Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:02:10 (2687527): wrapper (7.7.26015): starting
06:02:10 (2687527): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 06:02:10] Arguments: --nthreads 12
[2025-10-12 06:02:10] Threads: 12
[2025-10-12 06:02:10] Checking for CVMFS
[2025-10-12 06:02:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:02:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:02:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:02:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:02:10] 2.13.2.0 3683012 12641 146580 151615 2 195 37129448 40960001 5871 16776704 0 142880216 99.857 55066525 32591 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 06:02:10] CVMFS is ok
[2025-10-12 06:02:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:02:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:02:10] Further information can be found at the LHC@home message board.
[2025-10-12 06:02:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:02:10] Checking for apptainer binary...
[2025-10-12 06:02:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:02:10] Running /usr/bin/apptainer --version
[2025-10-12 06:02:10] apptainer version 1.4.3-1.el9
[2025-10-12 06:02:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:02:10] c8-7-4.aglt2.org
[2025-10-12 06:02:10] apptainer works
[2025-10-12 06:02:10] Set ATHENA_PROC_NUMBER=12
[2025-10-12 06:02:10] Set ATHENA_CORE_NUMBER=12
[2025-10-12 06:02:10] Starting ATLAS job with PandaID=6838852064
[2025-10-12 06:02:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:34:29]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:34:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 06:34:29]  replicas=None
[2025-10-12 06:34:29]  scope=mc23_13p6TeV
[2025-10-12 06:34:29]  status=None
[2025-10-12 06:34:29]  status_code=0
[2025-10-12 06:34:29]  storage_token=
[2025-10-12 06:34:29]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6838852064/log.46676269._064159.job.log.tgz.1
[2025-10-12 06:34:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/5e/log.46676269._064159.job.log.tgz.1
[2025-10-12 06:34:29]  workdir=None
[2025-10-12 06:34:29] ]
[2025-10-12 06:34:29] 2025-10-12 10:33:41,332 | INFO     | transferring file log.46676269._064159.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6838852064/log.46676269._064159.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 06:34:29] 2025-10-12 10:33:41,332 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6838852064/log.46676269._064159.job.log.tgz.1 /tmp/boinchome/slots/3/log.46676269._064159.job
[2025-10-12 06:34:29] 2025-10-12 10:33:41,350 | INFO     | adding to output.list: log.46676269._064159.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/5e/log.46676269._064159.job.log.tg
[2025-10-12 06:34:29] 2025-10-12 10:33:41,350 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 06:34:29] 2025-10-12 10:33:41,350 | INFO     | summary of transferred files:
[2025-10-12 06:34:29] 2025-10-12 10:33:41,350 | INFO     |  -- lfn=log.46676269._064159.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 06:34:29] 2025-10-12 10:33:41,350 | INFO     | stage-out finished correctly
[2025-10-12 06:34:29] 2025-10-12 10:33:41,993 | INFO     | monitor loop #142: job 0:6838852064 is in state 'finished'
[2025-10-12 06:34:29] 2025-10-12 10:33:41,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 06:34:29] 2025-10-12 10:33:42,889 | INFO     | time since job start (1882s) is within the limit (172800.0s)
[2025-10-12 06:34:29] 2025-10-12 10:33:44,496 | INFO     | monitor loop #143: job 0:6838852064 is in state 'finished'
[2025-10-12 06:34:29] 2025-10-12 10:33:44,497 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 06:34:29] 2025-10-12 10:33:44,629 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 06:34:29] 2025-10-12 10:33:44,895 | INFO     | time since job start (1884s) is within the limit (172800.0s)
[2025-10-12 06:34:29] 2025-10-12 10:33:45,101 | INFO     | job 6838852064 has state=finished
[2025-10-12 06:34:29] 2025-10-12 10:33:45,102 | INFO     | preparing for final server update for job 6838852064 in state='finished'
[2025-10-12 06:34:29] 2025-10-12 10:33:45,102 | INFO     | this job has now completed (state=finished)
[2025-10-12 06:34:29] 2025-10-12 10:33:45,102 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 06:34:29] 2025-10-12 10:33:45,102 | INFO     | log transfer has been attempted: DONE
[2025-10-12 06:34:29] 2025-10-12 10:33:45,102 | INFO     | job 6838852064 has finished - writing final server update
[2025-10-12 06:34:29] 2025-10-12 10:33:45,102 | INFO     | total number of processed events: 400 (read)
[2025-10-12 06:34:29] 2025-10-12 10:33:45,103 | INFO     | executing command: lscpu
[2025-10-12 06:34:29] 2025-10-12 10:33:45,166 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 06:34:29] 2025-10-12 10:33:46,900 | INFO     | time since job start (1886s) is within the limit (172800.0s)
[2025-10-12 06:34:29] 2025-10-12 10:33:46,999 | INFO     | monitor loop #144: job 0:6838852064 is in state 'finished'
[2025-10-12 06:34:29] 2025-10-12 10:33:46,999 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 06:34:29] 2025-10-12 10:33:48,192 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 06:34:29] 2025-10-12 10:33:48,196 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3563.8405937499924
[2025-10-12 06:34:29] 2025-10-12 10:33:48,222 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6838852064/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 06:34:29] 2025-10-12 10:33:48,222 | INFO     | extracted standard info from prmon json
[2025-10-12 06:34:29] 2025-10-12 10:33:48,222 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 06:34:29] 2025-10-12 10:33:48,222 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 06:34:29] 2025-10-12 10:33:48,223 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 06:34:29] 2025-10-12 10:33:48,223 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 06:34:29] 2025-10-12 10:33:48,223 | INFO     | fitting pss+swap vs Time
[2025-10-12 06:34:29] 2025-10-12 10:33:48,223 | INFO     | sum of square deviations: 4279150.0
[2025-10-12 06:34:29] 2025-10-12 10:33:48,223 | INFO     | sum of deviations: 91786303.49999999
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | mean x: 1760264369.5
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | mean y: 2353677.2083333335
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | -- intersect: -37754714819.84438
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | intersect: -37754714819.84438
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | chi2: 0.003946180218954557
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | -- intersect: -37754714819.84438
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | current memory leak: 21.45 B/s (using 24 data points, chi2=0.00)
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | could have reported an average CPU frequency of 3589 MHz (5 samples)
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | ..............................
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | . Timing measurements:
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | . get job = 0 s
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | . initial setup = 2 s
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | . payload setup = 4 s
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | . stage-in = 0 s
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | . payload execution = 1857 s
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | . stage-out = 0 s
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | . log creation = 0 s
[2025-10-12 06:34:29] 2025-10-12 10:33:48,224 | INFO     | ..............................
[2025-10-12 06:34:29] 2025-10-12 10:33:48,280 | INFO     | 
[2025-10-12 06:34:29] 2025-10-12 10:33:48,280 | INFO     | job summary report
[2025-10-12 06:34:29] 2025-10-12 10:33:48,280 | INFO     | --------------------------------------------------
[2025-10-12 06:34:29] 2025-10-12 10:33:48,280 | INFO     | PanDA job id: 6838852064
[2025-10-12 06:34:29] 2025-10-12 10:33:48,280 | INFO     | task id: 46676269
[2025-10-12 06:34:29] 2025-10-12 10:33:48,280 | INFO     | errors: (none)
[2025-10-12 06:34:29] 2025-10-12 10:33:48,280 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:34:29] 2025-10-12 10:33:48,280 | INFO     | pilot state: finished 
[2025-10-12 06:34:29] 2025-10-12 10:33:48,280 | INFO     | transexitcode: 0
[2025-10-12 06:34:29] 2025-10-12 10:33:48,280 | INFO     | exeerrorcode: 0
[2025-10-12 06:34:29] 2025-10-12 10:33:48,280 | INFO     | exeerrordiag: 
[2025-10-12 06:34:29] 2025-10-12 10:33:48,280 | INFO     | exitcode: 0
[2025-10-12 06:34:29] 2025-10-12 10:33:48,280 | INFO     | exitmsg: OK
[2025-10-12 06:34:29] 2025-10-12 10:33:48,280 | INFO     | cpuconsumptiontime: 19944 s
[2025-10-12 06:34:29] 2025-10-12 10:33:48,280 | INFO     | nevents: 400
[2025-10-12 06:34:29] 2025-10-12 10:33:48,281 | INFO     | neventsw: 0
[2025-10-12 06:34:29] 2025-10-12 10:33:48,281 | INFO     | pid: 2712093
