Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:44:32 (24162): wrapper (7.7.26015): starting
05:44:32 (24162): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 05:44:32] Arguments: --nthreads 8
[2025-10-12 05:44:32] Threads: 8
[2025-10-12 05:44:32] Checking for CVMFS
[2025-10-12 05:44:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:44:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:44:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:44:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:44:33] 2.11.2.0 2800 222718 119644 151615 2 57 13943077 20275200 1 130560 1 78883187 99.974 14667114 12653 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 05:44:33] CVMFS is ok
[2025-10-12 05:44:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:44:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:44:33] Further information can be found at the LHC@home message board.
[2025-10-12 05:44:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:44:33] Checking for apptainer binary...
[2025-10-12 05:44:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:44:33] Running /usr/bin/apptainer --version
[2025-10-12 05:44:33] apptainer version 1.3.2-1.el7
[2025-10-12 05:44:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:44:34] c-204-36.aglt2.org
[2025-10-12 05:44:34] apptainer works
[2025-10-12 05:44:34] Set ATHENA_PROC_NUMBER=8
[2025-10-12 05:44:34] Set ATHENA_CORE_NUMBER=8
[2025-10-12 05:44:34] Starting ATLAS job with PandaID=6839221389
[2025-10-12 05:44:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:58:10]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:58:10] 2025-10-12 11:57:02,468 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 07:58:10] 2025-10-12 11:57:02,468 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 07:58:10] 2025-10-12 11:57:02,468 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 07:58:10] 2025-10-12 11:57:02,471 | INFO     | fitting pss+swap vs Time
[2025-10-12 07:58:10] 2025-10-12 11:57:02,472 | INFO     | sum of square deviations: 681212772.5
[2025-10-12 07:58:10] 2025-10-12 11:57:02,473 | INFO     | sum of deviations: 747009538.000001
[2025-10-12 07:58:10] 2025-10-12 11:57:02,473 | INFO     | mean x: 1760266256.5
[2025-10-12 07:58:10] 2025-10-12 11:57:02,473 | INFO     | mean y: 2468018.6615384617
[2025-10-12 07:58:10] 2025-10-12 11:57:02,473 | INFO     | -- intersect: -1927818282.635104
[2025-10-12 07:58:10] 2025-10-12 11:57:02,473 | INFO     | intersect: -1927818282.635104
[2025-10-12 07:58:10] 2025-10-12 11:57:02,474 | INFO     | chi2: 2.2138488875896294
[2025-10-12 07:58:10] 2025-10-12 11:57:02,474 | INFO     | sum of square deviations: 605592750.0
[2025-10-12 07:58:10] 2025-10-12 11:57:02,475 | INFO     | sum of deviations: 9085934994.0
[2025-10-12 07:58:10] 2025-10-12 11:57:02,475 | INFO     | mean x: 1760266104.0
[2025-10-12 07:58:10] 2025-10-12 11:57:02,475 | INFO     | mean y: 2484297.544
[2025-10-12 07:58:10] 2025-10-12 11:57:02,475 | INFO     | -- intersect: -26407447778.237362
[2025-10-12 07:58:10] 2025-10-12 11:57:02,475 | INFO     | intersect: -26407447778.237362
[2025-10-12 07:58:10] 2025-10-12 11:57:02,476 | INFO     | chi2: 1.446278661846525
[2025-10-12 07:58:10] 2025-10-12 11:57:02,476 | INFO     | current chi2=1.446278661846525 (change=34.67130164330282 %)
[2025-10-12 07:58:10] 2025-10-12 11:57:02,476 | INFO     | sum of square deviations: 535786790.0
