Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:04:17 (4148610): wrapper (7.7.26015): starting
07:04:17 (4148610): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 07:04:17] Arguments: --nthreads 8
[2025-10-12 07:04:17] Threads: 8
[2025-10-12 07:04:17] Checking for CVMFS
[2025-10-12 07:04:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:04:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:04:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:04:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:04:19] 2.13.2.0 128637 115891 224312 151617 0 294 25339477 39288833 8194 16776704 1 78936525 99.635 76736855 36512 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 07:04:19] CVMFS is ok
[2025-10-12 07:04:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:04:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:04:19] Further information can be found at the LHC@home message board.
[2025-10-12 07:04:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:04:19] Checking for apptainer binary...
[2025-10-12 07:04:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:04:19] Running /usr/bin/apptainer --version
[2025-10-12 07:04:19] apptainer version 1.4.3-1.el9
[2025-10-12 07:04:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:04:19] c-211-17.aglt2.org
[2025-10-12 07:04:19] apptainer works
[2025-10-12 07:04:19] Set ATHENA_PROC_NUMBER=8
[2025-10-12 07:04:19] Set ATHENA_CORE_NUMBER=8
[2025-10-12 07:04:19] Starting ATLAS job with PandaID=6839387598
[2025-10-12 07:04:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:32:34]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:32:34] 2025-10-12 16:31:45,451 | INFO     | monitor loop #1318: job 0:6839387598 is in state 'finished'
[2025-10-12 12:32:34] 2025-10-12 16:31:45,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:32:34] 2025-10-12 16:31:45,946 | INFO     | time since job start (19551s) is within the limit (172800.0s)
[2025-10-12 12:32:34] 2025-10-12 16:31:46,540 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 12:32:34] 2025-10-12 16:31:46,547 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.141350000001
[2025-10-12 12:32:34] 2025-10-12 16:31:46,554 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6839387598/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:32:34] 2025-10-12 16:31:46,555 | INFO     | extracted standard info from prmon json
[2025-10-12 12:32:34] 2025-10-12 16:31:46,555 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:32:34] 2025-10-12 16:31:46,555 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:32:34] 2025-10-12 16:31:46,556 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:32:34] 2025-10-12 16:31:46,556 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:32:34] 2025-10-12 16:31:46,562 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:32:34] 2025-10-12 16:31:46,563 | INFO     | sum of square deviations: 9970650744.694916
[2025-10-12 12:32:34] 2025-10-12 16:31:46,566 | INFO     | sum of deviations: 151980409605.67932
[2025-10-12 12:32:34] 2025-10-12 16:31:46,567 | INFO     | mean x: 1760277005.8836477
[2025-10-12 12:32:34] 2025-10-12 16:31:46,567 | INFO     | mean y: 2470064.2075471696
[2025-10-12 12:32:34] 2025-10-12 16:31:46,567 | INFO     | -- intersect: -26829040458.412956
[2025-10-12 12:32:34] 2025-10-12 16:31:46,567 | INFO     | intersect: -26829040458.412956
[2025-10-12 12:32:34] 2025-10-12 16:31:46,568 | INFO     | chi2: 4.087261115703489
