Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
18:35:34 (820983): wrapper (7.7.26015): starting
18:35:34 (820983): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 18:35:34] Arguments: --nthreads 12
[2025-10-12 18:35:34] Threads: 12
[2025-10-12 18:35:34] Checking for CVMFS
[2025-10-12 18:35:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:35:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:35:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:35:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:35:36] 2.13.2.0 394421 426 47880 151627 2 80 2007398 4096001 6592 130560 0 1191987 99.996 18558 535 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 18:35:36] CVMFS is ok
[2025-10-12 18:35:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:35:36] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 18:35:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 18:35:36] Further information can be found at the LHC@home message board.
[2025-10-12 18:35:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:35:36] Checking for apptainer binary...
[2025-10-12 18:35:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:35:36] Running /usr/bin/apptainer --version
[2025-10-12 18:35:36] apptainer version 1.4.3
[2025-10-12 18:35:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:35:36] 9628
[2025-10-12 18:35:36] apptainer works
[2025-10-12 18:35:36] Set ATHENA_PROC_NUMBER=12
[2025-10-12 18:35:36] Set ATHENA_CORE_NUMBER=12
[2025-10-12 18:35:36] Starting ATLAS job with PandaID=6839637127
[2025-10-12 18:35:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:09:29]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:09:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 20:09:29]  replicas=None
[2025-10-12 20:09:29]  scope=mc23_13p6TeV
[2025-10-12 20:09:29]  status=None
[2025-10-12 20:09:29]  status_code=0
[2025-10-12 20:09:29]  storage_token=
[2025-10-12 20:09:29]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-6839637127/log.46676269._073385.job.log.tgz.1
[2025-10-12 20:09:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/ae/log.46676269._073385.job.log.tgz.1
[2025-10-12 20:09:29]  workdir=None
[2025-10-12 20:09:29] ]
[2025-10-12 20:09:29] 2025-10-12 18:08:23,991 | INFO     | transferring file log.46676269._073385.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-6839637127/log.46676269._073385.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 20:09:29] 2025-10-12 18:08:23,991 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-6839637127/log.46676269._073385.job.log.tgz.1 /var/lib/boinc/slots/3/log.46676269._073385.job
[2025-10-12 20:09:29] 2025-10-12 18:08:24,011 | INFO     | adding to output.list: log.46676269._073385.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/ae/log.46676269._073385.job.log.tg
[2025-10-12 20:09:29] 2025-10-12 18:08:24,012 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 20:09:29] 2025-10-12 18:08:24,012 | INFO     | summary of transferred files:
[2025-10-12 20:09:29] 2025-10-12 18:08:24,012 | INFO     |  -- lfn=log.46676269._073385.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 20:09:29] 2025-10-12 18:08:24,012 | INFO     | stage-out finished correctly
[2025-10-12 20:09:29] 2025-10-12 18:08:24,051 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 20:09:29] 2025-10-12 18:08:24,051 | INFO     | time since job start (5530s) is within the limit (172800.0s)
[2025-10-12 20:09:29] 2025-10-12 18:08:25,981 | INFO     | monitor loop #425: job 0:6839637127 is in state 'finished'
[2025-10-12 20:09:29] 2025-10-12 18:08:25,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:09:29] 2025-10-12 18:08:26,067 | INFO     | time since job start (5532s) is within the limit (172800.0s)
[2025-10-12 20:09:29] 2025-10-12 18:08:26,975 | INFO     | job 6839637127 has state=finished
[2025-10-12 20:09:29] 2025-10-12 18:08:26,975 | INFO     | preparing for final server update for job 6839637127 in state='finished'
[2025-10-12 20:09:29] 2025-10-12 18:08:26,976 | INFO     | this job has now completed (state=finished)
[2025-10-12 20:09:29] 2025-10-12 18:08:26,976 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 20:09:29] 2025-10-12 18:08:26,976 | INFO     | log transfer has been attempted: DONE
[2025-10-12 20:09:29] 2025-10-12 18:08:26,976 | INFO     | job 6839637127 has finished - writing final server update
[2025-10-12 20:09:29] 2025-10-12 18:08:26,976 | INFO     | total number of processed events: 400 (read)
[2025-10-12 20:09:29] 2025-10-12 18:08:26,977 | INFO     | executing command: lscpu
[2025-10-12 20:09:29] 2025-10-12 18:08:26,996 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 20:09:29] 2025-10-12 18:08:28,073 | INFO     | time since job start (5534s) is within the limit (172800.0s)
[2025-10-12 20:09:29] 2025-10-12 18:08:28,484 | INFO     | monitor loop #426: job 0:6839637127 is in state 'finished'
[2025-10-12 20:09:29] 2025-10-12 18:08:28,485 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 20:09:29] 2025-10-12 18:08:30,078 | INFO     | time since job start (5536s) is within the limit (172800.0s)
[2025-10-12 20:09:29] 2025-10-12 18:08:30,252 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 20:09:29] 2025-10-12 18:08:30,253 | INFO     | found 9 cores (9 cores per socket, 1 socket) , CPU MHz: 2396.3980000000006
[2025-10-12 20:09:29] 2025-10-12 18:08:30,254 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6839637127/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 20:09:29] 2025-10-12 18:08:30,254 | INFO     | extracted standard info from prmon json
[2025-10-12 20:09:29] 2025-10-12 18:08:30,254 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 20:09:29] 2025-10-12 18:08:30,254 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 20:09:29] 2025-10-12 18:08:30,255 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 20:09:29] 2025-10-12 18:08:30,255 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 20:09:29] 2025-10-12 18:08:30,256 | INFO     | fitting pss+swap vs Time
[2025-10-12 20:09:29] 2025-10-12 18:08:30,256 | INFO     | sum of square deviations: 177275882.0
[2025-10-12 20:09:29] 2025-10-12 18:08:30,256 | INFO     | sum of deviations: -7955624269.999999
[2025-10-12 20:09:29] 2025-10-12 18:08:30,256 | INFO     | mean x: 1760289863.0
[2025-10-12 20:09:29] 2025-10-12 18:08:30,256 | INFO     | mean y: 2754922.1325301207
[2025-10-12 20:09:29] 2025-10-12 18:08:30,256 | INFO     | -- intersect: 78999427218.01637
[2025-10-12 20:09:29] 2025-10-12 18:08:30,256 | INFO     | intersect: 78999427218.01637
[2025-10-12 20:09:29] 2025-10-12 18:08:30,256 | INFO     | chi2: 0.034306202954124544
[2025-10-12 20:09:29] 2025-10-12 18:08:30,256 | INFO     | -- intersect: 78999427218.01637
[2025-10-12 20:09:29] 2025-10-12 18:08:30,256 | INFO     | current memory leak: -44.88 B/s (using 83 data points, chi2=0.03)
[2025-10-12 20:09:29] 2025-10-12 18:08:30,257 | INFO     | could have reported an average CPU frequency of 2396 MHz (7 samples)
[2025-10-12 20:09:29] 2025-10-12 18:08:30,257 | INFO     | ..............................
[2025-10-12 20:09:29] 2025-10-12 18:08:30,257 | INFO     | . Timing measurements:
[2025-10-12 20:09:29] 2025-10-12 18:08:30,257 | INFO     | . get job = 0 s
[2025-10-12 20:09:29] 2025-10-12 18:08:30,257 | INFO     | . initial setup = 2 s
[2025-10-12 20:09:29] 2025-10-12 18:08:30,257 | INFO     | . payload setup = 21 s
[2025-10-12 20:09:29] 2025-10-12 18:08:30,257 | INFO     | . stage-in = 0 s
[2025-10-12 20:09:29] 2025-10-12 18:08:30,257 | INFO     | . payload execution = 5462 s
[2025-10-12 20:09:29] 2025-10-12 18:08:30,257 | INFO     | . stage-out = 0 s
[2025-10-12 20:09:29] 2025-10-12 18:08:30,257 | INFO     | . log creation = 0 s
[2025-10-12 20:09:29] 2025-10-12 18:08:30,257 | INFO     | ..............................
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | 
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | job summary report
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | --------------------------------------------------
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | PanDA job id: 6839637127
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | task id: 46676269
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | errors: (none)
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | pilot state: finished 
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | transexitcode: 0
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | exeerrorcode: 0
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | exeerrordiag: 
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | exitcode: 0
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | exitmsg: OK
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | cpuconsumptiontime: 23125 s
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | nevents: 400
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | neventsw: 0
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | pid: 831212
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | pgrp: 831212
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | corecount: 12
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | event service: False
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 20: 2349175, 22: 2349203, 5487: 2384891, 5493: 2385029}
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | --------------------------------------------------
[2025-10-12 20:09:29] 2025-10-12 18:08:30,295 | INFO     | 
[2025-10-12 20:09:29] 2025-10-12 18:08:30,296 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-12 20:09:29] 2025-10-12 18:08:30,313 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,313 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,313 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,313 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,313 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,313 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,313 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,313 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,313 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,314 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,314 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,314 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,314 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,314 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,314 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,314 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 20:09:29] 2025-10-12 18:08:30,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,314 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 20:09:29] 2025-10-12 18:08:30,314 | INFO     | job 6839637127 has completed (purged errors)
[2025-10-12 20:09:29] 2025-10-12 18:08:30,314 | INFO     | overall cleanup function is called
[2025-10-12 20:09:29] 2025-10-12 18:08:31,322 | INFO     | --- collectZombieJob: --- 10, [831212]
[2025-10-12 20:09:29] 2025-10-12 18:08:31,322 | INFO     | zombie collector waiting for pid 831212
[2025-10-12 20:09:29] 2025-10-12 18:08:31,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 20:09:29] 2025-10-12 18:08:31,322 | INFO     | collected zombie processes
[2025-10-12 20:09:29] 2025-10-12 18:08:31,322 | INFO     | will attempt to kill all subprocesses of pid=831212
[2025-10-12 20:09:29] 2025-10-12 18:08:31,367 | INFO     | process IDs to be killed: [831212] (in reverse order)
[2025-10-12 20:09:29] 2025-10-12 18:08:31,403 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 20:09:29] 2025-10-12 18:08:31,403 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 20:09:29] 2025-10-12 18:08:31,405 | INFO     | did not find any defunct processes belonging to 831212
[2025-10-12 20:09:29] 2025-10-12 18:08:31,406 | INFO     | did not find any defunct processes belonging to 831212
[2025-10-12 20:09:29] 2025-10-12 18:08:31,407 | INFO     | ready for new job
[2025-10-12 20:09:29] 2025-10-12 18:08:31,407 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:09:29] 2025-10-12 18:08:31,408 | INFO     | ***************************************
[2025-10-12 20:09:29] 2025-10-12 18:08:31,408 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:09:29] 2025-10-12 18:08:31,408 | INFO     | ***************************************
[2025-10-12 20:09:29] 2025-10-12 18:08:31,408 | INFO     | 
[2025-10-12 20:09:29] 2025-10-12 18:08:31,409 | INFO     | pilot is running in a VM
[2025-10-12 20:09:29] 2025-10-12 18:08:31,409 | INFO     | architecture information:
[2025-10-12 20:09:29] 2025-10-12 18:08:31,409 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:09:29] 2025-10-12 18:08:31,423 | INFO     | cat /etc/os-release:
[2025-10-12 20:09:29] NAME="CentOS Linux"
[2025-10-12 20:09:29] VERSION="7 (Core)"
[2025-10-12 20:09:29] ID="centos"
[2025-10-12 20:09:29] ID_LIKE="rhel fedora"
[2025-10-12 20:09:29] VERSION_ID="7"
[2025-10-12 20:09:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:09:29] ANSI_COLOR="0;31"
[2025-10-12 20:09:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:09:29] HOME_URL="https://www.centos.org/"
[2025-10-12 20:09:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:09:29] 
[2025-10-12 20:09:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:09:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:09:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:09:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:09:29] 
[2025-10-12 20:09:29] 2025-10-12 18:08:31,424 | INFO     | ***************************************
[2025-10-12 20:09:29] 2025-10-12 18:08:31,927 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-12 20:09:29] 2025-10-12 18:08:31,944 | INFO     | sufficient remaining disk space (261218107392 B)
[2025-10-12 20:09:29] 2025-10-12 18:08:31,944 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:09:29] 2025-10-12 18:08:31,944 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:09:29] 2025-10-12 18:08:31,945 | INFO     | update_server=False
[2025-10-12 20:09:29] 2025-10-12 18:08:31,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:09:29] 2025-10-12 18:08:31,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:09:29] 2025-10-12 18:08:31,945 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 20:09:29] 2025-10-12 18:08:31,945 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:09:29] 2025-10-12 18:08:31,945 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:09:29] 2025-10-12 18:08:31,946 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:09:29] 2025-10-12 18:08:31,993 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:09:29] 2025-10-12 18:08:31,993 | INFO     | aborting loop
[2025-10-12 20:09:29] 2025-10-12 18:08:32,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:09:29] 2025-10-12 18:08:32,258 | INFO     | all data control threads have been joined
[2025-10-12 20:09:29] 2025-10-12 18:08:32,950 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:09:29] 2025-10-12 18:08:32,951 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:09:29] 2025-10-12 18:08:32,997 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:09:29] 2025-10-12 18:08:33,048 | INFO     | all payload control threads have been joined
[2025-10-12 20:09:29] 2025-10-12 18:08:33,128 | INFO     | all job control threads have been joined
[2025-10-12 20:09:29] 2025-10-12 18:08:33,196 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:09:29] 2025-10-12 18:08:33,264 | INFO     | [data] control thread has finished
[2025-10-12 20:09:29] 2025-10-12 18:08:33,526 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:09:29] 2025-10-12 18:08:33,603 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:09:29] 2025-10-12 18:08:33,629 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:09:29] 2025-10-12 18:08:33,808 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:09:29] 2025-10-12 18:08:34,054 | INFO     | [payload] control thread has finished
[2025-10-12 20:09:29] 2025-10-12 18:08:34,068 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:09:29] 2025-10-12 18:08:34,134 | INFO     | [job] control thread has finished
[2025-10-12 20:09:29] 2025-10-12 18:08:34,172 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:09:29] 2025-10-12 18:08:34,262 | INFO     | [job] validate thread has finished
[2025-10-12 20:09:29] 2025-10-12 18:08:34,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:09:29] 2025-10-12 18:08:38,604 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:09:29] 2025-10-12 18:08:42,475 | INFO     | job.realtimelogging is not enabled
[2025-10-12 20:09:29] 2025-10-12 18:08:43,480 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:09:29] 2025-10-12 18:09:23,067 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:09:29] 2025-10-12 18:09:23,795 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138016300533568)>', '<ExcThread(monitor, started 138015653476096)>']
[2025-10-12 20:09:29] 2025-10-12 18:09:24,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:09:29] 2025-10-12 18:09:24,210 | INFO     | [monitor] control thread has ended
[2025-10-12 20:09:29] 2025-10-12 18:09:28,796 | INFO     | all workflow threads have been joined
[2025-10-12 20:09:29] 2025-10-12 18:09:28,797 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:09:29] 2025-10-12 18:09:28,797 | INFO     | traces error code: 0
[2025-10-12 20:09:29] 2025-10-12 18:09:28,797 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:09:29] 2025-10-12 18:09:28,893 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:09:29] 2025-10-12 18:09:28,897 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:09:29] 2025-10-12 18:09:28,900 [wrapper] pilotpid: 824779