[2025-10-12 07:58:10] 2025-10-12 11:57:02,477 | INFO     | sum of deviations: 8695229078.999998
[2025-10-12 07:58:10] 2025-10-12 11:57:02,477 | INFO     | mean x: 1760265951.5
[2025-10-12 07:58:10] 2025-10-12 11:57:02,477 | INFO     | mean y: 2483443.55
[2025-10-12 07:58:10] 2025-10-12 11:57:02,477 | INFO     | -- intersect: -28564692854.79883
[2025-10-12 07:58:10] 2025-10-12 11:57:02,477 | INFO     | intersect: -28564692854.79883
[2025-10-12 07:58:10] 2025-10-12 11:57:02,478 | INFO     | chi2: 1.448477993186199
[2025-10-12 07:58:10] 2025-10-12 11:57:02,478 | INFO     | current chi2=1.448477993186199 (change=-0.15206829760358928 %)
[2025-10-12 07:58:10] 2025-10-12 11:57:02,478 | INFO     | right removable region: 119
[2025-10-12 07:58:10] 2025-10-12 11:57:02,478 | INFO     | sum of square deviations: 605592750.0
[2025-10-12 07:58:10] 2025-10-12 11:57:02,479 | INFO     | sum of deviations: -16858114695.999996
[2025-10-12 07:58:10] 2025-10-12 11:57:02,479 | INFO     | mean x: 1760266409.0
[2025-10-12 07:58:10] 2025-10-12 11:57:02,479 | INFO     | mean y: 2502834.504
[2025-10-12 07:58:10] 2025-10-12 11:57:02,479 | INFO     | -- intersect: 49003705405.76668
[2025-10-12 07:58:10] 2025-10-12 11:57:02,479 | INFO     | intersect: 49003705405.76668
[2025-10-12 07:58:10] 2025-10-12 11:57:02,479 | INFO     | chi2: 0.8903106857969432
[2025-10-12 07:58:10] 2025-10-12 11:57:02,480 | INFO     | current chi2=0.8903106857969432 (change=59.78448706287781 %)
[2025-10-12 07:58:10] 2025-10-12 11:57:02,480 | INFO     | sum of square deviations: 535786790.0
[2025-10-12 07:58:10] 2025-10-12 11:57:02,480 | INFO     | sum of deviations: -13156832397.0
[2025-10-12 07:58:10] 2025-10-12 11:57:02,480 | INFO     | mean x: 1760266561.5
[2025-10-12 07:58:10] 2025-10-12 11:57:02,481 | INFO     | mean y: 2494704.0833333335
[2025-10-12 07:58:10] 2025-10-12 11:57:02,481 | INFO     | -- intersect: 43227771168.43773
[2025-10-12 07:58:10] 2025-10-12 11:57:02,481 | INFO     | intersect: 43227771168.43773
[2025-10-12 07:58:10] 2025-10-12 11:57:02,481 | INFO     | chi2: 0.8761866364141243
[2025-10-12 07:58:10] 2025-10-12 11:57:02,481 | INFO     | current chi2=0.8761866364141243 (change=1.5864180457607346 %)
[2025-10-12 07:58:10] 2025-10-12 11:57:02,482 | INFO     | left removable region: 20
[2025-10-12 07:58:10] 2025-10-12 11:57:02,482 | INFO     | sum of square deviations: 300842850.0
[2025-10-12 07:58:10] 2025-10-12 11:57:02,482 | INFO     | sum of deviations: 1569813528.0
[2025-10-12 07:58:10] 2025-10-12 11:57:02,482 | INFO     | mean x: 1760266531.0
[2025-10-12 07:58:10] 2025-10-12 11:57:02,482 | INFO     | mean y: 2495205.707070707
[2025-10-12 07:58:10] 2025-10-12 11:57:02,483 | INFO     | -- intersect: -9182666460.090973
[2025-10-12 07:58:10] 2025-10-12 11:57:02,483 | INFO     | intersect: -9182666460.090973
[2025-10-12 07:58:10] 2025-10-12 11:57:02,483 | INFO     | chi2: 0.0002878160753995038
[2025-10-12 07:58:10] 2025-10-12 11:57:02,483 | INFO     | -- intersect: -9182666460.090973
[2025-10-12 07:58:10] 2025-10-12 11:57:02,483 | INFO     | current memory leak: 5.22 B/s (using 99 data points, chi2=0.00)
[2025-10-12 07:58:10] 2025-10-12 11:57:02,484 | INFO     | could have reported an average CPU frequency of 1989 MHz (8 samples)
[2025-10-12 07:58:10] 2025-10-12 11:57:02,484 | INFO     | ..............................
[2025-10-12 07:58:10] 2025-10-12 11:57:02,484 | INFO     | . Timing measurements:
[2025-10-12 07:58:10] 2025-10-12 11:57:02,484 | INFO     | . get job = 0 s
[2025-10-12 07:58:10] 2025-10-12 11:57:02,484 | INFO     | . initial setup = 2 s
[2025-10-12 07:58:10] 2025-10-12 11:57:02,484 | INFO     | . payload setup = 8 s
[2025-10-12 07:58:10] 2025-10-12 11:57:02,484 | INFO     | . stage-in = 0 s
[2025-10-12 07:58:10] 2025-10-12 11:57:02,484 | INFO     | . payload execution = 7892 s
[2025-10-12 07:58:10] 2025-10-12 11:57:02,485 | INFO     | . stage-out = 0 s
[2025-10-12 07:58:10] 2025-10-12 11:57:02,485 | INFO     | . log creation = 0 s
[2025-10-12 07:58:10] 2025-10-12 11:57:02,485 | INFO     | ..............................
[2025-10-12 07:58:10] 2025-10-12 11:57:02,576 | INFO     | 
[2025-10-12 07:58:10] 2025-10-12 11:57:02,576 | INFO     | job summary report
[2025-10-12 07:58:10] 2025-10-12 11:57:02,576 | INFO     | --------------------------------------------------
[2025-10-12 07:58:10] 2025-10-12 11:57:02,576 | INFO     | PanDA job id: 6839221389
[2025-10-12 07:58:10] 2025-10-12 11:57:02,576 | INFO     | task id: 46676269
[2025-10-12 07:58:10] 2025-10-12 11:57:02,577 | INFO     | errors: (none)
[2025-10-12 07:58:10] 2025-10-12 11:57:02,577 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:58:10] 2025-10-12 11:57:02,577 | INFO     | pilot state: finished 
[2025-10-12 07:58:10] 2025-10-12 11:57:02,577 | INFO     | transexitcode: 0
[2025-10-12 07:58:10] 2025-10-12 11:57:02,577 | INFO     | exeerrorcode: 0
[2025-10-12 07:58:10] 2025-10-12 11:57:02,577 | INFO     | exeerrordiag: 
[2025-10-12 07:58:10] 2025-10-12 11:57:02,577 | INFO     | exitcode: 0
[2025-10-12 07:58:10] 2025-10-12 11:57:02,578 | INFO     | exitmsg: OK
[2025-10-12 07:58:10] 2025-10-12 11:57:02,578 | INFO     | cpuconsumptiontime: 55473 s
[2025-10-12 07:58:10] 2025-10-12 11:57:02,578 | INFO     | nevents: 400
[2025-10-12 07:58:10] 2025-10-12 11:57:02,578 | INFO     | neventsw: 0
[2025-10-12 07:58:10] 2025-10-12 11:57:02,578 | INFO     | pid: 2668
[2025-10-12 07:58:10] 2025-10-12 11:57:02,578 | INFO     | pgrp: 2668
[2025-10-12 07:58:10] 2025-10-12 11:57:02,579 | INFO     | corecount: 8
[2025-10-12 07:58:10] 2025-10-12 11:57:02,579 | INFO     | event service: False
[2025-10-12 07:58:10] 2025-10-12 11:57:02,579 | INFO     | sizes: {0: 2348857, 1: 2348885, 6: 2349147, 11: 2349175, 7904: 2376888, 7905: 2385886, 7907: 2386070, 7914: 2386264}
[2025-10-12 07:58:10] 2025-10-12 11:57:02,579 | INFO     | --------------------------------------------------
[2025-10-12 07:58:10] 2025-10-12 11:57:02,579 | INFO     | 
[2025-10-12 07:58:10] 2025-10-12 11:57:02,580 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 07:58:10] 2025-10-12 11:57:02,604 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,604 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,604 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,605 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,605 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,605 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,605 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,605 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,607 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,607 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,607 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:58:10] 2025-10-12 11:57:02,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,608 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:58:10] 2025-10-12 11:57:02,608 | INFO     | job 6839221389 has completed (purged errors)
[2025-10-12 07:58:10] 2025-10-12 11:57:02,608 | INFO     | overall cleanup function is called
[2025-10-12 07:58:10] 2025-10-12 11:57:03,616 | INFO     | --- collectZombieJob: --- 10, [2668]
[2025-10-12 07:58:10] 2025-10-12 11:57:03,616 | INFO     | zombie collector waiting for pid 2668
[2025-10-12 07:58:10] 2025-10-12 11:57:03,617 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:58:10] 2025-10-12 11:57:03,617 | INFO     | collected zombie processes
[2025-10-12 07:58:10] 2025-10-12 11:57:03,617 | INFO     | will attempt to kill all subprocesses of pid=2668
[2025-10-12 07:58:10] 2025-10-12 11:57:03,714 | INFO     | process IDs to be killed: [2668] (in reverse order)
[2025-10-12 07:58:10] 2025-10-12 11:57:03,770 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:58:10] 2025-10-12 11:57:03,770 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:58:10] 2025-10-12 11:57:03,775 | INFO     | did not find any defunct processes belonging to 2668
[2025-10-12 07:58:10] 2025-10-12 11:57:03,779 | INFO     | did not find any defunct processes belonging to 2668
[2025-10-12 07:58:10] 2025-10-12 11:57:03,779 | INFO     | ready for new job
[2025-10-12 07:58:10] 2025-10-12 11:57:03,779 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:58:10] 2025-10-12 11:57:03,781 | INFO     | ***************************************
[2025-10-12 07:58:10] 2025-10-12 11:57:03,781 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:58:10] 2025-10-12 11:57:03,781 | INFO     | ***************************************
[2025-10-12 07:58:10] 2025-10-12 11:57:03,781 | INFO     | 
[2025-10-12 07:58:10] 2025-10-12 11:57:03,782 | INFO     | architecture information:
[2025-10-12 07:58:10] 2025-10-12 11:57:03,782 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:58:10] 2025-10-12 11:57:03,799 | INFO     | cat /etc/os-release:
[2025-10-12 07:58:10] NAME="CentOS Linux"
[2025-10-12 07:58:10] VERSION="7 (Core)"
[2025-10-12 07:58:10] ID="centos"
[2025-10-12 07:58:10] ID_LIKE="rhel fedora"
[2025-10-12 07:58:10] VERSION_ID="7"
[2025-10-12 07:58:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:58:10] ANSI_COLOR="0;31"
[2025-10-12 07:58:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:58:10] HOME_URL="https://www.centos.org/"
[2025-10-12 07:58:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:58:10] 
[2025-10-12 07:58:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:58:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:58:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:58:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:58:10] 
[2025-10-12 07:58:10] 2025-10-12 11:57:03,799 | INFO     | ***************************************
[2025-10-12 07:58:10] 2025-10-12 11:57:04,300 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 07:58:10] 2025-10-12 11:57:04,320 | INFO     | sufficient remaining disk space (18568183808 B)
[2025-10-12 07:58:10] 2025-10-12 11:57:04,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:58:10] 2025-10-12 11:57:04,321 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:58:10] 2025-10-12 11:57:04,321 | INFO     | update_server=False
[2025-10-12 07:58:10] 2025-10-12 11:57:04,321 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:58:10] 2025-10-12 11:57:04,322 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:58:10] 2025-10-12 11:57:04,817 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:58:10] 2025-10-12 11:57:05,080 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:58:10] 2025-10-12 11:57:05,080 | INFO     | aborting loop
[2025-10-12 07:58:10] 2025-10-12 11:57:05,326 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:58:10] 2025-10-12 11:57:05,327 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:58:10] 2025-10-12 11:57:05,366 | INFO     | all data control threads have been joined
[2025-10-12 07:58:10] 2025-10-12 11:57:05,474 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:58:10] 2025-10-12 11:57:05,552 | INFO     | all job control threads have been joined
