Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:02:58 (30199): wrapper (7.7.26015): starting
06:02:58 (30199): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 06:02:58] Arguments: --nthreads 8
[2025-10-12 06:02:58] Threads: 8
[2025-10-12 06:02:58] Checking for CVMFS
[2025-10-12 06:02:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:02:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:02:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:02:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:02:58] 2.11.2.0 3643 938 63624 151615 2 188 9779700 18432001 1833 130560 0 1512088 99.996 29242 31854 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 06:02:58] CVMFS is ok
[2025-10-12 06:02:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:02:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:02:58] Further information can be found at the LHC@home message board.
[2025-10-12 06:02:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:02:58] Checking for apptainer binary...
[2025-10-12 06:02:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:02:58] Running /usr/bin/apptainer --version
[2025-10-12 06:02:58] apptainer version 1.3.2-1.el7
[2025-10-12 06:02:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:02:59] c-206-15.aglt2.org
[2025-10-12 06:02:59] apptainer works
[2025-10-12 06:02:59] Set ATHENA_PROC_NUMBER=8
[2025-10-12 06:02:59] Set ATHENA_CORE_NUMBER=8
[2025-10-12 06:02:59] Starting ATLAS job with PandaID=6839387509
[2025-10-12 06:02:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:59:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:59:31] 2025-10-12 12:58:46,599 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 08:59:31] 2025-10-12 12:58:46,600 | INFO     | sum of deviations: 25704250760.0
[2025-10-12 08:59:31] 2025-10-12 12:58:46,600 | INFO     | mean x: 1760268658.0
[2025-10-12 08:59:31] 2025-10-12 12:58:46,600 | INFO     | mean y: 2439723.4393063583
[2025-10-12 08:59:31] 2025-10-12 12:58:46,600 | INFO     | -- intersect: -28180200946.004112
[2025-10-12 08:59:31] 2025-10-12 12:58:46,600 | INFO     | intersect: -28180200946.004112
[2025-10-12 08:59:31] 2025-10-12 12:58:46,600 | INFO     | chi2: 2.3344802749450033
[2025-10-12 08:59:31] 2025-10-12 12:58:46,601 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 08:59:31] 2025-10-12 12:58:46,601 | INFO     | sum of deviations: 36398150725.5
[2025-10-12 08:59:31] 2025-10-12 12:58:46,602 | INFO     | mean x: 1760268505.5
[2025-10-12 08:59:31] 2025-10-12 12:58:46,602 | INFO     | mean y: 2451474.113095238
[2025-10-12 08:59:31] 2025-10-12 12:58:46,602 | INFO     | -- intersect: -43575554725.17958
[2025-10-12 08:59:31] 2025-10-12 12:58:46,602 | INFO     | intersect: -43575554725.17958
[2025-10-12 08:59:31] 2025-10-12 12:58:46,602 | INFO     | chi2: 1.512587614027901
[2025-10-12 08:59:31] 2025-10-12 12:58:46,602 | INFO     | current chi2=1.512587614027901 (change=35.206665472316516 %)
[2025-10-12 08:59:31] 2025-10-12 12:58:46,603 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 08:59:31] 2025-10-12 12:58:46,603 | INFO     | sum of deviations: 35134513552.0
[2025-10-12 08:59:31] 2025-10-12 12:58:46,603 | INFO     | mean x: 1760268353.0
