Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:46:39 (13032): wrapper (7.7.26015): starting
05:46:39 (13032): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 05:46:39] Arguments: --nthreads 12
[2025-10-12 05:46:39] Threads: 12
[2025-10-12 05:46:39] Checking for CVMFS
[2025-10-12 05:46:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:46:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:46:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:46:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:46:39] 2.11.2.0 3035 222674 97388 151615 0 57 14838584 20275200 1 130560 3 107999911 99.984 13646308 12610 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 05:46:39] CVMFS is ok
[2025-10-12 05:46:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:46:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:46:39] Further information can be found at the LHC@home message board.
[2025-10-12 05:46:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:46:39] Checking for apptainer binary...
[2025-10-12 05:46:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:46:39] Running /usr/bin/apptainer --version
[2025-10-12 05:46:39] apptainer version 1.3.2-1.el7
[2025-10-12 05:46:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:46:41] c-205-31.aglt2.org
[2025-10-12 05:46:41] apptainer works
[2025-10-12 05:46:41] Set ATHENA_PROC_NUMBER=12
[2025-10-12 05:46:41] Set ATHENA_CORE_NUMBER=12
[2025-10-12 05:46:41] Starting ATLAS job with PandaID=6839386685
[2025-10-12 05:46:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:02:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:02:28]  scope=mc23_13p6TeV
[2025-10-12 07:02:28]  status=None
[2025-10-12 07:02:28]  status_code=0
[2025-10-12 07:02:28]  storage_token=
[2025-10-12 07:02:28]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839386685/log.46676269._070981.job.log.tgz.1
[2025-10-12 07:02:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9e/55/log.46676269._070981.job.log.tgz.1
[2025-10-12 07:02:28]  workdir=None
[2025-10-12 07:02:28] ]
[2025-10-12 07:02:28] 2025-10-12 11:01:47,411 | INFO     | transferring file log.46676269._070981.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839386685/log.46676269._070981.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 07:02:28] 2025-10-12 11:01:47,411 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839386685/log.46676269._070981.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._070981.job
[2025-10-12 07:02:28] 2025-10-12 11:01:47,433 | INFO     | adding to output.list: log.46676269._070981.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9e/55/log.46676269._070981.job.log.tg
[2025-10-12 07:02:28] 2025-10-12 11:01:47,434 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 07:02:28] 2025-10-12 11:01:47,434 | INFO     | summary of transferred files:
[2025-10-12 07:02:28] 2025-10-12 11:01:47,434 | INFO     |  -- lfn=log.46676269._070981.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 07:02:28] 2025-10-12 11:01:47,435 | INFO     | stage-out finished correctly
[2025-10-12 07:02:28] 2025-10-12 11:01:48,628 | INFO     | time since job start (4493s) is within the limit (172800.0s)
[2025-10-12 07:02:28] 2025-10-12 11:01:49,257 | INFO     | monitor loop #335: job 0:6839386685 is in state 'finished'
[2025-10-12 07:02:28] 2025-10-12 11:01:49,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 07:02:28] 2025-10-12 11:01:49,928 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 07:02:28] 2025-10-12 11:01:50,529 | INFO     | job 6839386685 has state=finished
[2025-10-12 07:02:28] 2025-10-12 11:01:50,529 | INFO     | preparing for final server update for job 6839386685 in state='finished'
[2025-10-12 07:02:28] 2025-10-12 11:01:50,530 | INFO     | this job has now completed (state=finished)
[2025-10-12 07:02:28] 2025-10-12 11:01:50,530 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 07:02:28] 2025-10-12 11:01:50,530 | INFO     | log transfer has been attempted: DONE
