Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:49:08 (3561969): wrapper (7.7.26015): starting
05:49:08 (3561969): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 05:49:08] Arguments: --nthreads 8
[2025-10-12 05:49:08] Threads: 8
[2025-10-12 05:49:08] Checking for CVMFS
[2025-10-12 05:49:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:49:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:49:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:49:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:49:09] 2.13.2.0 126724 124882 316404 151615 0 392 19717756 32935937 39874 16776704 1 290810840 99.673 266032550 20707 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 05:49:09] CVMFS is ok
[2025-10-12 05:49:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:49:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:49:09] Further information can be found at the LHC@home message board.
[2025-10-12 05:49:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:49:09] Checking for apptainer binary...
[2025-10-12 05:49:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:49:09] Running /usr/bin/apptainer --version
[2025-10-12 05:49:09] apptainer version 1.4.3-1.el9
[2025-10-12 05:49:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:49:09] c6-12-27-3.aglt2.org
[2025-10-12 05:49:09] apptainer works
[2025-10-12 05:49:09] Set ATHENA_PROC_NUMBER=8
[2025-10-12 05:49:09] Set ATHENA_CORE_NUMBER=8
[2025-10-12 05:49:09] Starting ATLAS job with PandaID=6839385007
[2025-10-12 05:49:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:46:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:46:52] 2025-10-12 15:45:42,207 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:46:52] 2025-10-12 15:45:42,266 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:46:52] 2025-10-12 15:45:42,267 | INFO     | sum of square deviations: 13181475216.303679
[2025-10-12 11:46:52] 2025-10-12 15:45:42,292 | INFO     | sum of deviations: -2004145811.3495731
[2025-10-12 11:46:52] 2025-10-12 15:45:42,293 | INFO     | mean x: 1760273218.7449856
[2025-10-12 11:46:52] 2025-10-12 15:45:42,293 | INFO     | mean y: 2173348.0859598853
[2025-10-12 11:46:52] 2025-10-12 15:45:42,293 | INFO     | -- intersect: 269809871.3345212
[2025-10-12 11:46:52] 2025-10-12 15:45:42,293 | INFO     | intersect: 269809871.3345212
[2025-10-12 11:46:52] 2025-10-12 15:45:42,294 | INFO     | chi2: 2.3228690281200364
[2025-10-12 11:46:52] 2025-10-12 15:45:42,294 | INFO     | sum of square deviations: 12623064134.5
[2025-10-12 11:46:52] 2025-10-12 15:45:42,337 | INFO     | sum of deviations: 24505371672.999992
[2025-10-12 11:46:52] 2025-10-12 15:45:42,337 | INFO     | mean x: 1760273066.25
[2025-10-12 11:46:52] 2025-10-12 15:45:42,337 | INFO     | mean y: 2180534.8604651163
[2025-10-12 11:46:52] 2025-10-12 15:45:42,337 | INFO     | -- intersect: -3415067866.5425286
[2025-10-12 11:46:52] 2025-10-12 15:45:42,337 | INFO     | intersect: -3415067866.5425286
[2025-10-12 11:46:52] 2025-10-12 15:45:42,338 | INFO     | chi2: 1.629401273358235
[2025-10-12 11:46:52] 2025-10-12 15:45:42,338 | INFO     | current chi2=1.629401273358235 (change=29.85393263102072 %)
[2025-10-12 11:46:52] 2025-10-12 15:45:42,339 | INFO     | sum of square deviations: 12080570020.672565
[2025-10-12 11:46:52] 2025-10-12 15:45:42,353 | INFO     | sum of deviations: 27805592020.637135
[2025-10-12 11:46:52] 2025-10-12 15:45:42,353 | INFO     | mean x: 1760272913.743363
[2025-10-12 11:46:52] 2025-10-12 15:45:42,353 | INFO     | mean y: 2181457.616519174
[2025-10-12 11:46:52] 2025-10-12 15:45:42,353 | INFO     | -- intersect: -4049401406.5007796
[2025-10-12 11:46:52] 2025-10-12 15:45:42,354 | INFO     | intersect: -4049401406.5007796
[2025-10-12 11:46:52] 2025-10-12 15:45:42,383 | INFO     | chi2: 1.6208741830600601
[2025-10-12 11:46:52] 2025-10-12 15:45:42,384 | INFO     | current chi2=1.6208741830600601 (change=0.523326600856298 %)
[2025-10-12 11:46:52] 2025-10-12 15:45:42,384 | INFO     | right removable region: 338
[2025-10-12 11:46:52] 2025-10-12 15:45:42,384 | INFO     | sum of square deviations: 12622948233.488417
[2025-10-12 11:46:52] 2025-10-12 15:45:42,410 | INFO     | sum of deviations: -46380813240.930214
[2025-10-12 11:46:52] 2025-10-12 15:45:42,411 | INFO     | mean x: 1760273371.2558138
[2025-10-12 11:46:52] 2025-10-12 15:45:42,411 | INFO     | mean y: 2185383.340116279
[2025-10-12 11:46:52] 2025-10-12 15:45:42,411 | INFO     | -- intersect: 6470001694.95277
[2025-10-12 11:46:52] 2025-10-12 15:45:42,411 | INFO     | intersect: 6470001694.95277
[2025-10-12 11:46:52] 2025-10-12 15:45:42,412 | INFO     | chi2: 0.967752890850167
[2025-10-12 11:46:52] 2025-10-12 15:45:42,412 | INFO     | current chi2=0.967752890850167 (change=58.338034597094925 %)
[2025-10-12 11:46:52] 2025-10-12 15:45:42,412 | INFO     | sum of square deviations: 12080442535.121023
[2025-10-12 11:46:52] 2025-10-12 15:45:42,440 | INFO     | sum of deviations: -34908928916.64012
[2025-10-12 11:46:52] 2025-10-12 15:45:42,440 | INFO     | mean x: 1760273523.7640119
[2025-10-12 11:46:52] 2025-10-12 15:45:42,440 | INFO     | mean y: 2182141.029498525
[2025-10-12 11:46:52] 2025-10-12 15:45:42,440 | INFO     | -- intersect: 5088855343.296083
[2025-10-12 11:46:52] 2025-10-12 15:45:42,440 | INFO     | intersect: 5088855343.296083
[2025-10-12 11:46:52] 2025-10-12 15:45:42,441 | INFO     | chi2: 0.9074254250291842
[2025-10-12 11:46:52] 2025-10-12 15:45:42,441 | INFO     | current chi2=0.9074254250291842 (change=6.233767565187573 %)
[2025-10-12 11:46:52] 2025-10-12 15:45:42,441 | INFO     | left removable region: 20
[2025-10-12 11:46:52] 2025-10-12 15:45:42,480 | INFO     | sum of square deviations: 9971553907.198217
[2025-10-12 11:46:52] 2025-10-12 15:45:42,483 | INFO     | sum of deviations: 7877190519.849062
[2025-10-12 11:46:52] 2025-10-12 15:45:42,483 | INFO     | mean x: 1760273493.2735848
[2025-10-12 11:46:52] 2025-10-12 15:45:42,483 | INFO     | mean y: 2186643.5534591195
[2025-10-12 11:46:52] 2025-10-12 15:45:42,484 | INFO     | -- intersect: -1388369913.890085
[2025-10-12 11:46:52] 2025-10-12 15:45:42,484 | INFO     | intersect: -1388369913.890085
[2025-10-12 11:46:52] 2025-10-12 15:45:42,484 | INFO     | chi2: 0.12385025895498165
[2025-10-12 11:46:52] 2025-10-12 15:45:42,484 | INFO     | -- intersect: -1388369913.890085
[2025-10-12 11:46:52] 2025-10-12 15:45:42,485 | INFO     | current memory leak: 0.79 B/s (using 318 data points, chi2=0.12)
[2025-10-12 11:46:52] 2025-10-12 15:45:42,518 | INFO     | could have reported an average CPU frequency of 2635 MHz (15 samples)
[2025-10-12 11:46:52] 2025-10-12 15:45:42,519 | INFO     | ..............................
