Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:47:22 (3150670): wrapper (7.7.26015): starting
20:47:22 (3150670): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 20:47:22] Arguments: --nthreads 3
[2025-10-12 20:47:22] Threads: 3
[2025-10-12 20:47:22] Checking for CVMFS
[2025-10-12 20:47:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:47:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:47:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:47:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:47:22] 2.9.2.0 1730677 4509 72664 151633 3 56 30641222 36864001 0 130560 0 3780324 99.991 162311 883 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 20:47:22] CVMFS is ok
[2025-10-12 20:47:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:47:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:47:22] Further information can be found at the LHC@home message board.
[2025-10-12 20:47:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:47:22] Checking for apptainer binary...
[2025-10-12 20:47:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:47:23] Running /usr/bin/apptainer --version
[2025-10-12 20:47:23] apptainer version 1.4.1-1.1
[2025-10-12 20:47:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:47:23] thA335
[2025-10-12 20:47:23] apptainer works
[2025-10-12 20:47:23] Set ATHENA_PROC_NUMBER=3
[2025-10-12 20:47:23] Set ATHENA_CORE_NUMBER=3
[2025-10-12 20:47:23] Starting ATLAS job with PandaID=6839387173
[2025-10-12 20:47:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:20:53]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:20:53] 2025-10-12 20:20:23,000 | INFO     | cat /etc/os-release:
[2025-10-12 22:20:53] NAME="CentOS Linux"
[2025-10-12 22:20:53] VERSION="7 (Core)"
[2025-10-12 22:20:53] ID="centos"
[2025-10-12 22:20:53] ID_LIKE="rhel fedora"
[2025-10-12 22:20:53] VERSION_ID="7"
[2025-10-12 22:20:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:20:53] ANSI_COLOR="0;31"
[2025-10-12 22:20:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:20:53] HOME_URL="https://www.centos.org/"
[2025-10-12 22:20:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:20:53] 
[2025-10-12 22:20:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:20:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:20:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:20:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:20:53] 
[2025-10-12 22:20:53] 2025-10-12 20:20:23,000 | INFO     | ***************************************
[2025-10-12 22:20:53] 2025-10-12 20:20:23,504 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 22:20:53] 2025-10-12 20:20:23,517 | INFO     | sufficient remaining disk space (830947196928 B)
[2025-10-12 22:20:53] 2025-10-12 20:20:23,517 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:20:53] 2025-10-12 20:20:23,517 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:20:53] 2025-10-12 20:20:23,517 | INFO     | update_server=False
[2025-10-12 22:20:53] 2025-10-12 20:20:23,517 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:20:53] 2025-10-12 20:20:23,517 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:20:53] 2025-10-12 20:20:23,517 | INFO     | aborting loop
[2025-10-12 22:20:53] 2025-10-12 20:20:23,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:20:53] 2025-10-12 20:20:23,596 | INFO     | all job control threads have been joined
[2025-10-12 22:20:53] 2025-10-12 20:20:23,692 | INFO     | all payload control threads have been joined
[2025-10-12 22:20:53] 2025-10-12 20:20:24,300 | INFO     | all data control threads have been joined
[2025-10-12 22:20:53] 2025-10-12 20:20:24,523 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:20:53] 2025-10-12 20:20:24,524 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:20:53] 2025-10-12 20:20:24,559 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:20:53] 2025-10-12 20:20:24,602 | INFO     | [job] control thread has finished