[2025-10-12 12:32:34] 2025-10-12 16:31:46,568 | INFO     | sum of square deviations: 9507693226.4473
[2025-10-12 12:32:34] 2025-10-12 16:31:46,572 | INFO     | sum of deviations: 169245465669.13098
[2025-10-12 12:32:34] 2025-10-12 16:31:46,572 | INFO     | mean x: 1760276853.3897765
[2025-10-12 12:32:34] 2025-10-12 16:31:46,572 | INFO     | mean y: 2475666.728434505
[2025-10-12 12:32:34] 2025-10-12 16:31:46,572 | INFO     | -- intersect: -31332030891.585022
[2025-10-12 12:32:34] 2025-10-12 16:31:46,572 | INFO     | intersect: -31332030891.585022
[2025-10-12 12:32:34] 2025-10-12 16:31:46,573 | INFO     | chi2: 3.4035397398187524
[2025-10-12 12:32:34] 2025-10-12 16:31:46,573 | INFO     | current chi2=3.4035397398187524 (change=16.728106096716957 %)
[2025-10-12 12:32:34] 2025-10-12 16:31:46,573 | INFO     | right removable region: 312
[2025-10-12 12:32:34] 2025-10-12 16:31:46,574 | INFO     | sum of square deviations: 9507618806.447302
[2025-10-12 12:32:34] 2025-10-12 16:31:46,577 | INFO     | sum of deviations: 67511255333.808304
[2025-10-12 12:32:34] 2025-10-12 16:31:46,577 | INFO     | mean x: 1760277158.3897765
[2025-10-12 12:32:34] 2025-10-12 16:31:46,577 | INFO     | mean y: 2497824.6900958465
[2025-10-12 12:32:34] 2025-10-12 16:31:46,578 | INFO     | -- intersect: -12496795964.595608
[2025-10-12 12:32:34] 2025-10-12 16:31:46,578 | INFO     | intersect: -12496795964.595608
[2025-10-12 12:32:34] 2025-10-12 16:31:46,578 | INFO     | chi2: 1.3970291636746826
[2025-10-12 12:32:34] 2025-10-12 16:31:46,578 | INFO     | current chi2=1.3970291636746826 (change=65.81991891080271 %)
[2025-10-12 12:32:34] 2025-10-12 16:31:46,579 | INFO     | sum of square deviations: 9059183466.246798
[2025-10-12 12:32:34] 2025-10-12 16:31:46,582 | INFO     | sum of deviations: 37602116759.694824
[2025-10-12 12:32:34] 2025-10-12 16:31:46,582 | INFO     | mean x: 1760277310.8896103
[2025-10-12 12:32:34] 2025-10-12 16:31:46,582 | INFO     | mean y: 2507995.3733766233
[2025-10-12 12:32:34] 2025-10-12 16:31:46,582 | INFO     | -- intersect: -7303906895.121738
[2025-10-12 12:32:34] 2025-10-12 16:31:46,583 | INFO     | intersect: -7303906895.121738
[2025-10-12 12:32:34] 2025-10-12 16:31:46,583 | INFO     | chi2: 1.0734605389424796
[2025-10-12 12:32:34] 2025-10-12 16:31:46,583 | INFO     | current chi2=1.0734605389424796 (change=23.161193276817688 %)
[2025-10-12 12:32:34] 2025-10-12 16:31:46,583 | INFO     | left removable region: 20
[2025-10-12 12:32:34] 2025-10-12 16:31:46,584 | INFO     | sum of square deviations: 7719427894.041063
[2025-10-12 12:32:34] 2025-10-12 16:31:46,587 | INFO     | sum of deviations: 20204682295.554806
[2025-10-12 12:32:34] 2025-10-12 16:31:46,587 | INFO     | mean x: 1760277432.8835616
[2025-10-12 12:32:34] 2025-10-12 16:31:46,587 | INFO     | mean y: 2527486.928082192
[2025-10-12 12:32:34] 2025-10-12 16:31:46,587 | INFO     | -- intersect: -4604788854.597935
[2025-10-12 12:32:34] 2025-10-12 16:31:46,587 | INFO     | intersect: -4604788854.597935
[2025-10-12 12:32:34] 2025-10-12 16:31:46,588 | INFO     | chi2: 0.12488573967796117
[2025-10-12 12:32:34] 2025-10-12 16:31:46,588 | INFO     | -- intersect: -4604788854.597935
[2025-10-12 12:32:34] 2025-10-12 16:31:46,588 | INFO     | current memory leak: 2.62 B/s (using 292 data points, chi2=0.12)
[2025-10-12 12:32:34] 2025-10-12 16:31:46,589 | INFO     | could have reported an average CPU frequency of 2600 MHz (14 samples)
[2025-10-12 12:32:34] 2025-10-12 16:31:46,589 | INFO     | ..............................