[2025-10-12 11:46:52] 2025-10-12 15:45:42,519 | INFO     | . Timing measurements:
[2025-10-12 11:46:52] 2025-10-12 15:45:42,519 | INFO     | . get job = 0 s
[2025-10-12 11:46:52] 2025-10-12 15:45:42,519 | INFO     | . initial setup = 3 s
[2025-10-12 11:46:52] 2025-10-12 15:45:42,519 | INFO     | . payload setup = 9 s
[2025-10-12 11:46:52] 2025-10-12 15:45:42,519 | INFO     | . stage-in = 0 s
[2025-10-12 11:46:52] 2025-10-12 15:45:42,519 | INFO     | . payload execution = 21282 s
[2025-10-12 11:46:52] 2025-10-12 15:45:42,519 | INFO     | . stage-out = 10 s
[2025-10-12 11:46:52] 2025-10-12 15:45:42,519 | INFO     | . log creation = 1 s
[2025-10-12 11:46:52] 2025-10-12 15:45:42,519 | INFO     | ..............................
[2025-10-12 11:46:52] 2025-10-12 15:45:43,700 | INFO     | 
[2025-10-12 11:46:52] 2025-10-12 15:45:43,700 | INFO     | job summary report
[2025-10-12 11:46:52] 2025-10-12 15:45:43,700 | INFO     | --------------------------------------------------
[2025-10-12 11:46:52] 2025-10-12 15:45:43,700 | INFO     | PanDA job id: 6839385007
[2025-10-12 11:46:52] 2025-10-12 15:45:43,700 | INFO     | task id: 46676269
[2025-10-12 11:46:52] 2025-10-12 15:45:43,701 | INFO     | errors: (none)
[2025-10-12 11:46:52] 2025-10-12 15:45:43,701 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:46:52] 2025-10-12 15:45:43,701 | INFO     | pilot state: finished 
[2025-10-12 11:46:52] 2025-10-12 15:45:43,701 | INFO     | transexitcode: 0
[2025-10-12 11:46:52] 2025-10-12 15:45:43,701 | INFO     | exeerrorcode: 0
[2025-10-12 11:46:52] 2025-10-12 15:45:43,701 | INFO     | exeerrordiag: 
[2025-10-12 11:46:52] 2025-10-12 15:45:43,701 | INFO     | exitcode: 0
[2025-10-12 11:46:52] 2025-10-12 15:45:43,701 | INFO     | exitmsg: OK
[2025-10-12 11:46:52] 2025-10-12 15:45:43,701 | INFO     | cpuconsumptiontime: 48568 s
[2025-10-12 11:46:52] 2025-10-12 15:45:43,701 | INFO     | nevents: 400
[2025-10-12 11:46:52] 2025-10-12 15:45:43,701 | INFO     | neventsw: 0
[2025-10-12 11:46:52] 2025-10-12 15:45:43,701 | INFO     | pid: 3574387
[2025-10-12 11:46:52] 2025-10-12 15:45:43,701 | INFO     | pgrp: 3574387
[2025-10-12 11:46:52] 2025-10-12 15:45:43,702 | INFO     | corecount: 8
[2025-10-12 11:46:52] 2025-10-12 15:45:43,702 | INFO     | event service: False
[2025-10-12 11:46:52] 2025-10-12 15:45:43,702 | INFO     | sizes: {0: 2348807, 8: 2349069, 11: 2349097, 21295: 2382576, 21296: 2382575, 21306: 2391629, 21309: 2391813, 21358: 2392007}
[2025-10-12 11:46:52] 2025-10-12 15:45:43,702 | INFO     | --------------------------------------------------
[2025-10-12 11:46:52] 2025-10-12 15:45:43,702 | INFO     | 
[2025-10-12 11:46:52] 2025-10-12 15:45:43,702 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 11:46:52] 2025-10-12 15:45:43,996 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,996 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,996 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,996 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,996 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,997 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,997 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,997 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,997 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,997 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,997 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,997 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,997 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:46:52] 2025-10-12 15:45:43,997 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,997 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:46:52] 2025-10-12 15:45:43,997 | INFO     | job 6839385007 has completed (purged errors)
[2025-10-12 11:46:52] 2025-10-12 15:45:43,998 | INFO     | overall cleanup function is called
[2025-10-12 11:46:52] 2025-10-12 15:45:45,044 | INFO     | --- collectZombieJob: --- 10, [3574387]
[2025-10-12 11:46:52] 2025-10-12 15:45:45,044 | INFO     | zombie collector waiting for pid 3574387
[2025-10-12 11:46:52] 2025-10-12 15:45:45,044 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:46:52] 2025-10-12 15:45:45,044 | INFO     | collected zombie processes
[2025-10-12 11:46:52] 2025-10-12 15:45:45,045 | INFO     | will attempt to kill all subprocesses of pid=3574387
[2025-10-12 11:46:52] 2025-10-12 15:45:52,116 | INFO     | process IDs to be killed: [3574387] (in reverse order)
[2025-10-12 11:46:52] 2025-10-12 15:45:52,362 | INFO     | PID=3566643 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:46:52] 2025-10-12 15:45:52,362 | INFO     | .. there are 50 such processes running
[2025-10-12 11:46:52] 2025-10-12 15:45:52,742 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:46:52] 2025-10-12 15:45:52,743 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:46:52] 2025-10-12 15:45:52,796 | INFO     | did not find any defunct processes belonging to 3574387
[2025-10-12 11:46:52] 2025-10-12 15:45:52,830 | INFO     | did not find any defunct processes belonging to 3574387
[2025-10-12 11:46:52] 2025-10-12 15:45:52,830 | INFO     | ready for new job
[2025-10-12 11:46:52] 2025-10-12 15:45:52,830 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:46:52] 2025-10-12 15:45:52,837 | INFO     | ***************************************
[2025-10-12 11:46:52] 2025-10-12 15:45:52,838 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:46:52] 2025-10-12 15:45:52,838 | INFO     | ***************************************
[2025-10-12 11:46:52] 2025-10-12 15:45:52,838 | INFO     | 
[2025-10-12 11:46:52] 2025-10-12 15:45:52,860 | INFO     | architecture information:
[2025-10-12 11:46:52] 2025-10-12 15:45:52,869 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:46:52] 2025-10-12 15:45:52,991 | INFO     | cat /etc/os-release:
[2025-10-12 11:46:52] NAME="CentOS Linux"
[2025-10-12 11:46:52] VERSION="7 (Core)"
[2025-10-12 11:46:52] ID="centos"
[2025-10-12 11:46:52] ID_LIKE="rhel fedora"
[2025-10-12 11:46:52] VERSION_ID="7"
[2025-10-12 11:46:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:46:52] ANSI_COLOR="0;31"
[2025-10-12 11:46:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:46:52] HOME_URL="https://www.centos.org/"
[2025-10-12 11:46:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:46:52] 
[2025-10-12 11:46:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:46:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:46:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:46:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:46:52] 
[2025-10-12 11:46:52] 2025-10-12 15:45:52,992 | INFO     | ***************************************
[2025-10-12 11:46:52] 2025-10-12 15:45:53,495 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 11:46:52] 2025-10-12 15:45:53,583 | INFO     | sufficient remaining disk space (94133813248 B)
[2025-10-12 11:46:52] 2025-10-12 15:45:53,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:46:52] 2025-10-12 15:45:53,584 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:46:52] 2025-10-12 15:45:53,584 | INFO     | update_server=False
[2025-10-12 11:46:52] 2025-10-12 15:45:53,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:46:52] 2025-10-12 15:45:53,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:46:52] 2025-10-12 15:45:53,585 | INFO     | aborting loop
[2025-10-12 11:46:52] 2025-10-12 15:45:53,585 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:46:52] 2025-10-12 15:45:53,589 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:46:52] 2025-10-12 15:45:53,840 | INFO     | all job control threads have been joined
[2025-10-12 11:46:52] 2025-10-12 15:45:54,140 | INFO     | all data control threads have been joined
[2025-10-12 11:46:52] 2025-10-12 15:45:54,593 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:46:52] 2025-10-12 15:45:54,600 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:46:52] 2025-10-12 15:45:54,607 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:46:52] 2025-10-12 15:45:54,846 | INFO     | [job] control thread has finished
[2025-10-12 11:46:52] 2025-10-12 15:45:54,966 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:46:52] 2025-10-12 15:45:54,970 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:46:52] 2025-10-12 15:45:55,069 | INFO     | all payload control threads have been joined
[2025-10-12 11:46:52] 2025-10-12 15:45:55,146 | INFO     | [data] control thread has finished
[2025-10-12 11:46:52] 2025-10-12 15:45:55,342 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:46:52] 2025-10-12 15:45:55,491 | INFO     | [job] validate thread has finished
[2025-10-12 11:46:52] 2025-10-12 15:45:55,492 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:46:52] 2025-10-12 15:45:55,498 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:46:52] 2025-10-12 15:45:55,504 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:46:52] 2025-10-12 15:45:55,596 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:46:52] 2025-10-12 15:45:55,911 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:46:52] 2025-10-12 15:45:56,062 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:46:52] 2025-10-12 15:45:56,075 | INFO     | [payload] control thread has finished
[2025-10-12 11:46:52] 2025-10-12 15:45:59,920 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:46:52] 2025-10-12 15:46:09,036 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:46:52] 2025-10-12 15:46:10,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139898402686784)>', '<ExcThread(monitor, started 139898057111296)>']
[2025-10-12 11:46:52] 2025-10-12 15:46:15,068 | INFO     | all workflow threads have been joined
[2025-10-12 11:46:52] 2025-10-12 15:46:15,068 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:46:52] 2025-10-12 15:46:15,069 | INFO     | traces error code: 0
[2025-10-12 11:46:52] 2025-10-12 15:46:15,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:46:52] 2025-10-12 15:46:29,640 | INFO     | PID=3566643 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:46:52] 2025-10-12 15:46:29,641 | INFO     | .. there are 50 such processes running
[2025-10-12 11:46:52] 2025-10-12 15:46:29,643 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:46:52] 2025-10-12 15:46:29,643 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:46:52] 2025-10-12 15:46:29,643 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:46:52] 2025-10-12 15:46:29,644 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:46:52] 2025-10-12 15:46:29,644 | INFO     | [monitor] control thread has ended
[2025-10-12 11:46:52] 2025-10-12 15:46:30,139 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:46:52] 2025-10-12 15:46:30,151 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:46:52] 2025-10-12 15:46:30,184 [wrapper] pilotpid: 3566643
[2025-10-12 11:46:52] 2025-10-12 15:46:30,227 [wrapper] Pilot exit status: 0
[2025-10-12 11:46:52] 2025-10-12 15:46:30,387 [wrapper] pandaids: 6839385007
[2025-10-12 11:46:52] 2025-10-12 15:46:31,578 [wrapper] cleanup supervisor_pilot  776632 3566644
[2025-10-12 11:46:52] 2025-10-12 15:46:31,598 [wrapper] Test setup, not cleaning
[2025-10-12 11:46:52] 2025-10-12 15:46:31,625 [wrapper] apfmon messages muted
[2025-10-12 11:46:52] 2025-10-12 15:46:31,662 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:46:52] 2025-10-12 15:46:31,695 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:46:52]  *** Error codes and diagnostics ***
[2025-10-12 11:46:52]     "exeErrorCode": 0,
[2025-10-12 11:46:52]     "exeErrorDiag": "",
[2025-10-12 11:46:52]     "pilotErrorCode": 0,
[2025-10-12 11:46:52]     "pilotErrorDiag": "",
[2025-10-12 11:46:52]  *** Listing of results directory ***
[2025-10-12 11:46:52] total 412984
[2025-10-12 11:46:52] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 23:35 pilot3.tar.gz
