Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:56:30 (509136): wrapper (7.7.26015): starting
09:56:30 (509136): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 09:56:30] Arguments: --nthreads 4
[2025-10-13 09:56:30] Threads: 4
[2025-10-13 09:56:30] Checking for CVMFS
[2025-10-13 09:56:30] No cvmfs_config command found, will try listing directly
[2025-10-13 09:56:30] CVMFS is ok
[2025-10-13 09:56:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:56:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:56:30] Further information can be found at the LHC@home message board.
[2025-10-13 09:56:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:56:30] Checking for apptainer binary...
[2025-10-13 09:56:30] which: no apptainer in ((null))
[2025-10-13 09:56:30] apptainer is not installed, using version from CVMFS
[2025-10-13 09:56:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:56:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-10-13 09:56:30] apptainer works
[2025-10-13 09:56:30] Set ATHENA_PROC_NUMBER=4
[2025-10-13 09:56:30] Set ATHENA_CORE_NUMBER=4
[2025-10-13 09:56:30] Starting ATLAS job with PandaID=6839242525
[2025-10-13 09:56:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:03:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:03:28] 2025-10-13 10:54:46,760 | INFO     | time since job start (10686s) is within the limit (172800.0s)
[2025-10-13 13:03:28] 2025-10-13 10:54:47,350 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 13:03:28] 2025-10-13 10:54:47,359 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2869.6736093749996
[2025-10-13 13:03:28] 2025-10-13 10:54:47,371 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6839242525/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 13:03:28] 2025-10-13 10:54:47,372 | INFO     | extracted standard info from prmon json
[2025-10-13 13:03:28] 2025-10-13 10:54:47,372 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 13:03:28] 2025-10-13 10:54:47,372 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 13:03:28] 2025-10-13 10:54:47,373 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 13:03:28] 2025-10-13 10:54:47,373 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:03:28] 2025-10-13 10:54:47,376 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:03:28] 2025-10-13 10:54:47,376 | INFO     | sum of square deviations: 1661798600.0
[2025-10-13 13:03:28] 2025-10-13 10:54:47,377 | INFO     | sum of deviations: 20842528922.0
[2025-10-13 13:03:28] 2025-10-13 10:54:47,377 | INFO     | mean x: 1760347532.0
[2025-10-13 13:03:28] 2025-10-13 10:54:47,377 | INFO     | mean y: 2320374.537142857
[2025-10-13 13:03:28] 2025-10-13 10:54:47,378 | INFO     | -- intersect: -22076224130.483692
[2025-10-13 13:03:28] 2025-10-13 10:54:47,378 | INFO     | intersect: -22076224130.483692
[2025-10-13 13:03:28] 2025-10-13 10:54:47,378 | INFO     | chi2: 1.3332821591468311
[2025-10-13 13:03:28] 2025-10-13 10:54:47,378 | INFO     | sum of square deviations: 1523386702.5
[2025-10-13 13:03:28] 2025-10-13 10:54:47,379 | INFO     | sum of deviations: 20053145856.000008
[2025-10-13 13:03:28] 2025-10-13 10:54:47,379 | INFO     | mean x: 1760347379.5
[2025-10-13 13:03:28] 2025-10-13 10:54:47,380 | INFO     | mean y: 2319504.5764705883
[2025-10-13 13:03:28] 2025-10-13 10:54:47,380 | INFO     | -- intersect: -23170065222.43338
[2025-10-13 13:03:28] 2025-10-13 10:54:47,381 | INFO     | intersect: -23170065222.43338
[2025-10-13 13:03:28] 2025-10-13 10:54:47,381 | INFO     | chi2: 1.3343323638792164