[2025-10-12 08:59:31] 2025-10-12 12:58:46,604 | INFO     | mean y: 2449960.7607361963
[2025-10-12 08:59:31] 2025-10-12 12:58:46,604 | INFO     | -- intersect: -46053732297.477715
[2025-10-12 08:59:31] 2025-10-12 12:58:46,604 | INFO     | intersect: -46053732297.477715
[2025-10-12 08:59:31] 2025-10-12 12:58:46,604 | INFO     | chi2: 1.5125922964818903
[2025-10-12 08:59:31] 2025-10-12 12:58:46,604 | INFO     | current chi2=1.5125922964818903 (change=-0.0003095658027202922 %)
[2025-10-12 08:59:31] 2025-10-12 12:58:46,604 | INFO     | right removable region: 162
[2025-10-12 08:59:31] 2025-10-12 12:58:46,604 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 08:59:31] 2025-10-12 12:58:46,605 | INFO     | sum of deviations: -2512344840.999998
[2025-10-12 08:59:31] 2025-10-12 12:58:46,605 | INFO     | mean x: 1760268810.5
[2025-10-12 08:59:31] 2025-10-12 12:58:46,605 | INFO     | mean y: 2471202.869047619
[2025-10-12 08:59:31] 2025-10-12 12:58:46,606 | INFO     | -- intersect: 3010398689.3928423
[2025-10-12 08:59:31] 2025-10-12 12:58:46,606 | INFO     | intersect: 3010398689.3928423
[2025-10-12 08:59:31] 2025-10-12 12:58:46,606 | INFO     | chi2: 0.8777706661380934
[2025-10-12 08:59:31] 2025-10-12 12:58:46,606 | INFO     | current chi2=0.8777706661380934 (change=62.39973943841645 %)
[2025-10-12 08:59:31] 2025-10-12 12:58:46,606 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 08:59:31] 2025-10-12 12:58:46,607 | INFO     | sum of deviations: -6306112717.000001
[2025-10-12 08:59:31] 2025-10-12 12:58:46,607 | INFO     | mean x: 1760268963.0
[2025-10-12 08:59:31] 2025-10-12 12:58:46,607 | INFO     | mean y: 2475678.8036809815
[2025-10-12 08:59:31] 2025-10-12 12:58:46,607 | INFO     | -- intersect: 8268865274.670576
[2025-10-12 08:59:31] 2025-10-12 12:58:46,608 | INFO     | intersect: 8268865274.670576
[2025-10-12 08:59:31] 2025-10-12 12:58:46,608 | INFO     | chi2: 0.8455562932952685
[2025-10-12 08:59:31] 2025-10-12 12:58:46,608 | INFO     | current chi2=0.8455562932952685 (change=3.6700215768838254 %)
[2025-10-12 08:59:31] 2025-10-12 12:58:46,608 | INFO     | left removable region: 20
[2025-10-12 08:59:31] 2025-10-12 12:58:46,608 | INFO     | sum of square deviations: 887813855.5
[2025-10-12 08:59:31] 2025-10-12 12:58:46,609 | INFO     | sum of deviations: 3371605023.5
[2025-10-12 08:59:31] 2025-10-12 12:58:46,609 | INFO     | mean x: 1760268932.5
[2025-10-12 08:59:31] 2025-10-12 12:58:46,609 | INFO     | mean y: 2490315.0774647887
[2025-10-12 08:59:31] 2025-10-12 12:58:46,609 | INFO     | -- intersect: -6682392488.6331625
[2025-10-12 08:59:31] 2025-10-12 12:58:46,609 | INFO     | intersect: -6682392488.6331625
[2025-10-12 08:59:31] 2025-10-12 12:58:46,610 | INFO     | chi2: 0.00032594865413544075
[2025-10-12 08:59:31] 2025-10-12 12:58:46,610 | INFO     | -- intersect: -6682392488.6331625
[2025-10-12 08:59:31] 2025-10-12 12:58:46,610 | INFO     | current memory leak: 3.80 B/s (using 142 data points, chi2=0.00)
[2025-10-12 08:59:31] 2025-10-12 12:58:46,610 | INFO     | could have reported an average CPU frequency of 2455 MHz (9 samples)
[2025-10-12 08:59:31] 2025-10-12 12:58:46,610 | INFO     | ..............................