[2025-10-12 12:32:34] 2025-10-12 16:31:46,590 | INFO     | . Timing measurements:
[2025-10-12 12:32:34] 2025-10-12 16:31:46,590 | INFO     | . get job = 0 s
[2025-10-12 12:32:34] 2025-10-12 16:31:46,590 | INFO     | . initial setup = 7 s
[2025-10-12 12:32:34] 2025-10-12 16:31:46,590 | INFO     | . payload setup = 52 s
[2025-10-12 12:32:34] 2025-10-12 16:31:46,590 | INFO     | . stage-in = 0 s
[2025-10-12 12:32:34] 2025-10-12 16:31:46,590 | INFO     | . payload execution = 19392 s
[2025-10-12 12:32:34] 2025-10-12 16:31:46,590 | INFO     | . stage-out = 2 s
[2025-10-12 12:32:34] 2025-10-12 16:31:46,590 | INFO     | . log creation = 0 s
[2025-10-12 12:32:34] 2025-10-12 16:31:46,590 | INFO     | ..............................
[2025-10-12 12:32:34] 2025-10-12 16:31:46,709 | INFO     | 
[2025-10-12 12:32:34] 2025-10-12 16:31:46,709 | INFO     | job summary report
[2025-10-12 12:32:34] 2025-10-12 16:31:46,709 | INFO     | --------------------------------------------------
[2025-10-12 12:32:34] 2025-10-12 16:31:46,709 | INFO     | PanDA job id: 6839387598
[2025-10-12 12:32:34] 2025-10-12 16:31:46,710 | INFO     | task id: 46676269
[2025-10-12 12:32:34] 2025-10-12 16:31:46,710 | INFO     | errors: (none)
[2025-10-12 12:32:34] 2025-10-12 16:31:46,710 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:32:34] 2025-10-12 16:31:46,710 | INFO     | pilot state: finished 
[2025-10-12 12:32:34] 2025-10-12 16:31:46,710 | INFO     | transexitcode: 0
[2025-10-12 12:32:34] 2025-10-12 16:31:46,710 | INFO     | exeerrorcode: 0
[2025-10-12 12:32:34] 2025-10-12 16:31:46,710 | INFO     | exeerrordiag: 
[2025-10-12 12:32:34] 2025-10-12 16:31:46,710 | INFO     | exitcode: 0
[2025-10-12 12:32:34] 2025-10-12 16:31:46,710 | INFO     | exitmsg: OK
[2025-10-12 12:32:34] 2025-10-12 16:31:46,711 | INFO     | cpuconsumptiontime: 54202 s
[2025-10-12 12:32:34] 2025-10-12 16:31:46,711 | INFO     | nevents: 400
[2025-10-12 12:32:34] 2025-10-12 16:31:46,711 | INFO     | neventsw: 0
[2025-10-12 12:32:34] 2025-10-12 16:31:46,711 | INFO     | pid: 4162932
[2025-10-12 12:32:34] 2025-10-12 16:31:46,711 | INFO     | pgrp: 4162932
[2025-10-12 12:32:34] 2025-10-12 16:31:46,711 | INFO     | corecount: 8
[2025-10-12 12:32:34] 2025-10-12 16:31:46,711 | INFO     | event service: False
[2025-10-12 12:32:34] 2025-10-12 16:31:46,711 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 3: 2348770, 5: 2348941, 6: 2349153, 18: 2349153, 29: 2349181, 40: 2349209, 43: 2349499, 51: 2349527, 19448: 2383007, 19
[2025-10-12 12:32:34] 2025-10-12 16:31:46,711 | INFO     | --------------------------------------------------
[2025-10-12 12:32:34] 2025-10-12 16:31:46,712 | INFO     | 
[2025-10-12 12:32:34] 2025-10-12 16:31:46,712 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 12:32:34] 2025-10-12 16:31:46,735 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,736 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,736 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,736 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,736 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,736 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,736 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,736 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,736 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,736 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,737 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,737 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,737 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,737 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,737 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,737 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,737 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,737 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:32:34] 2025-10-12 16:31:46,737 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,738 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:32:34] 2025-10-12 16:31:46,738 | INFO     | job 6839387598 has completed (purged errors)
