Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:39:00 (2018039): wrapper (7.7.26015): starting
21:39:00 (2018039): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 21:39:00] Arguments: --nthreads 3
[2025-10-12 21:39:00] Threads: 3
[2025-10-12 21:39:00] Checking for CVMFS
[2025-10-12 21:39:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:39:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:39:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:39:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:39:00] 2.9.2.0 570712 4708 84016 151635 3 57 30656815 36864000 0 130560 0 3812146 99.991 163973 949 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 21:39:00] CVMFS is ok
[2025-10-12 21:39:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:39:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:39:00] Further information can be found at the LHC@home message board.
[2025-10-12 21:39:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:39:00] Checking for apptainer binary...
[2025-10-12 21:39:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:39:00] Running /usr/bin/apptainer --version
[2025-10-12 21:39:00] apptainer version 1.4.1-1.1
[2025-10-12 21:39:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:39:00] magicA161a
[2025-10-12 21:39:00] apptainer works
[2025-10-12 21:39:00] Set ATHENA_PROC_NUMBER=3
[2025-10-12 21:39:00] Set ATHENA_CORE_NUMBER=3
[2025-10-12 21:39:00] Starting ATLAS job with PandaID=6839386627
[2025-10-12 21:39:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:00:27]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:00:27] 2025-10-12 20:59:55,956 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:00:27] 2025-10-12 20:59:55,964 | INFO     | cat /etc/os-release:
[2025-10-12 23:00:27] NAME="CentOS Linux"
[2025-10-12 23:00:27] VERSION="7 (Core)"
[2025-10-12 23:00:27] ID="centos"
[2025-10-12 23:00:27] ID_LIKE="rhel fedora"
[2025-10-12 23:00:27] VERSION_ID="7"
[2025-10-12 23:00:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:00:27] ANSI_COLOR="0;31"
[2025-10-12 23:00:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:00:27] HOME_URL="https://www.centos.org/"
[2025-10-12 23:00:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:00:27] 
[2025-10-12 23:00:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:00:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:00:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:00:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:00:27] 
[2025-10-12 23:00:27] 2025-10-12 20:59:55,964 | INFO     | ***************************************
[2025-10-12 23:00:27] 2025-10-12 20:59:56,467 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 23:00:27] 2025-10-12 20:59:56,479 | INFO     | sufficient remaining disk space (373993504768 B)
[2025-10-12 23:00:27] 2025-10-12 20:59:56,480 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:00:27] 2025-10-12 20:59:56,480 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:00:27] 2025-10-12 20:59:56,480 | INFO     | update_server=False
[2025-10-12 23:00:27] 2025-10-12 20:59:56,480 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:00:27] 2025-10-12 20:59:56,480 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:00:27] 2025-10-12 20:59:56,590 | INFO     | all payload control threads have been joined
[2025-10-12 23:00:27] 2025-10-12 20:59:56,913 | INFO     | all data control threads have been joined
[2025-10-12 23:00:27] 2025-10-12 20:59:57,064 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:00:27] 2025-10-12 20:59:57,064 | INFO     | aborting loop
[2025-10-12 23:00:27] 2025-10-12 20:59:57,485 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:00:27] 2025-10-12 20:59:57,485 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:00:27] 2025-10-12 20:59:57,557 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:00:27] 2025-10-12 20:59:57,596 | INFO     | [payload] control thread has finished
[2025-10-12 23:00:27] 2025-10-12 20:59:57,618 | INFO     | all job control threads have been joined
[2025-10-12 23:00:27] 2025-10-12 20:59:57,635 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:00:27] 2025-10-12 20:59:57,919 | INFO     | [data] control thread has finished
[2025-10-12 23:00:27] 2025-10-12 20:59:57,982 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:00:27] 2025-10-12 20:59:58,070 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:00:27] 2025-10-12 20:59:58,319 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:00:27] 2025-10-12 20:59:58,367 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:00:27] 2025-10-12 20:59:58,623 | INFO     | [job] control thread has finished
[2025-10-12 23:00:27] 2025-10-12 20:59:58,839 | INFO     | [job] validate thread has finished
[2025-10-12 23:00:27] 2025-10-12 20:59:58,980 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:00:27] 2025-10-12 20:59:59,026 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:00:27] 2025-10-12 20:59:59,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:00:27] 2025-10-12 20:59:59,988 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:00:27] 2025-10-12 21:00:03,159 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:00:27] 2025-10-12 21:00:06,840 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:00:27] 2025-10-12 21:00:07,845 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:00:27] 2025-10-12 21:00:11,228 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:00:27] 2025-10-12 21:00:12,292 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350339200832)>', '<ExcThread(monitor, started 140349850769152)>']
[2025-10-12 23:00:27] 2025-10-12 21:00:17,318 | INFO     | all workflow threads have been joined
[2025-10-12 23:00:27] 2025-10-12 21:00:17,318 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:00:27] 2025-10-12 21:00:17,318 | INFO     | traces error code: 0
[2025-10-12 23:00:27] 2025-10-12 21:00:17,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:00:27] 2025-10-12 21:00:26,950 | INFO     | PID=2021757 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:00:27] 2025-10-12 21:00:26,950 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:00:27] 2025-10-12 21:00:26,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:00:27] 2025-10-12 21:00:26,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:00:27] 2025-10-12 21:00:26,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:00:27] 2025-10-12 21:00:26,950 | INFO     | [monitor] control thread has ended
[2025-10-12 23:00:27] 2025-10-12 21:00:26,996 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:00:27] 2025-10-12 21:00:26,998 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:00:27] 2025-10-12 21:00:27,001 [wrapper] pilotpid: 2021757
[2025-10-12 23:00:27] 2025-10-12 21:00:27,003 [wrapper] Pilot exit status: 0
[2025-10-12 23:00:27] 2025-10-12 21:00:27,010 [wrapper] pandaids: 6839386627
[2025-10-12 23:00:27] 2025-10-12 21:00:27,025 [wrapper] cleanup supervisor_pilot 2040025 2021758
[2025-10-12 23:00:27] 2025-10-12 21:00:27,028 [wrapper] Test setup, not cleaning
[2025-10-12 23:00:27] 2025-10-12 21:00:27,030 [wrapper] apfmon messages muted
[2025-10-12 23:00:27] 2025-10-12 21:00:27,032 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:00:27] 2025-10-12 21:00:27,035 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:00:27]  *** Error codes and diagnostics ***
[2025-10-12 23:00:27]     "exeErrorCode": 0,
[2025-10-12 23:00:27]     "exeErrorDiag": "",
[2025-10-12 23:00:27]     "pilotErrorCode": 0,
[2025-10-12 23:00:27]     "pilotErrorDiag": "",
[2025-10-12 23:00:27]  *** Listing of results directory ***
[2025-10-12 23:00:27] total 418784
[2025-10-12 23:00:27] -rw-r--r-- 1 boinc boinc    557409 Oct 12 06:11 pilot3.tar.gz
