Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:48:49 (3168995): wrapper (7.7.26015): starting
20:48:49 (3168995): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 20:48:49] Arguments: --nthreads 3
[2025-10-12 20:48:49] Threads: 3
[2025-10-12 20:48:49] Checking for CVMFS
[2025-10-12 20:48:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:48:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:48:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:48:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:48:49] 2.9.2.0 1719469 4753 85620 151633 3 56 30639124 36864001 0 130560 0 3807422 99.991 162687 928 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 20:48:49] CVMFS is ok
[2025-10-12 20:48:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:48:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:48:49] Further information can be found at the LHC@home message board.
[2025-10-12 20:48:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:48:49] Checking for apptainer binary...
[2025-10-12 20:48:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:48:49] Running /usr/bin/apptainer --version
[2025-10-12 20:48:49] apptainer version 1.4.1-1.1
[2025-10-12 20:48:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:48:49] thA349
[2025-10-12 20:48:49] apptainer works
[2025-10-12 20:48:49] Set ATHENA_PROC_NUMBER=3
[2025-10-12 20:48:49] Set ATHENA_CORE_NUMBER=3
[2025-10-12 20:48:49] Starting ATLAS job with PandaID=6839387580
[2025-10-12 20:48:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:11:08]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:11:08] 2025-10-12 20:10:07,831 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:11:08] 2025-10-12 20:10:07,831 | INFO     | update_server=False
[2025-10-12 22:11:08] 2025-10-12 20:10:07,831 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:11:08] 2025-10-12 20:10:07,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:11:08] 2025-10-12 20:10:07,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:11:08] 2025-10-12 20:10:08,414 | INFO     | all payload control threads have been joined
[2025-10-12 22:11:08] 2025-10-12 20:10:08,432 | INFO     | all data control threads have been joined
[2025-10-12 22:11:08] 2025-10-12 20:10:08,625 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:11:08] 2025-10-12 20:10:08,625 | INFO     | aborting loop
[2025-10-12 22:11:08] 2025-10-12 20:10:08,834 | INFO     | all job control threads have been joined
[2025-10-12 22:11:08] 2025-10-12 20:10:08,836 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:11:08] 2025-10-12 20:10:08,836 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:11:08] 2025-10-12 20:10:08,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:11:08] 2025-10-12 20:10:09,061 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:11:08] 2025-10-12 20:10:09,420 | INFO     | [payload] control thread has finished
[2025-10-12 22:11:08] 2025-10-12 20:10:09,437 | INFO     | [data] control thread has finished
[2025-10-12 22:11:08] 2025-10-12 20:10:09,589 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:11:08] 2025-10-12 20:10:09,631 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:11:08] 2025-10-12 20:10:09,759 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:11:08] 2025-10-12 20:10:09,840 | INFO     | [job] control thread has finished
[2025-10-12 22:11:08] 2025-10-12 20:10:10,112 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:11:08] 2025-10-12 20:10:10,121 | INFO     | [job] validate thread has finished
[2025-10-12 22:11:08] 2025-10-12 20:10:10,223 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:11:08] 2025-10-12 20:10:10,225 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:11:08] 2025-10-12 20:10:10,881 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:11:08] 2025-10-12 20:10:11,838 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:11:08] 2025-10-12 20:10:18,455 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:11:08] 2025-10-12 20:10:19,461 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:11:08] 2025-10-12 20:10:38,628 | INFO     | PID=3172715 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:11:08] 2025-10-12 20:10:38,628 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:11:08] 2025-10-12 20:10:38,628 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:11:08] 2025-10-12 20:10:38,628 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:11:08] 2025-10-12 20:11:02,517 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:11:08] 2025-10-12 20:11:02,927 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139944969529152)>', '<ExcThread(monitor, started 139944244795136)>']
[2025-10-12 22:11:08] 2025-10-12 20:11:03,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:11:08] 2025-10-12 20:11:03,755 | INFO     | [monitor] control thread has ended
[2025-10-12 22:11:08] 2025-10-12 20:11:07,953 | INFO     | all workflow threads have been joined
[2025-10-12 22:11:08] 2025-10-12 20:11:07,953 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:11:08] 2025-10-12 20:11:07,954 | INFO     | traces error code: 0
[2025-10-12 22:11:08] 2025-10-12 20:11:07,954 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:11:08] 2025-10-12 20:11:08,005 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:11:08] 2025-10-12 20:11:08,008 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:11:08] 2025-10-12 20:11:08,010 [wrapper] pilotpid: 3172715
[2025-10-12 22:11:08] 2025-10-12 20:11:08,012 [wrapper] Pilot exit status: 0
[2025-10-12 22:11:08] 2025-10-12 20:11:08,020 [wrapper] pandaids: 6839387580
[2025-10-12 22:11:08] 2025-10-12 20:11:08,039 [wrapper] cleanup supervisor_pilot 3191510 3172716
[2025-10-12 22:11:08] 2025-10-12 20:11:08,041 [wrapper] Test setup, not cleaning
[2025-10-12 22:11:08] 2025-10-12 20:11:08,044 [wrapper] apfmon messages muted
[2025-10-12 22:11:08] 2025-10-12 20:11:08,046 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:11:08] 2025-10-12 20:11:08,048 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:11:08]  *** Error codes and diagnostics ***
[2025-10-12 22:11:08]     "exeErrorCode": 0,
[2025-10-12 22:11:08]     "exeErrorDiag": "",
[2025-10-12 22:11:08]     "pilotErrorCode": 0,
[2025-10-12 22:11:08]     "pilotErrorDiag": "",
[2025-10-12 22:11:08]  *** Listing of results directory ***
[2025-10-12 22:11:08] total 405928
[2025-10-12 22:11:08] -rw-r--r-- 1 boinc boinc    557409 Oct 12 06:38 pilot3.tar.gz
[2025-10-12 22:11:08] -rwx------ 1 boinc boinc     36292 Oct 12 06:56 runpilot2-wrapper.sh
[2025-10-12 22:11:08] -rw-r--r-- 1 boinc boinc      5112 Oct 12 06:56 queuedata.json
[2025-10-12 22:11:08] -rw-r--r-- 1 boinc boinc       100 Oct 12 20:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:11:08] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 20:48 run_atlas
[2025-10-12 22:11:08] -rw-r--r-- 1 boinc boinc       105 Oct 12 20:48 job.xml
[2025-10-12 22:11:08] -rw-r--r-- 2 boinc boinc 219122999 Oct 12 20:48 EVNT.46676267._004306.pool.root.1
[2025-10-12 22:11:08] -rw-r--r-- 2 boinc boinc    569673 Oct 12 20:48 input.tar.gz
[2025-10-12 22:11:08] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:48 start_atlas.sh
[2025-10-12 22:11:08] drwxrwx--x 2 boinc boinc      4096 Oct 12 20:48 shared
[2025-10-12 22:11:08] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:48 boinc_setup_complete
[2025-10-12 22:11:08] -rw-r--r-- 1 boinc boinc      6446 Oct 12 20:48 init_data.xml
[2025-10-12 22:11:08] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:48 boinc_lockfile
[2025-10-12 22:11:08] -rw-r--r-- 1 boinc boinc      2550 Oct 12 20:48 pandaJob.out
[2025-10-12 22:11:08] -rw------- 1 boinc boinc    975528 Oct 12 20:48 agis_schedconf.cvmfs.json
[2025-10-12 22:11:08] -rw------- 1 boinc boinc   1560580 Oct 12 20:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:11:08] drwx------ 5 boinc boinc      4096 Oct 12 20:48 pilot3
[2025-10-12 22:11:08] -rw------- 1 boinc boinc 190708209 Oct 12 22:09 HITS.46676269._071471.pool.root.1
[2025-10-12 22:11:08] -rw-r--r-- 1 boinc boinc       529 Oct 12 22:09 boinc_task_state.xml
[2025-10-12 22:11:08] -rw------- 1 boinc boinc      1011 Oct 12 22:09 memory_monitor_summary.json
[2025-10-12 22:11:08] -rw------- 1 boinc boinc    260619 Oct 12 22:10 log.46676269._071471.job.log.tgz.1
[2025-10-12 22:11:08] -rw------- 1 boinc boinc      7747 Oct 12 22:10 heartbeat.json
[2025-10-12 22:11:08] -rw------- 1 boinc boinc        95 Oct 12 22:10 pilot_heartbeat.json
[2025-10-12 22:11:08] -rw-r--r-- 1 boinc boinc      8192 Oct 12 22:11 boinc_mmap_file
[2025-10-12 22:11:08] -rw-r--r-- 1 boinc boinc        27 Oct 12 22:11 wrapper_checkpoint.txt
[2025-10-12 22:11:08] -rw------- 1 boinc boinc      4824 Oct 12 22:11 pilotlog.txt
[2025-10-12 22:11:08] -rw------- 1 boinc boinc    715883 Oct 12 22:11 log.46676269._071471.job.log.1
[2025-10-12 22:11:08] -rw------- 1 boinc boinc       357 Oct 12 22:11 output.list
[2025-10-12 22:11:08] -rw-r--r-- 1 boinc boinc       620 Oct 12 22:11 runtime_log
[2025-10-12 22:11:08] -rw------- 1 boinc boinc    993280 Oct 12 22:11 result.tar.gz
[2025-10-12 22:11:08] -rw-r--r-- 1 boinc boinc      8777 Oct 12 22:11 runtime_log.err
[2025-10-12 22:11:08] -rw------- 1 boinc boinc       658 Oct 12 22:11 iSFMDmzI3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWfiNDmE1isJo.diag
[2025-10-12 22:11:08] -rw-r--r-- 1 boinc boinc      7611 Oct 12 22:11 stderr.txt
[2025-10-12 22:11:08] HITS file was successfully produced:
[2025-10-12 22:11:08] -rw------- 1 boinc boinc 190708209 Oct 12 22:09 shared/HITS.pool.root.1
[2025-10-12 22:11:08]  *** Contents of shared directory: ***
[2025-10-12 22:11:08] total 401784
[2025-10-12 22:11:08] -rw-r--r-- 2 boinc boinc 219122999 Oct 12 20:48 ATLAS.root_0
[2025-10-12 22:11:08] -rw-r--r-- 2 boinc boinc    569673 Oct 12 20:48 input.tar.gz
[2025-10-12 22:11:08] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:48 start_atlas.sh
[2025-10-12 22:11:08] -rw------- 1 boinc boinc 190708209 Oct 12 22:09 HITS.pool.root.1
[2025-10-12 22:11:08] -rw------- 1 boinc boinc    993280 Oct 12 22:11 result.tar.gz
22:11:09 (3168995): run_atlas exited; CPU time 13940.545429
22:11:09 (3168995): called boinc_finish(0)

</stderr_txt>
]]>

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