_pilot 12249 9795
[2025-10-12 20:17:38] 2025-10-12 18:17:35,296 [wrapper] Test setup, not cleaning
[2025-10-12 20:17:38] 2025-10-12 18:17:35,381 [wrapper] apfmon messages muted
[2025-10-12 20:17:38] 2025-10-12 18:17:35,428 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:17:38] 2025-10-12 18:17:35,488 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:17:38]  *** Error codes and diagnostics ***
[2025-10-12 20:17:38]     "exeErrorCode": 0,
[2025-10-12 20:17:38]     "exeErrorDiag": "",
[2025-10-12 20:17:38]     "pilotErrorCode": 0,
[2025-10-12 20:17:38]     "pilotErrorDiag": "",
[2025-10-12 20:17:38]  *** Listing of results directory ***
[2025-10-12 20:17:38] total 408900
[2025-10-12 20:17:38] -rw-r--r--. 1 boinc boinc    557409 Oct 12 06:38 pilot3.tar.gz
[2025-10-12 20:17:38] -rw-r--r--. 1 boinc boinc      5112 Oct 12 07:03 queuedata.json
[2025-10-12 20:17:38] -rwx------. 1 boinc boinc     36292 Oct 12 07:04 runpilot2-wrapper.sh
[2025-10-12 20:17:38] -rw-r--r--. 1 boinc boinc       100 Oct 12 16:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:17:38] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 16:12 run_atlas
[2025-10-12 20:17:38] -rw-r--r--. 1 boinc boinc       105 Oct 12 16:12 job.xml
[2025-10-12 20:17:38] -rw-r--r--. 2 boinc boinc 221966417 Oct 12 16:12 EVNT.46676267._001369.pool.root.1
[2025-10-12 20:17:38] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:12 start_atlas.sh
[2025-10-12 20:17:38] drwxrwx--x. 2 boinc boinc        68 Oct 12 16:12 shared
[2025-10-12 20:17:38] -rw-r--r--. 2 boinc boinc    569681 Oct 12 16:12 input.tar.gz
[2025-10-12 20:17:38] -rw-r--r--. 1 boinc boinc      6391 Oct 12 16:12 init_data.xml
[2025-10-12 20:17:38] -rw-r--r--. 1 boinc boinc         0 Oct 12 16:12 boinc_lockfile
[2025-10-12 20:17:38] -rw-r--r--. 1 boinc boinc      2550 Oct 12 16:12 pandaJob.out
[2025-10-12 20:17:38] -rw-------. 1 boinc boinc    975528 Oct 12 16:15 agis_schedconf.cvmfs.json
[2025-10-12 20:17:38] drwx------. 5 boinc boinc      4096 Oct 12 16:16 pilot3
[2025-10-12 20:17:38] -rw-------. 1 boinc boinc 188098540 Oct 12 20:13 HITS.46676269._071570.pool.root.1
[2025-10-12 20:17:38] -rw-r--r--. 1 boinc boinc       531 Oct 12 20:13 boinc_task_state.xml
[2025-10-12 20:17:38] -rw-------. 1 boinc boinc      1017 Oct 12 20:14 memory_monitor_summary.json
[2025-10-12 20:17:38] -rw-------. 1 boinc boinc   1560580 Oct 12 20:15 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:17:38] -rw-------. 1 boinc boinc    452407 Oct 12 20:15 log.46676269._071570.job.log.tgz.1
[2025-10-12 20:17:38] -rw-------. 1 boinc boinc        95 Oct 12 20:16 pilot_heartbeat.json
[2025-10-12 20:17:38] -rw-------. 1 boinc boinc      7783 Oct 12 20:16 heartbeat.json
[2025-10-12 20:17:38] -rw-r--r--. 1 boinc boinc      8192 Oct 12 20:17 boinc_mmap_file
[2025-10-12 20:17:38] -rw-r--r--. 1 boinc boinc        28 Oct 12 20:17 wrapper_checkpoint.txt
[2025-10-12 20:17:38] -rw-------. 1 boinc boinc      4884 Oct 12 20:17 pilotlog.txt
[2025-10-12 20:17:38] -rw-------. 1 boinc boinc   1928347 Oct 12 20:17 log.46676269._071570.job.log.1
[2025-10-12 20:17:38] -rw-------. 1 boinc boinc       357 Oct 12 20:17 output.list
[2025-10-12 20:17:38] -rw-r--r--. 1 boinc boinc       620 Oct 12 20:17 runtime_log
[2025-10-12 20:17:38] -rw-------. 1 boinc boinc   2396160 Oct 12 20:17 result.tar.gz
[2025-10-12 20:17:38] -rw-r--r--. 1 boinc boinc      8717 Oct 12 20:17 runtime_log.err
[2025-10-12 20:17:38] -rw-------. 1 boinc boinc       657 Oct 12 20:17 53hKDm1Q3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhgiNDmixfgvm.diag
[2025-10-12 20:17:38] -rw-r--r--. 1 boinc boinc     20814 Oct 12 20:17 stderr.txt
[2025-10-12 20:17:38] HITS file was successfully produced:
[2025-10-12 20:17:38] -rw-------. 1 boinc boinc 188098540 Oct 12 20:13 shared/HITS.pool.root.1
[2025-10-12 20:17:38]  *** Contents of shared directory: ***
[2025-10-12 20:17:38] total 403376
[2025-10-12 20:17:38] -rw-r--r--. 2 boinc boinc 221966417 Oct 12 16:12 ATLAS.root_0
[2025-10-12 20:17:38] -rw-r--r--. 2 boinc boinc     15120 Oct 12 16:12 start_atlas.sh
[2025-10-12 20:17:38] -rw-r--r--. 2 boinc boinc    569681 Oct 12 16:12 input.tar.gz
[2025-10-12 20:17:38] -rw-------. 1 boinc boinc 188098540 Oct 12 20:13 HITS.pool.root.1
[2025-10-12 20:17:38] -rw-------. 1 boinc boinc   2396160 Oct 12 20:17 result.tar.gz
20:17:39 (6028): run_atlas exited; CPU time 53600.945771
20:17:39 (6028): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN