Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:41:00 (5610): wrapper (7.7.26015): starting
05:41:00 (5610): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 05:41:00] Arguments: --nthreads 8
[2025-10-12 05:41:00] Threads: 8
[2025-10-12 05:41:00] Checking for CVMFS
[2025-10-12 05:41:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:41:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:41:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:41:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:41:00] 2.11.2.0 2692 209993 122524 151615 3 57 13449565 20275201 1 130560 1 74422978 99.976 11363827 10737 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 05:41:00] CVMFS is ok
[2025-10-12 05:41:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:41:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:41:00] Further information can be found at the LHC@home message board.
[2025-10-12 05:41:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:41:00] Checking for apptainer binary...
[2025-10-12 05:41:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:41:00] Running /usr/bin/apptainer --version
[2025-10-12 05:41:00] apptainer version 1.3.2-1.el7
[2025-10-12 05:41:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:41:01] c-204-1.aglt2.org
[2025-10-12 05:41:01] apptainer works
[2025-10-12 05:41:01] Set ATHENA_PROC_NUMBER=8
[2025-10-12 05:41:01] Set ATHENA_CORE_NUMBER=8
[2025-10-12 05:41:01] Starting ATLAS job with PandaID=6839242245
[2025-10-12 05:41:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:49:39]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:49:39] 2025-10-12 11:48:39,537 | INFO     | monitor loop #569: job 0:6839242245 is in state 'finished'
[2025-10-12 07:49:39] 2025-10-12 11:48:39,537 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 07:49:39] 2025-10-12 11:48:39,851 | INFO     | time since job start (7639s) is within the limit (172800.0s)
[2025-10-12 07:49:39] 2025-10-12 11:48:40,945 | INFO     | PID=9348 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 07:49:39] 2025-10-12 11:48:41,088 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 07:49:39] 2025-10-12 11:48:41,091 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-10-12 07:49:39] 2025-10-12 11:48:41,094 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839242245/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 07:49:39] 2025-10-12 11:48:41,094 | INFO     | extracted standard info from prmon json
[2025-10-12 07:49:39] 2025-10-12 11:48:41,095 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 07:49:39] 2025-10-12 11:48:41,095 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 07:49:39] 2025-10-12 11:48:41,095 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 07:49:39] 2025-10-12 11:48:41,096 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 07:49:39] 2025-10-12 11:48:41,098 | INFO     | fitting pss+swap vs Time
[2025-10-12 07:49:39] 2025-10-12 11:48:41,098 | INFO     | sum of square deviations: 605592750.0
[2025-10-12 07:49:39] 2025-10-12 11:48:41,099 | INFO     | sum of deviations: 3868101072.9999995
[2025-10-12 07:49:39] 2025-10-12 11:48:41,099 | INFO     | mean x: 1760265893.0
[2025-10-12 07:49:39] 2025-10-12 11:48:41,099 | INFO     | mean y: 2497027.16
[2025-10-12 07:49:39] 2025-10-12 11:48:41,099 | INFO     | -- intersect: -11240844953.86372
[2025-10-12 07:49:39] 2025-10-12 11:48:41,099 | INFO     | intersect: -11240844953.86372
[2025-10-12 07:49:39] 2025-10-12 11:48:41,100 | INFO     | chi2: 1.5041312890382132
[2025-10-12 07:49:39] 2025-10-12 11:48:41,100 | INFO     | sum of square deviations: 535786790.0
[2025-10-12 07:49:39] 2025-10-12 11:48:41,101 | INFO     | sum of deviations: 3799825968.999998
[2025-10-12 07:49:39] 2025-10-12 11:48:41,101 | INFO     | mean x: 1760265740.5
[2025-10-12 07:49:39] 2025-10-12 11:48:41,101 | INFO     | mean y: 2496877.933333333
[2025-10-12 07:49:39] 2025-10-12 11:48:41,101 | INFO     | -- intersect: -12481393352.15784
[2025-10-12 07:49:39] 2025-10-12 11:48:41,101 | INFO     | intersect: -12481393352.15784
[2025-10-12 07:49:39] 2025-10-12 11:48:41,101 | INFO     | chi2: 1.5057170959804813
[2025-10-12 07:49:39] 2025-10-12 11:48:41,101 | INFO     | current chi2=1.5057170959804813 (change=-0.10543008803985966 %)
[2025-10-12 07:49:39] 2025-10-12 11:48:41,102 | INFO     | right removable region: 119
[2025-10-12 07:49:39] 2025-10-12 11:48:41,102 | INFO     | sum of square deviations: 535786790.0
[2025-10-12 07:49:39] 2025-10-12 11:48:41,102 | INFO     | sum of deviations: -13768635861.999998
[2025-10-12 07:49:39] 2025-10-12 11:48:41,103 | INFO     | mean x: 1760266045.5
[2025-10-12 07:49:39] 2025-10-12 11:48:41,103 | INFO     | mean y: 2534813.15
[2025-10-12 07:49:39] 2025-10-12 11:48:41,103 | INFO     | -- intersect: 45237808718.899376
[2025-10-12 07:49:39] 2025-10-12 11:48:41,103 | INFO     | intersect: 45237808718.899376
[2025-10-12 07:49:39] 2025-10-12 11:48:41,103 | INFO     | chi2: 0.1112113367521947
[2025-10-12 07:49:39] 2025-10-12 11:48:41,103 | INFO     | current chi2=0.1112113367521947 (change=92.60627462757546 %)
[2025-10-12 07:49:39] 2025-10-12 11:48:41,104 | INFO     | sum of square deviations: 471562330.0
[2025-10-12 07:49:39] 2025-10-12 11:48:41,104 | INFO     | sum of deviations: -10348224403.0
[2025-10-12 07:49:39] 2025-10-12 11:48:41,104 | INFO     | mean x: 1760266198.0
[2025-10-12 07:49:39] 2025-10-12 11:48:41,104 | INFO     | mean y: 2526661.947826087
[2025-10-12 07:49:39] 2025-10-12 11:48:41,104 | INFO     | -- intersect: 38630781013.64642
[2025-10-12 07:49:39] 2025-10-12 11:48:41,105 | INFO     | intersect: 38630781013.64642
[2025-10-12 07:49:39] 2025-10-12 11:48:41,105 | INFO     | chi2: 0.10305219785632612
[2025-10-12 07:49:39] 2025-10-12 11:48:41,105 | INFO     | current chi2=0.10305219785632612 (change=7.336607160877029 %)
[2025-10-12 07:49:39] 2025-10-12 11:48:41,105 | INFO     | left removable region: 20
[2025-10-12 07:49:39] 2025-10-12 11:48:41,105 | INFO     | sum of square deviations: 300842850.0
[2025-10-12 07:49:39] 2025-10-12 11:48:41,106 | INFO     | sum of deviations: -1667588049.0000007
[2025-10-12 07:49:39] 2025-10-12 11:48:41,106 | INFO     | mean x: 1760266320.0
[2025-10-12 07:49:39] 2025-10-12 11:48:41,106 | INFO     | mean y: 2503351.0303030303
[2025-10-12 07:49:39] 2025-10-12 11:48:41,106 | INFO     | -- intersect: 9759753949.770514
[2025-10-12 07:49:39] 2025-10-12 11:48:41,106 | INFO     | intersect: 9759753949.770514
[2025-10-12 07:49:39] 2025-10-12 11:48:41,107 | INFO     | chi2: 0.03736528627452719
[2025-10-12 07:49:39] 2025-10-12 11:48:41,107 | INFO     | -- intersect: 9759753949.770514
[2025-10-12 07:49:39] 2025-10-12 11:48:41,107 | INFO     | current memory leak: -5.54 B/s (using 99 data points, chi2=0.04)
[2025-10-12 07:49:39] 2025-10-12 11:48:41,107 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2025-10-12 07:49:39] 2025-10-12 11:48:41,107 | INFO     | ..............................
[2025-10-12 07:49:39] 2025-10-12 11:48:41,107 | INFO     | . Timing measurements:
[2025-10-12 07:49:39] 2025-10-12 11:48:41,108 | INFO     | . get job = 0 s
[2025-10-12 07:49:39] 2025-10-12 11:48:41,108 | INFO     | . initial setup = 2 s
[2025-10-12 07:49:39] 2025-10-12 11:48:41,108 | INFO     | . payload setup = 8 s
[2025-10-12 07:49:39] 2025-10-12 11:48:41,108 | INFO     | . stage-in = 0 s
[2025-10-12 07:49:39] 2025-10-12 11:48:41,108 | INFO     | . payload execution = 7603 s
[2025-10-12 07:49:39] 2025-10-12 11:48:41,108 | INFO     | . stage-out = 0 s
[2025-10-12 07:49:39] 2025-10-12 11:48:41,108 | INFO     | . log creation = 0 s
[2025-10-12 07:49:39] 2025-10-12 11:48:41,108 | INFO     | ..............................
[2025-10-12 07:49:39] 2025-10-12 11:48:41,200 | INFO     | 
[2025-10-12 07:49:39] 2025-10-12 11:48:41,200 | INFO     | job summary report
[2025-10-12 07:49:39] 2025-10-12 11:48:41,201 | INFO     | --------------------------------------------------
[2025-10-12 07:49:39] 2025-10-12 11:48:41,201 | INFO     | PanDA job id: 6839242245
[2025-10-12 07:49:39] 2025-10-12 11:48:41,201 | INFO     | task id: 46676269
[2025-10-12 07:49:39] 2025-10-12 11:48:41,201 | INFO     | errors: (none)
[2025-10-12 07:49:39] 2025-10-12 11:48:41,201 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:49:39] 2025-10-12 11:48:41,201 | INFO     | pilot state: finished 
[2025-10-12 07:49:39] 2025-10-12 11:48:41,202 | INFO     | transexitcode: 0
[2025-10-12 07:49:39] 2025-10-12 11:48:41,202 | INFO     | exeerrorcode: 0
[2025-10-12 07:49:39] 2025-10-12 11:48:41,202 | INFO     | exeerrordiag: 
[2025-10-12 07:49:39] 2025-10-12 11:48:41,202 | INFO     | exitcode: 0
[2025-10-12 07:49:39] 2025-10-12 11:48:41,202 | INFO     | exitmsg: OK
[2025-10-12 07:49:39] 2025-10-12 11:48:41,202 | INFO     | cpuconsumptiontime: 56493 s
[2025-10-12 07:49:39] 2025-10-12 11:48:41,203 | INFO     | nevents: 400
[2025-10-12 07:49:39] 2025-10-12 11:48:41,203 | INFO     | neventsw: 0
[2025-10-12 07:49:39] 2025-10-12 11:48:41,203 | INFO     | pid: 15818
[2025-10-12 07:49:39] 2025-10-12 11:48:41,203 | INFO     | pgrp: 15818
[2025-10-12 07:49:39] 2025-10-12 11:48:41,203 | INFO     | corecount: 8
[2025-10-12 07:49:39] 2025-10-12 11:48:41,203 | INFO     | event service: False
[2025-10-12 07:49:39] 2025-10-12 11:48:41,204 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 12: 2349175, 7615: 2376753, 7616: 2376752, 7617: 2385990, 7624: 2386156}
[2025-10-12 07:49:39] 2025-10-12 11:48:41,204 | INFO     | --------------------------------------------------
[2025-10-12 07:49:39] 2025-10-12 11:48:41,204 | INFO     | 
[2025-10-12 07:49:39] 2025-10-12 11:48:41,204 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 07:49:39] 2025-10-12 11:48:41,236 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,236 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,237 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,237 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,237 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,237 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,237 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,237 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,238 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,238 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,238 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,238 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,238 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,239 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,239 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,239 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,239 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,239 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:49:39] 2025-10-12 11:48:41,240 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,240 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:49:39] 2025-10-12 11:48:41,240 | INFO     | job 6839242245 has completed (purged errors)
