Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:15:54 (2755244): wrapper (7.7.26015): starting
02:15:54 (2755244): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 02:15:54] Arguments: --nthreads 3
[2025-10-13 02:15:54] Threads: 3
[2025-10-13 02:15:54] Checking for CVMFS
[2025-10-13 02:15:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:15:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:15:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:15:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:15:54] 2.9.2.0 193215 9382 86992 151641 2 57 4255443 36864000 12 130560 0 6739311 99.990 319340 847 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 02:15:54] CVMFS is ok
[2025-10-13 02:15:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:15:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:15:54] Further information can be found at the LHC@home message board.
[2025-10-13 02:15:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:15:54] Checking for apptainer binary...
[2025-10-13 02:15:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:15:54] Running /usr/bin/apptainer --version
[2025-10-13 02:15:54] apptainer version 1.4.1-1.1
[2025-10-13 02:15:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:15:54] thA383
[2025-10-13 02:15:54] apptainer works
[2025-10-13 02:15:54] Set ATHENA_PROC_NUMBER=3
[2025-10-13 02:15:54] Set ATHENA_CORE_NUMBER=3
[2025-10-13 02:15:54] Starting ATLAS job with PandaID=6839242173
[2025-10-13 02:15:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:41:10]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:41:10] 2025-10-13 01:40:20,322 | INFO     | [job] validate thread has finished
[2025-10-13 03:41:10] 2025-10-13 01:40:20,387 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:41:10] 2025-10-13 01:40:20,419 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:41:10] 2025-10-13 01:40:20,559 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:41:10] 2025-10-13 01:40:20,749 | INFO     | [data] control thread has finished
[2025-10-13 03:41:10] 2025-10-13 01:40:20,996 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:41:10] 2025-10-13 01:40:21,062 | INFO     | [job] control thread has finished
[2025-10-13 03:41:10] 2025-10-13 01:40:21,141 | INFO     | [payload] control thread has finished
[2025-10-13 03:41:10] 2025-10-13 01:40:21,823 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:41:10] 2025-10-13 01:40:24,311 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:41:10] 2025-10-13 01:40:48,506 | INFO     | PID=2758963 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:41:10] 2025-10-13 01:40:48,507 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:41:10] 2025-10-13 01:40:48,507 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:41:10] 2025-10-13 01:40:48,507 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:41:10] 2025-10-13 01:41:05,230 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:41:10] 2025-10-13 01:41:05,755 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139673217177408)>', '<ExcThread(monitor, started 139672596506368)>']
[2025-10-13 03:41:10] 2025-10-13 01:41:06,598 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:41:10] 2025-10-13 01:41:06,598 | INFO     | [monitor] control thread has ended
[2025-10-13 03:41:10] 2025-10-13 01:41:10,763 | INFO     | all workflow threads have been joined
[2025-10-13 03:41:10] 2025-10-13 01:41:10,763 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:41:10] 2025-10-13 01:41:10,764 | INFO     | traces error code: 0
[2025-10-13 03:41:10] 2025-10-13 01:41:10,764 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:41:10] 2025-10-13 01:41:10,814 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:41:10] 2025-10-13 01:41:10,816 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:41:10] 2025-10-13 01:41:10,818 [wrapper] pilotpid: 2758963
[2025-10-13 03:41:10] 2025-10-13 01:41:10,821 [wrapper] Pilot exit status: 0
[2025-10-13 03:41:10] 2025-10-13 01:41:10,828 [wrapper] pandaids: 6839242173
[2025-10-13 03:41:10] 2025-10-13 01:41:10,844 [wrapper] cleanup supervisor_pilot 2777199 2758964
[2025-10-13 03:41:10] 2025-10-13 01:41:10,846 [wrapper] Test setup, not cleaning
[2025-10-13 03:41:10] 2025-10-13 01:41:10,849 [wrapper] apfmon messages muted
[2025-10-13 03:41:10] 2025-10-13 01:41:10,851 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:41:10] 2025-10-13 01:41:10,853 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:41:10]  *** Error codes and diagnostics ***
[2025-10-13 03:41:10]     "exeErrorCode": 0,
[2025-10-13 03:41:10]     "exeErrorDiag": "",
[2025-10-13 03:41:10]     "pilotErrorCode": 0,
[2025-10-13 03:41:10]     "pilotErrorDiag": "",
[2025-10-13 03:41:10]  *** Listing of results directory ***
[2025-10-13 03:41:10] total 416240
[2025-10-13 03:41:10] -rw-r--r-- 1 boinc boinc    557409 Oct 12 03:26 pilot3.tar.gz
[2025-10-13 03:41:10] -rw-r--r-- 1 boinc boinc      5112 Oct 12 03:43 queuedata.json
[2025-10-13 03:41:10] -rwx------ 1 boinc boinc     36292 Oct 12 03:43 runpilot2-wrapper.sh
[2025-10-13 03:41:10] -rw-r--r-- 1 boinc boinc       100 Oct 13 02:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:41:10] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 02:15 run_atlas
[2025-10-13 03:41:10] -rw-r--r-- 1 boinc boinc       105 Oct 13 02:15 job.xml
[2025-10-13 03:41:10] -rw-r--r-- 2 boinc boinc 221196056 Oct 13 02:15 EVNT.46676267._003161.pool.root.1
[2025-10-13 03:41:10] -rw-r--r-- 2 boinc boinc    569675 Oct 13 02:15 input.tar.gz
[2025-10-13 03:41:10] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:15 start_atlas.sh
[2025-10-13 03:41:10] drwxrwx--x 2 boinc boinc      4096 Oct 13 02:15 shared
[2025-10-13 03:41:10] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:15 boinc_setup_complete
[2025-10-13 03:41:10] -rw-r--r-- 1 boinc boinc      6437 Oct 13 02:15 init_data.xml
[2025-10-13 03:41:10] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:15 boinc_lockfile
[2025-10-13 03:41:10] -rw-r--r-- 1 boinc boinc      2550 Oct 13 02:15 pandaJob.out
[2025-10-13 03:41:10] -rw------- 1 boinc boinc    975603 Oct 13 02:15 agis_schedconf.cvmfs.json
[2025-10-13 03:41:10] -rw------- 1 boinc boinc   1560580 Oct 13 02:15 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:41:10] drwx------ 5 boinc boinc      4096 Oct 13 02:16 pilot3
[2025-10-13 03:41:10] -rw------- 1 boinc boinc 199152162 Oct 13 03:39 HITS.46676269._068832.pool.root.1
[2025-10-13 03:41:10] -rw-r--r-- 1 boinc boinc       529 Oct 13 03:39 boinc_task_state.xml
[2025-10-13 03:41:10] -rw------- 1 boinc boinc      1022 Oct 13 03:40 memory_monitor_summary.json
[2025-10-13 03:41:10] -rw------- 1 boinc boinc    253828 Oct 13 03:40 log.46676269._068832.job.log.tgz.1
[2025-10-13 03:41:10] -rw------- 1 boinc boinc      7764 Oct 13 03:40 heartbeat.json
[2025-10-13 03:41:10] -rw------- 1 boinc boinc        95 Oct 13 03:40 pilot_heartbeat.json
[2025-10-13 03:41:10] -rw-r--r-- 1 boinc boinc        27 Oct 13 03:41 wrapper_checkpoint.txt
[2025-10-13 03:41:10] -rw-r--r-- 1 boinc boinc      8192 Oct 13 03:41 boinc_mmap_file
[2025-10-13 03:41:10] -rw------- 1 boinc boinc      4938 Oct 13 03:41 pilotlog.txt
[2025-10-13 03:41:10] -rw------- 1 boinc boinc    741986 Oct 13 03:41 log.46676269._068832.job.log.1
[2025-10-13 03:41:10] -rw------- 1 boinc boinc       357 Oct 13 03:41 output.list
[2025-10-13 03:41:10] -rw-r--r-- 1 boinc boinc       620 Oct 13 03:41 runtime_log
[2025-10-13 03:41:10] -rw------- 1 boinc boinc   1013760 Oct 13 03:41 result.tar.gz
[2025-10-13 03:41:10] -rw-r--r-- 1 boinc boinc      8777 Oct 13 03:41 runtime_log.err
[2025-10-13 03:41:10] -rw------- 1 boinc boinc       658 Oct 13 03:41 SAQLDm0I0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDGiNDm8McpJo.diag
[2025-10-13 03:41:10] -rw-r--r-- 1 boinc boinc      5705 Oct 13 03:41 stderr.txt
[2025-10-13 03:41:10] HITS file was successfully produced:
[2025-10-13 03:41:10] -rw------- 1 boinc boinc 199152162 Oct 13 03:39 shared/HITS.pool.root.1
[2025-10-13 03:41:10]  *** Contents of shared directory: ***
[2025-10-13 03:41:10] total 412076
[2025-10-13 03:41:10] -rw-r--r-- 2 boinc boinc 221196056 Oct 13 02:15 ATLAS.root_0
[2025-10-13 03:41:10] -rw-r--r-- 2 boinc boinc    569675 Oct 13 02:15 input.tar.gz
[2025-10-13 03:41:10] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:15 start_atlas.sh
[2025-10-13 03:41:10] -rw------- 1 boinc boinc 199152162 Oct 13 03:39 HITS.pool.root.1
[2025-10-13 03:41:10] -rw------- 1 boinc boinc   1013760 Oct 13 03:41 result.tar.gz
03:41:12 (2755244): run_atlas exited; CPU time 14560.505417
03:41:12 (2755244): called boinc_finish(0)

</stderr_txt>
]]>

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