[2025-10-12 07:02:28] 2025-10-12 11:01:50,530 | INFO     | job 6839386685 has finished - writing final server update
[2025-10-12 07:02:28] 2025-10-12 11:01:50,531 | INFO     | total number of processed events: 400 (read)
[2025-10-12 07:02:28] 2025-10-12 11:01:50,532 | INFO     | executing command: lscpu
[2025-10-12 07:02:28] 2025-10-12 11:01:50,557 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 07:02:28] 2025-10-12 11:01:50,634 | INFO     | time since job start (4495s) is within the limit (172800.0s)
[2025-10-12 07:02:28] 2025-10-12 11:01:51,761 | INFO     | monitor loop #336: job 0:6839386685 is in state 'finished'
[2025-10-12 07:02:28] 2025-10-12 11:01:51,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 07:02:28] 2025-10-12 11:01:52,640 | INFO     | time since job start (4497s) is within the limit (172800.0s)
[2025-10-12 07:02:28] 2025-10-12 11:01:53,188 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-12 07:02:28] 2025-10-12 11:01:54,264 | INFO     | monitor loop #337: job 0:6839386685 is in state 'finished'
[2025-10-12 07:02:28] 2025-10-12 11:01:54,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 07:02:28] 2025-10-12 11:01:54,645 | INFO     | time since job start (4499s) is within the limit (172800.0s)
[2025-10-12 07:02:28] 2025-10-12 11:01:55,275 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 07:02:28] 2025-10-12 11:01:55,279 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 07:02:28] 2025-10-12 11:01:55,281 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839386685/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 07:02:28] 2025-10-12 11:01:55,282 | INFO     | extracted standard info from prmon json
[2025-10-12 07:02:28] 2025-10-12 11:01:55,282 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 07:02:28] 2025-10-12 11:01:55,283 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 07:02:28] 2025-10-12 11:01:55,283 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 07:02:28] 2025-10-12 11:01:55,283 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 07:02:28] 2025-10-12 11:01:55,285 | INFO     | fitting pss+swap vs Time
[2025-10-12 07:02:28] 2025-10-12 11:01:55,285 | INFO     | sum of square deviations: 93240818.0
[2025-10-12 07:02:28] 2025-10-12 11:01:55,286 | INFO     | sum of deviations: -4148104187.9999995
[2025-10-12 07:02:28] 2025-10-12 11:01:55,286 | INFO     | mean x: 1760264763.0
[2025-10-12 07:02:28] 2025-10-12 11:01:55,286 | INFO     | mean y: 2713994.1641791044
[2025-10-12 07:02:28] 2025-10-12 11:01:55,286 | INFO     | -- intersect: 78313498820.06657
[2025-10-12 07:02:28] 2025-10-12 11:01:55,286 | INFO     | intersect: 78313498820.06657
[2025-10-12 07:02:28] 2025-10-12 11:01:55,286 | INFO     | chi2: 0.05530849856928303
[2025-10-12 07:02:28] 2025-10-12 11:01:55,286 | INFO     | -- intersect: 78313498820.06657
[2025-10-12 07:02:28] 2025-10-12 11:01:55,287 | INFO     | current memory leak: -44.49 B/s (using 67 data points, chi2=0.06)
[2025-10-12 07:02:28] 2025-10-12 11:01:55,287 | INFO     | could have reported an average CPU frequency of 2052 MHz (6 samples)
[2025-10-12 07:02:28] 2025-10-12 11:01:55,287 | INFO     | ..............................
[2025-10-12 07:02:28] 2025-10-12 11:01:55,287 | INFO     | . Timing measurements:
[2025-10-12 07:02:28] 2025-10-12 11:01:55,287 | INFO     | . get job = 0 s
[2025-10-12 07:02:28] 2025-10-12 11:01:55,287 | INFO     | . initial setup = 2 s
[2025-10-12 07:02:28] 2025-10-12 11:01:55,287 | INFO     | . payload setup = 7 s
[2025-10-12 07:02:28] 2025-10-12 11:01:55,287 | INFO     | . stage-in = 0 s
[2025-10-12 07:02:28] 2025-10-12 11:01:55,288 | INFO     | . payload execution = 4464 s
[2025-10-12 07:02:28] 2025-10-12 11:01:55,288 | INFO     | . stage-out = 0 s
[2025-10-12 07:02:28] 2025-10-12 11:01:55,288 | INFO     | . log creation = 0 s
[2025-10-12 07:02:28] 2025-10-12 11:01:55,288 | INFO     | ..............................
[2025-10-12 07:02:28] 2025-10-12 11:01:55,370 | INFO     | 
[2025-10-12 07:02:28] 2025-10-12 11:01:55,371 | INFO     | job summary report
[2025-10-12 07:02:28] 2025-10-12 11:01:55,371 | INFO     | --------------------------------------------------
[2025-10-12 07:02:28] 2025-10-12 11:01:55,371 | INFO     | PanDA job id: 6839386685
[2025-10-12 07:02:28] 2025-10-12 11:01:55,371 | INFO     | task id: 46676269
[2025-10-12 07:02:28] 2025-10-12 11:01:55,371 | INFO     | errors: (none)
[2025-10-12 07:02:28] 2025-10-12 11:01:55,371 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:02:28] 2025-10-12 11:01:55,372 | INFO     | pilot state: finished 
[2025-10-12 07:02:28] 2025-10-12 11:01:55,372 | INFO     | transexitcode: 0
[2025-10-12 07:02:28] 2025-10-12 11:01:55,372 | INFO     | exeerrorcode: 0
[2025-10-12 07:02:28] 2025-10-12 11:01:55,372 | INFO     | exeerrordiag: 
[2025-10-12 07:02:28] 2025-10-12 11:01:55,372 | INFO     | exitcode: 0
[2025-10-12 07:02:28] 2025-10-12 11:01:55,372 | INFO     | exitmsg: OK
[2025-10-12 07:02:28] 2025-10-12 11:01:55,372 | INFO     | cpuconsumptiontime: 48630 s
[2025-10-12 07:02:28] 2025-10-12 11:01:55,373 | INFO     | nevents: 400
[2025-10-12 07:02:28] 2025-10-12 11:01:55,373 | INFO     | neventsw: 0
[2025-10-12 07:02:28] 2025-10-12 11:01:55,373 | INFO     | pid: 23156
[2025-10-12 07:02:28] 2025-10-12 11:01:55,373 | INFO     | pgrp: 23156
[2025-10-12 07:02:28] 2025-10-12 11:01:55,373 | INFO     | corecount: 12
[2025-10-12 07:02:28] 2025-10-12 11:01:55,373 | INFO     | event service: False
[2025-10-12 07:02:28] 2025-10-12 11:01:55,374 | INFO     | sizes: {0: 2348857, 1: 2348885, 5: 2349147, 11: 2349203, 4474: 2375308, 4476: 2384306, 4478: 2384490, 4483: 2384684}
[2025-10-12 07:02:28] 2025-10-12 11:01:55,374 | INFO     | --------------------------------------------------
[2025-10-12 07:02:28] 2025-10-12 11:01:55,374 | INFO     | 
[2025-10-12 07:02:28] 2025-10-12 11:01:55,374 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 07:02:28] 2025-10-12 11:01:55,398 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,399 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,399 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,399 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,399 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,399 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,399 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,400 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,400 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,401 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,401 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,401 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,401 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,401 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:02:28] 2025-10-12 11:01:55,401 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,402 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:02:28] 2025-10-12 11:01:55,402 | INFO     | job 6839386685 has completed (purged errors)
[2025-10-12 07:02:28] 2025-10-12 11:01:55,402 | INFO     | overall cleanup function is called
[2025-10-12 07:02:28] 2025-10-12 11:01:56,410 | INFO     | --- collectZombieJob: --- 10, [23156]
[2025-10-12 07:02:28] 2025-10-12 11:01:56,410 | INFO     | zombie collector waiting for pid 23156
[2025-10-12 07:02:28] 2025-10-12 11:01:56,411 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:02:28] 2025-10-12 11:01:56,411 | INFO     | collected zombie processes
[2025-10-12 07:02:28] 2025-10-12 11:01:56,411 | INFO     | will attempt to kill all subprocesses of pid=23156
