Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:17:43 (662797): wrapper (7.7.26015): starting
03:17:43 (662797): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 03:17:43] Arguments: --nthreads 12
[2025-10-12 03:17:43] Threads: 12
[2025-10-12 03:17:43] Checking for CVMFS
[2025-10-12 03:17:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 03:17:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 03:17:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 03:17:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 03:17:45] 2.11.5.0 2096 29789 336084 151617 2 291 26179530 45568001 16721 130560 0 310999686 99.875 124141178 25293 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-10-12 03:17:45] CVMFS is ok
[2025-10-12 03:17:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 03:17:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 03:17:45] Further information can be found at the LHC@home message board.
[2025-10-12 03:17:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:17:45] Checking for apptainer binary...
[2025-10-12 03:17:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 03:17:45] Running /usr/bin/apptainer --version
[2025-10-12 03:17:45] apptainer version 1.4.1-1.el9
[2025-10-12 03:17:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:17:45] wns0053.triumf.lcg
[2025-10-12 03:17:45] apptainer works
[2025-10-12 03:17:46] Set ATHENA_PROC_NUMBER=12
[2025-10-12 03:17:46] Set ATHENA_CORE_NUMBER=12
[2025-10-12 03:17:46] Starting ATLAS job with PandaID=6839659699
[2025-10-12 03:17:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 03:23:24]  *** The last 200 lines of the pilot log: ***
[2025-10-12 03:23:24] 2025-10-12 10:22:20,318 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:23:24] 2025-10-12 10:22:20,318 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:23:24] 2025-10-12 10:22:20,318 | WARNING  | wrong length of table data, x=[1760264368.0], y=[1205.0] (must be same and length>=4)
[2025-10-12 03:23:24] 2025-10-12 10:22:20,318 | INFO     | could have reported an average CPU frequency of 2546 MHz (4 samples)
[2025-10-12 03:23:24] 2025-10-12 10:22:20,318 | INFO     | ..............................
[2025-10-12 03:23:24] 2025-10-12 10:22:20,319 | INFO     | . Timing measurements:
[2025-10-12 03:23:24] 2025-10-12 10:22:20,319 | INFO     | . get job = 0 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,319 | INFO     | . initial setup = 4 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,319 | INFO     | . payload setup = 18 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,319 | INFO     | . stage-in = 0 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | . payload execution = 49 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | . stage-out = 0 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | . log creation = 0 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | ..............................
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839659699/pilotlog.txt
[2025-10-12 03:23:24] 2025-10-12 10:22:20,350 | INFO     | time since job start (243s) is within the limit (172800.0s)
[2025-10-12 03:23:24] 2025-10-12 10:22:20,379 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 03:23:24] - Log from pilotlog.txt -
[2025-10-12 03:23:24] 2025-10-12 10:22:20,317 | INFO     | extracted standard info from prmon json
[2025-10-12 03:23:24] 2025-10-12 10:22:20,317 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 03:23:24] 2025-10-12 10:22:20,317 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 03:23:24] 2025-10-12 10:22:20,318 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:23:24] 2025-10-12 10:22:20,318 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:23:24] 2025-10-12 10:22:20,318 | WARNING  | wrong length of table data, x=[1760264368.0], y=[1205.0] (must be same and length>=4)
[2025-10-12 03:23:24] 2025-10-12 10:22:20,318 | INFO     | could have reported an average CPU frequency of 2546 MHz (4 samples)
[2025-10-12 03:23:24] 2025-10-12 10:22:20,318 | INFO     | ..............................
[2025-10-12 03:23:24] 2025-10-12 10:22:20,319 | INFO     | . Timing measurements:
[2025-10-12 03:23:24] 2025-10-12 10:22:20,319 | INFO     | . get job = 0 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,319 | INFO     | . initial setup = 4 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,319 | INFO     | . payload setup = 18 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,319 | INFO     | . stage-in = 0 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | . payload execution = 49 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | . stage-out = 0 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | . log creation = 0 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | ..............................
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839659699/pilotlog.txt
[2025-10-12 03:23:24] 2025-10-12 10:22:20,350 | INFO     | time since job start (243s) is within the limit (172800.0s)
[2025-10-12 03:23:24] 2025-10-12 10:22:20,379 | WARNING  | 
[2025-10-12 03:23:24] [begin log extracts]
[2025-10-12 03:23:24] - Log from pilotlog.txt -
[2025-10-12 03:23:24] 2025-10-12 10:22:20,317 | INFO     | extracted standard info from prmon json
[2025-10-12 03:23:24] 2025-10-12 10:22:20,317 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 03:23:24] 2025-10-12 10:22:20,317 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 03:23:24] 2025-10-12 10:22:20,318 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:23:24] 2025-10-12 10:22:20,318 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:23:24] 2025-10-12 10:22:20,318 | WARNING  | wrong length of table data, x=[1760264368.0], y=[1205.0] (must be same and length>=4)
[2025-10-12 03:23:24] 2025-10-12 10:22:20,318 | INFO     | could have reported an average CPU frequency of 2546 MHz (4 samples)
[2025-10-12 03:23:24] 2025-10-12 10:22:20,318 | INFO     | ..............................
[2025-10-12 03:23:24] 2025-10-12 10:22:20,319 | INFO     | . Timing measurements:
[2025-10-12 03:23:24] 2025-10-12 10:22:20,319 | INFO     | . get job = 0 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,319 | INFO     | . initial setup = 4 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,319 | INFO     | . payload setup = 18 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,319 | INFO     | . stage-in = 0 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | . payload execution = 49 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | . stage-out = 0 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | . log creation = 0 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | ..............................
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 03:23:24] 2025-10-12 10:22:20,323 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839659699/pilotlog.txt
[2025-10-12 03:23:24] 2025-10-12 10:22:20,350 | INFO     | time since job start (243s) is within the limit (172800.0s)
[2025-10-12 03:23:24] [end log extracts]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,379 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 03:23:24] 2025-10-12 10:22:20,380 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 03:23:24] 2025-10-12 10:22:20,621 | INFO     | 
[2025-10-12 03:23:24] 2025-10-12 10:22:20,621 | INFO     | job summary report
[2025-10-12 03:23:24] 2025-10-12 10:22:20,621 | INFO     | --------------------------------------------------
[2025-10-12 03:23:24] 2025-10-12 10:22:20,621 | INFO     | PanDA job id: 6839659699
[2025-10-12 03:23:24] 2025-10-12 10:22:20,623 | INFO     | task id: 46676269
[2025-10-12 03:23:24] 2025-10-12 10:22:20,623 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 03:19:54,203 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 03:23:24] 2025-10-12 10:22:20,623 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 03:23:24] 2025-10-12 10:22:20,623 | INFO     | pilot state: failed 
[2025-10-12 03:23:24] 2025-10-12 10:22:20,623 | INFO     | transexitcode: 65
[2025-10-12 03:23:24] 2025-10-12 10:22:20,623 | INFO     | exeerrorcode: 65
[2025-10-12 03:23:24] 2025-10-12 10:22:20,623 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 03:23:24] 2025-10-12 10:22:20,623 | INFO     | exitcode: 65
[2025-10-12 03:23:24] 2025-10-12 10:22:20,623 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 03:23:24] 2025-10-12 10:22:20,623 | INFO     | cpuconsumptiontime: 18 s
[2025-10-12 03:23:24] 2025-10-12 10:22:20,623 | INFO     | nevents: 0
[2025-10-12 03:23:24] 2025-10-12 10:22:20,623 | INFO     | neventsw: 0
[2025-10-12 03:23:24] 2025-10-12 10:22:20,623 | INFO     | pid: 673327
[2025-10-12 03:23:24] 2025-10-12 10:22:20,623 | INFO     | pgrp: 673327
[2025-10-12 03:23:24] 2025-10-12 10:22:20,624 | INFO     | corecount: 12
[2025-10-12 03:23:24] 2025-10-12 10:22:20,624 | INFO     | event service: False
[2025-10-12 03:23:24] 2025-10-12 10:22:20,636 | INFO     | sizes: {0: 2348854, 11: 2348854, 15: 2349144, 22: 2349172, 71: 2372433, 72: 2376725, 76: 2376881, 209: 2377075}
[2025-10-12 03:23:24] 2025-10-12 10:22:20,636 | INFO     | --------------------------------------------------
[2025-10-12 03:23:24] 2025-10-12 10:22:20,636 | INFO     | 
[2025-10-12 03:23:24] 2025-10-12 10:22:20,636 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 03:23:24] 2025-10-12 10:22:20,714 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,715 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,715 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,715 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,715 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,715 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,715 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,715 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,715 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,715 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,715 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,715 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,715 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,716 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,716 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,716 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,716 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,716 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 03:23:24] 2025-10-12 10:22:20,716 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,716 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 03:23:24] 2025-10-12 10:22:20,716 | INFO     | job 6839659699 has completed (purged errors)
[2025-10-12 03:23:24] 2025-10-12 10:22:20,716 | INFO     | overall cleanup function is called
[2025-10-12 03:23:24] 2025-10-12 10:22:21,728 | INFO     | --- collectZombieJob: --- 10, [673327]
[2025-10-12 03:23:24] 2025-10-12 10:22:21,728 | INFO     | zombie collector waiting for pid 673327
[2025-10-12 03:23:24] 2025-10-12 10:22:21,728 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 03:23:24] 2025-10-12 10:22:21,729 | INFO     | collected zombie processes
[2025-10-12 03:23:24] 2025-10-12 10:22:21,729 | INFO     | will attempt to kill all subprocesses of pid=673327
[2025-10-12 03:23:24] 2025-10-12 10:22:22,135 | INFO     | process IDs to be killed: [673327] (in reverse order)
[2025-10-12 03:23:24] 2025-10-12 10:22:22,275 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 03:23:24] 2025-10-12 10:22:22,276 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 03:23:24] 2025-10-12 10:22:22,288 | INFO     | did not find any defunct processes belonging to 673327
[2025-10-12 03:23:24] 2025-10-12 10:22:22,300 | INFO     | did not find any defunct processes belonging to 673327
[2025-10-12 03:23:24] 2025-10-12 10:22:22,300 | INFO     | ready for new job
[2025-10-12 03:23:24] 2025-10-12 10:22:22,301 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 03:23:24] 2025-10-12 10:22:22,303 | INFO     | ***************************************
[2025-10-12 03:23:24] 2025-10-12 10:22:22,304 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 03:23:24] 2025-10-12 10:22:22,304 | INFO     | ***************************************
[2025-10-12 03:23:24] 2025-10-12 10:22:22,304 | INFO     | 
[2025-10-12 03:23:24] 2025-10-12 10:22:22,306 | INFO     | architecture information:
[2025-10-12 03:23:24] 2025-10-12 10:22:22,306 | INFO     | executing command: cat /etc/os-release
[2025-10-12 03:23:24] 2025-10-12 10:22:22,335 | INFO     | cat /etc/os-release:
[2025-10-12 03:23:24] NAME="CentOS Linux"
[2025-10-12 03:23:24] VERSION="7 (Core)"
[2025-10-12 03:23:24] ID="centos"
[2025-10-12 03:23:24] ID_LIKE="rhel fedora"
[2025-10-12 03:23:24] VERSION_ID="7"
[2025-10-12 03:23:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 03:23:24] ANSI_COLOR="0;31"
[2025-10-12 03:23:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 03:23:24] HOME_URL="https://www.centos.org/"
[2025-10-12 03:23:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 03:23:24] 
[2025-10-12 03:23:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 03:23:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 03:23:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 03:23:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 03:23:24] 
[2025-10-12 03:23:24] 2025-10-12 10:22:22,335 | INFO     | ***************************************
[2025-10-12 03:23:24] 2025-10-12 10:22:22,841 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 03:23:24] 2025-10-12 10:22:22,880 | INFO     | sufficient remaining disk space (1975981703168 B)
[2025-10-12 03:23:24] 2025-10-12 10:22:22,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 03:23:24] 2025-10-12 10:22:22,883 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 03:23:24] 2025-10-12 10:22:22,883 | INFO     | update_server=False
[2025-10-12 03:23:24] 2025-10-12 10:22:22,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 03:23:24] 2025-10-12 10:22:22,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:23:24] 2025-10-12 10:22:22,887 | INFO     | aborting loop
[2025-10-12 03:23:24] 2025-10-12 10:22:22,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 03:23:24] 2025-10-12 10:22:23,185 | INFO     | all data control threads have been joined
[2025-10-12 03:23:24] 2025-10-12 10:22:23,257 | INFO     | all payload control threads have been joined
[2025-10-12 03:23:24] 2025-10-12 10:22:23,626 | INFO     | all job control threads have been joined
[2025-10-12 03:23:24] 2025-10-12 10:22:23,889 | INFO     | [job] retrieve thread has finished
[2025-10-12 03:23:24] 2025-10-12 10:22:23,893 | INFO     | [job] job monitor thread has finished
[2025-10-12 03:23:24] 2025-10-12 10:22:24,079 | INFO     | [payload] failed_post thread has finished
[2025-10-12 03:23:24] 2025-10-12 10:22:24,092 | INFO     | [payload] validate_post thread has finished
[2025-10-12 03:23:24] 2025-10-12 10:22:24,113 | INFO     | [data] copytool_in thread has finished
[2025-10-12 03:23:24] 2025-10-12 10:22:24,191 | INFO     | [data] control thread has finished
[2025-10-12 03:23:24] 2025-10-12 10:22:24,224 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 03:23:24] 2025-10-12 10:22:24,273 | INFO     | [payload] control thread has finished
[2025-10-12 03:23:24] 2025-10-12 10:22:24,332 | INFO     | [job] validate thread has finished
[2025-10-12 03:23:24] 2025-10-12 10:22:24,633 | INFO     | [job] control thread has finished
[2025-10-12 03:23:24] 2025-10-12 10:22:24,691 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 03:23:24] 2025-10-12 10:22:24,833 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 03:23:24] 2025-10-12 10:22:24,908 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 03:23:24] 2025-10-12 10:22:24,960 | INFO     | [data] copytool_out thread has finished
[2025-10-12 03:23:24] 2025-10-12 10:22:25,222 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 03:23:24] 2025-10-12 10:22:25,641 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:23:24] 2025-10-12 10:22:26,650 | INFO     | [job] queue monitor thread has finished
[2025-10-12 03:23:24] 2025-10-12 10:22:28,841 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 03:23:24] 2025-10-12 10:22:53,748 | INFO     | PID=666584 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 03:23:24] 2025-10-12 10:22:53,748 | INFO     | .. there are 34 such processes running
[2025-10-12 03:23:24] 2025-10-12 10:22:53,749 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 03:23:24] 2025-10-12 10:22:53,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 03:23:24] 2025-10-12 10:22:53,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 03:23:24] 2025-10-12 10:23:17,375 | INFO     | [monitor] cgroup control has ended
[2025-10-12 03:23:24] 2025-10-12 10:23:18,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139958540150592)>', '<ExcThread(monitor, started 139958002112256)>']
[2025-10-12 03:23:24] 2025-10-12 10:23:18,902 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 03:23:24] 2025-10-12 10:23:18,902 | INFO     | [monitor] control thread has ended
[2025-10-12 03:23:24] 2025-10-12 10:23:23,868 | INFO     | all workflow threads have been joined
[2025-10-12 03:23:24] 2025-10-12 10:23:23,869 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 03:23:24] 2025-10-12 10:23:23,869 | INFO     | traces error code: 0
[2025-10-12 03:23:24] 2025-10-12 10:23:23,869 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 03:23:24] 2025-10-12 10:23:24,069 [wrapper] ==== pilot stdout END ====
[2025-10-12 03:23:24] 2025-10-12 10:23:24,072 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 03:23:24] 2025-10-12 10:23:24,074 [wrapper] pilotpid: 666584
[2025-10-12 03:23:24] 2025-10-12 10:23:24,078 [wrapper] Pilot exit status: 0
[2025-10-12 03:23:24] 2025-10-12 10:23:24,095 [wrapper] pandaids: 6839659699
[2025-10-12 03:23:24] 2025-10-12 10:23:24,162 [wrapper] cleanup supervisor_pilot  666591 666585
[2025-10-12 03:23:24] 2025-10-12 10:23:24,166 [wrapper] Test setup, not cleaning
[2025-10-12 03:23:24] 2025-10-12 10:23:24,170 [wrapper] apfmon messages muted
[2025-10-12 03:23:24] 2025-10-12 10:23:24,174 [wrapper] ==== wrapper stdout END ====
[2025-10-12 03:23:24] 2025-10-12 10:23:24,181 [wrapper] ==== wrapper stderr END ====
[2025-10-12 03:23:24]  *** Error codes and diagnostics ***
[2025-10-12 03:23:24]     "exeErrorCode": 65,
[2025-10-12 03:23:24]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 03:23:24]     "pilotErrorCode": 1305,
[2025-10-12 03:23:24]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 03:23:24]  *** Listing of results directory ***
[2025-10-12 03:23:24] total 220376
[2025-10-12 03:23:24] -rw-r--r--. 1 boinc boinc    557409 Oct 11 23:54 pilot3.tar.gz
[2025-10-12 03:23:24] -rw-r--r--. 1 boinc boinc      5112 Oct 12 00:41 queuedata.json
[2025-10-12 03:23:24] -rwx------. 1 boinc boinc     36292 Oct 12 00:42 runpilot2-wrapper.sh
[2025-10-12 03:23:24] -rw-r--r--. 1 boinc boinc       100 Oct 12 03:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 03:23:24] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 03:17 run_atlas
[2025-10-12 03:23:24] -rw-r--r--. 1 boinc boinc       105 Oct 12 03:17 job.xml
[2025-10-12 03:23:24] -rw-r--r--. 1 boinc boinc      6593 Oct 12 03:17 init_data.xml
[2025-10-12 03:23:24] -rw-r--r--. 2 boinc boinc 221534161 Oct 12 03:17 EVNT.46676267._003507.pool.root.1
[2025-10-12 03:23:24] -rw-r--r--. 2 boinc boinc     15120 Oct 12 03:17 start_atlas.sh
[2025-10-12 03:23:24] drwxrwx--x. 2 boinc boinc      4096 Oct 12 03:17 shared
[2025-10-12 03:23:24] -rw-r--r--. 2 boinc boinc    569681 Oct 12 03:17 input.tar.gz
[2025-10-12 03:23:24] -rw-r--r--. 1 boinc boinc         0 Oct 12 03:17 boinc_lockfile
[2025-10-12 03:23:24] -rw-r--r--. 1 boinc boinc      2550 Oct 12 03:17 pandaJob.out
[2025-10-12 03:23:24] -rw-------. 1 boinc boinc    975520 Oct 12 03:18 agis_schedconf.cvmfs.json
[2025-10-12 03:23:24] -rw-------. 1 boinc boinc   1560580 Oct 12 03:18 agis_ddmendpoints.agis.ALL.json
[2025-10-12 03:23:24] drwx------. 5 boinc boinc      4096 Oct 12 03:18 pilot3
[2025-10-12 03:23:24] -rw-------. 1 boinc boinc       958 Oct 12 03:19 memory_monitor_summary.json
[2025-10-12 03:23:24] -rw-------. 1 boinc boinc     21840 Oct 12 03:20 log.46676269._073678.job.log.tgz.1
[2025-10-12 03:23:24] -rw-------. 1 boinc boinc        95 Oct 12 03:22 pilot_heartbeat.json
[2025-10-12 03:23:24] -rw-------. 1 boinc boinc      8399 Oct 12 03:22 heartbeat.json
[2025-10-12 03:23:24] -rw-r--r--. 1 boinc boinc       524 Oct 12 03:22 boinc_task_state.xml
[2025-10-12 03:23:24] -rw-r--r--. 1 boinc boinc        22 Oct 12 03:23 wrapper_checkpoint.txt
[2025-10-12 03:23:24] -rw-r--r--. 1 boinc boinc      8192 Oct 12 03:23 boinc_mmap_file
[2025-10-12 03:23:24] -rw-------. 1 boinc boinc      4822 Oct 12 03:23 pilotlog.txt
[2025-10-12 03:23:24] -rw-------. 1 boinc boinc     91475 Oct 12 03:23 log.46676269._073678.job.log.1
[2025-10-12 03:23:24] -rw-------. 1 boinc boinc       188 Oct 12 03:23 output.list
[2025-10-12 03:23:24] -rw-r--r--. 1 boinc boinc       620 Oct 12 03:23 runtime_log
[2025-10-12 03:23:24] -rw-------. 1 boinc boinc    133120 Oct 12 03:23 result.tar.gz
[2025-10-12 03:23:24] -rw-r--r--. 1 boinc boinc      8528 Oct 12 03:23 runtime_log.err
[2025-10-12 03:23:24] -rw-------. 1 boinc boinc       644 Oct 12 03:23 cFYKDmlt5R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmv1iNDmPoNRSn.diag
[2025-10-12 03:23:24] -rw-r--r--. 1 boinc boinc     21719 Oct 12 03:23 stderr.txt
[2025-10-12 03:23:24] No HITS result produced
[2025-10-12 03:23:24]  *** Contents of shared directory: ***
[2025-10-12 03:23:24] total 217052
[2025-10-12 03:23:24] -rw-r--r--. 2 boinc boinc 221534161 Oct 12 03:17 ATLAS.root_0
[2025-10-12 03:23:24] -rw-r--r--. 2 boinc boinc     15120 Oct 12 03:17 start_atlas.sh
[2025-10-12 03:23:24] -rw-r--r--. 2 boinc boinc    569681 Oct 12 03:17 input.tar.gz
[2025-10-12 03:23:24] -rw-------. 1 boinc boinc    133120 Oct 12 03:23 result.tar.gz
03:23:26 (662797): run_atlas exited; CPU time 27.390417
03:23:26 (662797): called boinc_finish(0)

</stderr_txt>
]]>

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