[2025-10-12 22:20:53] 2025-10-12 20:20:24,637 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:20:53] 2025-10-12 20:20:24,699 | INFO     | [payload] control thread has finished
[2025-10-12 22:20:53] 2025-10-12 20:20:24,915 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:20:53] 2025-10-12 20:20:25,198 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:20:53] 2025-10-12 20:20:25,306 | INFO     | [data] control thread has finished
[2025-10-12 22:20:53] 2025-10-12 20:20:25,450 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:20:53] 2025-10-12 20:20:25,523 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:20:53] 2025-10-12 20:20:25,605 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:20:53] 2025-10-12 20:20:25,693 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:20:53] 2025-10-12 20:20:25,746 | INFO     | [job] validate thread has finished
[2025-10-12 22:20:53] 2025-10-12 20:20:26,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:20:53] 2025-10-12 20:20:26,997 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:20:53] 2025-10-12 20:20:27,468 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:20:53] 2025-10-12 20:20:31,004 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:20:53] 2025-10-12 20:20:41,604 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:20:53] 2025-10-12 20:20:42,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140132476417856)>', '<ExcThread(monitor, started 140132116043520)>']
[2025-10-12 22:20:53] 2025-10-12 20:20:47,484 | INFO     | all workflow threads have been joined
[2025-10-12 22:20:53] 2025-10-12 20:20:47,485 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:20:53] 2025-10-12 20:20:47,486 | INFO     | traces error code: 0
[2025-10-12 22:20:53] 2025-10-12 20:20:47,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:20:53] 2025-10-12 20:20:53,041 | INFO     | PID=3154403 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:20:53] 2025-10-12 20:20:53,050 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:20:53] 2025-10-12 20:20:53,050 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:20:53] 2025-10-12 20:20:53,050 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:20:53] 2025-10-12 20:20:53,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:20:53] 2025-10-12 20:20:53,051 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 22:20:53] 2025-10-12 20:20:53,051 | INFO     | [monitor] control thread has ended
[2025-10-12 22:20:53] 2025-10-12 20:20:53,096 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:20:53] 2025-10-12 20:20:53,099 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:20:53] 2025-10-12 20:20:53,102 [wrapper] pilotpid: 3154403
[2025-10-12 22:20:53] 2025-10-12 20:20:53,105 [wrapper] Pilot exit status: 0
[2025-10-12 22:20:53] 2025-10-12 20:20:53,113 [wrapper] pandaids: 6839387173
[2025-10-12 22:20:53] 2025-10-12 20:20:53,129 [wrapper] cleanup supervisor_pilot 3174033 3154404
[2025-10-12 22:20:53] 2025-10-12 20:20:53,131 [wrapper] Test setup, not cleaning
[2025-10-12 22:20:53] 2025-10-12 20:20:53,134 [wrapper] apfmon messages muted
[2025-10-12 22:20:53] 2025-10-12 20:20:53,136 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:20:53] 2025-10-12 20:20:53,139 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:20:53]  *** Error codes and diagnostics ***
[2025-10-12 22:20:53]     "exeErrorCode": 0,
[2025-10-12 22:20:53]     "exeErrorDiag": "",
[2025-10-12 22:20:53]     "pilotErrorCode": 0,
[2025-10-12 22:20:53]     "pilotErrorDiag": "",
[2025-10-12 22:20:53]  *** Listing of results directory ***
[2025-10-12 22:20:53] total 414980
[2025-10-12 22:20:53] -rw-r--r-- 1 boinc boinc    557409 Oct 12 06:11 pilot3.tar.gz