[2025-10-12 07:58:10] 2025-10-12 11:57:05,558 | INFO     | all payload control threads have been joined
[2025-10-12 07:58:10] 2025-10-12 11:57:05,570 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:58:10] 2025-10-12 11:57:05,586 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:58:10] 2025-10-12 11:57:05,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:58:10] 2025-10-12 11:57:05,982 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:58:10] 2025-10-12 11:57:06,085 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:58:10] 2025-10-12 11:57:06,371 | INFO     | [data] control thread has finished
[2025-10-12 07:58:10] 2025-10-12 11:57:06,388 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:58:10] 2025-10-12 11:57:06,557 | INFO     | [job] control thread has finished
[2025-10-12 07:58:10] 2025-10-12 11:57:06,563 | INFO     | [payload] control thread has finished
[2025-10-12 07:58:10] 2025-10-12 11:57:06,580 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:58:10] 2025-10-12 11:57:06,604 | INFO     | [job] validate thread has finished
[2025-10-12 07:58:10] 2025-10-12 11:57:06,822 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:58:10] 2025-10-12 11:57:09,980 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:58:10] 2025-10-12 11:57:14,844 | INFO     | job.realtimelogging is not enabled
[2025-10-12 07:58:10] 2025-10-12 11:57:15,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:58:10] 2025-10-12 11:57:34,498 | INFO     | PID=28447 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 07:58:10] 2025-10-12 11:57:34,499 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:58:10] 2025-10-12 11:57:34,499 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:58:10] 2025-10-12 11:57:34,499 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:58:10] 2025-10-12 11:58:04,005 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:58:10] 2025-10-12 11:58:05,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325557630784)>', '<ExcThread(monitor, started 140325037274880)>']
[2025-10-12 07:58:10] 2025-10-12 11:58:05,625 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:58:10] 2025-10-12 11:58:05,626 | INFO     | [monitor] control thread has ended
[2025-10-12 07:58:10] 2025-10-12 11:58:10,561 | INFO     | all workflow threads have been joined
[2025-10-12 07:58:10] 2025-10-12 11:58:10,562 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:58:10] 2025-10-12 11:58:10,562 | INFO     | traces error code: 0
[2025-10-12 07:58:10] 2025-10-12 11:58:10,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:58:10] 2025-10-12 11:58:10,662 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:58:10] 2025-10-12 11:58:10,666 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:58:10] 2025-10-12 11:58:10,671 [wrapper] pilotpid: 28447
[2025-10-12 07:58:10] 2025-10-12 11:58:10,676 [wrapper] Pilot exit status: 0
[2025-10-12 07:58:10] 2025-10-12 11:58:10,693 [wrapper] pandaids: 6839221389
[2025-10-12 07:58:10] 2025-10-12 11:58:10,741 [wrapper] cleanup supervisor_pilot  4505 28448
[2025-10-12 07:58:10] 2025-10-12 11:58:10,745 [wrapper] Test setup, not cleaning
[2025-10-12 07:58:10] 2025-10-12 11:58:10,750 [wrapper] apfmon messages muted
[2025-10-12 07:58:10] 2025-10-12 11:58:10,755 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:58:10] 2025-10-12 11:58:10,759 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:58:10]  *** Error codes and diagnostics ***
[2025-10-12 07:58:10]     "exeErrorCode": 0,
[2025-10-12 07:58:10]     "exeErrorDiag": "",
[2025-10-12 07:58:10]     "pilotErrorCode": 0,
[2025-10-12 07:58:10]     "pilotErrorDiag": "",
[2025-10-12 07:58:10]  *** Listing of results directory ***
[2025-10-12 07:58:10] total 404668
[2025-10-12 07:58:10] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 07:58:10] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 21:30 queuedata.json