[2025-10-12 06:34:29] 2025-10-12 10:33:48,281 | INFO     | pgrp: 2712093
[2025-10-12 06:34:29] 2025-10-12 10:33:48,281 | INFO     | corecount: 12
[2025-10-12 06:34:29] 2025-10-12 10:33:48,281 | INFO     | event service: False
[2025-10-12 06:34:29] 2025-10-12 10:33:48,281 | INFO     | sizes: {0: 2348683, 1: 2348882, 4: 2349144, 11: 2349172, 1865: 2374175, 1866: 2383173, 1870: 2383357, 1873: 2383583}
[2025-10-12 06:34:29] 2025-10-12 10:33:48,281 | INFO     | --------------------------------------------------
[2025-10-12 06:34:29] 2025-10-12 10:33:48,281 | INFO     | 
[2025-10-12 06:34:29] 2025-10-12 10:33:48,281 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 06:34:29] 2025-10-12 10:33:48,294 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,294 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,294 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,294 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,294 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,294 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,294 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,294 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,294 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,294 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,294 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,294 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,295 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,295 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,295 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:34:29] 2025-10-12 10:33:48,295 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,295 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:34:29] 2025-10-12 10:33:48,295 | INFO     | job 6838852064 has completed (purged errors)
[2025-10-12 06:34:29] 2025-10-12 10:33:48,295 | INFO     | overall cleanup function is called
[2025-10-12 06:34:29] 2025-10-12 10:33:49,302 | INFO     | --- collectZombieJob: --- 10, [2712093]
[2025-10-12 06:34:29] 2025-10-12 10:33:49,302 | INFO     | zombie collector waiting for pid 2712093
[2025-10-12 06:34:29] 2025-10-12 10:33:49,303 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:34:29] 2025-10-12 10:33:49,303 | INFO     | collected zombie processes
[2025-10-12 06:34:29] 2025-10-12 10:33:49,303 | INFO     | will attempt to kill all subprocesses of pid=2712093
[2025-10-12 06:34:29] 2025-10-12 10:33:49,541 | INFO     | process IDs to be killed: [2712093] (in reverse order)
[2025-10-12 06:34:29] 2025-10-12 10:33:49,625 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:34:29] 2025-10-12 10:33:49,625 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:34:29] 2025-10-12 10:33:49,640 | INFO     | did not find any defunct processes belonging to 2712093
[2025-10-12 06:34:29] 2025-10-12 10:33:49,653 | INFO     | did not find any defunct processes belonging to 2712093
[2025-10-12 06:34:29] 2025-10-12 10:33:49,653 | INFO     | ready for new job
[2025-10-12 06:34:29] 2025-10-12 10:33:49,653 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:34:29] 2025-10-12 10:33:49,654 | INFO     | ***************************************
[2025-10-12 06:34:29] 2025-10-12 10:33:49,654 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:34:29] 2025-10-12 10:33:49,654 | INFO     | ***************************************
[2025-10-12 06:34:29] 2025-10-12 10:33:49,654 | INFO     | 
[2025-10-12 06:34:29] 2025-10-12 10:33:49,671 | INFO     | architecture information:
[2025-10-12 06:34:29] 2025-10-12 10:33:49,671 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:34:29] 2025-10-12 10:33:49,682 | INFO     | cat /etc/os-release:
[2025-10-12 06:34:29] NAME="CentOS Linux"
[2025-10-12 06:34:29] VERSION="7 (Core)"
[2025-10-12 06:34:29] ID="centos"
[2025-10-12 06:34:29] ID_LIKE="rhel fedora"
[2025-10-12 06:34:29] VERSION_ID="7"
[2025-10-12 06:34:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:34:29] ANSI_COLOR="0;31"
[2025-10-12 06:34:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:34:29] HOME_URL="https://www.centos.org/"
[2025-10-12 06:34:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:34:29] 
[2025-10-12 06:34:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:34:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:34:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:34:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:34:29] 
[2025-10-12 06:34:29] 2025-10-12 10:33:49,682 | INFO     | ***************************************
