Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:33:07 (3258275): wrapper (7.7.26015): starting
21:33:07 (3258275): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 21:33:07] Arguments: --nthreads 3
[2025-10-12 21:33:07] Threads: 3
[2025-10-12 21:33:07] Checking for CVMFS
[2025-10-12 21:33:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:33:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:33:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:33:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:33:08] 2.9.2.0 1839474 4667 85992 151635 0 57 22922755 36864001 0 130560 0 3741863 99.991 162539 911 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 21:33:08] CVMFS is ok
[2025-10-12 21:33:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:33:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:33:08] Further information can be found at the LHC@home message board.
[2025-10-12 21:33:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:33:08] Checking for apptainer binary...
[2025-10-12 21:33:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:33:08] Running /usr/bin/apptainer --version
[2025-10-12 21:33:08] apptainer version 1.4.1-1.1
[2025-10-12 21:33:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:33:09] thA371b
[2025-10-12 21:33:09] apptainer works
[2025-10-12 21:33:09] Set ATHENA_PROC_NUMBER=3
[2025-10-12 21:33:09] Set ATHENA_CORE_NUMBER=3
[2025-10-12 21:33:09] Starting ATLAS job with PandaID=6839387099
[2025-10-12 21:33:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:53:25]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:53:25] 2025-10-12 20:52:21,523 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:53:25] 2025-10-12 20:52:21,523 | INFO     | aborting loop
[2025-10-12 22:53:25] 2025-10-12 20:52:21,573 | INFO     | all payload control threads have been joined
[2025-10-12 22:53:25] 2025-10-12 20:52:21,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:53:25] 2025-10-12 20:52:21,934 | INFO     | all data control threads have been joined
[2025-10-12 22:53:25] 2025-10-12 20:52:22,412 | INFO     | all job control threads have been joined
[2025-10-12 22:53:25] 2025-10-12 20:52:22,528 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:53:25] 2025-10-12 20:52:22,529 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:53:25] 2025-10-12 20:52:22,529 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:53:25] 2025-10-12 20:52:22,579 | INFO     | [payload] control thread has finished
[2025-10-12 22:53:25] 2025-10-12 20:52:22,579 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:53:25] 2025-10-12 20:52:22,591 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:53:25] 2025-10-12 20:52:22,940 | INFO     | [data] control thread has finished
[2025-10-12 22:53:25] 2025-10-12 20:52:23,215 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:53:25] 2025-10-12 20:52:23,417 | INFO     | [job] control thread has finished
[2025-10-12 22:53:25] 2025-10-12 20:52:23,418 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:53:25] 2025-10-12 20:52:23,621 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:53:25] 2025-10-12 20:52:23,806 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:53:25] 2025-10-12 20:52:23,982 | INFO     | [job] validate thread has finished
[2025-10-12 22:53:25] 2025-10-12 20:52:24,121 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:53:25] 2025-10-12 20:52:24,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:53:25] 2025-10-12 20:52:28,334 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:53:25] 2025-10-12 20:52:32,337 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:53:25] 2025-10-12 20:52:33,343 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:53:25] 2025-10-12 20:52:51,329 | INFO     | PID=3261996 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:53:25] 2025-10-12 20:52:51,330 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:53:25] 2025-10-12 20:52:51,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:53:25] 2025-10-12 20:52:51,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:53:25] 2025-10-12 20:53:20,065 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:53:25] 2025-10-12 20:53:20,122 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140294875957056)>', '<ExcThread(monitor, started 140294125233920)>']
[2025-10-12 22:53:25] 2025-10-12 20:53:20,473 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:53:25] 2025-10-12 20:53:20,473 | INFO     | [monitor] control thread has ended
[2025-10-12 22:53:25] 2025-10-12 20:53:25,148 | INFO     | all workflow threads have been joined
[2025-10-12 22:53:25] 2025-10-12 20:53:25,149 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:53:25] 2025-10-12 20:53:25,149 | INFO     | traces error code: 0
[2025-10-12 22:53:25] 2025-10-12 20:53:25,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:53:25] 2025-10-12 20:53:25,200 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:53:25] 2025-10-12 20:53:25,202 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:53:25] 2025-10-12 20:53:25,205 [wrapper] pilotpid: 3261996
[2025-10-12 22:53:25] 2025-10-12 20:53:25,207 [wrapper] Pilot exit status: 0
[2025-10-12 22:53:25] 2025-10-12 20:53:25,214 [wrapper] pandaids: 6839387099
[2025-10-12 22:53:25] 2025-10-12 20:53:25,230 [wrapper] cleanup supervisor_pilot 3280736 3261997
[2025-10-12 22:53:25] 2025-10-12 20:53:25,233 [wrapper] Test setup, not cleaning
[2025-10-12 22:53:25] 2025-10-12 20:53:25,235 [wrapper] apfmon messages muted
[2025-10-12 22:53:25] 2025-10-12 20:53:25,237 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:53:25] 2025-10-12 20:53:25,239 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:53:25]  *** Error codes and diagnostics ***
[2025-10-12 22:53:25]     "exeErrorCode": 0,
[2025-10-12 22:53:25]     "exeErrorDiag": "",
[2025-10-12 22:53:25]     "pilotErrorCode": 0,
[2025-10-12 22:53:25]     "pilotErrorDiag": "",
[2025-10-12 22:53:25]  *** Listing of results directory ***
[2025-10-12 22:53:25] total 413000
[2025-10-12 22:53:25] -rw-r--r-- 1 boinc boinc    557409 Oct 12 06:11 pilot3.tar.gz
[2025-10-12 22:53:25] -rw-r--r-- 1 boinc boinc      5112 Oct 12 06:14 queuedata.json
[2025-10-12 22:53:25] -rwx------ 1 boinc boinc     36292 Oct 12 06:15 runpilot2-wrapper.sh
[2025-10-12 22:53:25] -rw-r--r-- 1 boinc boinc       100 Oct 12 21:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:53:25] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 21:33 run_atlas
[2025-10-12 22:53:25] -rw-r--r-- 1 boinc boinc       105 Oct 12 21:33 job.xml
[2025-10-12 22:53:25] -rw-r--r-- 2 boinc boinc 220959647 Oct 12 21:33 EVNT.46676267._003284.pool.root.1
[2025-10-12 22:53:25] -rw-r--r-- 2 boinc boinc    569685 Oct 12 21:33 input.tar.gz
[2025-10-12 22:53:25] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:33 start_atlas.sh
[2025-10-12 22:53:25] drwxrwx--x 2 boinc boinc      4096 Oct 12 21:33 shared
[2025-10-12 22:53:25] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:33 boinc_setup_complete
[2025-10-12 22:53:25] -rw-r--r-- 1 boinc boinc      6440 Oct 12 21:33 init_data.xml
[2025-10-12 22:53:25] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:33 boinc_lockfile
[2025-10-12 22:53:25] -rw-r--r-- 1 boinc boinc      2551 Oct 12 21:33 pandaJob.out
[2025-10-12 22:53:25] -rw------- 1 boinc boinc    975536 Oct 12 21:33 agis_schedconf.cvmfs.json
[2025-10-12 22:53:25] -rw------- 1 boinc boinc   1560580 Oct 12 21:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:53:25] drwx------ 5 boinc boinc      4096 Oct 12 21:33 pilot3
[2025-10-12 22:53:25] -rw------- 1 boinc boinc 196181776 Oct 12 22:51 HITS.46676269._071030.pool.root.1
[2025-10-12 22:53:25] -rw-r--r-- 1 boinc boinc       529 Oct 12 22:51 boinc_task_state.xml
[2025-10-12 22:53:25] -rw------- 1 boinc boinc      1019 Oct 12 22:52 memory_monitor_summary.json
[2025-10-12 22:53:25] -rw------- 1 boinc boinc    240002 Oct 12 22:52 log.46676269._071030.job.log.tgz.1
[2025-10-12 22:53:25] -rw------- 1 boinc boinc      7769 Oct 12 22:52 heartbeat.json
[2025-10-12 22:53:25] -rw------- 1 boinc boinc        95 Oct 12 22:52 pilot_heartbeat.json
[2025-10-12 22:53:25] -rw-r--r-- 1 boinc boinc      8192 Oct 12 22:52 boinc_mmap_file
[2025-10-12 22:53:25] -rw-r--r-- 1 boinc boinc        27 Oct 12 22:52 wrapper_checkpoint.txt
[2025-10-12 22:53:25] -rw------- 1 boinc boinc      4824 Oct 12 22:53 pilotlog.txt
[2025-10-12 22:53:25] -rw------- 1 boinc boinc    699814 Oct 12 22:53 log.46676269._071030.job.log.1
[2025-10-12 22:53:25] -rw------- 1 boinc boinc       357 Oct 12 22:53 output.list
[2025-10-12 22:53:25] -rw-r--r-- 1 boinc boinc       620 Oct 12 22:53 runtime_log
[2025-10-12 22:53:25] -rw------- 1 boinc boinc    962560 Oct 12 22:53 result.tar.gz
[2025-10-12 22:53:25] -rw-r--r-- 1 boinc boinc      8782 Oct 12 22:53 runtime_log.err
[2025-10-12 22:53:25] -rw------- 1 boinc boinc       659 Oct 12 22:53 38CLDmJf2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVDTMDm1JkxSo.diag
[2025-10-12 22:53:25] -rw-r--r-- 1 boinc boinc      7162 Oct 12 22:53 stderr.txt
[2025-10-12 22:53:25] HITS file was successfully produced:
[2025-10-12 22:53:25] -rw------- 1 boinc boinc 196181776 Oct 12 22:51 shared/HITS.pool.root.1
[2025-10-12 22:53:25]  *** Contents of shared directory: ***
[2025-10-12 22:53:25] total 408892
[2025-10-12 22:53:25] -rw-r--r-- 2 boinc boinc 220959647 Oct 12 21:33 ATLAS.root_0
[2025-10-12 22:53:25] -rw-r--r-- 2 boinc boinc    569685 Oct 12 21:33 input.tar.gz
[2025-10-12 22:53:25] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:33 start_atlas.sh
[2025-10-12 22:53:25] -rw------- 1 boinc boinc 196181776 Oct 12 22:51 HITS.pool.root.1
[2025-10-12 22:53:25] -rw------- 1 boinc boinc    962560 Oct 12 22:53 result.tar.gz
22:53:27 (3258275): run_atlas exited; CPU time 13552.925196
22:53:27 (3258275): called boinc_finish(0)

</stderr_txt>
]]>

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