Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:11:06 (3684206): wrapper (7.7.26015): starting
21:11:06 (3684206): wrapper: running run_atlas (--nthreads 6)
[2025-10-12 21:11:06] Arguments: --nthreads 6
[2025-10-12 21:11:06] Threads: 6
[2025-10-12 21:11:06] Checking for CVMFS
[2025-10-12 21:11:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:11:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:11:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:11:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:11:07] 2.11.5.0 3651556 4282 71736 151619 2 188 38711307 52428801 1858 130560 0 13348751 99.998 144727 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 21:11:07] CVMFS is ok
[2025-10-12 21:11:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:11:07] Checking for apptainer binary...
[2025-10-12 21:11:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:11:07] Running /usr/bin/apptainer --version
[2025-10-12 21:11:07] apptainer version 1.3.5-1.el9
[2025-10-12 21:11:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:11:07] testio008
[2025-10-12 21:11:07] apptainer works
[2025-10-12 21:11:07] Set ATHENA_PROC_NUMBER=6
[2025-10-12 21:11:07] Set ATHENA_CORE_NUMBER=6
[2025-10-12 21:11:07] Starting ATLAS job with PandaID=6839637123
[2025-10-12 21:11:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:20:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:20:40]  mtime=0
[2025-10-12 22:20:40]  protocol_id=None
[2025-10-12 22:20:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 22:20:40]  replicas=None
[2025-10-12 22:20:40]  scope=mc23_13p6TeV
[2025-10-12 22:20:40]  status=None
[2025-10-12 22:20:40]  status_code=0
[2025-10-12 22:20:40]  storage_token=
[2025-10-12 22:20:40]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6839637123/log.46676269._073381.job.log.tgz.1
[2025-10-12 22:20:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/69/log.46676269._073381.job.log.tgz.1
[2025-10-12 22:20:40]  workdir=None
[2025-10-12 22:20:40] ]
[2025-10-12 22:20:40] 2025-10-12 13:20:01,949 | INFO     | transferring file log.46676269._073381.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6839637123/log.46676269._073381.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 22:20:40] 2025-10-12 13:20:01,949 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6839637123/log.46676269._073381.job.log.tgz.1 /var/lib/boinc/slots/2/log.46676269._073381.job
[2025-10-12 22:20:40] 2025-10-12 13:20:01,962 | INFO     | adding to output.list: log.46676269._073381.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/69/log.46676269._073381.job.log.tg
[2025-10-12 22:20:40] 2025-10-12 13:20:01,963 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 22:20:40] 2025-10-12 13:20:01,963 | INFO     | summary of transferred files:
[2025-10-12 22:20:40] 2025-10-12 13:20:01,964 | INFO     |  -- lfn=log.46676269._073381.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 22:20:40] 2025-10-12 13:20:01,964 | INFO     | stage-out finished correctly
[2025-10-12 22:20:40] 2025-10-12 13:20:03,005 | INFO     | time since job start (4129s) is within the limit (172800.0s)
[2025-10-12 22:20:40] 2025-10-12 13:20:03,452 | INFO     | monitor loop #310: job 0:6839637123 is in state 'finished'
[2025-10-12 22:20:40] 2025-10-12 13:20:03,452 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:20:40] 2025-10-12 13:20:04,644 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 22:20:40] 2025-10-12 13:20:05,010 | INFO     | time since job start (4131s) is within the limit (172800.0s)
[2025-10-12 22:20:40] 2025-10-12 13:20:05,661 | INFO     | job 6839637123 has state=finished
[2025-10-12 22:20:40] 2025-10-12 13:20:05,661 | INFO     | preparing for final server update for job 6839637123 in state='finished'
[2025-10-12 22:20:40] 2025-10-12 13:20:05,661 | INFO     | this job has now completed (state=finished)
[2025-10-12 22:20:40] 2025-10-12 13:20:05,661 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 22:20:40] 2025-10-12 13:20:05,661 | INFO     | log transfer has been attempted: DONE
[2025-10-12 22:20:40] 2025-10-12 13:20:05,661 | INFO     | job 6839637123 has finished - writing final server update
[2025-10-12 22:20:40] 2025-10-12 13:20:05,661 | INFO     | total number of processed events: 400 (read)
[2025-10-12 22:20:40] 2025-10-12 13:20:05,662 | INFO     | executing command: lscpu
