Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:59:48 (3124511): wrapper (7.7.26015): starting
19:59:48 (3124511): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 19:59:48] Arguments: --nthreads 3
[2025-10-12 19:59:48] Threads: 3
[2025-10-12 19:59:48] Checking for CVMFS
[2025-10-12 19:59:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:59:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:59:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:59:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:59:48] 2.9.2.0 1694695 4680 82116 151630 3 57 29971839 36864000 0 130560 0 3747199 99.991 162676 1031 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 19:59:48] CVMFS is ok
[2025-10-12 19:59:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:59:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:59:48] Further information can be found at the LHC@home message board.
[2025-10-12 19:59:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:59:48] Checking for apptainer binary...
[2025-10-12 19:59:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:59:48] Running /usr/bin/apptainer --version
[2025-10-12 19:59:48] apptainer version 1.4.1-1.1
[2025-10-12 19:59:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:59:48] thA312a
[2025-10-12 19:59:48] apptainer works
[2025-10-12 19:59:48] Set ATHENA_PROC_NUMBER=3
[2025-10-12 19:59:48] Set ATHENA_CORE_NUMBER=3
[2025-10-12 19:59:48] Starting ATLAS job with PandaID=6839658274
[2025-10-12 19:59:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 21:19:06]  *** The last 200 lines of the pilot log: ***
[2025-10-12 21:19:06] 2025-10-12 19:18:07,464 | INFO     | [job] retrieve thread has finished
[2025-10-12 21:19:06] 2025-10-12 19:18:07,504 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 21:19:06] 2025-10-12 19:18:07,681 | INFO     | [payload] failed_post thread has finished
[2025-10-12 21:19:06] 2025-10-12 19:18:07,702 | INFO     | [job] job monitor thread has finished
[2025-10-12 21:19:06] 2025-10-12 19:18:07,721 | INFO     | [job] control thread has finished
[2025-10-12 21:19:06] 2025-10-12 19:18:07,959 | INFO     | all payload control threads have been joined
[2025-10-12 21:19:06] 2025-10-12 19:18:08,204 | INFO     | [data] control thread has finished
[2025-10-12 21:19:06] 2025-10-12 19:18:08,213 | INFO     | [payload] validate_post thread has finished
[2025-10-12 21:19:06] 2025-10-12 19:18:08,268 | INFO     | [data] copytool_in thread has finished
[2025-10-12 21:19:06] 2025-10-12 19:18:08,544 | INFO     | [job] validate thread has finished
[2025-10-12 21:19:06] 2025-10-12 19:18:08,653 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 21:19:06] 2025-10-12 19:18:08,660 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 21:19:06] 2025-10-12 19:18:08,844 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 21:19:06] 2025-10-12 19:18:08,965 | INFO     | [payload] control thread has finished
[2025-10-12 21:19:06] 2025-10-12 19:18:09,510 | INFO     | [data] copytool_out thread has finished
[2025-10-12 21:19:06] 2025-10-12 19:18:10,466 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 21:19:06] 2025-10-12 19:18:16,608 | INFO     | job.realtimelogging is not enabled
[2025-10-12 21:19:06] 2025-10-12 19:18:17,614 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 21:19:06] 2025-10-12 19:18:37,540 | INFO     | PID=3128230 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 21:19:06] 2025-10-12 19:18:37,540 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 21:19:06] 2025-10-12 19:18:37,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 21:19:06] 2025-10-12 19:18:37,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 21:19:06] 2025-10-12 19:18:59,375 | INFO     | [monitor] cgroup control has ended
[2025-10-12 21:19:06] 2025-10-12 19:19:00,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140391191926592)>', '<ExcThread(monitor, started 140390820714240)>']
[2025-10-12 21:19:06] 2025-10-12 19:19:01,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 21:19:06] 2025-10-12 19:19:01,663 | INFO     | [monitor] control thread has ended
[2025-10-12 21:19:06] 2025-10-12 19:19:05,868 | INFO     | all workflow threads have been joined
[2025-10-12 21:19:06] 2025-10-12 19:19:05,869 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 21:19:06] 2025-10-12 19:19:05,869 | INFO     | traces error code: 0
[2025-10-12 21:19:06] 2025-10-12 19:19:05,869 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 21:19:06] 2025-10-12 19:19:05,920 [wrapper] ==== pilot stdout END ====
[2025-10-12 21:19:06] 2025-10-12 19:19:05,923 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 21:19:06] 2025-10-12 19:19:05,925 [wrapper] pilotpid: 3128230
[2025-10-12 21:19:06] 2025-10-12 19:19:05,928 [wrapper] Pilot exit status: 0
[2025-10-12 21:19:06] 2025-10-12 19:19:05,935 [wrapper] pandaids: 6839658274
[2025-10-12 21:19:06] 2025-10-12 19:19:05,953 [wrapper] cleanup supervisor_pilot 3146519 3128231
[2025-10-12 21:19:06] 2025-10-12 19:19:05,956 [wrapper] Test setup, not cleaning
[2025-10-12 21:19:06] 2025-10-12 19:19:05,959 [wrapper] apfmon messages muted
[2025-10-12 21:19:06] 2025-10-12 19:19:05,961 [wrapper] ==== wrapper stdout END ====
[2025-10-12 21:19:06] 2025-10-12 19:19:05,963 [wrapper] ==== wrapper stderr END ====
[2025-10-12 21:19:06]  *** Error codes and diagnostics ***
[2025-10-12 21:19:06]     "exeErrorCode": 0,
[2025-10-12 21:19:06]     "exeErrorDiag": "",
[2025-10-12 21:19:06]     "pilotErrorCode": 0,
[2025-10-12 21:19:06]     "pilotErrorDiag": "",
[2025-10-12 21:19:06]  *** Listing of results directory ***
[2025-10-12 21:19:06] total 408576
[2025-10-12 21:19:06] -rw-r--r-- 1 boinc boinc    557409 Oct 12 08:54 pilot3.tar.gz
[2025-10-12 21:19:06] -rwx------ 1 boinc boinc     36292 Oct 12 09:17 runpilot2-wrapper.sh
[2025-10-12 21:19:06] -rw-r--r-- 1 boinc boinc      5112 Oct 12 09:17 queuedata.json
[2025-10-12 21:19:06] -rw-r--r-- 1 boinc boinc       100 Oct 12 19:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 21:19:06] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 19:59 run_atlas
[2025-10-12 21:19:06] -rw-r--r-- 1 boinc boinc       105 Oct 12 19:59 job.xml
[2025-10-12 21:19:06] -rw-r--r-- 2 boinc boinc 222575902 Oct 12 19:59 EVNT.46676267._003496.pool.root.1
[2025-10-12 21:19:06] -rw-r--r-- 2 boinc boinc    569677 Oct 12 19:59 input.tar.gz
[2025-10-12 21:19:06] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:59 start_atlas.sh
[2025-10-12 21:19:06] drwxrwx--x 2 boinc boinc      4096 Oct 12 19:59 shared
[2025-10-12 21:19:06] -rw-r--r-- 1 boinc boinc         0 Oct 12 19:59 boinc_setup_complete
[2025-10-12 21:19:06] -rw-r--r-- 1 boinc boinc      6447 Oct 12 19:59 init_data.xml
[2025-10-12 21:19:06] -rw-r--r-- 1 boinc boinc         0 Oct 12 19:59 boinc_lockfile
[2025-10-12 21:19:06] -rw-r--r-- 1 boinc boinc      2550 Oct 12 19:59 pandaJob.out
[2025-10-12 21:19:06] -rw------- 1 boinc boinc    975528 Oct 12 19:59 agis_schedconf.cvmfs.json
[2025-10-12 21:19:06] -rw------- 1 boinc boinc   1560580 Oct 12 19:59 agis_ddmendpoints.agis.ALL.json
[2025-10-12 21:19:06] drwx------ 5 boinc boinc      4096 Oct 12 19:59 pilot3
[2025-10-12 21:19:06] -rw------- 1 boinc boinc 190027808 Oct 12 21:17 HITS.46676269._073431.pool.root.1
[2025-10-12 21:19:06] -rw-r--r-- 1 boinc boinc       529 Oct 12 21:17 boinc_task_state.xml
[2025-10-12 21:19:06] -rw------- 1 boinc boinc      1030 Oct 12 21:17 memory_monitor_summary.json
[2025-10-12 21:19:06] -rw------- 1 boinc boinc    256081 Oct 12 21:17 log.46676269._073431.job.log.tgz.1
[2025-10-12 21:19:06] -rw------- 1 boinc boinc      7751 Oct 12 21:18 heartbeat.json
[2025-10-12 21:19:06] -rw------- 1 boinc boinc        95 Oct 12 21:18 pilot_heartbeat.json
[2025-10-12 21:19:06] -rw-r--r-- 1 boinc boinc      8192 Oct 12 21:18 boinc_mmap_file
[2025-10-12 21:19:06] -rw-r--r-- 1 boinc boinc        27 Oct 12 21:18 wrapper_checkpoint.txt
[2025-10-12 21:19:06] -rw------- 1 boinc boinc      4824 Oct 12 21:19 pilotlog.txt
[2025-10-12 21:19:06] -rw------- 1 boinc boinc    692159 Oct 12 21:19 log.46676269._073431.job.log.1
[2025-10-12 21:19:06] -rw------- 1 boinc boinc       357 Oct 12 21:19 output.list
[2025-10-12 21:19:06] -rw-r--r-- 1 boinc boinc       620 Oct 12 21:19 runtime_log
[2025-10-12 21:19:06] -rw------- 1 boinc boinc    962560 Oct 12 21:19 result.tar.gz
[2025-10-12 21:19:06] -rw-r--r-- 1 boinc boinc      8782 Oct 12 21:19 runtime_log.err
[2025-10-12 21:19:06] -rw------- 1 boinc boinc       659 Oct 12 21:19 i92MDmmV5R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhQTMDm7EOAVm.diag
[2025-10-12 21:19:06] -rw-r--r-- 1 boinc boinc      6528 Oct 12 21:19 stderr.txt
[2025-10-12 21:19:06] HITS file was successfully produced:
[2025-10-12 21:19:06] -rw------- 1 boinc boinc 190027808 Oct 12 21:17 shared/HITS.pool.root.1
[2025-10-12 21:19:06]  *** Contents of shared directory: ***
[2025-10-12 21:19:06] total 404460
[2025-10-12 21:19:06] -rw-r--r-- 2 boinc boinc 222575902 Oct 12 19:59 ATLAS.root_0
[2025-10-12 21:19:06] -rw-r--r-- 2 boinc boinc    569677 Oct 12 19:59 input.tar.gz
[2025-10-12 21:19:06] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:59 start_atlas.sh
[2025-10-12 21:19:06] -rw------- 1 boinc boinc 190027808 Oct 12 21:17 HITS.pool.root.1
[2025-10-12 21:19:06] -rw------- 1 boinc boinc    962560 Oct 12 21:19 result.tar.gz
21:19:07 (3124511): run_atlas exited; CPU time 13386.002267
21:19:07 (3124511): called boinc_finish(0)

</stderr_txt>
]]>

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