[2025-10-13 13:03:28] 2025-10-13 10:54:47,381 | INFO     | current chi2=1.3343323638792164 (change=-0.07876837810964858 %)
[2025-10-13 13:03:28] 2025-10-13 10:54:47,381 | INFO     | right removable region: 169
[2025-10-13 13:03:28] 2025-10-13 10:54:47,381 | INFO     | sum of square deviations: 1523386702.5
[2025-10-13 13:03:28] 2025-10-13 10:54:47,382 | INFO     | sum of deviations: -1640517072.4999995
[2025-10-13 13:03:28] 2025-10-13 10:54:47,382 | INFO     | mean x: 1760347684.5
[2025-10-13 13:03:28] 2025-10-13 10:54:47,382 | INFO     | mean y: 2344788.794117647
[2025-10-13 13:03:28] 2025-10-13 10:54:47,383 | INFO     | -- intersect: 1898042332.4439664
[2025-10-13 13:03:28] 2025-10-13 10:54:47,383 | INFO     | intersect: 1898042332.4439664
[2025-10-13 13:03:28] 2025-10-13 10:54:47,383 | INFO     | chi2: 0.01053685224665367
[2025-10-13 13:03:28] 2025-10-13 10:54:47,383 | INFO     | current chi2=0.01053685224665367 (change=99.20970574950195 %)
[2025-10-13 13:03:28] 2025-10-13 10:54:47,383 | INFO     | sum of square deviations: 1392881930.0
[2025-10-13 13:03:28] 2025-10-13 10:54:47,384 | INFO     | sum of deviations: -929591383.0000004
[2025-10-13 13:03:28] 2025-10-13 10:54:47,384 | INFO     | mean x: 1760347837.0
[2025-10-13 13:03:28] 2025-10-13 10:54:47,384 | INFO     | mean y: 2343944.587878788
[2025-10-13 13:03:28] 2025-10-13 10:54:47,384 | INFO     | -- intersect: 1177177320.7074823
[2025-10-13 13:03:28] 2025-10-13 10:54:47,384 | INFO     | intersect: 1177177320.7074823
[2025-10-13 13:03:28] 2025-10-13 10:54:47,385 | INFO     | chi2: 0.009207117958548108
[2025-10-13 13:03:28] 2025-10-13 10:54:47,385 | INFO     | current chi2=0.009207117958548108 (change=12.619843734905405 %)
[2025-10-13 13:03:28] 2025-10-13 10:54:47,385 | INFO     | left removable region: 20
[2025-10-13 13:03:28] 2025-10-13 10:54:47,385 | INFO     | sum of square deviations: 1025693650.0
[2025-10-13 13:03:28] 2025-10-13 10:54:47,386 | INFO     | sum of deviations: 1813617413.0
[2025-10-13 13:03:28] 2025-10-13 10:54:47,386 | INFO     | mean x: 1760347959.0
[2025-10-13 13:03:28] 2025-10-13 10:54:47,386 | INFO     | mean y: 2339735.6174496645
[2025-10-13 13:03:28] 2025-10-13 10:54:47,386 | INFO     | -- intersect: -3110283328.1808004
[2025-10-13 13:03:28] 2025-10-13 10:54:47,386 | INFO     | intersect: -3110283328.1808004
[2025-10-13 13:03:28] 2025-10-13 10:54:47,386 | INFO     | chi2: 0.00039659756008379916
[2025-10-13 13:03:28] 2025-10-13 10:54:47,387 | INFO     | -- intersect: -3110283328.1808004
[2025-10-13 13:03:28] 2025-10-13 10:54:47,387 | INFO     | current memory leak: 1.77 B/s (using 149 data points, chi2=0.00)
[2025-10-13 13:03:28] 2025-10-13 10:54:47,387 | INFO     | could have reported an average CPU frequency of 2726 MHz (9 samples)
[2025-10-13 13:03:28] 2025-10-13 10:54:47,387 | INFO     | ..............................
[2025-10-13 13:03:28] 2025-10-13 10:54:47,387 | INFO     | . Timing measurements:
[2025-10-13 13:03:28] 2025-10-13 10:54:47,387 | INFO     | . get job = 0 s
[2025-10-13 13:03:28] 2025-10-13 10:54:47,388 | INFO     | . initial setup = 1 s
[2025-10-13 13:03:28] 2025-10-13 10:54:47,388 | INFO     | . payload setup = 5 s
[2025-10-13 13:03:28] 2025-10-13 10:54:47,388 | INFO     | . stage-in = 0 s
[2025-10-13 13:03:28] 2025-10-13 10:54:47,388 | INFO     | . payload execution = 10655 s
[2025-10-13 13:03:28] 2025-10-13 10:54:47,388 | INFO     | . stage-out = 0 s
[2025-10-13 13:03:28] 2025-10-13 10:54:47,388 | INFO     | . log creation = 0 s
[2025-10-13 13:03:28] 2025-10-13 10:54:47,388 | INFO     | ..............................