[2025-10-12 07:02:28] 2025-10-12 11:01:56,501 | INFO     | process IDs to be killed: [23156] (in reverse order)
[2025-10-12 07:02:28] 2025-10-12 11:01:56,553 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:02:28] 2025-10-12 11:01:56,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:02:28] 2025-10-12 11:01:56,556 | INFO     | did not find any defunct processes belonging to 23156
[2025-10-12 07:02:28] 2025-10-12 11:01:56,558 | INFO     | did not find any defunct processes belonging to 23156
[2025-10-12 07:02:28] 2025-10-12 11:01:56,558 | INFO     | ready for new job
[2025-10-12 07:02:28] 2025-10-12 11:01:56,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:02:28] 2025-10-12 11:01:56,560 | INFO     | ***************************************
[2025-10-12 07:02:28] 2025-10-12 11:01:56,560 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:02:28] 2025-10-12 11:01:56,560 | INFO     | ***************************************
[2025-10-12 07:02:28] 2025-10-12 11:01:56,560 | INFO     | 
[2025-10-12 07:02:28] 2025-10-12 11:01:56,560 | INFO     | architecture information:
[2025-10-12 07:02:28] 2025-10-12 11:01:56,561 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:02:28] 2025-10-12 11:01:56,576 | INFO     | cat /etc/os-release:
[2025-10-12 07:02:28] NAME="CentOS Linux"
[2025-10-12 07:02:28] VERSION="7 (Core)"
[2025-10-12 07:02:28] ID="centos"
[2025-10-12 07:02:28] ID_LIKE="rhel fedora"
[2025-10-12 07:02:28] VERSION_ID="7"
[2025-10-12 07:02:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:02:28] ANSI_COLOR="0;31"
[2025-10-12 07:02:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:02:28] HOME_URL="https://www.centos.org/"
[2025-10-12 07:02:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:02:28] 
[2025-10-12 07:02:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:02:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:02:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:02:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:02:28] 
[2025-10-12 07:02:28] 2025-10-12 11:01:56,576 | INFO     | ***************************************
[2025-10-12 07:02:28] 2025-10-12 11:01:57,079 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 07:02:28] 2025-10-12 11:01:57,097 | INFO     | sufficient remaining disk space (29365370880 B)
[2025-10-12 07:02:28] 2025-10-12 11:01:57,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:02:28] 2025-10-12 11:01:57,097 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:02:28] 2025-10-12 11:01:57,097 | INFO     | update_server=False
[2025-10-12 07:02:28] 2025-10-12 11:01:57,097 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:02:28] 2025-10-12 11:01:57,098 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:02:28] 2025-10-12 11:01:57,203 | INFO     | all data control threads have been joined
[2025-10-12 07:02:28] 2025-10-12 11:01:57,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:02:28] 2025-10-12 11:01:57,772 | INFO     | aborting loop
[2025-10-12 07:02:28] 2025-10-12 11:01:57,891 | INFO     | all payload control threads have been joined
[2025-10-12 07:02:28] 2025-10-12 11:01:58,033 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:02:28] 2025-10-12 11:01:58,103 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:02:28] 2025-10-12 11:01:58,104 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:02:28] 2025-10-12 11:01:58,209 | INFO     | [data] control thread has finished
[2025-10-12 07:02:28] 2025-10-12 11:01:58,461 | INFO     | all job control threads have been joined
[2025-10-12 07:02:28] 2025-10-12 11:01:58,628 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:02:28] 2025-10-12 11:01:58,668 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:02:28] 2025-10-12 11:01:58,777 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:02:28] 2025-10-12 11:01:58,897 | INFO     | [payload] control thread has finished
[2025-10-12 07:02:28] 2025-10-12 11:01:58,982 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:02:28] 2025-10-12 11:01:59,231 | INFO     | [job] validate thread has finished
[2025-10-12 07:02:28] 2025-10-12 11:01:59,351 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:02:28] 2025-10-12 11:01:59,466 | INFO     | [job] control thread has finished
[2025-10-12 07:02:28] 2025-10-12 11:01:59,479 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:02:28] 2025-10-12 11:01:59,481 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:02:28] 2025-10-12 11:02:00,039 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:02:28] 2025-10-12 11:02:00,517 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:02:28] 2025-10-12 11:02:02,368 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:02:28] 2025-10-12 11:02:04,523 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:02:28] 2025-10-12 11:02:07,226 | INFO     | job.realtimelogging is not enabled
[2025-10-12 07:02:28] 2025-10-12 11:02:08,231 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:02:28] 2025-10-12 11:02:09,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140461752121152)>', '<ExcThread(monitor, started 140461318592256)>']
[2025-10-12 07:02:28] 2025-10-12 11:02:14,169 | INFO     | all workflow threads have been joined
[2025-10-12 07:02:28] 2025-10-12 11:02:14,169 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:02:28] 2025-10-12 11:02:14,169 | INFO     | traces error code: 0
[2025-10-12 07:02:28] 2025-10-12 11:02:14,169 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:02:28] 2025-10-12 11:02:27,852 | INFO     | PID=16748 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 07:02:28] 2025-10-12 11:02:27,852 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:02:28] 2025-10-12 11:02:27,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:02:28] 2025-10-12 11:02:27,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:02:28] 2025-10-12 11:02:27,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:02:28] 2025-10-12 11:02:27,852 | INFO     | [monitor] control thread has ended
[2025-10-12 07:02:28] 2025-10-12 11:02:27,938 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:02:28] 2025-10-12 11:02:27,942 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:02:28] 2025-10-12 11:02:27,946 [wrapper] pilotpid: 16748
[2025-10-12 07:02:28] 2025-10-12 11:02:27,950 [wrapper] Pilot exit status: 0
[2025-10-12 07:02:28] 2025-10-12 11:02:27,966 [wrapper] pandaids: 6839386685
[2025-10-12 07:02:28] 2025-10-12 11:02:28,004 [wrapper] cleanup supervisor_pilot 26208 16749
[2025-10-12 07:02:28] 2025-10-12 11:02:28,008 [wrapper] Test setup, not cleaning
[2025-10-12 07:02:28] 2025-10-12 11:02:28,012 [wrapper] apfmon messages muted
[2025-10-12 07:02:28] 2025-10-12 11:02:28,016 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:02:28] 2025-10-12 11:02:28,020 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:02:28]  *** Error codes and diagnostics ***
[2025-10-12 07:02:28]     "exeErrorCode": 0,
[2025-10-12 07:02:28]     "exeErrorDiag": "",
[2025-10-12 07:02:28]     "pilotErrorCode": 0,
[2025-10-12 07:02:28]     "pilotErrorDiag": "",
[2025-10-12 07:02:28]  *** Listing of results directory ***
[2025-10-12 07:02:28] total 411088
[2025-10-12 07:02:28] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 00:11 pilot3.tar.gz
[2025-10-12 07:02:28] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 00:14 queuedata.json
[2025-10-12 07:02:28] -rwx------ 1 boincer umatlas     36292 Oct 12 00:15 runpilot2-wrapper.sh