[2025-10-12 23:00:27] -rw-r--r-- 1 boinc boinc      5112 Oct 12 06:14 queuedata.json
[2025-10-12 23:00:27] -rwx------ 1 boinc boinc     36292 Oct 12 06:15 runpilot2-wrapper.sh
[2025-10-12 23:00:27] -rw-r--r-- 1 boinc boinc       100 Oct 12 21:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:00:27] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 21:38 run_atlas
[2025-10-12 23:00:27] -rw-r--r-- 1 boinc boinc       105 Oct 12 21:38 job.xml
[2025-10-12 23:00:27] -rw-r--r-- 2 boinc boinc 221352683 Oct 12 21:39 EVNT.46676267._003264.pool.root.1
[2025-10-12 23:00:27] drwxrwx--x 2 boinc boinc      4096 Oct 12 21:39 shared
[2025-10-12 23:00:27] -rw-r--r-- 2 boinc boinc    569678 Oct 12 21:39 input.tar.gz
[2025-10-12 23:00:27] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:39 start_atlas.sh
[2025-10-12 23:00:27] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:39 boinc_setup_complete
[2025-10-12 23:00:27] -rw-r--r-- 1 boinc boinc      6448 Oct 12 21:39 init_data.xml
[2025-10-12 23:00:27] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:39 boinc_lockfile
[2025-10-12 23:00:27] -rw-r--r-- 1 boinc boinc      2550 Oct 12 21:39 pandaJob.out
[2025-10-12 23:00:27] -rw------- 1 boinc boinc    975536 Oct 12 21:39 agis_schedconf.cvmfs.json
[2025-10-12 23:00:27] -rw------- 1 boinc boinc   1560580 Oct 12 21:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:00:27] drwx------ 5 boinc boinc      4096 Oct 12 21:39 pilot3
[2025-10-12 23:00:27] -rw------- 1 boinc boinc 201635947 Oct 12 22:59 HITS.46676269._070923.pool.root.1
[2025-10-12 23:00:27] -rw------- 1 boinc boinc        95 Oct 12 22:59 pilot_heartbeat.json
[2025-10-12 23:00:27] -rw-r--r-- 1 boinc boinc       529 Oct 12 22:59 boinc_task_state.xml
[2025-10-12 23:00:27] -rw------- 1 boinc boinc      1017 Oct 12 22:59 memory_monitor_summary.json
[2025-10-12 23:00:27] -rw------- 1 boinc boinc    263991 Oct 12 22:59 log.46676269._070923.job.log.tgz.1
[2025-10-12 23:00:27] -rw------- 1 boinc boinc      7762 Oct 12 22:59 heartbeat.json
[2025-10-12 23:00:27] -rw-r--r-- 1 boinc boinc      8192 Oct 12 23:00 boinc_mmap_file
[2025-10-12 23:00:27] -rw-r--r-- 1 boinc boinc        27 Oct 12 23:00 wrapper_checkpoint.txt
[2025-10-12 23:00:27] -rw------- 1 boinc boinc       747 Oct 12 23:00 pilotlog.txt
[2025-10-12 23:00:27] -rw------- 1 boinc boinc    713858 Oct 12 23:00 log.46676269._070923.job.log.1
[2025-10-12 23:00:27] -rw------- 1 boinc boinc       357 Oct 12 23:00 output.list
[2025-10-12 23:00:27] -rw-r--r-- 1 boinc boinc       620 Oct 12 23:00 runtime_log
[2025-10-12 23:00:27] -rw------- 1 boinc boinc    993280 Oct 12 23:00 result.tar.gz
[2025-10-12 23:00:27] -rw-r--r-- 1 boinc boinc      8797 Oct 12 23:00 runtime_log.err
[2025-10-12 23:00:27] -rw------- 1 boinc boinc       662 Oct 12 23:00 3QTNDmIf2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmBCTMDmAMWkom.diag
[2025-10-12 23:00:27] -rw-r--r-- 1 boinc boinc      8981 Oct 12 23:00 stderr.txt
[2025-10-12 23:00:27] HITS file was successfully produced:
[2025-10-12 23:00:27] -rw------- 1 boinc boinc 201635947 Oct 12 22:59 shared/HITS.pool.root.1
[2025-10-12 23:00:27]  *** Contents of shared directory: ***
[2025-10-12 23:00:27] total 414636
[2025-10-12 23:00:27] -rw-r--r-- 2 boinc boinc 221352683 Oct 12 21:39 ATLAS.root_0
[2025-10-12 23:00:27] -rw-r--r-- 2 boinc boinc    569678 Oct 12 21:39 input.tar.gz
[2025-10-12 23:00:27] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:39 start_atlas.sh
[2025-10-12 23:00:27] -rw------- 1 boinc boinc 201635947 Oct 12 22:59 HITS.pool.root.1
[2025-10-12 23:00:27] -rw------- 1 boinc boinc    993280 Oct 12 23:00 result.tar.gz
23:00:28 (2018039): run_atlas exited; CPU time 13854.132806
23:00:28 (2018039): called boinc_finish(0)

</stderr_txt>
]]>

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