Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:07:33 (3231152): wrapper (7.7.26015): starting
03:07:33 (3231152): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 03:07:33] Arguments: --nthreads 12
[2025-10-12 03:07:33] Threads: 12
[2025-10-12 03:07:33] Checking for CVMFS
[2025-10-12 03:07:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 03:07:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 03:07:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 03:07:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 03:07:34] 2.11.5.0 2471 30984 209316 151615 1 548 28962097 45568000 17515 130560 0 306153388 99.856 134376580 25420 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 03:07:34] CVMFS is ok
[2025-10-12 03:07:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 03:07:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 03:07:34] Further information can be found at the LHC@home message board.
[2025-10-12 03:07:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:07:34] Checking for apptainer binary...
[2025-10-12 03:07:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 03:07:34] Running /usr/bin/apptainer --version
[2025-10-12 03:07:34] apptainer version 1.4.1-1.el9
[2025-10-12 03:07:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:07:35] wns0035.triumf.lcg
[2025-10-12 03:07:35] apptainer works
[2025-10-12 03:07:35] Set ATHENA_PROC_NUMBER=12
[2025-10-12 03:07:35] Set ATHENA_CORE_NUMBER=12
[2025-10-12 03:07:35] Starting ATLAS job with PandaID=6839659125
[2025-10-12 03:07:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 03:13:20]  *** The last 200 lines of the pilot log: ***
[2025-10-12 03:13:20] 2025-10-12 10:12:25,247 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 03:13:20] 2025-10-12 10:12:25,248 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:13:20] 2025-10-12 10:12:25,248 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:13:20] 2025-10-12 10:12:25,255 | WARNING  | wrong length of table data, x=[1760263771.0], y=[3083.0] (must be same and length>=4)
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | could have reported an average CPU frequency of 2629 MHz (4 samples)
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | ..............................
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . Timing measurements:
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . get job = 0 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . initial setup = 3 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . payload setup = 21 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . stage-in = 0 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . payload execution = 57 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . stage-out = 0 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . log creation = 0 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | ..............................
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839659125/pilotlog.txt
[2025-10-12 03:13:20] 2025-10-12 10:12:25,285 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 03:13:20] - Log from pilotlog.txt -
[2025-10-12 03:13:20] 2025-10-12 10:12:25,247 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839659125/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 03:13:20] 2025-10-12 10:12:25,247 | INFO     | extracted standard info from prmon json
[2025-10-12 03:13:20] 2025-10-12 10:12:25,247 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 03:13:20] 2025-10-12 10:12:25,247 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 03:13:20] 2025-10-12 10:12:25,248 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:13:20] 2025-10-12 10:12:25,248 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:13:20] 2025-10-12 10:12:25,255 | WARNING  | wrong length of table data, x=[1760263771.0], y=[3083.0] (must be same and length>=4)
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | could have reported an average CPU frequency of 2629 MHz (4 samples)
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | ..............................
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . Timing measurements:
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . get job = 0 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . initial setup = 3 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . payload setup = 21 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . stage-in = 0 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . payload execution = 57 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . stage-out = 0 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . log creation = 0 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | ..............................
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839659125/pilotlog.txt
[2025-10-12 03:13:20] 2025-10-12 10:12:25,286 | WARNING  | 
[2025-10-12 03:13:20] [begin log extracts]
[2025-10-12 03:13:20] - Log from pilotlog.txt -
[2025-10-12 03:13:20] 2025-10-12 10:12:25,247 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839659125/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 03:13:20] 2025-10-12 10:12:25,247 | INFO     | extracted standard info from prmon json
[2025-10-12 03:13:20] 2025-10-12 10:12:25,247 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 03:13:20] 2025-10-12 10:12:25,247 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 03:13:20] 2025-10-12 10:12:25,248 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:13:20] 2025-10-12 10:12:25,248 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:13:20] 2025-10-12 10:12:25,255 | WARNING  | wrong length of table data, x=[1760263771.0], y=[3083.0] (must be same and length>=4)
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | could have reported an average CPU frequency of 2629 MHz (4 samples)
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | ..............................
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . Timing measurements:
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . get job = 0 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . initial setup = 3 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . payload setup = 21 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . stage-in = 0 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . payload execution = 57 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . stage-out = 0 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | . log creation = 0 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | ..............................
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 03:13:20] 2025-10-12 10:12:25,256 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839659125/pilotlog.txt
[2025-10-12 03:13:20] [end log extracts]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,286 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 03:13:20] 2025-10-12 10:12:25,287 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 03:13:20] 2025-10-12 10:12:25,346 | INFO     | 
[2025-10-12 03:13:20] 2025-10-12 10:12:25,346 | INFO     | job summary report
[2025-10-12 03:13:20] 2025-10-12 10:12:25,346 | INFO     | --------------------------------------------------
[2025-10-12 03:13:20] 2025-10-12 10:12:25,346 | INFO     | PanDA job id: 6839659125
[2025-10-12 03:13:20] 2025-10-12 10:12:25,346 | INFO     | task id: 46676269
[2025-10-12 03:13:20] 2025-10-12 10:12:25,346 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 03:10:01,683 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | pilot state: failed 
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | transexitcode: 65
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | exeerrorcode: 65
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | exitcode: 65
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | cpuconsumptiontime: 18 s
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | nevents: 0
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | neventsw: 0
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | pid: 3248747
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | pgrp: 3248747
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | corecount: 12
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | event service: False
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | sizes: {0: 2348627, 1: 2348882, 2: 2348882, 12: 2348910, 18: 2349200, 23: 2349228, 82: 2372590, 83: 2376938, 215: 2377076}
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | --------------------------------------------------
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | 
[2025-10-12 03:13:20] 2025-10-12 10:12:25,347 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 03:13:20] 2025-10-12 10:12:25,362 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,362 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,362 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,362 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,362 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | job 6839659125 has completed (purged errors)
[2025-10-12 03:13:20] 2025-10-12 10:12:25,363 | INFO     | overall cleanup function is called
[2025-10-12 03:13:20] 2025-10-12 10:12:26,377 | INFO     | --- collectZombieJob: --- 10, [3248747]
[2025-10-12 03:13:20] 2025-10-12 10:12:26,377 | INFO     | zombie collector waiting for pid 3248747
[2025-10-12 03:13:20] 2025-10-12 10:12:26,378 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 03:13:20] 2025-10-12 10:12:26,378 | INFO     | collected zombie processes
[2025-10-12 03:13:20] 2025-10-12 10:12:26,378 | INFO     | will attempt to kill all subprocesses of pid=3248747
[2025-10-12 03:13:20] 2025-10-12 10:12:26,619 | INFO     | process IDs to be killed: [3248747] (in reverse order)
[2025-10-12 03:13:20] 2025-10-12 10:12:26,693 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 03:13:20] 2025-10-12 10:12:26,693 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 03:13:20] 2025-10-12 10:12:26,702 | INFO     | did not find any defunct processes belonging to 3248747
[2025-10-12 03:13:20] 2025-10-12 10:12:26,711 | INFO     | did not find any defunct processes belonging to 3248747
[2025-10-12 03:13:20] 2025-10-12 10:12:26,711 | INFO     | ready for new job
[2025-10-12 03:13:20] 2025-10-12 10:12:26,711 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 03:13:20] 2025-10-12 10:12:26,714 | INFO     | ***************************************
[2025-10-12 03:13:20] 2025-10-12 10:12:26,714 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 03:13:20] 2025-10-12 10:12:26,714 | INFO     | ***************************************
[2025-10-12 03:13:20] 2025-10-12 10:12:26,714 | INFO     | 
[2025-10-12 03:13:20] 2025-10-12 10:12:26,716 | INFO     | architecture information:
[2025-10-12 03:13:20] 2025-10-12 10:12:26,716 | INFO     | executing command: cat /etc/os-release
[2025-10-12 03:13:20] 2025-10-12 10:12:26,731 | INFO     | cat /etc/os-release:
[2025-10-12 03:13:20] NAME="CentOS Linux"
[2025-10-12 03:13:20] VERSION="7 (Core)"
[2025-10-12 03:13:20] ID="centos"
[2025-10-12 03:13:20] ID_LIKE="rhel fedora"
[2025-10-12 03:13:20] VERSION_ID="7"
[2025-10-12 03:13:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 03:13:20] ANSI_COLOR="0;31"
[2025-10-12 03:13:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 03:13:20] HOME_URL="https://www.centos.org/"
[2025-10-12 03:13:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 03:13:20] 
[2025-10-12 03:13:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 03:13:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 03:13:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 03:13:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 03:13:20] 
[2025-10-12 03:13:20] 2025-10-12 10:12:26,731 | INFO     | ***************************************
[2025-10-12 03:13:20] 2025-10-12 10:12:27,242 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 03:13:20] 2025-10-12 10:12:27,286 | INFO     | sufficient remaining disk space (1862911655936 B)
[2025-10-12 03:13:20] 2025-10-12 10:12:27,286 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 03:13:20] 2025-10-12 10:12:27,286 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 03:13:20] 2025-10-12 10:12:27,286 | INFO     | update_server=False
[2025-10-12 03:13:20] 2025-10-12 10:12:27,286 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 03:13:20] 2025-10-12 10:12:27,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 03:13:20] 2025-10-12 10:12:27,288 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:13:20] 2025-10-12 10:12:27,300 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:13:20] 2025-10-12 10:12:27,300 | INFO     | aborting loop
[2025-10-12 03:13:20] 2025-10-12 10:12:28,120 | INFO     | all job control threads have been joined
[2025-10-12 03:13:20] 2025-10-12 10:12:28,235 | INFO     | all payload control threads have been joined
[2025-10-12 03:13:20] 2025-10-12 10:12:28,292 | INFO     | [job] retrieve thread has finished
[2025-10-12 03:13:20] 2025-10-12 10:12:28,293 | INFO     | [job] queue monitor thread has finished
[2025-10-12 03:13:20] 2025-10-12 10:12:28,306 | INFO     | [job] job monitor thread has finished
[2025-10-12 03:13:20] 2025-10-12 10:12:28,382 | INFO     | all data control threads have been joined
[2025-10-12 03:13:20] 2025-10-12 10:12:28,554 | INFO     | [payload] failed_post thread has finished
[2025-10-12 03:13:20] 2025-10-12 10:12:28,831 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 03:13:20] 2025-10-12 10:12:28,867 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 03:13:20] 2025-10-12 10:12:28,937 | INFO     | [data] copytool_in thread has finished
[2025-10-12 03:13:20] 2025-10-12 10:12:28,951 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 03:13:20] 2025-10-12 10:12:29,126 | INFO     | [job] control thread has finished
[2025-10-12 03:13:20] 2025-10-12 10:12:29,241 | INFO     | [payload] control thread has finished
[2025-10-12 03:13:20] 2025-10-12 10:12:29,245 | INFO     | [payload] validate_post thread has finished
[2025-10-12 03:13:20] 2025-10-12 10:12:29,286 | INFO     | [job] validate thread has finished
[2025-10-12 03:13:20] 2025-10-12 10:12:29,294 | INFO     | [data] copytool_out thread has finished
[2025-10-12 03:13:20] 2025-10-12 10:12:29,361 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 03:13:20] 2025-10-12 10:12:29,388 | INFO     | [data] control thread has finished
[2025-10-12 03:13:20] 2025-10-12 10:12:29,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 03:13:20] 2025-10-12 10:12:33,870 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 03:13:20] 2025-10-12 10:12:59,006 | INFO     | PID=3236557 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 03:13:20] 2025-10-12 10:12:59,006 | INFO     | .. there are 35 such processes running
[2025-10-12 03:13:20] 2025-10-12 10:12:59,006 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 03:13:20] 2025-10-12 10:12:59,006 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 03:13:20] 2025-10-12 10:12:59,006 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 03:13:20] 2025-10-12 10:13:12,776 | INFO     | [monitor] cgroup control has ended
[2025-10-12 03:13:20] 2025-10-12 10:13:13,671 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139736423900992)>', '<ExcThread(monitor, started 139735754340096)>']
[2025-10-12 03:13:20] 2025-10-12 10:13:14,096 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 03:13:20] 2025-10-12 10:13:14,096 | INFO     | [monitor] control thread has ended
[2025-10-12 03:13:20] 2025-10-12 10:13:18,697 | INFO     | all workflow threads have been joined
[2025-10-12 03:13:20] 2025-10-12 10:13:18,697 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 03:13:20] 2025-10-12 10:13:18,698 | INFO     | traces error code: 0
[2025-10-12 03:13:20] 2025-10-12 10:13:18,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 03:13:20] 2025-10-12 10:13:19,235 [wrapper] ==== pilot stdout END ====
[2025-10-12 03:13:20] 2025-10-12 10:13:19,259 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 03:13:20] 2025-10-12 10:13:19,271 [wrapper] pilotpid: 3236557
[2025-10-12 03:13:20] 2025-10-12 10:13:19,277 [wrapper] Pilot exit status: 0
[2025-10-12 03:13:20] 2025-10-12 10:13:19,322 [wrapper] pandaids: 6839659125
[2025-10-12 03:13:20] 2025-10-12 10:13:19,898 [wrapper] cleanup supervisor_pilot 3236565 3236558
[2025-10-12 03:13:20] 2025-10-12 10:13:19,924 [wrapper] Test setup, not cleaning
[2025-10-12 03:13:20] 2025-10-12 10:13:19,934 [wrapper] apfmon messages muted
[2025-10-12 03:13:20] 2025-10-12 10:13:19,944 [wrapper] ==== wrapper stdout END ====
[2025-10-12 03:13:20] 2025-10-12 10:13:19,977 [wrapper] ==== wrapper stderr END ====
[2025-10-12 03:13:20]  *** Error codes and diagnostics ***
[2025-10-12 03:13:20]     "exeErrorCode": 65,
[2025-10-12 03:13:20]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 03:13:20]     "pilotErrorCode": 1305,
[2025-10-12 03:13:20]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 03:13:20]  *** Listing of results directory ***
[2025-10-12 03:13:20] total 218052
[2025-10-12 03:13:20] -rw-r--r--. 1 boinc boinc    557409 Oct 11 23:54 pilot3.tar.gz
[2025-10-12 03:13:20] -rwx------. 1 boinc boinc     36292 Oct 12 00:32 runpilot2-wrapper.sh
[2025-10-12 03:13:20] -rw-r--r--. 1 boinc boinc      5112 Oct 12 00:32 queuedata.json
[2025-10-12 03:13:20] -rw-r--r--. 1 boinc boinc       100 Oct 12 03:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 03:13:20] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 03:07 run_atlas
[2025-10-12 03:13:20] -rw-r--r--. 1 boinc boinc       105 Oct 12 03:07 job.xml
[2025-10-12 03:13:20] -rw-r--r--. 2 boinc boinc 219151103 Oct 12 03:07 EVNT.46676267._003504.pool.root.1
[2025-10-12 03:13:20] -rw-r--r--. 2 boinc boinc    569677 Oct 12 03:07 input.tar.gz
[2025-10-12 03:13:20] -rw-r--r--. 1 boinc boinc      6594 Oct 12 03:07 init_data.xml
[2025-10-12 03:13:20] -rw-r--r--. 2 boinc boinc     15120 Oct 12 03:07 start_atlas.sh
[2025-10-12 03:13:20] drwxrwx--x. 2 boinc boinc      4096 Oct 12 03:07 shared
[2025-10-12 03:13:20] -rw-r--r--. 1 boinc boinc         0 Oct 12 03:07 boinc_lockfile
[2025-10-12 03:13:20] -rw-r--r--. 1 boinc boinc      2550 Oct 12 03:07 pandaJob.out
[2025-10-12 03:13:20] -rw-------. 1 boinc boinc    975536 Oct 12 03:08 agis_schedconf.cvmfs.json
[2025-10-12 03:13:20] -rw-------. 1 boinc boinc   1560580 Oct 12 03:08 agis_ddmendpoints.agis.ALL.json
[2025-10-12 03:13:20] drwx------. 5 boinc boinc      4096 Oct 12 03:08 pilot3
[2025-10-12 03:13:20] -rw-r--r--. 1 boinc boinc       524 Oct 12 03:09 boinc_task_state.xml
[2025-10-12 03:13:20] -rw-------. 1 boinc boinc       989 Oct 12 03:10 memory_monitor_summary.json
[2025-10-12 03:13:20] -rw-------. 1 boinc boinc     21935 Oct 12 03:10 log.46676269._073606.job.log.tgz.1
[2025-10-12 03:13:20] -rw-------. 1 boinc boinc        95 Oct 12 03:12 pilot_heartbeat.json
[2025-10-12 03:13:20] -rw-------. 1 boinc boinc      8405 Oct 12 03:12 heartbeat.json
[2025-10-12 03:13:20] -rw-------. 1 boinc boinc      4823 Oct 12 03:13 pilotlog.txt
[2025-10-12 03:13:20] -rw-r--r--. 1 boinc boinc      8192 Oct 12 03:13 boinc_mmap_file
[2025-10-12 03:13:20] -rw-------. 1 boinc boinc     92553 Oct 12 03:13 log.46676269._073606.job.log.1
[2025-10-12 03:13:20] -rw-r--r--. 1 boinc boinc        22 Oct 12 03:13 wrapper_checkpoint.txt
[2025-10-12 03:13:20] -rw-------. 1 boinc boinc       188 Oct 12 03:13 output.list
[2025-10-12 03:13:20] -rw-r--r--. 1 boinc boinc       620 Oct 12 03:13 runtime_log
[2025-10-12 03:13:20] -rw-------. 1 boinc boinc    133120 Oct 12 03:13 result.tar.gz
[2025-10-12 03:13:20] -rw-r--r--. 1 boinc boinc      8528 Oct 12 03:13 runtime_log.err
[2025-10-12 03:13:20] -rw-------. 1 boinc boinc       647 Oct 12 03:13 dgJMDmIk5R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmrRTMDmRxpvHn.diag
[2025-10-12 03:13:20] -rw-r--r--. 1 boinc boinc     21802 Oct 12 03:13 stderr.txt
[2025-10-12 03:13:20] No HITS result produced
[2025-10-12 03:13:20]  *** Contents of shared directory: ***
[2025-10-12 03:13:20] total 214728
[2025-10-12 03:13:20] -rw-r--r--. 2 boinc boinc 219151103 Oct 12 03:07 ATLAS.root_0
[2025-10-12 03:13:20] -rw-r--r--. 2 boinc boinc    569677 Oct 12 03:07 input.tar.gz
[2025-10-12 03:13:20] -rw-r--r--. 2 boinc boinc     15120 Oct 12 03:07 start_atlas.sh
[2025-10-12 03:13:20] -rw-------. 1 boinc boinc    133120 Oct 12 03:13 result.tar.gz
03:13:22 (3231152): run_atlas exited; CPU time 28.204869
03:13:22 (3231152): called boinc_finish(0)

</stderr_txt>
]]>

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