Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:50:52 (3547728): wrapper (7.7.26015): starting
21:50:52 (3547728): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 21:50:52] Arguments: --nthreads 4
[2025-10-12 21:50:52] Threads: 4
[2025-10-12 21:50:52] Checking for CVMFS
[2025-10-12 21:50:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:50:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:50:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:50:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:50:52] 2.9.2.0 1861142 4643 97576 151635 1 56 23139123 36864000 0 130560 0 4255401 99.992 166754 962 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 21:50:52] CVMFS is ok
[2025-10-12 21:50:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:50:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:50:52] Further information can be found at the LHC@home message board.
[2025-10-12 21:50:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:50:52] Checking for apptainer binary...
[2025-10-12 21:50:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:50:52] Running /usr/bin/apptainer --version
[2025-10-12 21:50:52] apptainer version 1.4.1-1.1
[2025-10-12 21:50:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:50:52] thA319
[2025-10-12 21:50:52] apptainer works
[2025-10-12 21:50:52] Set ATHENA_PROC_NUMBER=4
[2025-10-12 21:50:52] Set ATHENA_CORE_NUMBER=4
[2025-10-12 21:50:52] Starting ATLAS job with PandaID=6839316762
[2025-10-12 21:50:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:59:10]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:59:10] 2025-10-12 20:58:40,149 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:59:10] 2025-10-12 20:58:40,151 | INFO     | did not find any defunct processes belonging to 3558074
[2025-10-12 22:59:10] 2025-10-12 20:58:40,152 | INFO     | did not find any defunct processes belonging to 3558074
[2025-10-12 22:59:10] 2025-10-12 20:58:40,152 | INFO     | ready for new job
[2025-10-12 22:59:10] 2025-10-12 20:58:40,152 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:59:10] 2025-10-12 20:58:40,153 | INFO     | ***************************************
[2025-10-12 22:59:10] 2025-10-12 20:58:40,153 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:59:10] 2025-10-12 20:58:40,153 | INFO     | ***************************************
[2025-10-12 22:59:10] 2025-10-12 20:58:40,153 | INFO     | 
[2025-10-12 22:59:10] 2025-10-12 20:58:40,153 | INFO     | architecture information:
[2025-10-12 22:59:10] 2025-10-12 20:58:40,154 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:59:10] 2025-10-12 20:58:40,166 | INFO     | cat /etc/os-release:
[2025-10-12 22:59:10] NAME="CentOS Linux"
[2025-10-12 22:59:10] VERSION="7 (Core)"
[2025-10-12 22:59:10] ID="centos"
[2025-10-12 22:59:10] ID_LIKE="rhel fedora"
[2025-10-12 22:59:10] VERSION_ID="7"
[2025-10-12 22:59:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:59:10] ANSI_COLOR="0;31"
[2025-10-12 22:59:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:59:10] HOME_URL="https://www.centos.org/"
[2025-10-12 22:59:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:59:10] 
[2025-10-12 22:59:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:59:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:59:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:59:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:59:10] 
[2025-10-12 22:59:10] 2025-10-12 20:58:40,167 | INFO     | ***************************************
[2025-10-12 22:59:10] 2025-10-12 20:58:40,670 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 22:59:10] 2025-10-12 20:58:40,687 | INFO     | sufficient remaining disk space (333272055808 B)
[2025-10-12 22:59:10] 2025-10-12 20:58:40,687 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:59:10] 2025-10-12 20:58:40,688 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:59:10] 2025-10-12 20:58:40,688 | INFO     | update_server=False