[2025-10-12 11:46:52] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 23:55 queuedata.json
[2025-10-12 11:46:52] -rwx------. 1 boincer umatlas     36292 Oct 11 23:55 runpilot2-wrapper.sh
[2025-10-12 11:46:52] -rw-r--r--. 1 boincer umatlas       100 Oct 12 05:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:46:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 05:49 run_atlas
[2025-10-12 11:46:52] -rw-r--r--. 1 boincer umatlas       105 Oct 12 05:49 job.xml
[2025-10-12 11:46:52] -rw-r--r--. 2 boincer umatlas 222737650 Oct 12 05:49 EVNT.46676267._001230.pool.root.1
[2025-10-12 11:46:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 05:49 start_atlas.sh
[2025-10-12 11:46:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 05:49 shared
[2025-10-12 11:46:52] -rw-r--r--. 2 boincer umatlas    569693 Oct 12 05:49 input.tar.gz
[2025-10-12 11:46:52] -rw-r--r--. 1 boincer umatlas         0 Oct 12 05:49 boinc_lockfile
[2025-10-12 11:46:52] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 05:49 pandaJob.out
[2025-10-12 11:46:52] -rw-------. 1 boincer umatlas    975536 Oct 12 05:49 agis_schedconf.cvmfs.json
[2025-10-12 11:46:52] drwx------. 5 boincer umatlas      4096 Oct 12 05:49 pilot3
[2025-10-12 11:46:52] -rw-------. 1 boincer umatlas 190449928 Oct 12 11:43 HITS.46676269._070251.pool.root.1
[2025-10-12 11:46:52] -rw-r--r--. 1 boincer umatlas       531 Oct 12 11:43 boinc_task_state.xml
[2025-10-12 11:46:52] -rw-------. 1 boincer umatlas      1044 Oct 12 11:44 memory_monitor_summary.json
[2025-10-12 11:46:52] -rw-------. 1 boincer umatlas   1560580 Oct 12 11:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:46:52] -rw-------. 1 boincer umatlas    532805 Oct 12 11:44 log.46676269._070251.job.log.tgz.1
[2025-10-12 11:46:52] -rw-------. 1 boincer umatlas      7832 Oct 12 11:45 heartbeat.json
[2025-10-12 11:46:52] -rw-------. 1 boincer umatlas        95 Oct 12 11:46 pilot_heartbeat.json
[2025-10-12 11:46:52] -rw-------. 1 boincer umatlas       823 Oct 12 11:46 pilotlog.txt
[2025-10-12 11:46:52] -rw-r--r--. 1 boincer umatlas        28 Oct 12 11:46 wrapper_checkpoint.txt
[2025-10-12 11:46:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 11:46 boinc_mmap_file
[2025-10-12 11:46:52] -rw-------. 1 boincer umatlas   2371428 Oct 12 11:46 log.46676269._070251.job.log.1
[2025-10-12 11:46:52] -rw-------. 1 boincer umatlas       357 Oct 12 11:46 output.list
[2025-10-12 11:46:52] -rw-r--r--. 1 boincer umatlas       620 Oct 12 11:46 runtime_log
[2025-10-12 11:46:52] -rw-------. 1 boincer umatlas   2918400 Oct 12 11:46 result.tar.gz
[2025-10-12 11:46:52] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 11:46 runtime_log.err
[2025-10-12 11:46:52] -rw-------. 1 boincer umatlas       658 Oct 12 11:46 KoOMDmUM2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmC7SMDmLGlT4n.diag
[2025-10-12 11:46:52] -rw-r--r--. 1 boincer umatlas      6861 Oct 12 11:46 init_data.xml
[2025-10-12 11:46:52] -rw-r--r--. 1 boincer umatlas     21104 Oct 12 11:46 stderr.txt
[2025-10-12 11:46:52] HITS file was successfully produced:
[2025-10-12 11:46:52] -rw-------. 1 boincer umatlas 190449928 Oct 12 11:43 shared/HITS.pool.root.1
[2025-10-12 11:46:52]  *** Contents of shared directory: ***
[2025-10-12 11:46:52] total 406944
[2025-10-12 11:46:52] -rw-r--r--. 2 boincer umatlas 222737650 Oct 12 05:49 ATLAS.root_0
[2025-10-12 11:46:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 05:49 start_atlas.sh
[2025-10-12 11:46:52] -rw-r--r--. 2 boincer umatlas    569693 Oct 12 05:49 input.tar.gz
[2025-10-12 11:46:52] -rw-------. 1 boincer umatlas 190449928 Oct 12 11:43 HITS.pool.root.1
[2025-10-12 11:46:52] -rw-------. 1 boincer umatlas   2918400 Oct 12 11:46 result.tar.gz
11:46:54 (3561969): run_atlas exited; CPU time 49673.665749
11:46:54 (3561969): called boinc_finish(0)

</stderr_txt>
]]>

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