Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:43:54 (2799447): wrapper (7.7.26015): starting
21:43:54 (2799447): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 21:43:54] Arguments: --nthreads 3
[2025-10-12 21:43:54] Threads: 3
[2025-10-12 21:43:54] Checking for CVMFS
[2025-10-12 21:43:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:43:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:43:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:43:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:43:54] 2.9.2.0 1484052 4662 67828 151635 0 57 28928212 36864001 0 130560 0 3448716 99.990 165056 1036 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 21:43:54] CVMFS is ok
[2025-10-12 21:43:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:43:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:43:54] Further information can be found at the LHC@home message board.
[2025-10-12 21:43:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:43:54] Checking for apptainer binary...
[2025-10-12 21:43:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:43:54] Running /usr/bin/apptainer --version
[2025-10-12 21:43:54] apptainer version 1.4.1-1.1
[2025-10-12 21:43:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:43:54] magicA244b
[2025-10-12 21:43:54] apptainer works
[2025-10-12 21:43:54] Set ATHENA_PROC_NUMBER=3
[2025-10-12 21:43:54] Set ATHENA_CORE_NUMBER=3
[2025-10-12 21:43:54] Starting ATLAS job with PandaID=6839387555
[2025-10-12 21:43:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:13:14]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:13:14] 2025-10-12 21:12:27,486 | INFO     | [job] validate thread has finished
[2025-10-12 23:13:14] 2025-10-12 21:12:27,509 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:13:14] 2025-10-12 21:12:27,677 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:13:14] 2025-10-12 21:12:27,679 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:13:14] 2025-10-12 21:12:28,212 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:13:14] 2025-10-12 21:12:28,249 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:13:14] 2025-10-12 21:12:29,126 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:13:14] 2025-10-12 21:12:30,021 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:13:14] 2025-10-12 21:12:36,896 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:13:14] 2025-10-12 21:12:37,902 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:13:14] 2025-10-12 21:12:56,814 | INFO     | PID=2803180 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:13:14] 2025-10-12 21:12:56,815 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:13:14] 2025-10-12 21:12:56,815 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:13:14] 2025-10-12 21:12:56,815 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:13:14] 2025-10-12 21:13:09,708 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:13:14] 2025-10-12 21:13:09,735 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140058458728256)>', '<ExcThread(monitor, started 140058103359232)>']
[2025-10-12 23:13:14] 2025-10-12 21:13:09,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:13:14] 2025-10-12 21:13:09,883 | INFO     | [monitor] control thread has ended
[2025-10-12 23:13:14] 2025-10-12 21:13:14,761 | INFO     | all workflow threads have been joined
[2025-10-12 23:13:14] 2025-10-12 21:13:14,762 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:13:14] 2025-10-12 21:13:14,763 | INFO     | traces error code: 0
[2025-10-12 23:13:14] 2025-10-12 21:13:14,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:13:14] 2025-10-12 21:13:14,810 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:13:14] 2025-10-12 21:13:14,813 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:13:14] 2025-10-12 21:13:14,816 [wrapper] pilotpid: 2803180
[2025-10-12 23:13:14] 2025-10-12 21:13:14,819 [wrapper] Pilot exit status: 0
[2025-10-12 23:13:14] 2025-10-12 21:13:14,826 [wrapper] pandaids: 6839387555
[2025-10-12 23:13:14] 2025-10-12 21:13:14,844 [wrapper] cleanup supervisor_pilot 2821751 2803181
[2025-10-12 23:13:14] 2025-10-12 21:13:14,846 [wrapper] Test setup, not cleaning
[2025-10-12 23:13:14] 2025-10-12 21:13:14,849 [wrapper] apfmon messages muted
[2025-10-12 23:13:14] 2025-10-12 21:13:14,851 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:13:14] 2025-10-12 21:13:14,854 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:13:14]  *** Error codes and diagnostics ***
[2025-10-12 23:13:14]     "exeErrorCode": 0,
[2025-10-12 23:13:14]     "exeErrorDiag": "",
[2025-10-12 23:13:14]     "pilotErrorCode": 0,
[2025-10-12 23:13:14]     "pilotErrorDiag": "",
[2025-10-12 23:13:14]  *** Listing of results directory ***
[2025-10-12 23:13:14] total 408476
[2025-10-12 23:13:14] -rw-r--r-- 1 boinc boinc    557409 Oct 12 06:38 pilot3.tar.gz
[2025-10-12 23:13:14] -rw-r--r-- 1 boinc boinc      5112 Oct 12 06:52 queuedata.json
[2025-10-12 23:13:14] -rwx------ 1 boinc boinc     36292 Oct 12 06:53 runpilot2-wrapper.sh
[2025-10-12 23:13:14] -rw-r--r-- 1 boinc boinc       100 Oct 12 21:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:13:14] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 21:43 run_atlas
[2025-10-12 23:13:14] -rw-r--r-- 1 boinc boinc       105 Oct 12 21:43 job.xml
[2025-10-12 23:13:14] -rw-r--r-- 2 boinc boinc 220367285 Oct 12 21:43 EVNT.46676267._004305.pool.root.1
[2025-10-12 23:13:14] -rw-r--r-- 2 boinc boinc    569677 Oct 12 21:43 input.tar.gz
[2025-10-12 23:13:14] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:43 start_atlas.sh
[2025-10-12 23:13:14] drwxrwx--x 2 boinc boinc      4096 Oct 12 21:43 shared
[2025-10-12 23:13:14] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:43 boinc_setup_complete
[2025-10-12 23:13:14] -rw-r--r-- 1 boinc boinc      6200 Oct 12 21:43 init_data.xml
[2025-10-12 23:13:14] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:43 boinc_lockfile
[2025-10-12 23:13:14] -rw-r--r-- 1 boinc boinc      2550 Oct 12 21:43 pandaJob.out
[2025-10-12 23:13:14] -rw------- 1 boinc boinc    975536 Oct 12 21:44 agis_schedconf.cvmfs.json
[2025-10-12 23:13:14] -rw------- 1 boinc boinc   1560580 Oct 12 21:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:13:14] drwx------ 5 boinc boinc      4096 Oct 12 21:44 pilot3
[2025-10-12 23:13:14] -rw------- 1 boinc boinc 191933000 Oct 12 23:11 HITS.46676269._071446.pool.root.1
[2025-10-12 23:13:14] -rw-r--r-- 1 boinc boinc       529 Oct 12 23:11 boinc_task_state.xml
[2025-10-12 23:13:14] -rw------- 1 boinc boinc      1019 Oct 12 23:12 memory_monitor_summary.json
[2025-10-12 23:13:14] -rw------- 1 boinc boinc    268702 Oct 12 23:12 log.46676269._071446.job.log.tgz.1
[2025-10-12 23:13:14] -rw------- 1 boinc boinc      7771 Oct 12 23:12 heartbeat.json
[2025-10-12 23:13:14] -rw------- 1 boinc boinc        95 Oct 12 23:12 pilot_heartbeat.json
[2025-10-12 23:13:14] -rw-r--r-- 1 boinc boinc        27 Oct 12 23:12 wrapper_checkpoint.txt
[2025-10-12 23:13:14] -rw-r--r-- 1 boinc boinc      8192 Oct 12 23:12 boinc_mmap_file
[2025-10-12 23:13:14] -rw------- 1 boinc boinc      4824 Oct 12 23:13 pilotlog.txt
[2025-10-12 23:13:14] -rw------- 1 boinc boinc    774632 Oct 12 23:13 log.46676269._071446.job.log.1
[2025-10-12 23:13:14] -rw------- 1 boinc boinc       357 Oct 12 23:13 output.list
[2025-10-12 23:13:14] -rw-r--r-- 1 boinc boinc       620 Oct 12 23:13 runtime_log
[2025-10-12 23:13:14] -rw------- 1 boinc boinc   1064960 Oct 12 23:13 result.tar.gz
[2025-10-12 23:13:14] -rw-r--r-- 1 boinc boinc      8797 Oct 12 23:13 runtime_log.err
[2025-10-12 23:13:14] -rw------- 1 boinc boinc       662 Oct 12 23:13 bYBLDm5F3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIfiNDmwjMI4m.diag
[2025-10-12 23:13:14] -rw-r--r-- 1 boinc boinc      5712 Oct 12 23:13 stderr.txt
[2025-10-12 23:13:14] HITS file was successfully produced:
[2025-10-12 23:13:14] -rw------- 1 boinc boinc 191933000 Oct 12 23:11 shared/HITS.pool.root.1
[2025-10-12 23:13:14]  *** Contents of shared directory: ***
[2025-10-12 23:13:14] total 404264
[2025-10-12 23:13:14] -rw-r--r-- 2 boinc boinc 220367285 Oct 12 21:43 ATLAS.root_0
[2025-10-12 23:13:14] -rw-r--r-- 2 boinc boinc    569677 Oct 12 21:43 input.tar.gz
[2025-10-12 23:13:14] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:43 start_atlas.sh
[2025-10-12 23:13:14] -rw------- 1 boinc boinc 191933000 Oct 12 23:11 HITS.pool.root.1
[2025-10-12 23:13:14] -rw------- 1 boinc boinc   1064960 Oct 12 23:13 result.tar.gz
23:13:16 (2799447): run_atlas exited; CPU time 15205.432934
23:13:16 (2799447): called boinc_finish(0)

</stderr_txt>
]]>

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