[2025-10-12 12:32:34] 2025-10-12 16:31:46,738 | INFO     | overall cleanup function is called
[2025-10-12 12:32:34] 2025-10-12 16:31:47,747 | INFO     | --- collectZombieJob: --- 10, [4162932]
[2025-10-12 12:32:34] 2025-10-12 16:31:47,747 | INFO     | zombie collector waiting for pid 4162932
[2025-10-12 12:32:34] 2025-10-12 16:31:47,747 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:32:34] 2025-10-12 16:31:47,747 | INFO     | collected zombie processes
[2025-10-12 12:32:34] 2025-10-12 16:31:47,747 | INFO     | will attempt to kill all subprocesses of pid=4162932
[2025-10-12 12:32:34] 2025-10-12 16:31:48,052 | INFO     | process IDs to be killed: [4162932] (in reverse order)
[2025-10-12 12:32:34] 2025-10-12 16:31:48,177 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:32:34] 2025-10-12 16:31:48,177 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:32:34] 2025-10-12 16:31:48,185 | INFO     | did not find any defunct processes belonging to 4162932
[2025-10-12 12:32:34] 2025-10-12 16:31:48,194 | INFO     | did not find any defunct processes belonging to 4162932
[2025-10-12 12:32:34] 2025-10-12 16:31:48,194 | INFO     | ready for new job
[2025-10-12 12:32:34] 2025-10-12 16:31:48,195 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:32:34] 2025-10-12 16:31:48,197 | INFO     | ***************************************
[2025-10-12 12:32:34] 2025-10-12 16:31:48,198 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:32:34] 2025-10-12 16:31:48,198 | INFO     | ***************************************
[2025-10-12 12:32:34] 2025-10-12 16:31:48,198 | INFO     | 
[2025-10-12 12:32:34] 2025-10-12 16:31:48,200 | INFO     | architecture information:
[2025-10-12 12:32:34] 2025-10-12 16:31:48,201 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:32:34] 2025-10-12 16:31:48,231 | INFO     | cat /etc/os-release:
[2025-10-12 12:32:34] NAME="CentOS Linux"
[2025-10-12 12:32:34] VERSION="7 (Core)"
[2025-10-12 12:32:34] ID="centos"
[2025-10-12 12:32:34] ID_LIKE="rhel fedora"
[2025-10-12 12:32:34] VERSION_ID="7"
[2025-10-12 12:32:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:32:34] ANSI_COLOR="0;31"
[2025-10-12 12:32:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:32:34] HOME_URL="https://www.centos.org/"
[2025-10-12 12:32:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:32:34] 
[2025-10-12 12:32:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:32:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:32:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:32:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:32:34] 
[2025-10-12 12:32:34] 2025-10-12 16:31:48,232 | INFO     | ***************************************
[2025-10-12 12:32:34] 2025-10-12 16:31:48,735 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 12:32:34] 2025-10-12 16:31:48,756 | INFO     | sufficient remaining disk space (53039071232 B)
[2025-10-12 12:32:34] 2025-10-12 16:31:48,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:32:34] 2025-10-12 16:31:48,757 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:32:34] 2025-10-12 16:31:48,757 | INFO     | update_server=False
[2025-10-12 12:32:34] 2025-10-12 16:31:48,757 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:32:34] 2025-10-12 16:31:48,758 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:32:34] 2025-10-12 16:31:48,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:32:34] 2025-10-12 16:31:48,929 | INFO     | all data control threads have been joined
[2025-10-12 12:32:34] 2025-10-12 16:31:48,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:32:34] 2025-10-12 16:31:48,963 | INFO     | aborting loop
[2025-10-12 12:32:34] 2025-10-12 16:31:49,058 | INFO     | all job control threads have been joined