[2025-10-12 07:49:39] 2025-10-12 11:48:41,240 | INFO     | overall cleanup function is called
[2025-10-12 07:49:39] 2025-10-12 11:48:42,248 | INFO     | --- collectZombieJob: --- 10, [15818]
[2025-10-12 07:49:39] 2025-10-12 11:48:42,248 | INFO     | zombie collector waiting for pid 15818
[2025-10-12 07:49:39] 2025-10-12 11:48:42,248 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:49:39] 2025-10-12 11:48:42,248 | INFO     | collected zombie processes
[2025-10-12 07:49:39] 2025-10-12 11:48:42,249 | INFO     | will attempt to kill all subprocesses of pid=15818
[2025-10-12 07:49:39] 2025-10-12 11:48:42,319 | INFO     | process IDs to be killed: [15818] (in reverse order)
[2025-10-12 07:49:39] 2025-10-12 11:48:42,381 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:49:39] 2025-10-12 11:48:42,381 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:49:39] 2025-10-12 11:48:42,385 | INFO     | did not find any defunct processes belonging to 15818
[2025-10-12 07:49:39] 2025-10-12 11:48:42,387 | INFO     | did not find any defunct processes belonging to 15818
[2025-10-12 07:49:39] 2025-10-12 11:48:42,387 | INFO     | ready for new job
[2025-10-12 07:49:39] 2025-10-12 11:48:42,387 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:49:39] 2025-10-12 11:48:42,389 | INFO     | ***************************************
[2025-10-12 07:49:39] 2025-10-12 11:48:42,389 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:49:39] 2025-10-12 11:48:42,389 | INFO     | ***************************************
[2025-10-12 07:49:39] 2025-10-12 11:48:42,389 | INFO     | 
[2025-10-12 07:49:39] 2025-10-12 11:48:42,390 | INFO     | architecture information:
[2025-10-12 07:49:39] 2025-10-12 11:48:42,390 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:49:39] 2025-10-12 11:48:42,410 | INFO     | cat /etc/os-release:
[2025-10-12 07:49:39] NAME="CentOS Linux"
[2025-10-12 07:49:39] VERSION="7 (Core)"
[2025-10-12 07:49:39] ID="centos"
[2025-10-12 07:49:39] ID_LIKE="rhel fedora"
[2025-10-12 07:49:39] VERSION_ID="7"
[2025-10-12 07:49:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:49:39] ANSI_COLOR="0;31"
[2025-10-12 07:49:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:49:39] HOME_URL="https://www.centos.org/"
[2025-10-12 07:49:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:49:39] 
[2025-10-12 07:49:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:49:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:49:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:49:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:49:39] 
[2025-10-12 07:49:39] 2025-10-12 11:48:42,410 | INFO     | ***************************************
[2025-10-12 07:49:39] 2025-10-12 11:48:42,914 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 07:49:39] 2025-10-12 11:48:42,935 | INFO     | sufficient remaining disk space (18580766720 B)
[2025-10-12 07:49:39] 2025-10-12 11:48:42,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:49:39] 2025-10-12 11:48:42,936 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:49:39] 2025-10-12 11:48:42,936 | INFO     | update_server=False
[2025-10-12 07:49:39] 2025-10-12 11:48:42,936 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:49:39] 2025-10-12 11:48:42,937 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:49:39] 2025-10-12 11:48:43,053 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:49:39] 2025-10-12 11:48:43,053 | INFO     | aborting loop
[2025-10-12 07:49:39] 2025-10-12 11:48:43,666 | INFO     | all data control threads have been joined
[2025-10-12 07:49:39] 2025-10-12 11:48:43,835 | INFO     | all payload control threads have been joined