[2025-10-12 06:34:29] 2025-10-12 10:33:50,184 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 06:34:29] 2025-10-12 10:33:50,194 | INFO     | sufficient remaining disk space (167446052864 B)
[2025-10-12 06:34:29] 2025-10-12 10:33:50,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:34:29] 2025-10-12 10:33:50,194 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:34:29] 2025-10-12 10:33:50,194 | INFO     | update_server=False
[2025-10-12 06:34:29] 2025-10-12 10:33:50,194 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:34:29] 2025-10-12 10:33:50,194 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:34:29] 2025-10-12 10:33:50,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:34:29] 2025-10-12 10:33:50,507 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:34:29] 2025-10-12 10:33:50,508 | INFO     | aborting loop
[2025-10-12 06:34:29] 2025-10-12 10:33:50,690 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:34:29] 2025-10-12 10:33:50,948 | INFO     | all data control threads have been joined
[2025-10-12 06:34:29] 2025-10-12 10:33:51,199 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:34:29] 2025-10-12 10:33:51,200 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:34:29] 2025-10-12 10:33:51,387 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:34:29] 2025-10-12 10:33:51,513 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:34:29] 2025-10-12 10:33:51,561 | INFO     | all job control threads have been joined
[2025-10-12 06:34:29] 2025-10-12 10:33:51,562 | INFO     | all payload control threads have been joined
[2025-10-12 06:34:29] 2025-10-12 10:33:51,638 | INFO     | [job] validate thread has finished
[2025-10-12 06:34:29] 2025-10-12 10:33:51,784 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:34:29] 2025-10-12 10:33:51,901 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:34:29] 2025-10-12 10:33:51,954 | INFO     | [data] control thread has finished
[2025-10-12 06:34:29] 2025-10-12 10:33:52,137 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:34:29] 2025-10-12 10:33:52,200 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:34:29] 2025-10-12 10:33:52,260 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:34:29] 2025-10-12 10:33:52,484 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:34:29] 2025-10-12 10:33:52,567 | INFO     | [job] control thread has finished
[2025-10-12 06:34:29] 2025-10-12 10:33:52,568 | INFO     | [payload] control thread has finished
[2025-10-12 06:34:29] 2025-10-12 10:33:52,580 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:34:29] 2025-10-12 10:33:54,696 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:34:29] 2025-10-12 10:34:20,421 | INFO     | PID=2693286 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 06:34:29] 2025-10-12 10:34:20,422 | INFO     | .. there are 10 such processes running
[2025-10-12 06:34:29] 2025-10-12 10:34:20,422 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:34:29] 2025-10-12 10:34:20,422 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:34:29] 2025-10-12 10:34:20,422 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:34:29] 2025-10-12 10:34:22,603 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:34:29] 2025-10-12 10:34:24,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365718959936)>', '<ExcThread(monitor, started 140365084481280)>']
[2025-10-12 06:34:29] 2025-10-12 10:34:25,446 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:34:29] 2025-10-12 10:34:25,446 | INFO     | [monitor] control thread has ended
[2025-10-12 06:34:29] 2025-10-12 10:34:29,641 | INFO     | all workflow threads have been joined
[2025-10-12 06:34:29] 2025-10-12 10:34:29,641 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:34:29] 2025-10-12 10:34:29,642 | INFO     | traces error code: 0
[2025-10-12 06:34:29] 2025-10-12 10:34:29,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:34:29] 2025-10-12 10:34:29,747 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:34:29] 2025-10-12 10:34:29,750 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:34:29] 2025-10-12 10:34:29,752 [wrapper] pilotpid: 2693286
[2025-10-12 06:34:29] 2025-10-12 10:34:29,754 [wrapper] Pilot exit status: 0
[2025-10-12 06:34:29] 2025-10-12 10:34:29,762 [wrapper] pandaids: 6838852064
[2025-10-12 06:34:29] 2025-10-12 10:34:29,847 [wrapper] cleanup supervisor_pilot 2898995 2693287
[2025-10-12 06:34:29] 2025-10-12 10:34:29,849 [wrapper] Test setup, not cleaning
[2025-10-12 06:34:29] 2025-10-12 10:34:29,851 [wrapper] apfmon messages muted
[2025-10-12 06:34:29] 2025-10-12 10:34:29,853 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:34:29] 2025-10-12 10:34:29,856 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:34:29]  *** Error codes and diagnostics ***
[2025-10-12 06:34:29]     "exeErrorCode": 0,
[2025-10-12 06:34:29]     "exeErrorDiag": "",
[2025-10-12 06:34:29]     "pilotErrorCode": 0,
[2025-10-12 06:34:29]     "pilotErrorDiag": "",
[2025-10-12 06:34:29]  *** Listing of results directory ***
[2025-10-12 06:34:29] total 404136
[2025-10-12 06:34:29] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 15:59 pilot3.tar.gz
[2025-10-12 06:34:29] -rwx------. 1 boincer umatlas     36292 Oct 11 16:08 runpilot2-wrapper.sh
[2025-10-12 06:34:29] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 16:08 queuedata.json
[2025-10-12 06:34:29] -rw-r--r--. 1 boincer umatlas       100 Oct 12 06:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:34:29] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 06:02 run_atlas
[2025-10-12 06:34:29] -rw-r--r--. 1 boincer umatlas       105 Oct 12 06:02 job.xml
[2025-10-12 06:34:29] -rw-r--r--. 2 boincer umatlas 220791888 Oct 12 06:02 EVNT.46676267._002579.pool.root.1
[2025-10-12 06:34:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 06:02 start_atlas.sh
[2025-10-12 06:34:29] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 06:02 shared
[2025-10-12 06:34:29] -rw-r--r--. 2 boincer umatlas    569669 Oct 12 06:02 input.tar.gz
[2025-10-12 06:34:29] -rw-r--r--. 1 boincer umatlas         0 Oct 12 06:02 boinc_lockfile
[2025-10-12 06:34:29] -rw-r--r--. 1 boincer umatlas      2548 Oct 12 06:02 pandaJob.out
[2025-10-12 06:34:29] -rw-------. 1 boincer umatlas    975536 Oct 12 06:02 agis_schedconf.cvmfs.json
[2025-10-12 06:34:29] -rw-------. 1 boincer umatlas   1560580 Oct 12 06:02 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:34:29] drwx------. 5 boincer umatlas      4096 Oct 12 06:02 pilot3
[2025-10-12 06:34:29] -rw-r--r--. 1 boincer umatlas      7164 Oct 12 06:28 init_data.xml
[2025-10-12 06:34:29] -rw-------. 1 boincer umatlas 187844589 Oct 12 06:33 HITS.46676269._064159.pool.root.1
[2025-10-12 06:34:29] -rw-r--r--. 1 boincer umatlas       529 Oct 12 06:33 boinc_task_state.xml
[2025-10-12 06:34:29] -rw-------. 1 boincer umatlas      1028 Oct 12 06:33 memory_monitor_summary.json
[2025-10-12 06:34:29] -rw-------. 1 boincer umatlas    330648 Oct 12 06:33 log.46676269._064159.job.log.tgz.1
[2025-10-12 06:34:29] -rw-------. 1 boincer umatlas      7775 Oct 12 06:33 heartbeat.json
[2025-10-12 06:34:29] -rw-------. 1 boincer umatlas        95 Oct 12 06:34 pilot_heartbeat.json
[2025-10-12 06:34:29] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 06:34 boinc_mmap_file
[2025-10-12 06:34:29] -rw-r--r--. 1 boincer umatlas        27 Oct 12 06:34 wrapper_checkpoint.txt
[2025-10-12 06:34:29] -rw-------. 1 boincer umatlas      4825 Oct 12 06:34 pilotlog.txt
[2025-10-12 06:34:29] -rw-------. 1 boincer umatlas    311688 Oct 12 06:34 log.46676269._064159.job.log.1
[2025-10-12 06:34:29] -rw-------. 1 boincer umatlas       357 Oct 12 06:34 output.list
[2025-10-12 06:34:29] -rw-r--r--. 1 boincer umatlas       620 Oct 12 06:34 runtime_log
[2025-10-12 06:34:29] -rw-------. 1 boincer umatlas    665600 Oct 12 06:34 result.tar.gz
[2025-10-12 06:34:29] -rw-r--r--. 1 boincer umatlas      8695 Oct 12 06:34 runtime_log.err
[2025-10-12 06:34:29] -rw-------. 1 boincer umatlas       650 Oct 12 06:34 iCGMDmJ4uR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTVhNDmOsYwRm.diag
[2025-10-12 06:34:29] -rw-r--r--. 1 boincer umatlas     21904 Oct 12 06:34 stderr.txt
[2025-10-12 06:34:29] HITS file was successfully produced:
[2025-10-12 06:34:29] -rw-------. 1 boincer umatlas 187844589 Oct 12 06:33 shared/HITS.pool.root.1
[2025-10-12 06:34:29]  *** Contents of shared directory: ***
[2025-10-12 06:34:29] total 400300
[2025-10-12 06:34:29] -rw-r--r--. 2 boincer umatlas 220791888 Oct 12 06:02 ATLAS.root_0
[2025-10-12 06:34:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 06:02 start_atlas.sh
[2025-10-12 06:34:29] -rw-r--r--. 2 boincer umatlas    569669 Oct 12 06:02 input.tar.gz
[2025-10-12 06:34:29] -rw-------. 1 boincer umatlas 187844589 Oct 12 06:33 HITS.pool.root.1
[2025-10-12 06:34:29] -rw-------. 1 boincer umatlas    665600 Oct 12 06:34 result.tar.gz
06:34:31 (2687527): run_atlas exited; CPU time 19958.462138
06:34:31 (2687527): called boinc_finish(0)

</stderr_txt>
]]>

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