[2025-10-12 12:32:34] 2025-10-12 16:31:49,763 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:32:34] 2025-10-12 16:31:49,807 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:32:34] 2025-10-12 16:31:49,850 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:32:34] 2025-10-12 16:31:49,934 | INFO     | [data] control thread has finished
[2025-10-12 12:32:34] 2025-10-12 16:31:49,969 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:32:34] 2025-10-12 16:31:49,995 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:32:34] 2025-10-12 16:31:50,048 | INFO     | all payload control threads have been joined
[2025-10-12 12:32:34] 2025-10-12 16:31:50,064 | INFO     | [job] control thread has finished
[2025-10-12 12:32:34] 2025-10-12 16:31:50,109 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:32:34] 2025-10-12 16:31:50,150 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:32:34] 2025-10-12 16:31:50,234 | INFO     | [job] validate thread has finished
[2025-10-12 12:32:34] 2025-10-12 16:31:50,649 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:32:34] 2025-10-12 16:31:50,765 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:32:34] 2025-10-12 16:31:51,067 | INFO     | [payload] control thread has finished
[2025-10-12 12:32:34] 2025-10-12 16:31:51,309 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:32:34] 2025-10-12 16:31:51,724 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:32:34] 2025-10-12 16:31:52,730 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:32:34] 2025-10-12 16:31:52,859 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:32:34] 2025-10-12 16:32:19,407 | INFO     | PID=4152850 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:32:34] 2025-10-12 16:32:19,407 | INFO     | .. there are 6 such processes running
[2025-10-12 12:32:34] 2025-10-12 16:32:19,407 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:32:34] 2025-10-12 16:32:19,407 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:32:34] 2025-10-12 16:32:19,408 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:32:34] 2025-10-12 16:32:27,862 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:32:34] 2025-10-12 16:32:29,457 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140177358718784)>', '<ExcThread(monitor, started 140176709900032)>']
[2025-10-12 12:32:34] 2025-10-12 16:32:29,489 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:32:34] 2025-10-12 16:32:29,489 | INFO     | [monitor] control thread has ended
[2025-10-12 12:32:34] 2025-10-12 16:32:34,483 | INFO     | all workflow threads have been joined
[2025-10-12 12:32:34] 2025-10-12 16:32:34,487 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:32:34] 2025-10-12 16:32:34,487 | INFO     | traces error code: 0
[2025-10-12 12:32:34] 2025-10-12 16:32:34,488 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:32:34] 2025-10-12 16:32:34,705 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:32:34] 2025-10-12 16:32:34,709 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:32:34] 2025-10-12 16:32:34,712 [wrapper] pilotpid: 4152850
[2025-10-12 12:32:34] 2025-10-12 16:32:34,715 [wrapper] Pilot exit status: 0
[2025-10-12 12:32:34] 2025-10-12 16:32:34,733 [wrapper] pandaids: 6839387598
[2025-10-12 12:32:34] 2025-10-12 16:32:34,783 [wrapper] cleanup supervisor_pilot  408352 4152851
[2025-10-12 12:32:34] 2025-10-12 16:32:34,786 [wrapper] Test setup, not cleaning
[2025-10-12 12:32:34] 2025-10-12 16:32:34,791 [wrapper] apfmon messages muted
[2025-10-12 12:32:34] 2025-10-12 16:32:34,795 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:32:34] 2025-10-12 16:32:34,799 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:32:34]  *** Error codes and diagnostics ***
[2025-10-12 12:32:34]     "exeErrorCode": 0,
[2025-10-12 12:32:34]     "exeErrorDiag": "",
[2025-10-12 12:32:34]     "pilotErrorCode": 0,
[2025-10-12 12:32:34]     "pilotErrorDiag": "",
[2025-10-12 12:32:34]  *** Listing of results directory ***
[2025-10-12 12:32:34] total 422312
[2025-10-12 12:32:34] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:38 pilot3.tar.gz
[2025-10-12 12:32:34] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 01:01 queuedata.json
[2025-10-12 12:32:34] -rwx------. 1 boincer umatlas     36292 Oct 12 01:01 runpilot2-wrapper.sh
[2025-10-12 12:32:34] -rw-r--r--. 1 boincer umatlas       100 Oct 12 07:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:32:34] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 07:04 run_atlas
[2025-10-12 12:32:34] -rw-r--r--. 1 boincer umatlas       105 Oct 12 07:04 job.xml
[2025-10-12 12:32:34] -rw-r--r--. 2 boincer umatlas 224014903 Oct 12 07:04 EVNT.46676267._004307.pool.root.1
[2025-10-12 12:32:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 07:04 start_atlas.sh
[2025-10-12 12:32:34] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 07:04 shared
[2025-10-12 12:32:34] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 07:04 input.tar.gz
[2025-10-12 12:32:34] -rw-r--r--. 1 boincer umatlas         0 Oct 12 07:04 boinc_lockfile
[2025-10-12 12:32:34] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 07:04 pandaJob.out
[2025-10-12 12:32:34] -rw-------. 1 boincer umatlas    975520 Oct 12 07:05 agis_schedconf.cvmfs.json
[2025-10-12 12:32:34] drwx------. 5 boincer umatlas      4096 Oct 12 07:05 pilot3
[2025-10-12 12:32:34] -rw-------. 1 boincer umatlas 198257160 Oct 12 12:30 HITS.46676269._071489.pool.root.1
[2025-10-12 12:32:34] -rw-r--r--. 1 boincer umatlas       531 Oct 12 12:31 boinc_task_state.xml
[2025-10-12 12:32:34] -rw-r--r--. 1 boincer umatlas      6660 Oct 12 12:31 init_data.xml
[2025-10-12 12:32:34] -rw-------. 1 boincer umatlas        95 Oct 12 12:31 pilot_heartbeat.json
[2025-10-12 12:32:34] -rw-------. 1 boincer umatlas      1043 Oct 12 12:31 memory_monitor_summary.json
[2025-10-12 12:32:34] -rw-------. 1 boincer umatlas   1560580 Oct 12 12:31 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:32:34] -rw-------. 1 boincer umatlas    537036 Oct 12 12:31 log.46676269._071489.job.log.tgz.1
[2025-10-12 12:32:34] -rw-------. 1 boincer umatlas      7830 Oct 12 12:31 heartbeat.json
[2025-10-12 12:32:34] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 12:32 boinc_mmap_file
[2025-10-12 12:32:34] -rw-r--r--. 1 boincer umatlas        28 Oct 12 12:32 wrapper_checkpoint.txt
[2025-10-12 12:32:34] -rw-------. 1 boincer umatlas      4823 Oct 12 12:32 pilotlog.txt
[2025-10-12 12:32:34] -rw-------. 1 boincer umatlas   2599307 Oct 12 12:32 log.46676269._071489.job.log.1
[2025-10-12 12:32:34] -rw-------. 1 boincer umatlas       357 Oct 12 12:32 output.list
[2025-10-12 12:32:34] -rw-r--r--. 1 boincer umatlas       620 Oct 12 12:32 runtime_log
[2025-10-12 12:32:34] -rw-------. 1 boincer umatlas   3153920 Oct 12 12:32 result.tar.gz
[2025-10-12 12:32:34] -rw-------. 1 boincer umatlas       657 Oct 12 12:32 VX9MDmuN3R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmuFTMDm0wfSum.diag
[2025-10-12 12:32:34] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 12:32 runtime_log.err
[2025-10-12 12:32:34] -rw-r--r--. 1 boincer umatlas     21258 Oct 12 12:32 stderr.txt
[2025-10-12 12:32:34] HITS file was successfully produced:
[2025-10-12 12:32:34] -rw-------. 1 boincer umatlas 198257160 Oct 12 12:30 shared/HITS.pool.root.1
[2025-10-12 12:32:34]  *** Contents of shared directory: ***
[2025-10-12 12:32:34] total 416040
[2025-10-12 12:32:34] -rw-r--r--. 2 boincer umatlas 224014903 Oct 12 07:04 ATLAS.root_0
[2025-10-12 12:32:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 07:04 start_atlas.sh
[2025-10-12 12:32:34] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 07:04 input.tar.gz
[2025-10-12 12:32:34] -rw-------. 1 boincer umatlas 198257160 Oct 12 12:30 HITS.pool.root.1
[2025-10-12 12:32:34] -rw-------. 1 boincer umatlas   3153920 Oct 12 12:32 result.tar.gz
12:32:36 (4148610): run_atlas exited; CPU time 54564.155843
12:32:36 (4148610): called boinc_finish(0)

</stderr_txt>
]]>

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