[2025-10-12 07:49:39] 2025-10-12 11:48:43,942 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:49:39] 2025-10-12 11:48:43,942 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:49:39] 2025-10-12 11:48:44,058 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:49:39] 2025-10-12 11:48:44,165 | INFO     | all job control threads have been joined
[2025-10-12 07:49:39] 2025-10-12 11:48:44,311 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:49:39] 2025-10-12 11:48:44,397 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:49:39] 2025-10-12 11:48:44,442 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:49:39] 2025-10-12 11:48:44,671 | INFO     | [data] control thread has finished
[2025-10-12 07:49:39] 2025-10-12 11:48:44,709 | INFO     | [job] validate thread has finished
[2025-10-12 07:49:39] 2025-10-12 11:48:44,837 | INFO     | [payload] control thread has finished
[2025-10-12 07:49:39] 2025-10-12 11:48:44,907 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:49:39] 2025-10-12 11:48:44,933 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:49:39] 2025-10-12 11:48:44,941 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:49:39] 2025-10-12 11:48:44,984 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:49:39] 2025-10-12 11:48:45,031 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:49:39] 2025-10-12 11:48:45,171 | INFO     | [job] control thread has finished
[2025-10-12 07:49:39] 2025-10-12 11:48:45,198 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:49:39] 2025-10-12 11:48:46,316 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:49:39] 2025-10-12 11:48:48,403 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:49:39] 2025-10-12 11:49:13,042 | INFO     | PID=9348 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 07:49:39] 2025-10-12 11:49:13,043 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:49:39] 2025-10-12 11:49:13,043 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:49:39] 2025-10-12 11:49:13,043 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:49:39] 2025-10-12 11:49:31,992 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:49:39] 2025-10-12 11:49:33,862 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139820898740032)>', '<ExcThread(monitor, started 139820194043648)>']
[2025-10-12 07:49:39] 2025-10-12 11:49:34,151 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:49:39] 2025-10-12 11:49:34,151 | INFO     | [monitor] control thread has ended
[2025-10-12 07:49:39] 2025-10-12 11:49:38,876 | INFO     | all workflow threads have been joined
[2025-10-12 07:49:39] 2025-10-12 11:49:38,876 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:49:39] 2025-10-12 11:49:38,880 | INFO     | traces error code: 0
[2025-10-12 07:49:39] 2025-10-12 11:49:38,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:49:39] 2025-10-12 11:49:39,000 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:49:39] 2025-10-12 11:49:39,004 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:49:39] 2025-10-12 11:49:39,009 [wrapper] pilotpid: 9348
[2025-10-12 07:49:39] 2025-10-12 11:49:39,014 [wrapper] Pilot exit status: 0
[2025-10-12 07:49:39] 2025-10-12 11:49:39,034 [wrapper] pandaids: 6839242245
[2025-10-12 07:49:39] 2025-10-12 11:49:39,079 [wrapper] cleanup supervisor_pilot 15869 9349
[2025-10-12 07:49:39] 2025-10-12 11:49:39,083 [wrapper] Test setup, not cleaning
[2025-10-12 07:49:39] 2025-10-12 11:49:39,088 [wrapper] apfmon messages muted
[2025-10-12 07:49:39] 2025-10-12 11:49:39,092 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:49:39] 2025-10-12 11:49:39,096 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:49:39]  *** Error codes and diagnostics ***
[2025-10-12 07:49:39]     "exeErrorCode": 0,
[2025-10-12 07:49:39]     "exeErrorDiag": "",
[2025-10-12 07:49:39]     "pilotErrorCode": 0,
[2025-10-12 07:49:39]     "pilotErrorDiag": "",
[2025-10-12 07:49:39]  *** Listing of results directory ***
[2025-10-12 07:49:39] total 415760
[2025-10-12 07:49:39] -rw-r--r-- 1 boincer boincer    557409 Oct 11 21:26 pilot3.tar.gz
[2025-10-12 07:49:39] -rwx------ 1 boincer boincer     36292 Oct 11 21:50 runpilot2-wrapper.sh
[2025-10-12 07:49:39] -rw-r--r-- 1 boincer boincer      5112 Oct 11 21:50 queuedata.json
[2025-10-12 07:49:39] -rw-r--r-- 1 boincer boincer       100 Oct 12 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:49:39] -rwxr-xr-x 1 boincer boincer      7986 Oct 12 05:40 run_atlas
[2025-10-12 07:49:39] -rw-r--r-- 1 boincer boincer       105 Oct 12 05:40 job.xml
[2025-10-12 07:49:39] -rw-r--r-- 2 boincer boincer 223445868 Oct 12 05:41 EVNT.46676267._003164.pool.root.1
[2025-10-12 07:49:39] -rw-r--r-- 2 boincer boincer     15120 Oct 12 05:41 start_atlas.sh
[2025-10-12 07:49:39] drwxrwx--x 2 boincer boincer      4096 Oct 12 05:41 shared
[2025-10-12 07:49:39] -rw-r--r-- 2 boincer boincer    569676 Oct 12 05:41 input.tar.gz
[2025-10-12 07:49:39] -rw-r--r-- 1 boincer boincer         0 Oct 12 05:41 boinc_lockfile
[2025-10-12 07:49:39] -rw-r--r-- 1 boincer boincer      2550 Oct 12 05:41 pandaJob.out
[2025-10-12 07:49:39] -rw------- 1 boincer boincer    975536 Oct 12 05:41 agis_schedconf.cvmfs.json
[2025-10-12 07:49:39] -rw------- 1 boincer boincer   1560580 Oct 12 05:41 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:49:39] drwx------ 5 boincer boincer      4096 Oct 12 05:41 pilot3
[2025-10-12 07:49:39] -rw-r--r-- 1 boincer boincer      5909 Oct 12 07:47 init_data.xml
[2025-10-12 07:49:39] -rw------- 1 boincer boincer 195497266 Oct 12 07:47 HITS.46676269._068904.pool.root.1
[2025-10-12 07:49:39] -rw-r--r-- 1 boincer boincer       529 Oct 12 07:47 boinc_task_state.xml
[2025-10-12 07:49:39] -rw------- 1 boincer boincer      1053 Oct 12 07:48 memory_monitor_summary.json
[2025-10-12 07:49:39] -rw------- 1 boincer boincer    366884 Oct 12 07:48 log.46676269._068904.job.log.tgz.1
[2025-10-12 07:49:39] -rw------- 1 boincer boincer      7846 Oct 12 07:48 heartbeat.json
[2025-10-12 07:49:39] -rw------- 1 boincer boincer        95 Oct 12 07:49 pilot_heartbeat.json
[2025-10-12 07:49:39] -rw-r--r-- 1 boincer boincer        27 Oct 12 07:49 wrapper_checkpoint.txt
[2025-10-12 07:49:39] -rw-r--r-- 1 boincer boincer      8192 Oct 12 07:49 boinc_mmap_file
[2025-10-12 07:49:39] -rw------- 1 boincer boincer      4745 Oct 12 07:49 pilotlog.txt
[2025-10-12 07:49:39] -rw------- 1 boincer boincer   1081179 Oct 12 07:49 log.46676269._068904.job.log.1
[2025-10-12 07:49:39] -rw------- 1 boincer boincer       357 Oct 12 07:49 output.list
[2025-10-12 07:49:39] -rw-r--r-- 1 boincer boincer       620 Oct 12 07:49 runtime_log
[2025-10-12 07:49:39] -rw------- 1 boincer boincer   1464320 Oct 12 07:49 result.tar.gz
[2025-10-12 07:49:39] -rw-r--r-- 1 boincer boincer      8698 Oct 12 07:49 runtime_log.err
[2025-10-12 07:49:39] -rw------- 1 boincer boincer       659 Oct 12 07:49 0aeMDmRP0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBHiNDmwukCbm.diag
[2025-10-12 07:49:39] -rw-r--r-- 1 boincer boincer     21196 Oct 12 07:49 stderr.txt
[2025-10-12 07:49:39] HITS file was successfully produced:
[2025-10-12 07:49:39] -rw------- 1 boincer boincer 195497266 Oct 12 07:47 shared/HITS.pool.root.1
[2025-10-12 07:49:39]  *** Contents of shared directory: ***
[2025-10-12 07:49:39] total 411140
[2025-10-12 07:49:39] -rw-r--r-- 2 boincer boincer 223445868 Oct 12 05:41 ATLAS.root_0
[2025-10-12 07:49:39] -rw-r--r-- 2 boincer boincer     15120 Oct 12 05:41 start_atlas.sh
[2025-10-12 07:49:39] -rw-r--r-- 2 boincer boincer    569676 Oct 12 05:41 input.tar.gz
[2025-10-12 07:49:39] -rw------- 1 boincer boincer 195497266 Oct 12 07:47 HITS.pool.root.1
[2025-10-12 07:49:39] -rw------- 1 boincer boincer   1464320 Oct 12 07:49 result.tar.gz
07:49:40 (5610): run_atlas exited; CPU time 56415.664239
07:49:40 (5610): called boinc_finish(0)

</stderr_txt>
]]>

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