[2025-10-12 08:59:31] 2025-10-12 12:58:46,610 | INFO     | . Timing measurements:
[2025-10-12 08:59:31] 2025-10-12 12:58:46,611 | INFO     | . get job = 0 s
[2025-10-12 08:59:31] 2025-10-12 12:58:46,611 | INFO     | . initial setup = 2 s
[2025-10-12 08:59:31] 2025-10-12 12:58:46,611 | INFO     | . payload setup = 4 s
[2025-10-12 08:59:31] 2025-10-12 12:58:46,611 | INFO     | . stage-in = 0 s
[2025-10-12 08:59:31] 2025-10-12 12:58:46,611 | INFO     | . payload execution = 10504 s
[2025-10-12 08:59:31] 2025-10-12 12:58:46,611 | INFO     | . stage-out = 0 s
[2025-10-12 08:59:31] 2025-10-12 12:58:46,611 | INFO     | . log creation = 0 s
[2025-10-12 08:59:31] 2025-10-12 12:58:46,611 | INFO     | ..............................
[2025-10-12 08:59:31] 2025-10-12 12:58:46,755 | INFO     | 
[2025-10-12 08:59:31] 2025-10-12 12:58:46,760 | INFO     | job summary report
[2025-10-12 08:59:31] 2025-10-12 12:58:46,761 | INFO     | --------------------------------------------------
[2025-10-12 08:59:31] 2025-10-12 12:58:46,761 | INFO     | PanDA job id: 6839387509
[2025-10-12 08:59:31] 2025-10-12 12:58:46,761 | INFO     | task id: 46676269
[2025-10-12 08:59:31] 2025-10-12 12:58:46,761 | INFO     | errors: (none)
[2025-10-12 08:59:31] 2025-10-12 12:58:46,762 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:59:31] 2025-10-12 12:58:46,762 | INFO     | pilot state: finished 
[2025-10-12 08:59:31] 2025-10-12 12:58:46,762 | INFO     | transexitcode: 0
[2025-10-12 08:59:31] 2025-10-12 12:58:46,762 | INFO     | exeerrorcode: 0
[2025-10-12 08:59:31] 2025-10-12 12:58:46,762 | INFO     | exeerrordiag: 
[2025-10-12 08:59:31] 2025-10-12 12:58:46,763 | INFO     | exitcode: 0
[2025-10-12 08:59:31] 2025-10-12 12:58:46,763 | INFO     | exitmsg: OK
[2025-10-12 08:59:31] 2025-10-12 12:58:46,763 | INFO     | cpuconsumptiontime: 79055 s
[2025-10-12 08:59:31] 2025-10-12 12:58:46,763 | INFO     | nevents: 400
[2025-10-12 08:59:31] 2025-10-12 12:58:46,763 | INFO     | neventsw: 0
[2025-10-12 08:59:31] 2025-10-12 12:58:46,764 | INFO     | pid: 8032
[2025-10-12 08:59:31] 2025-10-12 12:58:46,764 | INFO     | pgrp: 8032
[2025-10-12 08:59:31] 2025-10-12 12:58:46,764 | INFO     | corecount: 8
[2025-10-12 08:59:31] 2025-10-12 12:58:46,764 | INFO     | event service: False
[2025-10-12 08:59:31] 2025-10-12 12:58:46,764 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 11: 2349175, 10513: 2377976, 10515: 2386974, 10518: 2387158, 10524: 2387416}
[2025-10-12 08:59:31] 2025-10-12 12:58:46,765 | INFO     | --------------------------------------------------
[2025-10-12 08:59:31] 2025-10-12 12:58:46,765 | INFO     | 
[2025-10-12 08:59:31] 2025-10-12 12:58:46,766 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 08:59:31] 2025-10-12 12:58:46,784 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,785 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,785 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,785 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,787 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,787 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,787 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,787 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,788 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,788 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,788 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:59:31] 2025-10-12 12:58:46,788 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,789 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:59:31] 2025-10-12 12:58:46,789 | INFO     | job 6839387509 has completed (purged errors)
[2025-10-12 08:59:31] 2025-10-12 12:58:46,789 | INFO     | overall cleanup function is called
[2025-10-12 08:59:31] 2025-10-12 12:58:47,798 | INFO     | --- collectZombieJob: --- 10, [8032]
[2025-10-12 08:59:31] 2025-10-12 12:58:47,798 | INFO     | zombie collector waiting for pid 8032