[2025-10-12 07:58:10] -rwx------ 1 boincer umatlas     36292 Oct 11 21:31 runpilot2-wrapper.sh
[2025-10-12 07:58:10] -rw-r--r-- 1 boincer umatlas       100 Oct 12 05:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:58:10] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 05:44 run_atlas
[2025-10-12 07:58:10] -rw-r--r-- 1 boincer umatlas       105 Oct 12 05:44 job.xml
[2025-10-12 07:58:10] -rw-r--r-- 2 boincer umatlas 218618277 Oct 12 05:44 EVNT.46676267._003146.pool.root.1
[2025-10-12 07:58:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 05:44 start_atlas.sh
[2025-10-12 07:58:10] drwxrwx--x 2 boincer umatlas      4096 Oct 12 05:44 shared
[2025-10-12 07:58:10] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 05:44 input.tar.gz
[2025-10-12 07:58:10] -rw-r--r-- 1 boincer umatlas         0 Oct 12 05:44 boinc_lockfile
[2025-10-12 07:58:10] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 05:44 pandaJob.out
[2025-10-12 07:58:10] -rw------- 1 boincer umatlas    975536 Oct 12 05:44 agis_schedconf.cvmfs.json
[2025-10-12 07:58:10] -rw------- 1 boincer umatlas   1560580 Oct 12 05:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:58:10] drwx------ 5 boincer umatlas      4096 Oct 12 05:44 pilot3
[2025-10-12 07:58:10] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 07:47 init_data.xml
[2025-10-12 07:58:10] -rw------- 1 boincer umatlas 188859918 Oct 12 07:56 HITS.46676269._068474.pool.root.1
[2025-10-12 07:58:10] -rw-r--r-- 1 boincer umatlas       529 Oct 12 07:56 boinc_task_state.xml
[2025-10-12 07:58:10] -rw------- 1 boincer umatlas      1051 Oct 12 07:56 memory_monitor_summary.json
[2025-10-12 07:58:10] -rw------- 1 boincer umatlas    385397 Oct 12 07:56 log.46676269._068474.job.log.tgz.1
[2025-10-12 07:58:10] -rw------- 1 boincer umatlas      7846 Oct 12 07:57 heartbeat.json
[2025-10-12 07:58:10] -rw------- 1 boincer umatlas        95 Oct 12 07:57 pilot_heartbeat.json
[2025-10-12 07:58:10] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 07:57 boinc_mmap_file
[2025-10-12 07:58:10] -rw-r--r-- 1 boincer umatlas        27 Oct 12 07:57 wrapper_checkpoint.txt
[2025-10-12 07:58:10] -rw------- 1 boincer umatlas      4818 Oct 12 07:58 pilotlog.txt
[2025-10-12 07:58:10] -rw------- 1 boincer umatlas   1115733 Oct 12 07:58 log.46676269._068474.job.log.1
[2025-10-12 07:58:10] -rw------- 1 boincer umatlas       357 Oct 12 07:58 output.list
[2025-10-12 07:58:10] -rw-r--r-- 1 boincer umatlas       620 Oct 12 07:58 runtime_log
[2025-10-12 07:58:10] -rw------- 1 boincer umatlas   1515520 Oct 12 07:58 result.tar.gz
[2025-10-12 07:58:10] -rw------- 1 boincer umatlas       660 Oct 12 07:58 zaHLDmE7zR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4CiNDmdfFZRm.diag
[2025-10-12 07:58:10] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 07:58 runtime_log.err
[2025-10-12 07:58:10] -rw-r--r-- 1 boincer umatlas     20822 Oct 12 07:58 stderr.txt
[2025-10-12 07:58:10] HITS file was successfully produced:
[2025-10-12 07:58:10] -rw------- 1 boincer umatlas 188859918 Oct 12 07:56 shared/HITS.pool.root.1
[2025-10-12 07:58:10]  *** Contents of shared directory: ***
[2025-10-12 07:58:10] total 399992
[2025-10-12 07:58:10] -rw-r--r-- 2 boincer umatlas 218618277 Oct 12 05:44 ATLAS.root_0
[2025-10-12 07:58:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 05:44 start_atlas.sh
[2025-10-12 07:58:10] -rw-r--r-- 2 boincer umatlas    569677 Oct 12 05:44 input.tar.gz
[2025-10-12 07:58:10] -rw------- 1 boincer umatlas 188859918 Oct 12 07:56 HITS.pool.root.1
[2025-10-12 07:58:10] -rw------- 1 boincer umatlas   1515520 Oct 12 07:58 result.tar.gz
07:58:12 (24162): run_atlas exited; CPU time 55314.865509
07:58:12 (24162): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN