Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:41:09 (21369): wrapper (7.7.26015): starting
05:41:09 (21369): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 05:41:09] Arguments: --nthreads 8
[2025-10-12 05:41:09] Threads: 8
[2025-10-12 05:41:09] Checking for CVMFS
[2025-10-12 05:41:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:41:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:41:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:41:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:41:09] 2.11.2.0 3643 917 62744 151615 3 57 9779569 18432001 1833 130560 0 1434653 99.996 29227 31837 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 05:41:09] CVMFS is ok
[2025-10-12 05:41:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:41:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:41:09] Further information can be found at the LHC@home message board.
[2025-10-12 05:41:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:41:09] Checking for apptainer binary...
[2025-10-12 05:41:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:41:09] Running /usr/bin/apptainer --version
[2025-10-12 05:41:09] apptainer version 1.3.2-1.el7
[2025-10-12 05:41:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:41:10] c-206-15.aglt2.org
[2025-10-12 05:41:10] apptainer works
[2025-10-12 05:41:10] Set ATHENA_PROC_NUMBER=8
[2025-10-12 05:41:10] Set ATHENA_CORE_NUMBER=8
[2025-10-12 05:41:10] Starting ATLAS job with PandaID=6838990229
[2025-10-12 05:41:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:42:44]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:42:44] 2025-10-12 12:41:54,145 | INFO     | time since job start (10834s) is within the limit (172800.0s)
[2025-10-12 08:42:44] 2025-10-12 12:41:55,345 | INFO     | PID=25104 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 08:42:44] 2025-10-12 12:41:55,346 | INFO     | .. there are 3 such processes running
[2025-10-12 08:42:44] 2025-10-12 12:41:55,598 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 08:42:44] 2025-10-12 12:41:55,601 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2400.2083333333335
[2025-10-12 08:42:44] 2025-10-12 12:41:55,604 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6838990229/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:42:44] 2025-10-12 12:41:55,604 | INFO     | extracted standard info from prmon json
[2025-10-12 08:42:44] 2025-10-12 12:41:55,604 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:42:44] 2025-10-12 12:41:55,604 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:42:44] 2025-10-12 12:41:55,605 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:42:44] 2025-10-12 12:41:55,605 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:42:44] 2025-10-12 12:41:55,607 | INFO     | fitting pss+swap vs Time
[2025-10-12 08:42:44] 2025-10-12 12:41:55,608 | INFO     | sum of square deviations: 1719429448.0
[2025-10-12 08:42:44] 2025-10-12 12:41:55,609 | INFO     | sum of deviations: 9255844637.999998
[2025-10-12 08:42:44] 2025-10-12 12:41:55,609 | INFO     | mean x: 1760267474.0
[2025-10-12 08:42:44] 2025-10-12 12:41:55,609 | INFO     | mean y: 2491050.621468927
[2025-10-12 08:42:44] 2025-10-12 12:41:55,609 | INFO     | -- intersect: -9473188384.565628
[2025-10-12 08:42:44] 2025-10-12 12:41:55,609 | INFO     | intersect: -9473188384.565628
[2025-10-12 08:42:44] 2025-10-12 12:41:55,609 | INFO     | chi2: 1.4616824245957203
[2025-10-12 08:42:44] 2025-10-12 12:41:55,610 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 08:42:44] 2025-10-12 12:41:55,610 | INFO     | sum of deviations: 8920193815.499994
[2025-10-12 08:42:44] 2025-10-12 12:41:55,610 | INFO     | mean x: 1760267321.5
[2025-10-12 08:42:44] 2025-10-12 12:41:55,611 | INFO     | mean y: 2490689.4011627906
[2025-10-12 08:42:44] 2025-10-12 12:41:55,611 | INFO     | -- intersect: -9949359572.542822
[2025-10-12 08:42:44] 2025-10-12 12:41:55,611 | INFO     | intersect: -9949359572.542822
[2025-10-12 08:42:44] 2025-10-12 12:41:55,611 | INFO     | chi2: 1.4625273042335076
[2025-10-12 08:42:44] 2025-10-12 12:41:55,611 | INFO     | current chi2=1.4625273042335076 (change=-0.05780186062105965 %)
[2025-10-12 08:42:44] 2025-10-12 12:41:55,611 | INFO     | right removable region: 171
[2025-10-12 08:42:44] 2025-10-12 12:41:55,612 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 08:42:44] 2025-10-12 12:41:55,612 | INFO     | sum of deviations: -15720841797.999996
[2025-10-12 08:42:44] 2025-10-12 12:41:55,612 | INFO     | mean x: 1760267626.5
[2025-10-12 08:42:44] 2025-10-12 12:41:55,613 | INFO     | mean y: 2517577.6279069767
[2025-10-12 08:42:44] 2025-10-12 12:41:55,613 | INFO     | -- intersect: 17541541270.337536
[2025-10-12 08:42:44] 2025-10-12 12:41:55,613 | INFO     | intersect: 17541541270.337536
[2025-10-12 08:42:44] 2025-10-12 12:41:55,613 | INFO     | chi2: 0.11077111172021184
[2025-10-12 08:42:44] 2025-10-12 12:41:55,613 | INFO     | current chi2=0.11077111172021184 (change=92.42167040827289 %)
[2025-10-12 08:42:44] 2025-10-12 12:41:55,613 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 08:42:44] 2025-10-12 12:41:55,614 | INFO     | sum of deviations: -13143580939.999998
[2025-10-12 08:42:44] 2025-10-12 12:41:55,614 | INFO     | mean x: 1760267779.0
[2025-10-12 08:42:44] 2025-10-12 12:41:55,614 | INFO     | mean y: 2514584.1976047903
[2025-10-12 08:42:44] 2025-10-12 12:41:55,615 | INFO     | -- intersect: 16023166278.33364
[2025-10-12 08:42:44] 2025-10-12 12:41:55,615 | INFO     | intersect: 16023166278.33364
[2025-10-12 08:42:44] 2025-10-12 12:41:55,615 | INFO     | chi2: 0.09856692047656695
[2025-10-12 08:42:44] 2025-10-12 12:41:55,615 | INFO     | current chi2=0.09856692047656695 (change=11.017485564711588 %)
[2025-10-12 08:42:44] 2025-10-12 12:41:55,615 | INFO     | left removable region: 20
[2025-10-12 08:42:44] 2025-10-12 12:41:55,615 | INFO     | sum of square deviations: 1067554900.0
[2025-10-12 08:42:44] 2025-10-12 12:41:55,616 | INFO     | sum of deviations: -1516850217.0
[2025-10-12 08:42:44] 2025-10-12 12:41:55,616 | INFO     | mean x: 1760267901.0
[2025-10-12 08:42:44] 2025-10-12 12:41:55,616 | INFO     | mean y: 2499739.622516556
[2025-10-12 08:42:44] 2025-10-12 12:41:55,616 | INFO     | -- intersect: 2503600851.715192
[2025-10-12 08:42:44] 2025-10-12 12:41:55,617 | INFO     | intersect: 2503600851.715192
[2025-10-12 08:42:44] 2025-10-12 12:41:55,617 | INFO     | chi2: 0.029871547401406965
[2025-10-12 08:42:44] 2025-10-12 12:41:55,617 | INFO     | -- intersect: 2503600851.715192
[2025-10-12 08:42:44] 2025-10-12 12:41:55,617 | INFO     | current memory leak: -1.42 B/s (using 151 data points, chi2=0.03)
[2025-10-12 08:42:44] 2025-10-12 12:41:55,617 | INFO     | could have reported an average CPU frequency of 2562 MHz (9 samples)
[2025-10-12 08:42:44] 2025-10-12 12:41:55,618 | INFO     | ..............................
[2025-10-12 08:42:44] 2025-10-12 12:41:55,618 | INFO     | . Timing measurements:
[2025-10-12 08:42:44] 2025-10-12 12:41:55,618 | INFO     | . get job = 0 s
[2025-10-12 08:42:44] 2025-10-12 12:41:55,618 | INFO     | . initial setup = 2 s
[2025-10-12 08:42:44] 2025-10-12 12:41:55,618 | INFO     | . payload setup = 4 s
[2025-10-12 08:42:44] 2025-10-12 12:41:55,618 | INFO     | . stage-in = 0 s
[2025-10-12 08:42:44] 2025-10-12 12:41:55,618 | INFO     | . payload execution = 10801 s
[2025-10-12 08:42:44] 2025-10-12 12:41:55,618 | INFO     | . stage-out = 2 s
[2025-10-12 08:42:44] 2025-10-12 12:41:55,618 | INFO     | . log creation = 0 s
[2025-10-12 08:42:44] 2025-10-12 12:41:55,618 | INFO     | ..............................
[2025-10-12 08:42:44] 2025-10-12 12:41:55,749 | INFO     | 
[2025-10-12 08:42:44] 2025-10-12 12:41:55,749 | INFO     | job summary report
[2025-10-12 08:42:44] 2025-10-12 12:41:55,749 | INFO     | --------------------------------------------------
[2025-10-12 08:42:44] 2025-10-12 12:41:55,750 | INFO     | PanDA job id: 6838990229
[2025-10-12 08:42:44] 2025-10-12 12:41:55,750 | INFO     | task id: 46676269
[2025-10-12 08:42:44] 2025-10-12 12:41:55,750 | INFO     | errors: (none)
[2025-10-12 08:42:44] 2025-10-12 12:41:55,750 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:42:44] 2025-10-12 12:41:55,750 | INFO     | pilot state: finished 
[2025-10-12 08:42:44] 2025-10-12 12:41:55,750 | INFO     | transexitcode: 0
[2025-10-12 08:42:44] 2025-10-12 12:41:55,751 | INFO     | exeerrorcode: 0
[2025-10-12 08:42:44] 2025-10-12 12:41:55,751 | INFO     | exeerrordiag: 
[2025-10-12 08:42:44] 2025-10-12 12:41:55,751 | INFO     | exitcode: 0
[2025-10-12 08:42:44] 2025-10-12 12:41:55,751 | INFO     | exitmsg: OK
[2025-10-12 08:42:44] 2025-10-12 12:41:55,751 | INFO     | cpuconsumptiontime: 81866 s
[2025-10-12 08:42:44] 2025-10-12 12:41:55,751 | INFO     | nevents: 400
[2025-10-12 08:42:44] 2025-10-12 12:41:55,752 | INFO     | neventsw: 0
[2025-10-12 08:42:44] 2025-10-12 12:41:55,752 | INFO     | pid: 31553
[2025-10-12 08:42:44] 2025-10-12 12:41:55,752 | INFO     | pgrp: 31553
[2025-10-12 08:42:44] 2025-10-12 12:41:55,752 | INFO     | corecount: 8
[2025-10-12 08:42:44] 2025-10-12 12:41:55,752 | INFO     | event service: False
[2025-10-12 08:42:44] 2025-10-12 12:41:55,753 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 12: 2349175, 10810: 2378105, 10814: 2387103, 10815: 2387287, 10820: 2387545}
[2025-10-12 08:42:44] 2025-10-12 12:41:55,753 | INFO     | --------------------------------------------------
[2025-10-12 08:42:44] 2025-10-12 12:41:55,753 | INFO     | 
[2025-10-12 08:42:44] 2025-10-12 12:41:55,753 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 08:42:44] 2025-10-12 12:41:55,768 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,769 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,769 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,769 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,769 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,770 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,770 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,770 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,772 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,772 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:42:44] 2025-10-12 12:41:55,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,772 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:42:44] 2025-10-12 12:41:55,772 | INFO     | job 6838990229 has completed (purged errors)
[2025-10-12 08:42:44] 2025-10-12 12:41:55,773 | INFO     | overall cleanup function is called
[2025-10-12 08:42:44] 2025-10-12 12:41:56,781 | INFO     | --- collectZombieJob: --- 10, [31553]
[2025-10-12 08:42:44] 2025-10-12 12:41:56,781 | INFO     | zombie collector waiting for pid 31553
[2025-10-12 08:42:44] 2025-10-12 12:41:56,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:42:44] 2025-10-12 12:41:56,782 | INFO     | collected zombie processes
[2025-10-12 08:42:44] 2025-10-12 12:41:56,782 | INFO     | will attempt to kill all subprocesses of pid=31553
[2025-10-12 08:42:44] 2025-10-12 12:41:56,944 | INFO     | process IDs to be killed: [31553] (in reverse order)
[2025-10-12 08:42:44] 2025-10-12 12:41:56,982 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:42:44] 2025-10-12 12:41:56,982 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:42:44] 2025-10-12 12:41:56,985 | INFO     | did not find any defunct processes belonging to 31553
[2025-10-12 08:42:44] 2025-10-12 12:41:56,987 | INFO     | did not find any defunct processes belonging to 31553
[2025-10-12 08:42:44] 2025-10-12 12:41:56,988 | INFO     | ready for new job
[2025-10-12 08:42:44] 2025-10-12 12:41:56,988 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:42:44] 2025-10-12 12:41:56,989 | INFO     | ***************************************
[2025-10-12 08:42:44] 2025-10-12 12:41:56,989 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:42:44] 2025-10-12 12:41:56,989 | INFO     | ***************************************
[2025-10-12 08:42:44] 2025-10-12 12:41:56,989 | INFO     | 
[2025-10-12 08:42:44] 2025-10-12 12:41:56,990 | INFO     | architecture information:
[2025-10-12 08:42:44] 2025-10-12 12:41:56,990 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:42:44] 2025-10-12 12:41:57,001 | INFO     | cat /etc/os-release:
[2025-10-12 08:42:44] NAME="CentOS Linux"
[2025-10-12 08:42:44] VERSION="7 (Core)"
[2025-10-12 08:42:44] ID="centos"
[2025-10-12 08:42:44] ID_LIKE="rhel fedora"
[2025-10-12 08:42:44] VERSION_ID="7"
[2025-10-12 08:42:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:42:44] ANSI_COLOR="0;31"
[2025-10-12 08:42:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:42:44] HOME_URL="https://www.centos.org/"
[2025-10-12 08:42:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:42:44] 
[2025-10-12 08:42:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:42:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:42:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:42:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:42:44] 
[2025-10-12 08:42:44] 2025-10-12 12:41:57,001 | INFO     | ***************************************
[2025-10-12 08:42:44] 2025-10-12 12:41:57,504 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 08:42:44] 2025-10-12 12:41:57,520 | INFO     | sufficient remaining disk space (27949793280 B)
[2025-10-12 08:42:44] 2025-10-12 12:41:57,521 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:42:44] 2025-10-12 12:41:57,521 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:42:44] 2025-10-12 12:41:57,521 | INFO     | update_server=False
[2025-10-12 08:42:44] 2025-10-12 12:41:57,521 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:42:44] 2025-10-12 12:41:57,522 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:42:44] 2025-10-12 12:41:57,522 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:42:44] 2025-10-12 12:41:57,522 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:42:44] 2025-10-12 12:41:57,523 | INFO     | aborting loop
[2025-10-12 08:42:44] 2025-10-12 12:41:57,929 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:42:44] 2025-10-12 12:41:58,275 | INFO     | all payload control threads have been joined
[2025-10-12 08:42:44] 2025-10-12 12:41:58,402 | INFO     | all data control threads have been joined
[2025-10-12 08:42:44] 2025-10-12 12:41:58,527 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:42:44] 2025-10-12 12:41:58,527 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:42:44] 2025-10-12 12:41:58,529 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:42:44] 2025-10-12 12:41:58,685 | INFO     | [job] validate thread has finished
[2025-10-12 08:42:44] 2025-10-12 12:41:58,838 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:42:44] 2025-10-12 12:41:58,860 | INFO     | all job control threads have been joined
[2025-10-12 08:42:44] 2025-10-12 12:41:58,912 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:42:44] 2025-10-12 12:41:58,927 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:42:44] 2025-10-12 12:41:59,175 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:42:44] 2025-10-12 12:41:59,280 | INFO     | [payload] control thread has finished
[2025-10-12 08:42:44] 2025-10-12 12:41:59,407 | INFO     | [data] control thread has finished
[2025-10-12 08:42:44] 2025-10-12 12:41:59,717 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:42:44] 2025-10-12 12:41:59,865 | INFO     | [job] control thread has finished
[2025-10-12 08:42:44] 2025-10-12 12:41:59,934 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:42:44] 2025-10-12 12:41:59,961 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:42:44] 2025-10-12 12:42:00,053 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:42:44] 2025-10-12 12:42:01,529 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:42:44] 2025-10-12 12:42:27,618 | INFO     | PID=25104 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 08:42:44] 2025-10-12 12:42:27,618 | INFO     | .. there are 3 such processes running
[2025-10-12 08:42:44] 2025-10-12 12:42:27,619 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:42:44] 2025-10-12 12:42:27,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:42:44] 2025-10-12 12:42:27,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:42:44] 2025-10-12 12:42:37,900 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:42:44] 2025-10-12 12:42:39,160 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140398173255488)>', '<ExcThread(monitor, started 140397439346432)>']
[2025-10-12 08:42:44] 2025-10-12 12:42:39,670 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:42:44] 2025-10-12 12:42:39,670 | INFO     | [monitor] control thread has ended
[2025-10-12 08:42:44] 2025-10-12 12:42:44,185 | INFO     | all workflow threads have been joined
[2025-10-12 08:42:44] 2025-10-12 12:42:44,186 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:42:44] 2025-10-12 12:42:44,186 | INFO     | traces error code: 0
[2025-10-12 08:42:44] 2025-10-12 12:42:44,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:42:44] 2025-10-12 12:42:44,313 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:42:44] 2025-10-12 12:42:44,316 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:42:44] 2025-10-12 12:42:44,319 [wrapper] pilotpid: 25104
[2025-10-12 08:42:44] 2025-10-12 12:42:44,321 [wrapper] Pilot exit status: 0
[2025-10-12 08:42:44] 2025-10-12 12:42:44,330 [wrapper] pandaids: 6838990229
[2025-10-12 08:42:44] 2025-10-12 12:42:44,359 [wrapper] cleanup supervisor_pilot 16975 25105
[2025-10-12 08:42:44] 2025-10-12 12:42:44,361 [wrapper] Test setup, not cleaning
[2025-10-12 08:42:44] 2025-10-12 12:42:44,363 [wrapper] apfmon messages muted
[2025-10-12 08:42:44] 2025-10-12 12:42:44,366 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:42:44] 2025-10-12 12:42:44,368 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:42:44]  *** Error codes and diagnostics ***
[2025-10-12 08:42:44]     "exeErrorCode": 0,
[2025-10-12 08:42:44]     "exeErrorDiag": "",
[2025-10-12 08:42:44]     "pilotErrorCode": 0,
[2025-10-12 08:42:44]     "pilotErrorDiag": "",
[2025-10-12 08:42:44]  *** Listing of results directory ***
[2025-10-12 08:42:44] total 417672
[2025-10-12 08:42:44] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 18:04 pilot3.tar.gz
[2025-10-12 08:42:44] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 18:12 queuedata.json