[2025-10-12 20:09:29] 2025-10-12 18:09:28,904 [wrapper] Pilot exit status: 0
[2025-10-12 20:09:29] 2025-10-12 18:09:28,914 [wrapper] pandaids: 6839637127
[2025-10-12 20:09:29] 2025-10-12 18:09:28,934 [wrapper] cleanup supervisor_pilot  873249 824780
[2025-10-12 20:09:29] 2025-10-12 18:09:28,938 [wrapper] Test setup, not cleaning
[2025-10-12 20:09:29] 2025-10-12 18:09:28,941 [wrapper] apfmon messages muted
[2025-10-12 20:09:29] 2025-10-12 18:09:28,945 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:09:29] 2025-10-12 18:09:28,948 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:09:29]  *** Error codes and diagnostics ***
[2025-10-12 20:09:29]     "exeErrorCode": 0,
[2025-10-12 20:09:29]     "exeErrorDiag": "",
[2025-10-12 20:09:29]     "pilotErrorCode": 0,
[2025-10-12 20:09:29]     "pilotErrorDiag": "",
[2025-10-12 20:09:29]  *** Listing of results directory ***
[2025-10-12 20:09:29] total 407608
[2025-10-12 20:09:29] -rw-r--r-- 1 boinc boinc    557409 Oct 12 08:54 pilot3.tar.gz
[2025-10-12 20:09:29] -rw-r--r-- 1 boinc boinc      5112 Oct 12 09:11 queuedata.json
[2025-10-12 20:09:29] -rwx------ 1 boinc boinc     36292 Oct 12 09:12 runpilot2-wrapper.sh
[2025-10-12 20:09:29] -rw-r--r-- 1 boinc boinc       100 Oct 12 18:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:09:29] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 18:35 run_atlas
[2025-10-12 20:09:29] -rw-r--r-- 1 boinc boinc       105 Oct 12 18:35 job.xml
[2025-10-12 20:09:29] -rw-r--r-- 2 boinc boinc 219983135 Oct 12 18:35 EVNT.46676267._003495.pool.root.1
[2025-10-12 20:09:29] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:35 start_atlas.sh
[2025-10-12 20:09:29] drwxrwx--x 2 boinc boinc      4096 Oct 12 18:35 shared
[2025-10-12 20:09:29] -rw-r--r-- 2 boinc boinc    569680 Oct 12 18:35 input.tar.gz
[2025-10-12 20:09:29] -rw-r--r-- 1 boinc boinc      6401 Oct 12 18:35 init_data.xml
[2025-10-12 20:09:29] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:35 boinc_setup_complete
[2025-10-12 20:09:29] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:35 boinc_lockfile
[2025-10-12 20:09:29] -rw-r--r-- 1 boinc boinc      2550 Oct 12 18:35 pandaJob.out
[2025-10-12 20:09:29] -rw------- 1 boinc boinc    975528 Oct 12 18:36 agis_schedconf.cvmfs.json
[2025-10-12 20:09:29] -rw------- 1 boinc boinc   1560580 Oct 12 18:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:09:29] drwx------ 5 boinc boinc      4096 Oct 12 18:36 pilot3
[2025-10-12 20:09:29] -rw------- 1 boinc boinc 191058265 Oct 12 20:08 HITS.46676269._073385.pool.root.1
[2025-10-12 20:09:29] -rw-r--r-- 1 boinc boinc       530 Oct 12 20:08 boinc_task_state.xml
[2025-10-12 20:09:29] -rw------- 1 boinc boinc        95 Oct 12 20:08 pilot_heartbeat.json
[2025-10-12 20:09:29] -rw------- 1 boinc boinc      1015 Oct 12 20:08 memory_monitor_summary.json
[2025-10-12 20:09:29] -rw------- 1 boinc boinc    404235 Oct 12 20:08 log.46676269._073385.job.log.tgz.1
[2025-10-12 20:09:29] -rw------- 1 boinc boinc      7718 Oct 12 20:08 heartbeat.json
[2025-10-12 20:09:29] -rw-r--r-- 1 boinc boinc      8192 Oct 12 20:09 boinc_mmap_file
[2025-10-12 20:09:29] -rw-r--r-- 1 boinc boinc        27 Oct 12 20:09 wrapper_checkpoint.txt
[2025-10-12 20:09:29] -rw------- 1 boinc boinc      4687 Oct 12 20:09 pilotlog.txt
[2025-10-12 20:09:29] -rw------- 1 boinc boinc    817953 Oct 12 20:09 log.46676269._073385.job.log.1
[2025-10-12 20:09:29] -rw------- 1 boinc boinc       357 Oct 12 20:09 output.list
[2025-10-12 20:09:29] -rw-r--r-- 1 boinc boinc       620 Oct 12 20:09 runtime_log
[2025-10-12 20:09:29] -rw------- 1 boinc boinc   1239040 Oct 12 20:09 result.tar.gz
[2025-10-12 20:09:29] -rw-r--r-- 1 boinc boinc      8638 Oct 12 20:09 runtime_log.err
[2025-10-12 20:09:29] -rw------- 1 boinc boinc       638 Oct 12 20:09 ivALDmtQ5R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbziNDmnRVzdm.diag
[2025-10-12 20:09:29] -rw-r--r-- 1 boinc boinc     21773 Oct 12 20:09 stderr.txt
[2025-10-12 20:09:29] HITS file was successfully produced:
[2025-10-12 20:09:29] -rw------- 1 boinc boinc 191058265 Oct 12 20:08 shared/HITS.pool.root.1
[2025-10-12 20:09:29]  *** Contents of shared directory: ***
[2025-10-12 20:09:29] total 403208
[2025-10-12 20:09:29] -rw-r--r-- 2 boinc boinc 219983135 Oct 12 18:35 ATLAS.root_0
[2025-10-12 20:09:29] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:35 start_atlas.sh
[2025-10-12 20:09:29] -rw-r--r-- 2 boinc boinc    569680 Oct 12 18:35 input.tar.gz
[2025-10-12 20:09:29] -rw------- 1 boinc boinc 191058265 Oct 12 20:08 HITS.pool.root.1
[2025-10-12 20:09:29] -rw------- 1 boinc boinc   1239040 Oct 12 20:09 result.tar.gz
20:09:30 (820983): run_atlas exited; CPU time 23102.966532
20:09:30 (820983): called boinc_finish(0)

</stderr_txt>
]]>

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