[2025-10-12 22:59:10] 2025-10-12 20:58:40,688 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:59:10] 2025-10-12 20:58:40,688 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:59:10] 2025-10-12 20:58:40,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:59:10] 2025-10-12 20:58:41,118 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 22:59:10] 2025-10-12 20:58:41,119 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 22:59:10] 2025-10-12 20:58:41,119 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:59:10] 2025-10-12 20:58:41,119 | INFO     | will abort loop
[2025-10-12 22:59:10] 2025-10-12 20:58:41,344 | INFO     | all job control threads have been joined
[2025-10-12 22:59:10] 2025-10-12 20:58:41,501 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:59:10] 2025-10-12 20:58:41,618 | INFO     | all data control threads have been joined
[2025-10-12 22:59:10] 2025-10-12 20:58:41,694 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:59:10] 2025-10-12 20:58:41,694 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:59:10] 2025-10-12 20:58:41,720 | INFO     | all payload control threads have been joined
[2025-10-12 22:59:10] 2025-10-12 20:58:41,946 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:59:10] 2025-10-12 20:58:42,125 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:59:10] 2025-10-12 20:58:42,248 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:59:10] 2025-10-12 20:58:42,346 | INFO     | [job] control thread has finished
[2025-10-12 22:59:10] 2025-10-12 20:58:42,624 | INFO     | [data] control thread has finished
[2025-10-12 22:59:10] 2025-10-12 20:58:42,726 | INFO     | [payload] control thread has finished
[2025-10-12 22:59:10] 2025-10-12 20:58:42,991 | INFO     | [job] validate thread has finished
[2025-10-12 22:59:10] 2025-10-12 20:58:43,027 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:59:10] 2025-10-12 20:58:43,107 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:59:10] 2025-10-12 20:58:43,148 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:59:10] 2025-10-12 20:58:43,214 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:59:10] 2025-10-12 20:58:43,508 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:59:10] 2025-10-12 20:58:44,917 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:59:10] 2025-10-12 20:58:50,963 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:59:10] 2025-10-12 20:58:51,969 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:59:10] 2025-10-12 20:59:04,804 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:59:10] 2025-10-12 20:59:05,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140092866541376)>', '<ExcThread(monitor, started 140092077229824)>']
[2025-10-12 22:59:10] 2025-10-12 20:59:10,604 | INFO     | PID=3551512 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:59:10] 2025-10-12 20:59:10,604 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:59:10] 2025-10-12 20:59:10,604 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:59:10] 2025-10-12 20:59:10,604 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:59:10] 2025-10-12 20:59:10,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:59:10] 2025-10-12 20:59:10,604 | INFO     | [monitor] control thread has ended
[2025-10-12 22:59:10] 2025-10-12 20:59:10,625 | INFO     | all workflow threads have been joined
[2025-10-12 22:59:10] 2025-10-12 20:59:10,625 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:59:10] 2025-10-12 20:59:10,625 | INFO     | traces error code: 0
[2025-10-12 22:59:10] 2025-10-12 20:59:10,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:59:10] 2025-10-12 20:59:10,690 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:59:10] 2025-10-12 20:59:10,694 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:59:10] 2025-10-12 20:59:10,697 [wrapper] pilotpid: 3551512
[2025-10-12 22:59:10] 2025-10-12 20:59:10,701 [wrapper] Pilot exit status: 0
[2025-10-12 22:59:10] 2025-10-12 20:59:10,711 [wrapper] pandaids: 6839316762
[2025-10-12 22:59:10] 2025-10-12 20:59:10,733 [wrapper] cleanup supervisor_pilot 3567957 3551513
[2025-10-12 22:59:10] 2025-10-12 20:59:10,736 [wrapper] Test setup, not cleaning
[2025-10-12 22:59:10] 2025-10-12 20:59:10,740 [wrapper] apfmon messages muted
[2025-10-12 22:59:10] 2025-10-12 20:59:10,743 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:59:10] 2025-10-12 20:59:10,747 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:59:10]  *** Error codes and diagnostics ***