[2025-10-12 08:42:44] -rwx------ 1 boincer umatlas     36292 Oct 11 18:12 runpilot2-wrapper.sh
[2025-10-12 08:42:44] -rw-r--r-- 1 boincer umatlas       100 Oct 12 05:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:42:44] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 05:41 run_atlas
[2025-10-12 08:42:44] -rw-r--r-- 1 boincer umatlas       105 Oct 12 05:41 job.xml
[2025-10-12 08:42:44] -rw-r--r-- 2 boincer umatlas 222865543 Oct 12 05:41 EVNT.46676267._002649.pool.root.1
[2025-10-12 08:42:44] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 05:41 start_atlas.sh
[2025-10-12 08:42:44] drwxrwx--x 2 boincer umatlas      4096 Oct 12 05:41 shared
[2025-10-12 08:42:44] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 05:41 input.tar.gz
[2025-10-12 08:42:44] -rw-r--r-- 1 boincer umatlas         0 Oct 12 05:41 boinc_lockfile
[2025-10-12 08:42:44] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 05:41 pandaJob.out
[2025-10-12 08:42:44] -rw------- 1 boincer umatlas    975536 Oct 12 05:41 agis_schedconf.cvmfs.json
[2025-10-12 08:42:44] drwx------ 5 boincer umatlas      4096 Oct 12 05:41 pilot3
[2025-10-12 08:42:44] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 08:38 init_data.xml
[2025-10-12 08:42:44] -rw------- 1 boincer umatlas 197051886 Oct 12 08:41 HITS.46676269._065950.pool.root.1
[2025-10-12 08:42:44] -rw-r--r-- 1 boincer umatlas       530 Oct 12 08:41 boinc_task_state.xml
[2025-10-12 08:42:44] -rw------- 1 boincer umatlas      1054 Oct 12 08:41 memory_monitor_summary.json
[2025-10-12 08:42:44] -rw------- 1 boincer umatlas   1560580 Oct 12 08:41 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:42:44] -rw------- 1 boincer umatlas    419770 Oct 12 08:41 log.46676269._065950.job.log.tgz.1
[2025-10-12 08:42:44] -rw------- 1 boincer umatlas      7857 Oct 12 08:41 heartbeat.json
[2025-10-12 08:42:44] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 08:42 boinc_mmap_file
[2025-10-12 08:42:44] -rw-r--r-- 1 boincer umatlas        28 Oct 12 08:42 wrapper_checkpoint.txt
[2025-10-12 08:42:44] -rw------- 1 boincer umatlas        95 Oct 12 08:42 pilot_heartbeat.json
[2025-10-12 08:42:44] -rw------- 1 boincer umatlas      4821 Oct 12 08:42 pilotlog.txt
[2025-10-12 08:42:44] -rw------- 1 boincer umatlas   1516912 Oct 12 08:42 log.46676269._065950.job.log.1
[2025-10-12 08:42:44] -rw------- 1 boincer umatlas       357 Oct 12 08:42 output.list
[2025-10-12 08:42:44] -rw-r--r-- 1 boincer umatlas       620 Oct 12 08:42 runtime_log
[2025-10-12 08:42:44] -rw------- 1 boincer umatlas   1955840 Oct 12 08:42 result.tar.gz
[2025-10-12 08:42:44] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 08:42 runtime_log.err
[2025-10-12 08:42:44] -rw------- 1 boincer umatlas       662 Oct 12 08:42 PCbMDm3zwR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXmhNDmuYHtqn.diag
[2025-10-12 08:42:44] -rw-r--r-- 1 boincer umatlas     21175 Oct 12 08:42 stderr.txt
[2025-10-12 08:42:44] HITS file was successfully produced:
[2025-10-12 08:42:44] -rw------- 1 boincer umatlas 197051886 Oct 12 08:41 shared/HITS.pool.root.1
[2025-10-12 08:42:44]  *** Contents of shared directory: ***
[2025-10-12 08:42:44] total 412572
[2025-10-12 08:42:44] -rw-r--r-- 2 boincer umatlas 222865543 Oct 12 05:41 ATLAS.root_0
[2025-10-12 08:42:44] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 05:41 start_atlas.sh
[2025-10-12 08:42:44] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 05:41 input.tar.gz
[2025-10-12 08:42:44] -rw------- 1 boincer umatlas 197051886 Oct 12 08:41 HITS.pool.root.1
[2025-10-12 08:42:44] -rw------- 1 boincer umatlas   1955840 Oct 12 08:42 result.tar.gz
08:42:46 (21369): run_atlas exited; CPU time 81960.637599
08:42:46 (21369): called boinc_finish(0)

</stderr_txt>
]]>

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