[2025-10-12 22:20:53] -rw-r--r-- 1 boinc boinc      5112 Oct 12 06:14 queuedata.json
[2025-10-12 22:20:53] -rwx------ 1 boinc boinc     36292 Oct 12 06:15 runpilot2-wrapper.sh
[2025-10-12 22:20:53] -rw-r--r-- 1 boinc boinc       100 Oct 12 20:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:20:53] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 20:47 run_atlas
[2025-10-12 22:20:53] -rw-r--r-- 1 boinc boinc       105 Oct 12 20:47 job.xml
[2025-10-12 22:20:53] -rw-r--r-- 2 boinc boinc 223447132 Oct 12 20:47 EVNT.46676267._003288.pool.root.1
[2025-10-12 22:20:53] -rw-r--r-- 2 boinc boinc    569681 Oct 12 20:47 input.tar.gz
[2025-10-12 22:20:53] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:47 start_atlas.sh
[2025-10-12 22:20:53] drwxrwx--x 2 boinc boinc      4096 Oct 12 20:47 shared
[2025-10-12 22:20:53] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:47 boinc_setup_complete
[2025-10-12 22:20:53] -rw-r--r-- 1 boinc boinc      6195 Oct 12 20:47 init_data.xml
[2025-10-12 22:20:53] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:47 boinc_lockfile
[2025-10-12 22:20:53] -rw-r--r-- 1 boinc boinc      2550 Oct 12 20:47 pandaJob.out
[2025-10-12 22:20:53] -rw------- 1 boinc boinc    975528 Oct 12 20:47 agis_schedconf.cvmfs.json
[2025-10-12 22:20:53] -rw------- 1 boinc boinc   1560580 Oct 12 20:47 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:20:53] drwx------ 5 boinc boinc      4096 Oct 12 20:47 pilot3
[2025-10-12 22:20:53] -rw-r--r-- 1 boinc boinc       529 Oct 12 22:19 boinc_task_state.xml
[2025-10-12 22:20:53] -rw------- 1 boinc boinc 195469474 Oct 12 22:19 HITS.46676269._071104.pool.root.1
[2025-10-12 22:20:53] -rw------- 1 boinc boinc        95 Oct 12 22:20 pilot_heartbeat.json
[2025-10-12 22:20:53] -rw------- 1 boinc boinc      1018 Oct 12 22:20 memory_monitor_summary.json
[2025-10-12 22:20:53] -rw------- 1 boinc boinc    251807 Oct 12 22:20 log.46676269._071104.job.log.tgz.1
[2025-10-12 22:20:53] -rw------- 1 boinc boinc      7760 Oct 12 22:20 heartbeat.json
[2025-10-12 22:20:53] -rw-r--r-- 1 boinc boinc        27 Oct 12 22:20 wrapper_checkpoint.txt
[2025-10-12 22:20:53] -rw-r--r-- 1 boinc boinc      8192 Oct 12 22:20 boinc_mmap_file
[2025-10-12 22:20:53] -rw------- 1 boinc boinc       817 Oct 12 22:20 pilotlog.txt
[2025-10-12 22:20:53] -rw------- 1 boinc boinc    812286 Oct 12 22:20 log.46676269._071104.job.log.1
[2025-10-12 22:20:53] -rw------- 1 boinc boinc       357 Oct 12 22:20 output.list
[2025-10-12 22:20:53] -rw-r--r-- 1 boinc boinc       620 Oct 12 22:20 runtime_log
[2025-10-12 22:20:53] -rw------- 1 boinc boinc   1085440 Oct 12 22:20 result.tar.gz
[2025-10-12 22:20:53] -rw------- 1 boinc boinc       658 Oct 12 22:20 ys9MDmUf2R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8biNDmO2kyEo.diag
[2025-10-12 22:20:53] -rw-r--r-- 1 boinc boinc      8777 Oct 12 22:20 runtime_log.err
[2025-10-12 22:20:53] -rw-r--r-- 1 boinc boinc      8878 Oct 12 22:20 stderr.txt
[2025-10-12 22:20:53] HITS file was successfully produced:
[2025-10-12 22:20:53] -rw------- 1 boinc boinc 195469474 Oct 12 22:19 shared/HITS.pool.root.1
[2025-10-12 22:20:53]  *** Contents of shared directory: ***
[2025-10-12 22:20:53] total 410748
[2025-10-12 22:20:53] -rw-r--r-- 2 boinc boinc 223447132 Oct 12 20:47 ATLAS.root_0
[2025-10-12 22:20:53] -rw-r--r-- 2 boinc boinc    569681 Oct 12 20:47 input.tar.gz
[2025-10-12 22:20:53] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:47 start_atlas.sh
[2025-10-12 22:20:53] -rw------- 1 boinc boinc 195469474 Oct 12 22:19 HITS.pool.root.1
[2025-10-12 22:20:53] -rw------- 1 boinc boinc   1085440 Oct 12 22:20 result.tar.gz
22:20:55 (3150670): run_atlas exited; CPU time 15874.287081
22:20:55 (3150670): called boinc_finish(0)

</stderr_txt>
]]>

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