Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:04:29 (661188): wrapper (7.7.26015): starting
06:04:29 (661188): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 06:04:29] Arguments: --nthreads 8
[2025-10-12 06:04:29] Threads: 8
[2025-10-12 06:04:29] Checking for CVMFS
[2025-10-12 06:04:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:04:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:04:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:04:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:04:30] 2.13.2.0 5068 5536 144632 151615 2 616 23927990 40960000 27742 16776704 0 20954326 99.779 13574807 37524 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 06:04:30] CVMFS is ok
[2025-10-12 06:04:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:04:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:04:30] Further information can be found at the LHC@home message board.
[2025-10-12 06:04:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:04:30] Checking for apptainer binary...
[2025-10-12 06:04:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:04:30] Running /usr/bin/apptainer --version
[2025-10-12 06:04:30] apptainer version 1.4.3-1.el9
[2025-10-12 06:04:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:04:31] c-212-15.aglt2.org
[2025-10-12 06:04:31] apptainer works
[2025-10-12 06:04:31] Set ATHENA_PROC_NUMBER=8
[2025-10-12 06:04:31] Set ATHENA_CORE_NUMBER=8
[2025-10-12 06:04:31] Starting ATLAS job with PandaID=6839387439
[2025-10-12 06:04:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:23:04]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:23:04] 2025-10-12 16:22:12,679 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:23:04] 2025-10-12 16:22:12,679 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:23:04] 2025-10-12 16:22:12,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:23:04] 2025-10-12 16:22:12,689 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:23:04] 2025-10-12 16:22:12,689 | INFO     | sum of square deviations: 15706667982.52972
[2025-10-12 12:23:04] 2025-10-12 16:22:12,712 | INFO     | sum of deviations: 115507866056.63788
[2025-10-12 12:23:04] 2025-10-12 16:22:12,712 | INFO     | mean x: 1760274832.627027
[2025-10-12 12:23:04] 2025-10-12 16:22:12,712 | INFO     | mean y: 2464823.8162162164
[2025-10-12 12:23:04] 2025-10-12 16:22:12,712 | INFO     | -- intersect: -12942711697.14349
[2025-10-12 12:23:04] 2025-10-12 16:22:12,712 | INFO     | intersect: -12942711697.14349
[2025-10-12 12:23:04] 2025-10-12 16:22:12,713 | INFO     | chi2: 2.480394212962468
[2025-10-12 12:23:04] 2025-10-12 16:22:12,713 | INFO     | sum of square deviations: 15078493794.947834
[2025-10-12 12:23:04] 2025-10-12 16:22:12,751 | INFO     | sum of deviations: 138142086640.31213
[2025-10-12 12:23:04] 2025-10-12 16:22:12,752 | INFO     | mean x: 1760274680.128767
[2025-10-12 12:23:04] 2025-10-12 16:22:12,752 | INFO     | mean y: 2470252.2273972603
[2025-10-12 12:23:04] 2025-10-12 16:22:12,752 | INFO     | -- intersect: -16124340600.363937
[2025-10-12 12:23:04] 2025-10-12 16:22:12,752 | INFO     | intersect: -16124340600.363937
[2025-10-12 12:23:04] 2025-10-12 16:22:12,752 | INFO     | chi2: 1.6760310275549466
[2025-10-12 12:23:04] 2025-10-12 16:22:12,753 | INFO     | current chi2=1.6760310275549466 (change=32.42884462493675 %)
[2025-10-12 12:23:04] 2025-10-12 16:22:12,753 | INFO     | sum of square deviations: 14467296669.86385
[2025-10-12 12:23:04] 2025-10-12 16:22:12,764 | INFO     | sum of deviations: 135593490561.87505
[2025-10-12 12:23:04] 2025-10-12 16:22:12,764 | INFO     | mean x: 1760274527.6305556
[2025-10-12 12:23:04] 2025-10-12 16:22:12,764 | INFO     | mean y: 2469616.375
[2025-10-12 12:23:04] 2025-10-12 16:22:12,764 | INFO     | -- intersect: -16495551610.062532
[2025-10-12 12:23:04] 2025-10-12 16:22:12,765 | INFO     | intersect: -16495551610.062532
[2025-10-12 12:23:04] 2025-10-12 16:22:12,765 | INFO     | chi2: 1.6752436706149578
[2025-10-12 12:23:04] 2025-10-12 16:22:12,765 | INFO     | current chi2=1.6752436706149578 (change=0.046977468020827425 %)
[2025-10-12 12:23:04] 2025-10-12 16:22:12,765 | INFO     | right removable region: 359
[2025-10-12 12:23:04] 2025-10-12 16:22:12,770 | INFO     | sum of square deviations: 15078465124.947834
[2025-10-12 12:23:04] 2025-10-12 16:22:12,773 | INFO     | sum of deviations: 60582039283.76163
[2025-10-12 12:23:04] 2025-10-12 16:22:12,773 | INFO     | mean x: 1760274985.128767
[2025-10-12 12:23:04] 2025-10-12 16:22:12,773 | INFO     | mean y: 2478069.536986301
[2025-10-12 12:23:04] 2025-10-12 16:22:12,773 | INFO     | -- intersect: -7069929328.40517
[2025-10-12 12:23:04] 2025-10-12 16:22:12,773 | INFO     | intersect: -7069929328.40517
[2025-10-12 12:23:04] 2025-10-12 16:22:12,773 | INFO     | chi2: 1.0523282049116032
[2025-10-12 12:23:04] 2025-10-12 16:22:12,791 | INFO     | current chi2=1.0523282049116032 (change=57.57415497052176 %)
[2025-10-12 12:23:04] 2025-10-12 16:22:12,791 | INFO     | sum of square deviations: 14467239329.86385
[2025-10-12 12:23:04] 2025-10-12 16:22:12,794 | INFO     | sum of deviations: 47045678250.441666
[2025-10-12 12:23:04] 2025-10-12 16:22:12,794 | INFO     | mean x: 1760275137.6305556
[2025-10-12 12:23:04] 2025-10-12 16:22:12,794 | INFO     | mean y: 2481452.341666667
[2025-10-12 12:23:04] 2025-10-12 16:22:12,794 | INFO     | -- intersect: -5721716224.14748
[2025-10-12 12:23:04] 2025-10-12 16:22:12,801 | INFO     | intersect: -5721716224.14748
[2025-10-12 12:23:04] 2025-10-12 16:22:12,801 | INFO     | chi2: 1.016155020216157
[2025-10-12 12:23:04] 2025-10-12 16:22:12,801 | INFO     | current chi2=1.016155020216157 (change=3.4374432355431237 %)
[2025-10-12 12:23:04] 2025-10-12 16:22:12,802 | INFO     | left removable region: 20
[2025-10-12 12:23:04] 2025-10-12 16:22:12,802 | INFO     | sum of square deviations: 12080295116.483812
[2025-10-12 12:23:04] 2025-10-12 16:22:12,804 | INFO     | sum of deviations: 29881835899.144566
[2025-10-12 12:23:04] 2025-10-12 16:22:12,804 | INFO     | mean x: 1760275107.138643
[2025-10-12 12:23:04] 2025-10-12 16:22:12,806 | INFO     | mean y: 2497372.401179941
[2025-10-12 12:23:04] 2025-10-12 16:22:12,806 | INFO     | -- intersect: -4351721740.763689
[2025-10-12 12:23:04] 2025-10-12 16:22:12,806 | INFO     | intersect: -4351721740.763689
[2025-10-12 12:23:04] 2025-10-12 16:22:12,807 | INFO     | chi2: 0.023994510604658684
[2025-10-12 12:23:04] 2025-10-12 16:22:12,807 | INFO     | -- intersect: -4351721740.763689
[2025-10-12 12:23:04] 2025-10-12 16:22:12,807 | INFO     | current memory leak: 2.47 B/s (using 339 data points, chi2=0.02)
[2025-10-12 12:23:04] 2025-10-12 16:22:12,809 | INFO     | could have reported an average CPU frequency of 3120 MHz (16 samples)
[2025-10-12 12:23:04] 2025-10-12 16:22:12,809 | INFO     | ..............................
[2025-10-12 12:23:04] 2025-10-12 16:22:12,809 | INFO     | . Timing measurements:
[2025-10-12 12:23:04] 2025-10-12 16:22:12,809 | INFO     | . get job = 0 s
[2025-10-12 12:23:04] 2025-10-12 16:22:12,809 | INFO     | . initial setup = 5 s
[2025-10-12 12:23:04] 2025-10-12 16:22:12,809 | INFO     | . payload setup = 15 s
[2025-10-12 12:23:04] 2025-10-12 16:22:12,809 | INFO     | . stage-in = 0 s
[2025-10-12 12:23:04] 2025-10-12 16:22:12,809 | INFO     | . payload execution = 22541 s
[2025-10-12 12:23:04] 2025-10-12 16:22:12,810 | INFO     | . stage-out = 5 s
[2025-10-12 12:23:04] 2025-10-12 16:22:12,810 | INFO     | . log creation = 0 s
[2025-10-12 12:23:04] 2025-10-12 16:22:12,810 | INFO     | ..............................
[2025-10-12 12:23:04] 2025-10-12 16:22:13,009 | INFO     | 
[2025-10-12 12:23:04] 2025-10-12 16:22:13,010 | INFO     | job summary report
[2025-10-12 12:23:04] 2025-10-12 16:22:13,010 | INFO     | --------------------------------------------------
[2025-10-12 12:23:04] 2025-10-12 16:22:13,010 | INFO     | PanDA job id: 6839387439
[2025-10-12 12:23:04] 2025-10-12 16:22:13,010 | INFO     | task id: 46676269
[2025-10-12 12:23:04] 2025-10-12 16:22:13,010 | INFO     | errors: (none)
[2025-10-12 12:23:04] 2025-10-12 16:22:13,010 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:23:04] 2025-10-12 16:22:13,010 | INFO     | pilot state: finished 
[2025-10-12 12:23:04] 2025-10-12 16:22:13,010 | INFO     | transexitcode: 0
[2025-10-12 12:23:04] 2025-10-12 16:22:13,011 | INFO     | exeerrorcode: 0
[2025-10-12 12:23:04] 2025-10-12 16:22:13,011 | INFO     | exeerrordiag: 
[2025-10-12 12:23:04] 2025-10-12 16:22:13,011 | INFO     | exitcode: 0
[2025-10-12 12:23:04] 2025-10-12 16:22:13,011 | INFO     | exitmsg: OK
[2025-10-12 12:23:04] 2025-10-12 16:22:13,011 | INFO     | cpuconsumptiontime: 37181 s
[2025-10-12 12:23:04] 2025-10-12 16:22:13,011 | INFO     | nevents: 400
[2025-10-12 12:23:04] 2025-10-12 16:22:13,011 | INFO     | neventsw: 0
[2025-10-12 12:23:04] 2025-10-12 16:22:13,011 | INFO     | pid: 673853
[2025-10-12 12:23:04] 2025-10-12 16:22:13,011 | INFO     | pgrp: 673853
[2025-10-12 12:23:04] 2025-10-12 16:22:13,011 | INFO     | corecount: 8
[2025-10-12 12:23:04] 2025-10-12 16:22:13,011 | INFO     | event service: False
[2025-10-12 12:23:04] 2025-10-12 16:22:13,011 | INFO     | sizes: {0: 2348686, 1: 2348714, 2: 2348885, 12: 2348913, 17: 2349203, 23: 2349231, 22561: 2384058, 22567: 2393056, 22569: 2393112, 22582: 2393306}
[2025-10-12 12:23:04] 2025-10-12 16:22:13,011 | INFO     | --------------------------------------------------
[2025-10-12 12:23:04] 2025-10-12 16:22:13,011 | INFO     | 
[2025-10-12 12:23:04] 2025-10-12 16:22:13,012 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 12:23:04] 2025-10-12 16:22:13,076 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,077 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,077 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,077 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,077 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,077 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,077 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,077 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,077 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,077 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,078 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,078 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,078 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,078 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,078 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,078 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,078 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:23:04] 2025-10-12 16:22:13,078 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,078 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:23:04] 2025-10-12 16:22:13,078 | INFO     | job 6839387439 has completed (purged errors)
[2025-10-12 12:23:04] 2025-10-12 16:22:13,078 | INFO     | overall cleanup function is called
[2025-10-12 12:23:04] 2025-10-12 16:22:14,109 | INFO     | --- collectZombieJob: --- 10, [673853]
[2025-10-12 12:23:04] 2025-10-12 16:22:14,109 | INFO     | zombie collector waiting for pid 673853
[2025-10-12 12:23:04] 2025-10-12 16:22:14,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:23:04] 2025-10-12 16:22:14,109 | INFO     | collected zombie processes
[2025-10-12 12:23:04] 2025-10-12 16:22:14,109 | INFO     | will attempt to kill all subprocesses of pid=673853
[2025-10-12 12:23:04] 2025-10-12 16:22:16,296 | INFO     | process IDs to be killed: [673853] (in reverse order)
[2025-10-12 12:23:04] 2025-10-12 16:22:16,498 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:23:04] 2025-10-12 16:22:16,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:23:04] 2025-10-12 16:22:16,597 | INFO     | did not find any defunct processes belonging to 673853
[2025-10-12 12:23:04] 2025-10-12 16:22:16,684 | INFO     | did not find any defunct processes belonging to 673853
[2025-10-12 12:23:04] 2025-10-12 16:22:16,705 | INFO     | ready for new job
[2025-10-12 12:23:04] 2025-10-12 16:22:16,705 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:23:04] 2025-10-12 16:22:16,707 | INFO     | ***************************************
[2025-10-12 12:23:04] 2025-10-12 16:22:16,708 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:23:04] 2025-10-12 16:22:16,708 | INFO     | ***************************************
[2025-10-12 12:23:04] 2025-10-12 16:22:16,708 | INFO     | 
[2025-10-12 12:23:04] 2025-10-12 16:22:16,759 | INFO     | architecture information:
[2025-10-12 12:23:04] 2025-10-12 16:22:16,768 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:23:04] 2025-10-12 16:22:16,920 | INFO     | cat /etc/os-release:
[2025-10-12 12:23:04] NAME="CentOS Linux"
[2025-10-12 12:23:04] VERSION="7 (Core)"
[2025-10-12 12:23:04] ID="centos"
[2025-10-12 12:23:04] ID_LIKE="rhel fedora"
[2025-10-12 12:23:04] VERSION_ID="7"
[2025-10-12 12:23:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:23:04] ANSI_COLOR="0;31"
[2025-10-12 12:23:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:23:04] HOME_URL="https://www.centos.org/"
[2025-10-12 12:23:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:23:04] 
[2025-10-12 12:23:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:23:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:23:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:23:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:23:04] 
[2025-10-12 12:23:04] 2025-10-12 16:22:16,920 | INFO     | ***************************************
[2025-10-12 12:23:04] 2025-10-12 16:22:17,424 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 12:23:04] 2025-10-12 16:22:17,488 | INFO     | sufficient remaining disk space (127620087808 B)
[2025-10-12 12:23:04] 2025-10-12 16:22:17,489 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:23:04] 2025-10-12 16:22:17,489 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:23:04] 2025-10-12 16:22:17,489 | INFO     | update_server=False
[2025-10-12 12:23:04] 2025-10-12 16:22:17,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:23:04] 2025-10-12 16:22:17,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:23:04] 2025-10-12 16:22:17,500 | INFO     | aborting loop
[2025-10-12 12:23:04] 2025-10-12 16:22:17,555 | INFO     | all data control threads have been joined
[2025-10-12 12:23:04] 2025-10-12 16:22:17,640 | INFO     | all job control threads have been joined
[2025-10-12 12:23:04] 2025-10-12 16:22:18,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:23:04] 2025-10-12 16:22:18,496 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:23:04] 2025-10-12 16:22:18,506 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:23:04] 2025-10-12 16:22:18,561 | INFO     | [data] control thread has finished
[2025-10-12 12:23:04] 2025-10-12 16:22:18,616 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:23:04] 2025-10-12 16:22:18,616 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:23:04] 2025-10-12 16:22:18,647 | INFO     | [job] control thread has finished
[2025-10-12 12:23:04] 2025-10-12 16:22:18,872 | INFO     | all payload control threads have been joined
[2025-10-12 12:23:04] 2025-10-12 16:22:18,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:23:04] 2025-10-12 16:22:19,030 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:23:04] 2025-10-12 16:22:19,033 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:23:04] 2025-10-12 16:22:19,034 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:23:04] 2025-10-12 16:22:19,055 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:23:04] 2025-10-12 16:22:19,119 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:23:04] 2025-10-12 16:22:19,183 | INFO     | [job] validate thread has finished
[2025-10-12 12:23:04] 2025-10-12 16:22:19,442 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:23:04] 2025-10-12 16:22:19,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:23:04] 2025-10-12 16:22:19,878 | INFO     | [payload] control thread has finished
[2025-10-12 12:23:04] 2025-10-12 16:22:20,979 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:23:04] 2025-10-12 16:22:23,472 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:23:04] 2025-10-12 16:22:48,513 | INFO     | PID=665634 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 12:23:04] 2025-10-12 16:22:48,513 | INFO     | .. there are 24 such processes running
[2025-10-12 12:23:04] 2025-10-12 16:22:48,513 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:23:04] 2025-10-12 16:22:48,514 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:23:04] 2025-10-12 16:22:48,514 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:23:04] 2025-10-12 16:22:56,053 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:23:04] 2025-10-12 16:22:57,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140605871060800)>', '<ExcThread(monitor, started 140605527148288)>']
[2025-10-12 12:23:04] 2025-10-12 16:22:58,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:23:04] 2025-10-12 16:22:58,617 | INFO     | [monitor] control thread has ended
[2025-10-12 12:23:04] 2025-10-12 16:23:02,663 | INFO     | all workflow threads have been joined
[2025-10-12 12:23:04] 2025-10-12 16:23:02,663 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:23:04] 2025-10-12 16:23:02,663 | INFO     | traces error code: 0
[2025-10-12 12:23:04] 2025-10-12 16:23:02,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:23:04] 2025-10-12 16:23:03,567 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:23:04] 2025-10-12 16:23:03,592 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:23:04] 2025-10-12 16:23:03,608 [wrapper] pilotpid: 665634
[2025-10-12 12:23:04] 2025-10-12 16:23:03,633 [wrapper] Pilot exit status: 0
[2025-10-12 12:23:04] 2025-10-12 16:23:03,648 [wrapper] pandaids: 6839387439
[2025-10-12 12:23:04] 2025-10-12 16:23:03,752 [wrapper] cleanup supervisor_pilot 1663502 665635
[2025-10-12 12:23:04] 2025-10-12 16:23:03,755 [wrapper] Test setup, not cleaning
[2025-10-12 12:23:04] 2025-10-12 16:23:03,783 [wrapper] apfmon messages muted
[2025-10-12 12:23:04] 2025-10-12 16:23:03,828 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:23:04] 2025-10-12 16:23:03,846 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:23:04]  *** Error codes and diagnostics ***
[2025-10-12 12:23:04]     "exeErrorCode": 0,
[2025-10-12 12:23:04]     "exeErrorDiag": "",
[2025-10-12 12:23:04]     "pilotErrorCode": 0,
[2025-10-12 12:23:04]     "pilotErrorDiag": "",
[2025-10-12 12:23:04]  *** Listing of results directory ***
[2025-10-12 12:23:04] total 415504
[2025-10-12 12:23:04] -rwx------. 1 boincer umatlas     36292 Oct 12 00:38 runpilot2-wrapper.sh
[2025-10-12 12:23:04] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 00:38 queuedata.json
[2025-10-12 12:23:04] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:38 pilot3.tar.gz
[2025-10-12 12:23:04] -rw-r--r--. 1 boincer umatlas       100 Oct 12 06:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:23:04] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 06:04 run_atlas
[2025-10-12 12:23:04] -rw-r--r--. 1 boincer umatlas       105 Oct 12 06:04 job.xml
[2025-10-12 12:23:04] -rw-r--r--. 2 boincer umatlas 222319885 Oct 12 06:04 EVNT.46676267._004301.pool.root.1
[2025-10-12 12:23:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 06:04 start_atlas.sh
[2025-10-12 12:23:04] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 06:04 shared
[2025-10-12 12:23:04] -rw-r--r--. 2 boincer umatlas    569672 Oct 12 06:04 input.tar.gz
[2025-10-12 12:23:04] -rw-r--r--. 1 boincer umatlas         0 Oct 12 06:04 boinc_lockfile
[2025-10-12 12:23:04] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 06:04 pandaJob.out
[2025-10-12 12:23:04] -rw-------. 1 boincer umatlas    975536 Oct 12 06:05 agis_schedconf.cvmfs.json
[2025-10-12 12:23:04] drwx------. 5 boincer umatlas      4096 Oct 12 06:05 pilot3
[2025-10-12 12:23:04] -rw-------. 1 boincer umatlas 192541891 Oct 12 12:20 HITS.46676269._071330.pool.root.1
[2025-10-12 12:23:04] -rw-r--r--. 1 boincer umatlas       531 Oct 12 12:20 boinc_task_state.xml
[2025-10-12 12:23:04] -rw-------. 1 boincer umatlas      1047 Oct 12 12:21 memory_monitor_summary.json
[2025-10-12 12:23:04] -rw-------. 1 boincer umatlas   1560580 Oct 12 12:21 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:23:04] -rw-r--r--. 1 boincer umatlas      6947 Oct 12 12:21 init_data.xml
[2025-10-12 12:23:04] -rw-------. 1 boincer umatlas    550783 Oct 12 12:21 log.46676269._071330.job.log.tgz.1
[2025-10-12 12:23:04] -rw-------. 1 boincer umatlas        95 Oct 12 12:22 pilot_heartbeat.json
[2025-10-12 12:23:04] -rw-------. 1 boincer umatlas      7802 Oct 12 12:22 heartbeat.json
[2025-10-12 12:23:04] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 12:22 boinc_mmap_file
[2025-10-12 12:23:04] -rw-r--r--. 1 boincer umatlas        28 Oct 12 12:23 wrapper_checkpoint.txt
[2025-10-12 12:23:04] -rw-------. 1 boincer umatlas      4824 Oct 12 12:23 pilotlog.txt
[2025-10-12 12:23:04] -rw-------. 1 boincer umatlas   2802566 Oct 12 12:23 log.46676269._071330.job.log.1
[2025-10-12 12:23:04] -rw-------. 1 boincer umatlas       357 Oct 12 12:23 output.list
[2025-10-12 12:23:04] -rw-r--r--. 1 boincer umatlas       620 Oct 12 12:23 runtime_log
[2025-10-12 12:23:04] -rw-------. 1 boincer umatlas   3368960 Oct 12 12:23 result.tar.gz
[2025-10-12 12:23:04] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 12:23 runtime_log.err
[2025-10-12 12:23:04] -rw-------. 1 boincer umatlas       661 Oct 12 12:23 EvGNDms12R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzdiNDm64Iyvn.diag
[2025-10-12 12:23:04] -rw-r--r--. 1 boincer umatlas     20991 Oct 12 12:23 stderr.txt
[2025-10-12 12:23:04] HITS file was successfully produced:
[2025-10-12 12:23:04] -rw-------. 1 boincer umatlas 192541891 Oct 12 12:20 shared/HITS.pool.root.1
[2025-10-12 12:23:04]  *** Contents of shared directory: ***
[2025-10-12 12:23:04] total 409020
[2025-10-12 12:23:04] -rw-r--r--. 2 boincer umatlas 222319885 Oct 12 06:04 ATLAS.root_0
[2025-10-12 12:23:04] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 06:04 start_atlas.sh
[2025-10-12 12:23:04] -rw-r--r--. 2 boincer umatlas    569672 Oct 12 06:04 input.tar.gz
[2025-10-12 12:23:04] -rw-------. 1 boincer umatlas 192541891 Oct 12 12:20 HITS.pool.root.1
[2025-10-12 12:23:04] -rw-------. 1 boincer umatlas   3368960 Oct 12 12:23 result.tar.gz
12:23:05 (661188): run_atlas exited; CPU time 37920.780879
12:23:05 (661188): called boinc_finish(0)

</stderr_txt>
]]>

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