[2025-10-12 07:02:28] -rw-r--r-- 1 boincer umatlas       100 Oct 12 05:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:02:28] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 05:46 run_atlas
[2025-10-12 07:02:28] -rw-r--r-- 1 boincer umatlas       105 Oct 12 05:46 job.xml
[2025-10-12 07:02:28] -rw-r--r-- 2 boincer umatlas 221371633 Oct 12 05:46 EVNT.46676267._003282.pool.root.1
[2025-10-12 07:02:28] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 05:46 start_atlas.sh
[2025-10-12 07:02:28] drwxrwx--x 2 boincer umatlas      4096 Oct 12 05:46 shared
[2025-10-12 07:02:28] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 05:46 input.tar.gz
[2025-10-12 07:02:28] -rw-r--r-- 1 boincer umatlas         0 Oct 12 05:46 boinc_lockfile
[2025-10-12 07:02:28] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 05:46 pandaJob.out
[2025-10-12 07:02:28] -rw------- 1 boincer umatlas    975536 Oct 12 05:46 agis_schedconf.cvmfs.json
[2025-10-12 07:02:28] -rw------- 1 boincer umatlas   1560580 Oct 12 05:46 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:02:28] drwx------ 5 boincer umatlas      4096 Oct 12 05:46 pilot3
[2025-10-12 07:02:28] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 06:57 init_data.xml
[2025-10-12 07:02:28] -rw------- 1 boincer umatlas 193627489 Oct 12 07:01 HITS.46676269._070981.pool.root.1
[2025-10-12 07:02:28] -rw-r--r-- 1 boincer umatlas       529 Oct 12 07:01 boinc_task_state.xml
[2025-10-12 07:02:28] -rw------- 1 boincer umatlas      1048 Oct 12 07:01 memory_monitor_summary.json
[2025-10-12 07:02:28] -rw------- 1 boincer umatlas    373659 Oct 12 07:01 log.46676269._070981.job.log.tgz.1
[2025-10-12 07:02:28] -rw------- 1 boincer umatlas      7855 Oct 12 07:01 heartbeat.json
[2025-10-12 07:02:28] -rw------- 1 boincer umatlas        95 Oct 12 07:01 pilot_heartbeat.json
[2025-10-12 07:02:28] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 07:02 boinc_mmap_file
[2025-10-12 07:02:28] -rw-r--r-- 1 boincer umatlas        27 Oct 12 07:02 wrapper_checkpoint.txt
[2025-10-12 07:02:28] -rw------- 1 boincer umatlas       745 Oct 12 07:02 pilotlog.txt
[2025-10-12 07:02:28] -rw------- 1 boincer umatlas    652090 Oct 12 07:02 log.46676269._070981.job.log.1
[2025-10-12 07:02:28] -rw------- 1 boincer umatlas       357 Oct 12 07:02 output.list
[2025-10-12 07:02:28] -rw-r--r-- 1 boincer umatlas       620 Oct 12 07:02 runtime_log
[2025-10-12 07:02:28] -rw------- 1 boincer umatlas   1044480 Oct 12 07:02 result.tar.gz
[2025-10-12 07:02:28] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 07:02 runtime_log.err
[2025-10-12 07:02:28] -rw------- 1 boincer umatlas       659 Oct 12 07:02 1FRKDmJf2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm1CTMDm2s45bn.diag
[2025-10-12 07:02:28] -rw-r--r-- 1 boincer umatlas     21895 Oct 12 07:02 stderr.txt
[2025-10-12 07:02:28] HITS file was successfully produced:
[2025-10-12 07:02:28] -rw------- 1 boincer umatlas 193627489 Oct 12 07:01 shared/HITS.pool.root.1
[2025-10-12 07:02:28]  *** Contents of shared directory: ***
[2025-10-12 07:02:28] total 406880
[2025-10-12 07:02:28] -rw-r--r-- 2 boincer umatlas 221371633 Oct 12 05:46 ATLAS.root_0
[2025-10-12 07:02:28] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 05:46 start_atlas.sh
[2025-10-12 07:02:28] -rw-r--r-- 2 boincer umatlas    569684 Oct 12 05:46 input.tar.gz
[2025-10-12 07:02:28] -rw------- 1 boincer umatlas 193627489 Oct 12 07:01 HITS.pool.root.1
[2025-10-12 07:02:28] -rw------- 1 boincer umatlas   1044480 Oct 12 07:02 result.tar.gz
07:02:29 (13032): run_atlas exited; CPU time 48607.819937
07:02:29 (13032): called boinc_finish(0)

</stderr_txt>
]]>

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