[2025-10-12 08:59:31] 2025-10-12 12:58:47,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:59:31] 2025-10-12 12:58:47,798 | INFO     | collected zombie processes
[2025-10-12 08:59:31] 2025-10-12 12:58:47,799 | INFO     | will attempt to kill all subprocesses of pid=8032
[2025-10-12 08:59:31] 2025-10-12 12:58:47,966 | INFO     | process IDs to be killed: [8032] (in reverse order)
[2025-10-12 08:59:31] 2025-10-12 12:58:48,011 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:59:31] 2025-10-12 12:58:48,012 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:59:31] 2025-10-12 12:58:48,017 | INFO     | did not find any defunct processes belonging to 8032
[2025-10-12 08:59:31] 2025-10-12 12:58:48,022 | INFO     | did not find any defunct processes belonging to 8032
[2025-10-12 08:59:31] 2025-10-12 12:58:48,022 | INFO     | ready for new job
[2025-10-12 08:59:31] 2025-10-12 12:58:48,022 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:59:31] 2025-10-12 12:58:48,024 | INFO     | ***************************************
[2025-10-12 08:59:31] 2025-10-12 12:58:48,025 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:59:31] 2025-10-12 12:58:48,025 | INFO     | ***************************************
[2025-10-12 08:59:31] 2025-10-12 12:58:48,025 | INFO     | 
[2025-10-12 08:59:31] 2025-10-12 12:58:48,026 | INFO     | architecture information:
[2025-10-12 08:59:31] 2025-10-12 12:58:48,027 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:59:31] 2025-10-12 12:58:48,039 | INFO     | cat /etc/os-release:
[2025-10-12 08:59:31] NAME="CentOS Linux"
[2025-10-12 08:59:31] VERSION="7 (Core)"
[2025-10-12 08:59:31] ID="centos"
[2025-10-12 08:59:31] ID_LIKE="rhel fedora"
[2025-10-12 08:59:31] VERSION_ID="7"
[2025-10-12 08:59:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:59:31] ANSI_COLOR="0;31"
[2025-10-12 08:59:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:59:31] HOME_URL="https://www.centos.org/"
[2025-10-12 08:59:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:59:31] 
[2025-10-12 08:59:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:59:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:59:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:59:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:59:31] 
[2025-10-12 08:59:31] 2025-10-12 12:58:48,039 | INFO     | ***************************************
[2025-10-12 08:59:31] 2025-10-12 12:58:48,542 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 08:59:31] 2025-10-12 12:58:48,557 | INFO     | sufficient remaining disk space (28272754688 B)
[2025-10-12 08:59:31] 2025-10-12 12:58:48,557 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:59:31] 2025-10-12 12:58:48,558 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:59:31] 2025-10-12 12:58:48,558 | INFO     | update_server=False
[2025-10-12 08:59:31] 2025-10-12 12:58:48,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:59:31] 2025-10-12 12:58:48,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:59:31] 2025-10-12 12:58:48,559 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:59:31] 2025-10-12 12:58:48,607 | INFO     | all data control threads have been joined
[2025-10-12 08:59:31] 2025-10-12 12:58:48,795 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 08:59:31] 2025-10-12 12:58:48,795 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 08:59:31] 2025-10-12 12:58:48,796 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:59:31] 2025-10-12 12:58:48,796 | INFO     | will abort loop
[2025-10-12 08:59:31] 2025-10-12 12:58:48,839 | INFO     | all payload control threads have been joined
[2025-10-12 08:59:31] 2025-10-12 12:58:49,354 | INFO     | all job control threads have been joined
[2025-10-12 08:59:31] 2025-10-12 12:58:49,564 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:59:31] 2025-10-12 12:58:49,565 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:59:31] 2025-10-12 12:58:49,612 | INFO     | [data] control thread has finished
