Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:45:11 (4021601): wrapper (7.7.26015): starting
21:45:11 (4021601): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 21:45:11] Arguments: --nthreads 3
[2025-10-12 21:45:11] Threads: 3
[2025-10-12 21:45:11] Checking for CVMFS
[2025-10-12 21:45:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:45:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:45:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:45:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:45:11] 2.9.2.0 2646070 4844 70344 151635 0 57 29001500 36864001 0 130560 0 3601362 99.991 165149 987 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 21:45:11] CVMFS is ok
[2025-10-12 21:45:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:45:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:45:11] Further information can be found at the LHC@home message board.
[2025-10-12 21:45:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:45:11] Checking for apptainer binary...
[2025-10-12 21:45:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:45:11] Running /usr/bin/apptainer --version
[2025-10-12 21:45:11] apptainer version 1.4.1-1.1
[2025-10-12 21:45:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:45:11] cosA133a
[2025-10-12 21:45:11] apptainer works
[2025-10-12 21:45:11] Set ATHENA_PROC_NUMBER=3
[2025-10-12 21:45:11] Set ATHENA_CORE_NUMBER=3
[2025-10-12 21:45:11] Starting ATLAS job with PandaID=6839387482
[2025-10-12 21:45:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:20:49]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:20:49]  protocol_id=None
[2025-10-12 23:20:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 23:20:49]  replicas=None
[2025-10-12 23:20:49]  scope=mc23_13p6TeV
[2025-10-12 23:20:49]  status=None
[2025-10-12 23:20:49]  status_code=0
[2025-10-12 23:20:49]  storage_token=
[2025-10-12 23:20:49]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6839387482/log.46676269._071373.job.log.tgz.1
[2025-10-12 23:20:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/14/log.46676269._071373.job.log.tgz.1
[2025-10-12 23:20:49]  workdir=None
[2025-10-12 23:20:49] ]
[2025-10-12 23:20:49] 2025-10-12 21:20:10,059 | INFO     | transferring file log.46676269._071373.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6839387482/log.46676269._071373.job.log.tgz.1 to /local/data/boinc/
[2025-10-12 23:20:49] 2025-10-12 21:20:10,060 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6839387482/log.46676269._071373.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0713
[2025-10-12 23:20:49] 2025-10-12 21:20:10,072 | INFO     | adding to output.list: log.46676269._071373.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/14/log.46676269._071373.job.log.tg
[2025-10-12 23:20:49] 2025-10-12 21:20:10,072 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 23:20:49] 2025-10-12 21:20:10,072 | INFO     | summary of transferred files:
[2025-10-12 23:20:49] 2025-10-12 21:20:10,072 | INFO     |  -- lfn=log.46676269._071373.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 23:20:49] 2025-10-12 21:20:10,072 | INFO     | stage-out finished correctly
[2025-10-12 23:20:49] 2025-10-12 21:20:10,716 | INFO     | monitor loop #438: job 0:6839387482 is in state 'finished'
[2025-10-12 23:20:49] 2025-10-12 21:20:10,716 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:20:49] 2025-10-12 21:20:11,820 | INFO     | time since job start (5688s) is within the limit (172800.0s)
[2025-10-12 23:20:49] 2025-10-12 21:20:12,287 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 23:20:49] 2025-10-12 21:20:12,864 | INFO     | job 6839387482 has state=finished
[2025-10-12 23:20:49] 2025-10-12 21:20:12,864 | INFO     | preparing for final server update for job 6839387482 in state='finished'
[2025-10-12 23:20:49] 2025-10-12 21:20:12,866 | INFO     | this job has now completed (state=finished)
[2025-10-12 23:20:49] 2025-10-12 21:20:12,867 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 23:20:49] 2025-10-12 21:20:12,867 | INFO     | log transfer has been attempted: DONE
[2025-10-12 23:20:49] 2025-10-12 21:20:12,867 | INFO     | job 6839387482 has finished - writing final server update
[2025-10-12 23:20:49] 2025-10-12 21:20:12,868 | INFO     | total number of processed events: 400 (read)
[2025-10-12 23:20:49] 2025-10-12 21:20:12,869 | INFO     | executing command: lscpu
[2025-10-12 23:20:49] 2025-10-12 21:20:12,885 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 23:20:49] 2025-10-12 21:20:13,220 | INFO     | monitor loop #439: job 0:6839387482 is in state 'finished'
[2025-10-12 23:20:49] 2025-10-12 21:20:13,220 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:20:49] 2025-10-12 21:20:13,826 | INFO     | time since job start (5690s) is within the limit (172800.0s)
[2025-10-12 23:20:49] 2025-10-12 21:20:15,726 | INFO     | monitor loop #440: job 0:6839387482 is in state 'finished'
[2025-10-12 23:20:49] 2025-10-12 21:20:15,726 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 23:20:49] 2025-10-12 21:20:15,831 | INFO     | time since job start (5692s) is within the limit (172800.0s)
[2025-10-12 23:20:49] 2025-10-12 21:20:17,773 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 23:20:49] 2025-10-12 21:20:17,774 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 4300.586416666666
[2025-10-12 23:20:49] 2025-10-12 21:20:17,775 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6839387482/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:20:49] 2025-10-12 21:20:17,775 | INFO     | extracted standard info from prmon json
[2025-10-12 23:20:49] 2025-10-12 21:20:17,775 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:20:49] 2025-10-12 21:20:17,776 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:20:49] 2025-10-12 21:20:17,776 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:20:49] 2025-10-12 21:20:17,776 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:20:49] 2025-10-12 21:20:17,776 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | sum of square deviations: 197203697.5
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | sum of deviations: -11311600117.5
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | mean x: 1760301246.5
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | mean y: 2436472.895348837
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | -- intersect: 100973280524.86754
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | intersect: 100973280524.86754
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | chi2: 0.10871953676273166
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | -- intersect: 100973280524.86754
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | current memory leak: -57.36 B/s (using 86 data points, chi2=0.11)
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | could have reported an average CPU frequency of 4314 MHz (7 samples)
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | ..............................
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | . Timing measurements:
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | . get job = 0 s
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | . initial setup = 1 s
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | . payload setup = 6 s
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | . stage-in = 0 s
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | . payload execution = 5660 s
[2025-10-12 23:20:49] 2025-10-12 21:20:17,777 | INFO     | . stage-out = 0 s
[2025-10-12 23:20:49] 2025-10-12 21:20:17,778 | INFO     | . log creation = 0 s
[2025-10-12 23:20:49] 2025-10-12 21:20:17,778 | INFO     | ..............................
[2025-10-12 23:20:49] 2025-10-12 21:20:17,809 | INFO     | 
[2025-10-12 23:20:49] 2025-10-12 21:20:17,809 | INFO     | job summary report
[2025-10-12 23:20:49] 2025-10-12 21:20:17,809 | INFO     | --------------------------------------------------
[2025-10-12 23:20:49] 2025-10-12 21:20:17,809 | INFO     | PanDA job id: 6839387482
[2025-10-12 23:20:49] 2025-10-12 21:20:17,809 | INFO     | task id: 46676269
[2025-10-12 23:20:49] 2025-10-12 21:20:17,809 | INFO     | errors: (none)
[2025-10-12 23:20:49] 2025-10-12 21:20:17,809 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:20:49] 2025-10-12 21:20:17,809 | INFO     | pilot state: finished 
[2025-10-12 23:20:49] 2025-10-12 21:20:17,809 | INFO     | transexitcode: 0
[2025-10-12 23:20:49] 2025-10-12 21:20:17,809 | INFO     | exeerrorcode: 0
[2025-10-12 23:20:49] 2025-10-12 21:20:17,809 | INFO     | exeerrordiag: 
[2025-10-12 23:20:49] 2025-10-12 21:20:17,809 | INFO     | exitcode: 0
[2025-10-12 23:20:49] 2025-10-12 21:20:17,809 | INFO     | exitmsg: OK
[2025-10-12 23:20:49] 2025-10-12 21:20:17,810 | INFO     | cpuconsumptiontime: 16301 s
[2025-10-12 23:20:49] 2025-10-12 21:20:17,810 | INFO     | nevents: 400
[2025-10-12 23:20:49] 2025-10-12 21:20:17,810 | INFO     | neventsw: 0
[2025-10-12 23:20:49] 2025-10-12 21:20:17,810 | INFO     | pid: 4031772
[2025-10-12 23:20:49] 2025-10-12 21:20:17,810 | INFO     | pgrp: 4031772
[2025-10-12 23:20:49] 2025-10-12 21:20:17,810 | INFO     | corecount: 3
[2025-10-12 23:20:49] 2025-10-12 21:20:17,810 | INFO     | event service: False
[2025-10-12 23:20:49] 2025-10-12 21:20:17,810 | INFO     | sizes: {0: 2348859, 6: 2349121, 11: 2349149, 5669: 2375909, 5671: 2384913, 5673: 2384969, 5678: 2385291}
[2025-10-12 23:20:49] 2025-10-12 21:20:17,810 | INFO     | --------------------------------------------------
[2025-10-12 23:20:49] 2025-10-12 21:20:17,810 | INFO     | 
[2025-10-12 23:20:49] 2025-10-12 21:20:17,810 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,821 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:20:49] 2025-10-12 21:20:17,822 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,822 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:20:49] 2025-10-12 21:20:17,822 | INFO     | job 6839387482 has completed (purged errors)
[2025-10-12 23:20:49] 2025-10-12 21:20:17,822 | INFO     | overall cleanup function is called
[2025-10-12 23:20:49] 2025-10-12 21:20:18,828 | INFO     | --- collectZombieJob: --- 10, [4031772]
[2025-10-12 23:20:49] 2025-10-12 21:20:18,828 | INFO     | zombie collector waiting for pid 4031772
[2025-10-12 23:20:49] 2025-10-12 21:20:18,829 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:20:49] 2025-10-12 21:20:18,829 | INFO     | collected zombie processes
[2025-10-12 23:20:49] 2025-10-12 21:20:18,829 | INFO     | will attempt to kill all subprocesses of pid=4031772
[2025-10-12 23:20:49] 2025-10-12 21:20:18,867 | INFO     | process IDs to be killed: [4031772] (in reverse order)
[2025-10-12 23:20:49] 2025-10-12 21:20:18,891 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:20:49] 2025-10-12 21:20:18,891 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:20:49] 2025-10-12 21:20:18,892 | INFO     | did not find any defunct processes belonging to 4031772
[2025-10-12 23:20:49] 2025-10-12 21:20:18,893 | INFO     | did not find any defunct processes belonging to 4031772
[2025-10-12 23:20:49] 2025-10-12 21:20:18,893 | INFO     | ready for new job
[2025-10-12 23:20:49] 2025-10-12 21:20:18,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:20:49] 2025-10-12 21:20:18,894 | INFO     | ***************************************
[2025-10-12 23:20:49] 2025-10-12 21:20:18,894 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:20:49] 2025-10-12 21:20:18,894 | INFO     | ***************************************
[2025-10-12 23:20:49] 2025-10-12 21:20:18,894 | INFO     | 
[2025-10-12 23:20:49] 2025-10-12 21:20:18,894 | INFO     | architecture information:
[2025-10-12 23:20:49] 2025-10-12 21:20:18,895 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:20:49] 2025-10-12 21:20:18,905 | INFO     | cat /etc/os-release:
[2025-10-12 23:20:49] NAME="CentOS Linux"
[2025-10-12 23:20:49] VERSION="7 (Core)"
[2025-10-12 23:20:49] ID="centos"
[2025-10-12 23:20:49] ID_LIKE="rhel fedora"
[2025-10-12 23:20:49] VERSION_ID="7"
[2025-10-12 23:20:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:20:49] ANSI_COLOR="0;31"
[2025-10-12 23:20:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:20:49] HOME_URL="https://www.centos.org/"
[2025-10-12 23:20:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:20:49] 
[2025-10-12 23:20:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:20:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:20:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:20:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:20:49] 
[2025-10-12 23:20:49] 2025-10-12 21:20:18,905 | INFO     | ***************************************
[2025-10-12 23:20:49] 2025-10-12 21:20:19,409 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 23:20:49] 2025-10-12 21:20:19,421 | INFO     | sufficient remaining disk space (331028103168 B)
[2025-10-12 23:20:49] 2025-10-12 21:20:19,422 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:20:49] 2025-10-12 21:20:19,422 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:20:49] 2025-10-12 21:20:19,422 | INFO     | update_server=False
[2025-10-12 23:20:49] 2025-10-12 21:20:19,422 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:20:49] 2025-10-12 21:20:19,422 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:20:49] 2025-10-12 21:20:19,422 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:20:49] 2025-10-12 21:20:19,422 | INFO     | aborting loop
[2025-10-12 23:20:49] 2025-10-12 21:20:19,608 | INFO     | all job control threads have been joined
[2025-10-12 23:20:49] 2025-10-12 21:20:19,995 | INFO     | all payload control threads have been joined
[2025-10-12 23:20:49] 2025-10-12 21:20:20,016 | INFO     | all data control threads have been joined
[2025-10-12 23:20:49] 2025-10-12 21:20:20,427 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:20:49] 2025-10-12 21:20:20,428 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:20:49] 2025-10-12 21:20:20,429 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:20:49] 2025-10-12 21:20:20,592 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:20:49] 2025-10-12 21:20:20,614 | INFO     | [job] control thread has finished
[2025-10-12 23:20:49] 2025-10-12 21:20:20,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:20:49] 2025-10-12 21:20:20,716 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:20:49] 2025-10-12 21:20:20,992 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:20:49] 2025-10-12 21:20:21,001 | INFO     | [payload] control thread has finished
[2025-10-12 23:20:49] 2025-10-12 21:20:21,021 | INFO     | [data] control thread has finished
[2025-10-12 23:20:49] 2025-10-12 21:20:21,074 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:20:49] 2025-10-12 21:20:21,631 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:20:49] 2025-10-12 21:20:21,632 | INFO     | [job] validate thread has finished
[2025-10-12 23:20:49] 2025-10-12 21:20:21,761 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:20:49] 2025-10-12 21:20:21,858 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:20:49] 2025-10-12 21:20:22,624 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:20:49] 2025-10-12 21:20:22,830 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:20:49] 2025-10-12 21:20:26,837 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:20:49] 2025-10-12 21:20:30,137 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:20:49] 2025-10-12 21:20:31,280 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139727184480064)>', '<ExcThread(monitor, started 139726552033024)>']
[2025-10-12 23:20:49] 2025-10-12 21:20:36,305 | INFO     | all workflow threads have been joined
[2025-10-12 23:20:49] 2025-10-12 21:20:36,306 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:20:49] 2025-10-12 21:20:36,306 | INFO     | traces error code: 0
[2025-10-12 23:20:49] 2025-10-12 21:20:36,307 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:20:49] 2025-10-12 21:20:48,937 | INFO     | PID=4025327 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:20:49] 2025-10-12 21:20:48,938 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:20:49] 2025-10-12 21:20:48,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:20:49] 2025-10-12 21:20:48,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:20:49] 2025-10-12 21:20:48,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:20:49] 2025-10-12 21:20:48,939 | INFO     | [monitor] control thread has ended
[2025-10-12 23:20:49] 2025-10-12 21:20:48,983 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:20:49] 2025-10-12 21:20:48,987 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:20:49] 2025-10-12 21:20:48,990 [wrapper] pilotpid: 4025327
[2025-10-12 23:20:49] 2025-10-12 21:20:48,993 [wrapper] Pilot exit status: 0
[2025-10-12 23:20:49] 2025-10-12 21:20:49,001 [wrapper] pandaids: 6839387482
[2025-10-12 23:20:49] 2025-10-12 21:20:49,017 [wrapper] cleanup supervisor_pilot 4044539 4025328
[2025-10-12 23:20:49] 2025-10-12 21:20:49,020 [wrapper] Test setup, not cleaning
[2025-10-12 23:20:49] 2025-10-12 21:20:49,023 [wrapper] apfmon messages muted
[2025-10-12 23:20:49] 2025-10-12 21:20:49,025 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:20:49] 2025-10-12 21:20:49,028 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:20:49]  *** Error codes and diagnostics ***
[2025-10-12 23:20:49]     "exeErrorCode": 0,
[2025-10-12 23:20:49]     "exeErrorDiag": "",
[2025-10-12 23:20:49]     "pilotErrorCode": 0,
[2025-10-12 23:20:49]     "pilotErrorDiag": "",
[2025-10-12 23:20:49]  *** Listing of results directory ***
[2025-10-12 23:20:49] total 420292
[2025-10-12 23:20:49] -rw-r--r-- 1 boinc boinc    557409 Oct 12 06:38 pilot3.tar.gz
[2025-10-12 23:20:49] -rwx------ 1 boinc boinc     36292 Oct 12 06:45 runpilot2-wrapper.sh
[2025-10-12 23:20:49] -rw-r--r-- 1 boinc boinc      5112 Oct 12 06:45 queuedata.json
[2025-10-12 23:20:49] -rw-r--r-- 1 boinc boinc       100 Oct 12 21:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:20:49] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 21:45 run_atlas
[2025-10-12 23:20:49] -rw-r--r-- 1 boinc boinc       105 Oct 12 21:45 job.xml
[2025-10-12 23:20:49] -rw-r--r-- 2 boinc boinc 223700133 Oct 12 21:45 EVNT.46676267._004302.pool.root.1
[2025-10-12 23:20:49] -rw-r--r-- 2 boinc boinc    569677 Oct 12 21:45 input.tar.gz
[2025-10-12 23:20:49] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:45 start_atlas.sh
[2025-10-12 23:20:49] drwxrwx--x 2 boinc boinc      4096 Oct 12 21:45 shared
[2025-10-12 23:20:49] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:45 boinc_setup_complete
[2025-10-12 23:20:49] -rw-r--r-- 1 boinc boinc      6200 Oct 12 21:45 init_data.xml
[2025-10-12 23:20:49] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:45 boinc_lockfile
[2025-10-12 23:20:49] -rw-r--r-- 1 boinc boinc      2549 Oct 12 21:45 pandaJob.out
[2025-10-12 23:20:49] -rw------- 1 boinc boinc    975536 Oct 12 21:45 agis_schedconf.cvmfs.json
[2025-10-12 23:20:49] -rw------- 1 boinc boinc   1560580 Oct 12 21:45 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:20:49] drwx------ 5 boinc boinc      4096 Oct 12 21:45 pilot3
[2025-10-12 23:20:49] -rw------- 1 boinc boinc 200564912 Oct 12 23:19 HITS.46676269._071373.pool.root.1
[2025-10-12 23:20:49] -rw------- 1 boinc boinc        95 Oct 12 23:19 pilot_heartbeat.json
[2025-10-12 23:20:49] -rw-r--r-- 1 boinc boinc       529 Oct 12 23:19 boinc_task_state.xml
[2025-10-12 23:20:49] -rw------- 1 boinc boinc      1032 Oct 12 23:20 memory_monitor_summary.json
[2025-10-12 23:20:49] -rw------- 1 boinc boinc    273803 Oct 12 23:20 log.46676269._071373.job.log.tgz.1
[2025-10-12 23:20:49] -rw------- 1 boinc boinc      7765 Oct 12 23:20 heartbeat.json
[2025-10-12 23:20:49] -rw-r--r-- 1 boinc boinc      8192 Oct 12 23:20 boinc_mmap_file
[2025-10-12 23:20:49] -rw-r--r-- 1 boinc boinc        27 Oct 12 23:20 wrapper_checkpoint.txt
[2025-10-12 23:20:49] -rw------- 1 boinc boinc       747 Oct 12 23:20 pilotlog.txt
[2025-10-12 23:20:49] -rw------- 1 boinc boinc    830448 Oct 12 23:20 log.46676269._071373.job.log.1
[2025-10-12 23:20:49] -rw------- 1 boinc boinc       357 Oct 12 23:20 output.list
[2025-10-12 23:20:49] -rw-r--r-- 1 boinc boinc       620 Oct 12 23:20 runtime_log
[2025-10-12 23:20:49] -rw------- 1 boinc boinc   1126400 Oct 12 23:20 result.tar.gz
[2025-10-12 23:20:49] -rw-r--r-- 1 boinc boinc      8787 Oct 12 23:20 runtime_log.err
[2025-10-12 23:20:49] -rw------- 1 boinc boinc       660 Oct 12 23:20 SPoKDmt82R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmEFTMDmd981Ko.diag
[2025-10-12 23:20:49] -rw-r--r-- 1 boinc boinc     21804 Oct 12 23:20 stderr.txt
[2025-10-12 23:20:49] HITS file was successfully produced:
[2025-10-12 23:20:49] -rw------- 1 boinc boinc 200564912 Oct 12 23:19 shared/HITS.pool.root.1
[2025-10-12 23:20:49]  *** Contents of shared directory: ***
[2025-10-12 23:20:49] total 416012
[2025-10-12 23:20:49] -rw-r--r-- 2 boinc boinc 223700133 Oct 12 21:45 ATLAS.root_0
[2025-10-12 23:20:49] -rw-r--r-- 2 boinc boinc    569677 Oct 12 21:45 input.tar.gz
[2025-10-12 23:20:49] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:45 start_atlas.sh
[2025-10-12 23:20:49] -rw------- 1 boinc boinc 200564912 Oct 12 23:19 HITS.pool.root.1
[2025-10-12 23:20:49] -rw------- 1 boinc boinc   1126400 Oct 12 23:20 result.tar.gz
23:20:51 (4021601): run_atlas exited; CPU time 16327.778580
23:20:51 (4021601): called boinc_finish(0)

</stderr_txt>
]]>

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