Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:32:22 (1682646): wrapper (7.7.26015): starting
14:32:22 (1682646): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 14:32:22] Arguments: --nthreads 4
[2025-10-12 14:32:22] Threads: 4
[2025-10-12 14:32:22] Checking for CVMFS
[2025-10-12 14:32:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:32:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:32:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:32:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:32:22] 2.9.2.0 4671 3860 97300 151620 1 57 36666909 36864000 0 130560 0 3556139 99.992 134803 818 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 14:32:22] CVMFS is ok
[2025-10-12 14:32:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:32:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:32:22] Further information can be found at the LHC@home message board.
[2025-10-12 14:32:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:32:22] Checking for apptainer binary...
[2025-10-12 14:32:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:32:22] Running /usr/bin/apptainer --version
[2025-10-12 14:32:22] apptainer version 1.4.1-1.1
[2025-10-12 14:32:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:32:22] thA365
[2025-10-12 14:32:22] apptainer works
[2025-10-12 14:32:22] Set ATHENA_PROC_NUMBER=4
[2025-10-12 14:32:22] Set ATHENA_CORE_NUMBER=4
[2025-10-12 14:32:22] Starting ATLAS job with PandaID=6839221566
[2025-10-12 14:32:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:42:41]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:42:41]  scope=mc23_13p6TeV
[2025-10-12 15:42:41]  status=None
[2025-10-12 15:42:41]  status_code=0
[2025-10-12 15:42:41]  storage_token=
[2025-10-12 15:42:41]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6839221566/log.46676269._068578.job.log.tgz.1
[2025-10-12 15:42:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/33/log.46676269._068578.job.log.tgz.1
[2025-10-12 15:42:41]  workdir=None
[2025-10-12 15:42:41] ]
[2025-10-12 15:42:41] 2025-10-12 13:41:41,448 | INFO     | transferring file log.46676269._068578.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6839221566/log.46676269._068578.job.log.tgz.1 to /local/data/boinc/
[2025-10-12 15:42:41] 2025-10-12 13:41:41,448 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6839221566/log.46676269._068578.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0685
[2025-10-12 15:42:41] 2025-10-12 13:41:41,466 | INFO     | adding to output.list: log.46676269._068578.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/33/log.46676269._068578.job.log.tg
[2025-10-12 15:42:41] 2025-10-12 13:41:41,466 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 15:42:41] 2025-10-12 13:41:41,466 | INFO     | summary of transferred files:
[2025-10-12 15:42:41] 2025-10-12 13:41:41,466 | INFO     |  -- lfn=log.46676269._068578.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 15:42:41] 2025-10-12 13:41:41,467 | INFO     | stage-out finished correctly
[2025-10-12 15:42:41] 2025-10-12 13:41:41,847 | INFO     | time since job start (4151s) is within the limit (172800.0s)
[2025-10-12 15:42:41] 2025-10-12 13:41:42,883 | WARNING  | process 1693079 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 15:42:41] 2025-10-12 13:41:42,884 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6839221566/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:42:41] 2025-10-12 13:41:42,932 | INFO     | number of running child processes to parent process 1693079: 1
[2025-10-12 15:42:41] 2025-10-12 13:41:42,932 | INFO     | maximum number of monitored processes: 6
[2025-10-12 15:42:41] 2025-10-12 13:41:43,853 | INFO     | time since job start (4153s) is within the limit (172800.0s)
[2025-10-12 15:42:41] 2025-10-12 13:41:44,325 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 15:42:41] 2025-10-12 13:41:45,435 | INFO     | monitor loop #319: job 0:6839221566 is in state 'finished'
[2025-10-12 15:42:41] 2025-10-12 13:41:45,436 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:42:41] 2025-10-12 13:41:45,859 | INFO     | time since job start (4155s) is within the limit (172800.0s)
[2025-10-12 15:42:41] 2025-10-12 13:41:46,154 | INFO     | job 6839221566 has state=finished
[2025-10-12 15:42:41] 2025-10-12 13:41:46,154 | INFO     | preparing for final server update for job 6839221566 in state='finished'
[2025-10-12 15:42:41] 2025-10-12 13:41:46,154 | INFO     | this job has now completed (state=finished)
[2025-10-12 15:42:41] 2025-10-12 13:41:46,154 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 15:42:41] 2025-10-12 13:41:46,154 | INFO     | log transfer has been attempted: DONE
[2025-10-12 15:42:41] 2025-10-12 13:41:46,154 | INFO     | job 6839221566 has finished - writing final server update
[2025-10-12 15:42:41] 2025-10-12 13:41:46,155 | INFO     | total number of processed events: 400 (read)
[2025-10-12 15:42:41] 2025-10-12 13:41:46,155 | INFO     | executing command: lscpu
[2025-10-12 15:42:41] 2025-10-12 13:41:46,174 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 15:42:41] 2025-10-12 13:41:47,866 | INFO     | time since job start (4157s) is within the limit (172800.0s)
[2025-10-12 15:42:41] 2025-10-12 13:41:47,939 | INFO     | monitor loop #320: job 0:6839221566 is in state 'finished'
[2025-10-12 15:42:41] 2025-10-12 13:41:47,939 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:42:41] 2025-10-12 13:41:49,424 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 15:42:41] 2025-10-12 13:41:49,426 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3272.3281250000005
[2025-10-12 15:42:41] 2025-10-12 13:41:49,427 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6839221566/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:42:41] 2025-10-12 13:41:49,427 | INFO     | extracted standard info from prmon json
[2025-10-12 15:42:41] 2025-10-12 13:41:49,428 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:42:41] 2025-10-12 13:41:49,428 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:42:41] 2025-10-12 13:41:49,428 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:42:41] 2025-10-12 13:41:49,428 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:42:41] 2025-10-12 13:41:49,428 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:42:41] 2025-10-12 13:41:49,428 | INFO     | sum of square deviations: 70364110.0
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | sum of deviations: -9136931664.999998
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | mean x: 1760274508.0
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | mean y: 2564048.180327869
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | -- intersect: 228578010980.39465
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | intersect: 228578010980.39465
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | chi2: 0.0340787017436498
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | -- intersect: 228578010980.39465
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | current memory leak: -129.85 B/s (using 61 data points, chi2=0.03)
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | could have reported an average CPU frequency of 3601 MHz (6 samples)
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | ..............................
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | . Timing measurements:
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | . get job = 0 s
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | . initial setup = 1 s
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | . payload setup = 4 s
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | . stage-in = 0 s
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | . payload execution = 4127 s
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | . stage-out = 0 s
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | . log creation = 0 s
[2025-10-12 15:42:41] 2025-10-12 13:41:49,429 | INFO     | ..............................
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | 
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | job summary report
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | --------------------------------------------------
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | PanDA job id: 6839221566
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | task id: 46676269
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | errors: (none)
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | pilot state: finished 
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | transexitcode: 0
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | exeerrorcode: 0
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | exeerrordiag: 
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | exitcode: 0
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | exitmsg: OK
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | cpuconsumptiontime: 15564 s
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | nevents: 400
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | neventsw: 0
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | pid: 1693079
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | pgrp: 1693079
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | corecount: 4
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | event service: False
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | sizes: {0: 2348683, 1: 2348882, 4: 2349144, 11: 2349172, 4135: 2375205, 4137: 2384209, 4140: 2384393, 4145: 2384587}
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | --------------------------------------------------
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | 
[2025-10-12 15:42:41] 2025-10-12 13:41:49,470 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:42:41] 2025-10-12 13:41:49,488 | INFO     | job 6839221566 has completed (purged errors)
[2025-10-12 15:42:41] 2025-10-12 13:41:49,489 | INFO     | overall cleanup function is called
[2025-10-12 15:42:41] 2025-10-12 13:41:50,495 | INFO     | --- collectZombieJob: --- 10, [1693079]
[2025-10-12 15:42:41] 2025-10-12 13:41:50,495 | INFO     | zombie collector waiting for pid 1693079
[2025-10-12 15:42:41] 2025-10-12 13:41:50,495 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:42:41] 2025-10-12 13:41:50,496 | INFO     | collected zombie processes
[2025-10-12 15:42:41] 2025-10-12 13:41:50,496 | INFO     | will attempt to kill all subprocesses of pid=1693079
[2025-10-12 15:42:41] 2025-10-12 13:41:50,547 | INFO     | process IDs to be killed: [1693079] (in reverse order)
[2025-10-12 15:42:41] 2025-10-12 13:41:50,581 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:42:41] 2025-10-12 13:41:50,582 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:42:41] 2025-10-12 13:41:50,584 | INFO     | did not find any defunct processes belonging to 1693079
[2025-10-12 15:42:41] 2025-10-12 13:41:50,585 | INFO     | did not find any defunct processes belonging to 1693079
[2025-10-12 15:42:41] 2025-10-12 13:41:50,585 | INFO     | ready for new job
[2025-10-12 15:42:41] 2025-10-12 13:41:50,585 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:42:41] 2025-10-12 13:41:50,586 | INFO     | ***************************************
[2025-10-12 15:42:41] 2025-10-12 13:41:50,586 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:42:41] 2025-10-12 13:41:50,586 | INFO     | ***************************************
[2025-10-12 15:42:41] 2025-10-12 13:41:50,586 | INFO     | 
[2025-10-12 15:42:41] 2025-10-12 13:41:50,587 | INFO     | architecture information:
[2025-10-12 15:42:41] 2025-10-12 13:41:50,587 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:42:41] 2025-10-12 13:41:50,600 | INFO     | cat /etc/os-release:
[2025-10-12 15:42:41] NAME="CentOS Linux"
[2025-10-12 15:42:41] VERSION="7 (Core)"
[2025-10-12 15:42:41] ID="centos"
[2025-10-12 15:42:41] ID_LIKE="rhel fedora"
[2025-10-12 15:42:41] VERSION_ID="7"
[2025-10-12 15:42:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:42:41] ANSI_COLOR="0;31"
[2025-10-12 15:42:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:42:41] HOME_URL="https://www.centos.org/"
[2025-10-12 15:42:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:42:41] 
[2025-10-12 15:42:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:42:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:42:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:42:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:42:41] 
[2025-10-12 15:42:41] 2025-10-12 13:41:50,600 | INFO     | ***************************************
[2025-10-12 15:42:41] 2025-10-12 13:41:51,103 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 15:42:41] 2025-10-12 13:41:51,119 | INFO     | sufficient remaining disk space (11752439808 B)
[2025-10-12 15:42:41] 2025-10-12 13:41:51,119 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:42:41] 2025-10-12 13:41:51,119 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:42:41] 2025-10-12 13:41:51,119 | INFO     | update_server=False
[2025-10-12 15:42:41] 2025-10-12 13:41:51,119 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:42:41] 2025-10-12 13:41:51,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:42:41] 2025-10-12 13:41:51,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:42:41] 2025-10-12 13:41:51,334 | INFO     | all payload control threads have been joined
[2025-10-12 15:42:41] 2025-10-12 13:41:51,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:42:41] 2025-10-12 13:41:51,448 | INFO     | aborting loop
[2025-10-12 15:42:41] 2025-10-12 13:41:52,021 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:42:41] 2025-10-12 13:41:52,125 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:42:41] 2025-10-12 13:41:52,125 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:42:41] 2025-10-12 13:41:52,206 | INFO     | all data control threads have been joined
[2025-10-12 15:42:41] 2025-10-12 13:41:52,293 | INFO     | all job control threads have been joined
[2025-10-12 15:42:41] 2025-10-12 13:41:52,339 | INFO     | [payload] control thread has finished
[2025-10-12 15:42:41] 2025-10-12 13:41:52,454 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:42:41] 2025-10-12 13:41:52,538 | INFO     | [job] validate thread has finished
[2025-10-12 15:42:41] 2025-10-12 13:41:52,659 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:42:41] 2025-10-12 13:41:52,664 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:42:41] 2025-10-12 13:41:52,671 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:42:41] 2025-10-12 13:41:52,972 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:42:41] 2025-10-12 13:41:53,149 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:42:41] 2025-10-12 13:41:53,212 | INFO     | [data] control thread has finished
[2025-10-12 15:42:41] 2025-10-12 13:41:53,298 | INFO     | [job] control thread has finished
[2025-10-12 15:42:41] 2025-10-12 13:41:53,481 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:42:41] 2025-10-12 13:41:53,526 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:42:41] 2025-10-12 13:41:54,027 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:42:41] 2025-10-12 13:41:55,126 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:42:41] 2025-10-12 13:42:21,003 | INFO     | PID=1686456 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:42:41] 2025-10-12 13:42:21,004 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:42:41] 2025-10-12 13:42:21,004 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:42:41] 2025-10-12 13:42:21,004 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:42:41] 2025-10-12 13:42:34,875 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:42:41] 2025-10-12 13:42:36,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140692961826624)>', '<ExcThread(monitor, started 140692223407872)>']
[2025-10-12 15:42:41] 2025-10-12 13:42:36,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:42:41] 2025-10-12 13:42:36,083 | INFO     | [monitor] control thread has ended
[2025-10-12 15:42:41] 2025-10-12 13:42:41,087 | INFO     | all workflow threads have been joined
[2025-10-12 15:42:41] 2025-10-12 13:42:41,088 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:42:41] 2025-10-12 13:42:41,088 | INFO     | traces error code: 0
[2025-10-12 15:42:41] 2025-10-12 13:42:41,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:42:41] 2025-10-12 13:42:41,160 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:42:41] 2025-10-12 13:42:41,164 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:42:41] 2025-10-12 13:42:41,168 [wrapper] pilotpid: 1686456
[2025-10-12 15:42:41] 2025-10-12 13:42:41,172 [wrapper] Pilot exit status: 0
[2025-10-12 15:42:41] 2025-10-12 13:42:41,183 [wrapper] pandaids: 6839221566
[2025-10-12 15:42:41] 2025-10-12 13:42:41,206 [wrapper] cleanup supervisor_pilot 1706480 1686457
[2025-10-12 15:42:41] 2025-10-12 13:42:41,210 [wrapper] Test setup, not cleaning
[2025-10-12 15:42:41] 2025-10-12 13:42:41,214 [wrapper] apfmon messages muted
[2025-10-12 15:42:41] 2025-10-12 13:42:41,218 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:42:41] 2025-10-12 13:42:41,222 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:42:41]  *** Error codes and diagnostics ***
[2025-10-12 15:42:41]     "exeErrorCode": 0,
[2025-10-12 15:42:41]     "exeErrorDiag": "",
[2025-10-12 15:42:41]     "pilotErrorCode": 0,
[2025-10-12 15:42:41]     "pilotErrorDiag": "",
[2025-10-12 15:42:41]  *** Listing of results directory ***
[2025-10-12 15:42:41] total 400332
[2025-10-12 15:42:41] -rw-r--r-- 1 boinc boinc    557409 Oct 12 03:26 pilot3.tar.gz
[2025-10-12 15:42:41] -rw-r--r-- 1 boinc boinc      5112 Oct 12 03:30 queuedata.json
[2025-10-12 15:42:41] -rwx------ 1 boinc boinc     36292 Oct 12 03:30 runpilot2-wrapper.sh
[2025-10-12 15:42:41] -rw-r--r-- 1 boinc boinc       100 Oct 12 14:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:42:41] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 14:32 run_atlas
[2025-10-12 15:42:41] -rw-r--r-- 1 boinc boinc       105 Oct 12 14:32 job.xml
[2025-10-12 15:42:41] -rw-r--r-- 2 boinc boinc 219601335 Oct 12 14:32 EVNT.46676267._003152.pool.root.1
[2025-10-12 15:42:41] -rw-r--r-- 2 boinc boinc    569679 Oct 12 14:32 input.tar.gz
[2025-10-12 15:42:41] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:32 start_atlas.sh
[2025-10-12 15:42:41] drwxrwx--x 2 boinc boinc      4096 Oct 12 14:32 shared
[2025-10-12 15:42:41] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:32 boinc_setup_complete
[2025-10-12 15:42:41] -rw-r--r-- 1 boinc boinc      6365 Oct 12 14:32 init_data.xml
[2025-10-12 15:42:41] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:32 boinc_lockfile
[2025-10-12 15:42:41] -rw-r--r-- 1 boinc boinc      2547 Oct 12 14:32 pandaJob.out
[2025-10-12 15:42:41] -rw------- 1 boinc boinc    975512 Oct 12 14:32 agis_schedconf.cvmfs.json
[2025-10-12 15:42:41] -rw------- 1 boinc boinc   1560580 Oct 12 14:32 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:42:41] drwx------ 5 boinc boinc      4096 Oct 12 14:32 pilot3
[2025-10-12 15:42:41] -rw-r--r-- 1 boinc boinc       529 Oct 12 15:41 boinc_task_state.xml
[2025-10-12 15:42:41] -rw------- 1 boinc boinc 184703055 Oct 12 15:41 HITS.46676269._068578.pool.root.1
[2025-10-12 15:42:41] -rw------- 1 boinc boinc      1022 Oct 12 15:41 memory_monitor_summary.json
[2025-10-12 15:42:41] -rw------- 1 boinc boinc    246053 Oct 12 15:41 log.46676269._068578.job.log.tgz.1
[2025-10-12 15:42:41] -rw------- 1 boinc boinc      7763 Oct 12 15:41 heartbeat.json
[2025-10-12 15:42:41] -rw-r--r-- 1 boinc boinc      8192 Oct 12 15:42 boinc_mmap_file
[2025-10-12 15:42:41] -rw-r--r-- 1 boinc boinc        27 Oct 12 15:42 wrapper_checkpoint.txt
[2025-10-12 15:42:41] -rw------- 1 boinc boinc        95 Oct 12 15:42 pilot_heartbeat.json
[2025-10-12 15:42:41] -rw------- 1 boinc boinc      4751 Oct 12 15:42 pilotlog.txt
[2025-10-12 15:42:41] -rw------- 1 boinc boinc    619044 Oct 12 15:42 log.46676269._068578.job.log.1
[2025-10-12 15:42:41] -rw------- 1 boinc boinc       357 Oct 12 15:42 output.list
[2025-10-12 15:42:41] -rw-r--r-- 1 boinc boinc       620 Oct 12 15:42 runtime_log
[2025-10-12 15:42:41] -rw------- 1 boinc boinc    880640 Oct 12 15:42 result.tar.gz
[2025-10-12 15:42:41] -rw-r--r-- 1 boinc boinc      8777 Oct 12 15:42 runtime_log.err
[2025-10-12 15:42:41] -rw------- 1 boinc boinc       658 Oct 12 15:42 NoLKDmG6zR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwCiNDmltrQTo.diag
[2025-10-12 15:42:41] -rw-r--r-- 1 boinc boinc     21972 Oct 12 15:42 stderr.txt
[2025-10-12 15:42:41] HITS file was successfully produced:
[2025-10-12 15:42:41] -rw------- 1 boinc boinc 184703055 Oct 12 15:41 shared/HITS.pool.root.1
[2025-10-12 15:42:41]  *** Contents of shared directory: ***
[2025-10-12 15:42:41] total 396276
[2025-10-12 15:42:41] -rw-r--r-- 2 boinc boinc 219601335 Oct 12 14:32 ATLAS.root_0
[2025-10-12 15:42:41] -rw-r--r-- 2 boinc boinc    569679 Oct 12 14:32 input.tar.gz
[2025-10-12 15:42:41] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:32 start_atlas.sh
[2025-10-12 15:42:41] -rw------- 1 boinc boinc 184703055 Oct 12 15:41 HITS.pool.root.1
[2025-10-12 15:42:41] -rw------- 1 boinc boinc    880640 Oct 12 15:42 result.tar.gz
15:42:42 (1682646): run_atlas exited; CPU time 15579.252473
15:42:42 (1682646): called boinc_finish(0)

</stderr_txt>
]]>

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