[2025-10-12 08:59:31] 2025-10-12 12:58:49,671 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:59:31] 2025-10-12 12:58:49,801 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:59:31] 2025-10-12 12:58:49,806 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:59:31] 2025-10-12 12:58:49,846 | INFO     | [payload] control thread has finished
[2025-10-12 08:59:31] 2025-10-12 12:58:50,181 | INFO     | [job] validate thread has finished
[2025-10-12 08:59:31] 2025-10-12 12:58:50,302 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:59:31] 2025-10-12 12:58:50,360 | INFO     | [job] control thread has finished
[2025-10-12 08:59:31] 2025-10-12 12:58:50,377 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:59:31] 2025-10-12 12:58:50,384 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:59:31] 2025-10-12 12:58:50,404 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:59:31] 2025-10-12 12:58:50,565 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:59:31] 2025-10-12 12:58:51,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:59:31] 2025-10-12 12:58:55,757 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:59:31] 2025-10-12 12:58:58,860 | INFO     | job.realtimelogging is not enabled
[2025-10-12 08:59:31] 2025-10-12 12:58:59,867 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:59:31] 2025-10-12 12:59:18,390 | INFO     | 10541s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 08:59:31] 2025-10-12 12:59:19,591 | INFO     | PID=1504 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 08:59:31] 2025-10-12 12:59:19,591 | INFO     | .. there are 3 such processes running
[2025-10-12 08:59:31] 2025-10-12 12:59:19,591 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:59:31] 2025-10-12 12:59:19,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:59:31] 2025-10-12 12:59:19,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:59:31] 2025-10-12 12:59:25,626 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:59:31] 2025-10-12 12:59:25,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139676976445248)>', '<ExcThread(monitor, started 139676379748096)>']
[2025-10-12 08:59:31] 2025-10-12 12:59:26,625 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:59:31] 2025-10-12 12:59:26,625 | INFO     | [monitor] control thread has ended
[2025-10-12 08:59:31] 2025-10-12 12:59:30,697 | INFO     | all workflow threads have been joined
[2025-10-12 08:59:31] 2025-10-12 12:59:30,697 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:59:31] 2025-10-12 12:59:30,697 | INFO     | traces error code: 0
[2025-10-12 08:59:31] 2025-10-12 12:59:30,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:59:31] 2025-10-12 12:59:30,838 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:59:31] 2025-10-12 12:59:30,841 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:59:31] 2025-10-12 12:59:30,845 [wrapper] pilotpid: 1504
[2025-10-12 08:59:31] 2025-10-12 12:59:30,847 [wrapper] Pilot exit status: 0
[2025-10-12 08:59:31] 2025-10-12 12:59:30,856 [wrapper] pandaids: 6839387509
[2025-10-12 08:59:31] 2025-10-12 12:59:30,884 [wrapper] cleanup supervisor_pilot  7905 1509
[2025-10-12 08:59:31] 2025-10-12 12:59:30,886 [wrapper] Test setup, not cleaning
[2025-10-12 08:59:31] 2025-10-12 12:59:30,888 [wrapper] apfmon messages muted
[2025-10-12 08:59:31] 2025-10-12 12:59:30,890 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:59:31] 2025-10-12 12:59:30,893 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:59:31]  *** Error codes and diagnostics ***
[2025-10-12 08:59:31]     "exeErrorCode": 0,
[2025-10-12 08:59:31]     "exeErrorDiag": "",
[2025-10-12 08:59:31]     "pilotErrorCode": 0,
[2025-10-12 08:59:31]     "pilotErrorDiag": "",
[2025-10-12 08:59:31]  *** Listing of results directory ***
[2025-10-12 08:59:31] total 409340
[2025-10-12 08:59:31] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 00:38 pilot3.tar.gz
[2025-10-12 08:59:31] -rwx------ 1 boincer umatlas     36292 Oct 12 00:48 runpilot2-wrapper.sh
[2025-10-12 08:59:31] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 00:48 queuedata.json
[2025-10-12 08:59:31] -rw-r--r-- 1 boincer umatlas       100 Oct 12 06:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:59:31] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 06:02 run_atlas
[2025-10-12 08:59:31] -rw-r--r-- 1 boincer umatlas       105 Oct 12 06:02 job.xml
[2025-10-12 08:59:31] -rw-r--r-- 2 boincer umatlas 222029285 Oct 12 06:02 EVNT.46676267._004303.pool.root.1
[2025-10-12 08:59:31] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 06:02 start_atlas.sh
[2025-10-12 08:59:31] drwxrwx--x 2 boincer umatlas      4096 Oct 12 06:02 shared
[2025-10-12 08:59:31] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 06:02 input.tar.gz
[2025-10-12 08:59:31] -rw-r--r-- 1 boincer umatlas         0 Oct 12 06:02 boinc_lockfile
[2025-10-12 08:59:31] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 06:02 pandaJob.out
[2025-10-12 08:59:31] -rw------- 1 boincer umatlas    975536 Oct 12 06:03 agis_schedconf.cvmfs.json
[2025-10-12 08:59:31] -rw------- 1 boincer umatlas   1560580 Oct 12 06:03 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:59:31] drwx------ 5 boincer umatlas      4096 Oct 12 06:03 pilot3
[2025-10-12 08:59:31] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 08:54 init_data.xml
[2025-10-12 08:59:31] -rw------- 1 boincer umatlas 189423947 Oct 12 08:58 HITS.46676269._071400.pool.root.1
[2025-10-12 08:59:31] -rw-r--r-- 1 boincer umatlas       531 Oct 12 08:58 boinc_task_state.xml
[2025-10-12 08:59:31] -rw------- 1 boincer umatlas      1054 Oct 12 08:58 memory_monitor_summary.json
[2025-10-12 08:59:31] -rw------- 1 boincer umatlas    424256 Oct 12 08:58 log.46676269._071400.job.log.tgz.1
[2025-10-12 08:59:31] -rw------- 1 boincer umatlas        95 Oct 12 08:58 pilot_heartbeat.json
[2025-10-12 08:59:31] -rw------- 1 boincer umatlas      7855 Oct 12 08:58 heartbeat.json
[2025-10-12 08:59:31] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 08:58 boinc_mmap_file
[2025-10-12 08:59:31] -rw-r--r-- 1 boincer umatlas        28 Oct 12 08:58 wrapper_checkpoint.txt
[2025-10-12 08:59:31] -rw------- 1 boincer umatlas      5194 Oct 12 08:59 pilotlog.txt
[2025-10-12 08:59:31] -rw------- 1 boincer umatlas   1478019 Oct 12 08:59 log.46676269._071400.job.log.1
[2025-10-12 08:59:31] -rw------- 1 boincer umatlas       357 Oct 12 08:59 output.list
[2025-10-12 08:59:31] -rw-r--r-- 1 boincer umatlas       620 Oct 12 08:59 runtime_log
[2025-10-12 08:59:31] -rw------- 1 boincer umatlas   1925120 Oct 12 08:59 result.tar.gz
[2025-10-12 08:59:31] -rw------- 1 boincer umatlas       661 Oct 12 08:59 u1gMDmzB3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoeiNDmz7Hwhn.diag
[2025-10-12 08:59:31] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 08:59 runtime_log.err
[2025-10-12 08:59:31] -rw-r--r-- 1 boincer umatlas     20937 Oct 12 08:59 stderr.txt
[2025-10-12 08:59:31] HITS file was successfully produced:
[2025-10-12 08:59:31] -rw------- 1 boincer umatlas 189423947 Oct 12 08:58 shared/HITS.pool.root.1
[2025-10-12 08:59:31]  *** Contents of shared directory: ***
[2025-10-12 08:59:31] total 404276
[2025-10-12 08:59:31] -rw-r--r-- 2 boincer umatlas 222029285 Oct 12 06:02 ATLAS.root_0
[2025-10-12 08:59:31] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 06:02 start_atlas.sh
[2025-10-12 08:59:31] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 06:02 input.tar.gz
[2025-10-12 08:59:31] -rw------- 1 boincer umatlas 189423947 Oct 12 08:58 HITS.pool.root.1
[2025-10-12 08:59:31] -rw------- 1 boincer umatlas   1925120 Oct 12 08:59 result.tar.gz
08:59:32 (30199): run_atlas exited; CPU time 79177.301595
08:59:32 (30199): called boinc_finish(0)

</stderr_txt>
]]>

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