[2025-10-12 22:20:40] 2025-10-12 13:20:05,672 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 22:20:40] 2025-10-12 13:20:05,954 | INFO     | monitor loop #311: job 0:6839637123 is in state 'finished'
[2025-10-12 22:20:40] 2025-10-12 13:20:05,955 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 22:20:40] 2025-10-12 13:20:07,015 | INFO     | time since job start (4133s) is within the limit (172800.0s)
[2025-10-12 22:20:40] 2025-10-12 13:20:07,443 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 22:20:40] 2025-10-12 13:20:07,444 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 4097.65185
[2025-10-12 22:20:40] 2025-10-12 13:20:07,446 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6839637123/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 22:20:40] 2025-10-12 13:20:07,446 | INFO     | extracted standard info from prmon json
[2025-10-12 22:20:40] 2025-10-12 13:20:07,446 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 22:20:40] 2025-10-12 13:20:07,446 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 22:20:40] 2025-10-12 13:20:07,447 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 22:20:40] 2025-10-12 13:20:07,447 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 22:20:40] 2025-10-12 13:20:07,447 | INFO     | fitting pss+swap vs Time
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | sum of square deviations: 70364110.0
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | sum of deviations: -2192826597.0
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | mean x: 1760273229.0
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | mean y: 2524917.229508197
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | -- intersect: 54859666641.0184
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | intersect: 54859666641.0184
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | chi2: 0.027060264498146445
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | -- intersect: 54859666641.0184
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | current memory leak: -31.16 B/s (using 61 data points, chi2=0.03)
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | could have reported an average CPU frequency of 3336 MHz (6 samples)
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | ..............................
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | . Timing measurements:
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | . get job = 0 s
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | . initial setup = 4 s
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | . payload setup = 2 s
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | . stage-in = 0 s
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | . payload execution = 4106 s
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | . stage-out = 0 s
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | . log creation = 0 s
[2025-10-12 22:20:40] 2025-10-12 13:20:07,448 | INFO     | ..............................
[2025-10-12 22:20:40] 2025-10-12 13:20:07,637 | INFO     | 
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | job summary report
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | --------------------------------------------------
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | PanDA job id: 6839637123
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | task id: 46676269
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | errors: (none)
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | pilot state: finished 
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | transexitcode: 0
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | exeerrorcode: 0
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | exeerrordiag: 
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | exitcode: 0
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | exitmsg: OK
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | cpuconsumptiontime: 22213 s
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | nevents: 400
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | neventsw: 0
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | pid: 3694696
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | pgrp: 3694696
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | corecount: 6
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | event service: False
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | sizes: {0: 2348857, 2: 2349119, 11: 2349147, 4113: 2375103, 4115: 2384101, 4117: 2384157, 4120: 2384479}
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | --------------------------------------------------
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | 
[2025-10-12 22:20:40] 2025-10-12 13:20:07,638 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-12 22:20:40] 2025-10-12 13:20:07,646 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,646 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,646 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,646 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,646 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,646 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,646 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,647 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,647 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,647 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,647 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,647 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,647 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,647 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,647 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,647 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,647 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,647 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 22:20:40] 2025-10-12 13:20:07,647 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,647 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 22:20:40] 2025-10-12 13:20:07,647 | INFO     | job 6839637123 has completed (purged errors)
[2025-10-12 22:20:40] 2025-10-12 13:20:07,647 | INFO     | overall cleanup function is called
[2025-10-12 22:20:40] 2025-10-12 13:20:08,652 | INFO     | --- collectZombieJob: --- 10, [3694696]
[2025-10-12 22:20:40] 2025-10-12 13:20:08,653 | INFO     | zombie collector waiting for pid 3694696
[2025-10-12 22:20:40] 2025-10-12 13:20:08,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 22:20:40] 2025-10-12 13:20:08,653 | INFO     | collected zombie processes
[2025-10-12 22:20:40] 2025-10-12 13:20:08,653 | INFO     | will attempt to kill all subprocesses of pid=3694696
[2025-10-12 22:20:40] 2025-10-12 13:20:08,687 | INFO     | process IDs to be killed: [3694696] (in reverse order)
[2025-10-12 22:20:40] 2025-10-12 13:20:08,706 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 22:20:40] 2025-10-12 13:20:08,706 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 22:20:40] 2025-10-12 13:20:08,708 | INFO     | did not find any defunct processes belonging to 3694696
[2025-10-12 22:20:40] 2025-10-12 13:20:08,710 | INFO     | did not find any defunct processes belonging to 3694696
[2025-10-12 22:20:40] 2025-10-12 13:20:08,710 | INFO     | ready for new job
[2025-10-12 22:20:40] 2025-10-12 13:20:08,710 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 22:20:40] 2025-10-12 13:20:08,711 | INFO     | ***************************************
[2025-10-12 22:20:40] 2025-10-12 13:20:08,711 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:20:40] 2025-10-12 13:20:08,711 | INFO     | ***************************************
[2025-10-12 22:20:40] 2025-10-12 13:20:08,711 | INFO     | 
[2025-10-12 22:20:40] 2025-10-12 13:20:08,711 | INFO     | architecture information:
[2025-10-12 22:20:40] 2025-10-12 13:20:08,711 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:20:40] 2025-10-12 13:20:08,718 | INFO     | cat /etc/os-release:
[2025-10-12 22:20:40] NAME="CentOS Linux"
[2025-10-12 22:20:40] VERSION="7 (Core)"
[2025-10-12 22:20:40] ID="centos"
[2025-10-12 22:20:40] ID_LIKE="rhel fedora"
[2025-10-12 22:20:40] VERSION_ID="7"
[2025-10-12 22:20:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:20:40] ANSI_COLOR="0;31"
[2025-10-12 22:20:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:20:40] HOME_URL="https://www.centos.org/"
[2025-10-12 22:20:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:20:40] 
[2025-10-12 22:20:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:20:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:20:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:20:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:20:40] 
[2025-10-12 22:20:40] 2025-10-12 13:20:08,718 | INFO     | ***************************************
[2025-10-12 22:20:40] 2025-10-12 13:20:09,220 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-12 22:20:40] 2025-10-12 13:20:09,228 | INFO     | sufficient remaining disk space (280096669696 B)
[2025-10-12 22:20:40] 2025-10-12 13:20:09,228 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:20:40] 2025-10-12 13:20:09,228 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:20:40] 2025-10-12 13:20:09,228 | INFO     | update_server=False
[2025-10-12 22:20:40] 2025-10-12 13:20:09,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:20:40] 2025-10-12 13:20:09,228 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:20:40] 2025-10-12 13:20:09,462 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:20:40] 2025-10-12 13:20:09,463 | INFO     | aborting loop
[2025-10-12 22:20:40] 2025-10-12 13:20:10,060 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:20:40] 2025-10-12 13:20:10,232 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:20:40] 2025-10-12 13:20:10,233 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:20:40] 2025-10-12 13:20:10,238 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:20:40] 2025-10-12 13:20:10,286 | INFO     | all data control threads have been joined
[2025-10-12 22:20:40] 2025-10-12 13:20:10,295 | INFO     | all payload control threads have been joined
[2025-10-12 22:20:40] 2025-10-12 13:20:10,396 | INFO     | all job control threads have been joined
[2025-10-12 22:20:40] 2025-10-12 13:20:10,467 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:20:40] 2025-10-12 13:20:10,643 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:20:40] 2025-10-12 13:20:10,691 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:20:40] 2025-10-12 13:20:10,913 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:20:40] 2025-10-12 13:20:10,976 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:20:40] 2025-10-12 13:20:11,271 | INFO     | [job] validate thread has finished
[2025-10-12 22:20:40] 2025-10-12 13:20:11,291 | INFO     | [data] control thread has finished
[2025-10-12 22:20:40] 2025-10-12 13:20:11,300 | INFO     | [payload] control thread has finished
[2025-10-12 22:20:40] 2025-10-12 13:20:11,402 | INFO     | [job] control thread has finished
[2025-10-12 22:20:40] 2025-10-12 13:20:11,532 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:20:40] 2025-10-12 13:20:11,723 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:20:40] 2025-10-12 13:20:11,750 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:20:40] 2025-10-12 13:20:12,065 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:20:40] 2025-10-12 13:20:14,696 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:20:40] 2025-10-12 13:20:21,297 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:20:40] 2025-10-12 13:20:23,331 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139940307629888)>', '<ExcThread(monitor, started 139939681392384)>']
[2025-10-12 22:20:40] 2025-10-12 13:20:28,356 | INFO     | all workflow threads have been joined
[2025-10-12 22:20:40] 2025-10-12 13:20:28,357 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:20:40] 2025-10-12 13:20:28,357 | INFO     | traces error code: 0
[2025-10-12 22:20:40] 2025-10-12 13:20:28,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:20:40] 2025-10-12 13:20:40,164 | INFO     | PID=3687975 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:20:40] 2025-10-12 13:20:40,168 | INFO     | .. there are 3 such processes running
[2025-10-12 22:20:40] 2025-10-12 13:20:40,168 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:20:40] 2025-10-12 13:20:40,169 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:20:40] 2025-10-12 13:20:40,169 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:20:40] 2025-10-12 13:20:40,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:20:40] 2025-10-12 13:20:40,169 | INFO     | [monitor] control thread has ended
[2025-10-12 22:20:40] 2025-10-12 13:20:40,251 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:20:40] 2025-10-12 13:20:40,253 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:20:40] 2025-10-12 13:20:40,255 [wrapper] pilotpid: 3687975
[2025-10-12 22:20:40] 2025-10-12 13:20:40,257 [wrapper] Pilot exit status: 0
[2025-10-12 22:20:40] 2025-10-12 13:20:40,264 [wrapper] pandaids: 6839637123
[2025-10-12 22:20:40] 2025-10-12 13:20:40,284 [wrapper] cleanup supervisor_pilot 3750126 3687976
[2025-10-12 22:20:40] 2025-10-12 13:20:40,286 [wrapper] Test setup, not cleaning
[2025-10-12 22:20:40] 2025-10-12 13:20:40,288 [wrapper] apfmon messages muted
[2025-10-12 22:20:40] 2025-10-12 13:20:40,290 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:20:40] 2025-10-12 13:20:40,292 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:20:40]  *** Error codes and diagnostics ***
[2025-10-12 22:20:40]     "exeErrorCode": 0,
[2025-10-12 22:20:40]     "exeErrorDiag": "",
[2025-10-12 22:20:40]     "pilotErrorCode": 0,
[2025-10-12 22:20:40]     "pilotErrorDiag": "",
[2025-10-12 22:20:40]  *** Listing of results directory ***
[2025-10-12 22:20:40] total 408140
[2025-10-12 22:20:40] -rw-r--r--. 1 boinc boinc    557409 Oct 12 15:54 pilot3.tar.gz
[2025-10-12 22:20:40] -rw-r--r--. 1 boinc boinc      5112 Oct 12 16:11 queuedata.json
[2025-10-12 22:20:40] -rwx------. 1 boinc boinc     36292 Oct 12 16:12 runpilot2-wrapper.sh
[2025-10-12 22:20:40] -rw-r--r--. 1 boinc boinc       100 Oct 12 21:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:20:40] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 21:11 run_atlas
[2025-10-12 22:20:40] -rw-r--r--. 1 boinc boinc       105 Oct 12 21:11 job.xml
[2025-10-12 22:20:40] -rw-r--r--. 2 boinc boinc 219983135 Oct 12 21:11 EVNT.46676267._003495.pool.root.1
[2025-10-12 22:20:40] drwxrwx--x. 2 boinc boinc        68 Oct 12 21:11 shared
[2025-10-12 22:20:40] -rw-r--r--. 2 boinc boinc    569678 Oct 12 21:11 input.tar.gz
[2025-10-12 22:20:40] -rw-r--r--. 1 boinc boinc      9509 Oct 12 21:11 init_data.xml
[2025-10-12 22:20:40] -rw-r--r--. 2 boinc boinc     15120 Oct 12 21:11 start_atlas.sh
[2025-10-12 22:20:40] -rw-r--r--. 1 boinc boinc         0 Oct 12 21:11 boinc_lockfile
[2025-10-12 22:20:40] -rw-r--r--. 1 boinc boinc      2550 Oct 12 21:11 pandaJob.out
[2025-10-12 22:20:40] -rw-------. 1 boinc boinc    975520 Oct 12 21:11 agis_schedconf.cvmfs.json
[2025-10-12 22:20:40] -rw-------. 1 boinc boinc   1560580 Oct 12 21:11 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:20:40] drwx------. 5 boinc boinc      4096 Oct 12 21:11 pilot3
[2025-10-12 22:20:40] -rw-------. 1 boinc boinc 192243540 Oct 12 22:19 HITS.46676269._073381.pool.root.1
[2025-10-12 22:20:40] -rw-r--r--. 1 boinc boinc       529 Oct 12 22:19 boinc_task_state.xml
[2025-10-12 22:20:40] -rw-------. 1 boinc boinc        95 Oct 12 22:19 pilot_heartbeat.json
[2025-10-12 22:20:40] -rw-------. 1 boinc boinc      1021 Oct 12 22:19 memory_monitor_summary.json
[2025-10-12 22:20:40] -rw-------. 1 boinc boinc    285778 Oct 12 22:20 log.46676269._073381.job.log.tgz.1
[2025-10-12 22:20:40] -rw-------. 1 boinc boinc      7766 Oct 12 22:20 heartbeat.json
[2025-10-12 22:20:40] -rw-r--r--. 1 boinc boinc      8192 Oct 12 22:20 boinc_mmap_file
[2025-10-12 22:20:40] -rw-r--r--. 1 boinc boinc        27 Oct 12 22:20 wrapper_checkpoint.txt
[2025-10-12 22:20:40] -rw-------. 1 boinc boinc       822 Oct 12 22:20 pilotlog.txt
[2025-10-12 22:20:40] -rw-------. 1 boinc boinc    622348 Oct 12 22:20 log.46676269._073381.job.log.1
[2025-10-12 22:20:40] -rw-------. 1 boinc boinc       357 Oct 12 22:20 output.list
[2025-10-12 22:20:40] -rw-r--r--. 1 boinc boinc       620 Oct 12 22:20 runtime_log
[2025-10-12 22:20:40] -rw-------. 1 boinc boinc    931840 Oct 12 22:20 result.tar.gz
[2025-10-12 22:20:40] -rw-r--r--. 1 boinc boinc      8661 Oct 12 22:20 runtime_log.err
[2025-10-12 22:20:40] -rw-------. 1 boinc boinc       642 Oct 12 22:20 Gz4KDmtQ5R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXziNDmc1gIFm.diag
[2025-10-12 22:20:40] -rw-r--r--. 1 boinc boinc     21361 Oct 12 22:20 stderr.txt
[2025-10-12 22:20:40] HITS file was successfully produced:
[2025-10-12 22:20:40] -rw-------. 1 boinc boinc 192243540 Oct 12 22:19 shared/HITS.pool.root.1
[2025-10-12 22:20:40]  *** Contents of shared directory: ***
[2025-10-12 22:20:40] total 404056
[2025-10-12 22:20:40] -rw-r--r--. 2 boinc boinc 219983135 Oct 12 21:11 ATLAS.root_0
[2025-10-12 22:20:40] -rw-r--r--. 2 boinc boinc    569678 Oct 12 21:11 input.tar.gz
[2025-10-12 22:20:40] -rw-r--r--. 2 boinc boinc     15120 Oct 12 21:11 start_atlas.sh
[2025-10-12 22:20:40] -rw-------. 1 boinc boinc 192243540 Oct 12 22:19 HITS.pool.root.1
[2025-10-12 22:20:40] -rw-------. 1 boinc boinc    931840 Oct 12 22:20 result.tar.gz
22:20:41 (3684206): run_atlas exited; CPU time 22237.319504
22:20:41 (3684206): called boinc_finish(0)

</stderr_txt>
]]>

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