[2025-10-12 22:59:10]     "exeErrorCode": 0,
[2025-10-12 22:59:10]     "exeErrorDiag": "",
[2025-10-12 22:59:10]     "pilotErrorCode": 0,
[2025-10-12 22:59:10]     "pilotErrorDiag": "",
[2025-10-12 22:59:10]  *** Listing of results directory ***
[2025-10-12 22:59:10] total 409324
[2025-10-12 22:59:10] -rw-r--r-- 1 boinc boinc    557409 Oct 12 03:53 pilot3.tar.gz
[2025-10-12 22:59:10] -rw-r--r-- 1 boinc boinc      5112 Oct 12 04:35 queuedata.json
[2025-10-12 22:59:10] -rwx------ 1 boinc boinc     36292 Oct 12 04:39 runpilot2-wrapper.sh
[2025-10-12 22:59:10] -rw-r--r-- 1 boinc boinc       100 Oct 12 21:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:59:10] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 21:50 run_atlas
[2025-10-12 22:59:10] -rw-r--r-- 1 boinc boinc       105 Oct 12 21:50 job.xml
[2025-10-12 22:59:10] -rw-r--r-- 2 boinc boinc 221453140 Oct 12 21:50 EVNT.46676267._003186.pool.root.1
[2025-10-12 22:59:10] -rw-r--r-- 2 boinc boinc    569681 Oct 12 21:50 input.tar.gz
[2025-10-12 22:59:10] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:50 start_atlas.sh
[2025-10-12 22:59:10] drwxrwx--x 2 boinc boinc      4096 Oct 12 21:50 shared
[2025-10-12 22:59:10] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:50 boinc_setup_complete
[2025-10-12 22:59:10] -rw-r--r-- 1 boinc boinc      6370 Oct 12 21:50 init_data.xml
[2025-10-12 22:59:10] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:50 boinc_lockfile
[2025-10-12 22:59:10] -rw-r--r-- 1 boinc boinc      2546 Oct 12 21:50 pandaJob.out
[2025-10-12 22:59:10] -rw------- 1 boinc boinc    975536 Oct 12 21:50 agis_schedconf.cvmfs.json
[2025-10-12 22:59:10] -rw------- 1 boinc boinc   1560580 Oct 12 21:50 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:59:10] drwx------ 5 boinc boinc      4096 Oct 12 21:51 pilot3
[2025-10-12 22:59:10] -rw------- 1 boinc boinc 192099021 Oct 12 22:58 HITS.46676269._069432.pool.root.1
[2025-10-12 22:59:10] -rw-r--r-- 1 boinc boinc       529 Oct 12 22:58 boinc_task_state.xml
[2025-10-12 22:59:10] -rw------- 1 boinc boinc        95 Oct 12 22:58 pilot_heartbeat.json
[2025-10-12 22:59:10] -rw------- 1 boinc boinc      1022 Oct 12 22:58 memory_monitor_summary.json
[2025-10-12 22:59:10] -rw------- 1 boinc boinc    243061 Oct 12 22:58 log.46676269._069432.job.log.tgz.1
[2025-10-12 22:59:10] -rw------- 1 boinc boinc      7762 Oct 12 22:58 heartbeat.json
[2025-10-12 22:59:10] -rw-r--r-- 1 boinc boinc        27 Oct 12 22:59 wrapper_checkpoint.txt
[2025-10-12 22:59:10] -rw-r--r-- 1 boinc boinc      8192 Oct 12 22:59 boinc_mmap_file
[2025-10-12 22:59:10] -rw------- 1 boinc boinc      5010 Oct 12 22:59 pilotlog.txt
[2025-10-12 22:59:10] -rw------- 1 boinc boinc    606521 Oct 12 22:59 log.46676269._069432.job.log.1
[2025-10-12 22:59:10] -rw------- 1 boinc boinc       357 Oct 12 22:59 output.list
[2025-10-12 22:59:10] -rw-r--r-- 1 boinc boinc       620 Oct 12 22:59 runtime_log
[2025-10-12 22:59:10] -rw------- 1 boinc boinc    870400 Oct 12 22:59 result.tar.gz
[2025-10-12 22:59:10] -rw-r--r-- 1 boinc boinc      8777 Oct 12 22:59 runtime_log.err
[2025-10-12 22:59:10] -rw------- 1 boinc boinc       658 Oct 12 22:59 OtRMDmsA1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsMiNDm8uzVdn.diag
[2025-10-12 22:59:10] -rw-r--r-- 1 boinc boinc     10185 Oct 12 22:59 stderr.txt
[2025-10-12 22:59:10] HITS file was successfully produced:
[2025-10-12 22:59:10] -rw------- 1 boinc boinc 192099021 Oct 12 22:58 shared/HITS.pool.root.1
[2025-10-12 22:59:10]  *** Contents of shared directory: ***
[2025-10-12 22:59:10] total 405296
[2025-10-12 22:59:10] -rw-r--r-- 2 boinc boinc 221453140 Oct 12 21:50 ATLAS.root_0
[2025-10-12 22:59:10] -rw-r--r-- 2 boinc boinc    569681 Oct 12 21:50 input.tar.gz
[2025-10-12 22:59:10] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:50 start_atlas.sh
[2025-10-12 22:59:10] -rw------- 1 boinc boinc 192099021 Oct 12 22:58 HITS.pool.root.1
[2025-10-12 22:59:10] -rw------- 1 boinc boinc    870400 Oct 12 22:59 result.tar.gz
22:59:12 (3547728): run_atlas exited; CPU time 15117.900271
22:59:12 (3547728): called boinc_finish(0)

</stderr_txt>
]]>

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