[2025-10-13 13:03:28] 2025-10-13 10:54:47,493 | INFO     | 
[2025-10-13 13:03:28] 2025-10-13 10:54:47,493 | INFO     | job summary report
[2025-10-13 13:03:28] 2025-10-13 10:54:47,494 | INFO     | --------------------------------------------------
[2025-10-13 13:03:28] 2025-10-13 10:54:47,494 | INFO     | PanDA job id: 6839242525
[2025-10-13 13:03:28] 2025-10-13 10:54:47,494 | INFO     | task id: 46676269
[2025-10-13 13:03:28] 2025-10-13 10:54:47,494 | INFO     | errors: (none)
[2025-10-13 13:03:28] 2025-10-13 10:54:47,494 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:03:28] 2025-10-13 10:54:47,494 | INFO     | pilot state: finished 
[2025-10-13 13:03:28] 2025-10-13 10:54:47,494 | INFO     | transexitcode: 0
[2025-10-13 13:03:28] 2025-10-13 10:54:47,494 | INFO     | exeerrorcode: 0
[2025-10-13 13:03:28] 2025-10-13 10:54:47,494 | INFO     | exeerrordiag: 
[2025-10-13 13:03:28] 2025-10-13 10:54:47,494 | INFO     | exitcode: 0
[2025-10-13 13:03:28] 2025-10-13 10:54:47,494 | INFO     | exitmsg: OK
[2025-10-13 13:03:28] 2025-10-13 10:54:47,494 | INFO     | cpuconsumptiontime: 40939 s
[2025-10-13 13:03:28] 2025-10-13 10:54:47,494 | INFO     | nevents: 400
[2025-10-13 13:03:28] 2025-10-13 10:54:47,494 | INFO     | neventsw: 0
[2025-10-13 13:03:28] 2025-10-13 10:54:47,495 | INFO     | pid: 564145
[2025-10-13 13:03:28] 2025-10-13 10:54:47,495 | INFO     | pgrp: 564145
[2025-10-13 13:03:28] 2025-10-13 10:54:47,495 | INFO     | corecount: 4
[2025-10-13 13:03:28] 2025-10-13 10:54:47,495 | INFO     | event service: False
[2025-10-13 13:03:28] 2025-10-13 10:54:47,495 | INFO     | sizes: {0: 2348641, 1: 2348896, 5: 2349158, 12: 2349214, 10664: 2378263, 10665: 2387283, 10666: 2387467, 10672: 2387725}
[2025-10-13 13:03:28] 2025-10-13 10:54:47,495 | INFO     | --------------------------------------------------
[2025-10-13 13:03:28] 2025-10-13 10:54:47,495 | INFO     | 
[2025-10-13 13:03:28] 2025-10-13 10:54:47,495 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-10-13 13:03:28] 2025-10-13 10:54:47,515 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,516 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,516 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,516 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,517 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:03:28] 2025-10-13 10:54:47,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,517 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:03:28] 2025-10-13 10:54:47,517 | INFO     | job 6839242525 has completed (purged errors)
[2025-10-13 13:03:28] 2025-10-13 10:54:47,518 | INFO     | overall cleanup function is called
[2025-10-13 13:03:28] 2025-10-13 10:54:48,524 | INFO     | --- collectZombieJob: --- 10, [564145]
[2025-10-13 13:03:28] 2025-10-13 10:54:48,525 | INFO     | zombie collector waiting for pid 564145
[2025-10-13 13:03:28] 2025-10-13 10:54:48,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:03:28] 2025-10-13 10:54:48,525 | INFO     | collected zombie processes
[2025-10-13 13:03:28] 2025-10-13 10:54:48,525 | INFO     | will attempt to kill all subprocesses of pid=564145
[2025-10-13 13:03:28] 2025-10-13 10:54:48,849 | INFO     | process IDs to be killed: [564145] (in reverse order)
[2025-10-13 13:03:28] 2025-10-13 10:54:48,953 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:03:28] 2025-10-13 10:54:48,955 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:03:28] 2025-10-13 10:54:48,968 | INFO     | did not find any defunct processes belonging to 564145
[2025-10-13 13:03:28] 2025-10-13 10:54:48,979 | INFO     | did not find any defunct processes belonging to 564145
[2025-10-13 13:03:28] 2025-10-13 10:54:48,980 | INFO     | ready for new job
[2025-10-13 13:03:28] 2025-10-13 10:54:48,980 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:03:28] 2025-10-13 10:54:48,982 | INFO     | ***************************************
[2025-10-13 13:03:28] 2025-10-13 10:54:48,982 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:03:28] 2025-10-13 10:54:48,982 | INFO     | ***************************************
[2025-10-13 13:03:28] 2025-10-13 10:54:48,982 | INFO     | 
[2025-10-13 13:03:28] 2025-10-13 10:54:48,986 | INFO     | architecture information:
[2025-10-13 13:03:28] 2025-10-13 10:54:48,987 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:03:28] 2025-10-13 10:54:49,002 | INFO     | cat /etc/os-release:
[2025-10-13 13:03:28] NAME="CentOS Linux"
[2025-10-13 13:03:28] VERSION="7 (Core)"
[2025-10-13 13:03:28] ID="centos"
[2025-10-13 13:03:28] ID_LIKE="rhel fedora"
[2025-10-13 13:03:28] VERSION_ID="7"
[2025-10-13 13:03:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:03:28] ANSI_COLOR="0;31"
[2025-10-13 13:03:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:03:28] HOME_URL="https://www.centos.org/"
[2025-10-13 13:03:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:03:28] 
[2025-10-13 13:03:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:03:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:03:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:03:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:03:28] 
[2025-10-13 13:03:28] 2025-10-13 10:54:49,003 | INFO     | ***************************************
[2025-10-13 13:03:28] 2025-10-13 10:54:49,506 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-10-13 13:03:28] 2025-10-13 10:54:49,522 | INFO     | sufficient remaining disk space (693181087744 B)
[2025-10-13 13:03:28] 2025-10-13 10:54:49,522 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:03:28] 2025-10-13 10:54:49,522 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:03:28] 2025-10-13 10:54:49,523 | INFO     | update_server=False
[2025-10-13 13:03:28] 2025-10-13 10:54:49,523 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:03:28] 2025-10-13 10:54:49,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:03:28] 2025-10-13 10:54:49,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:03:28] 2025-10-13 10:54:49,524 | INFO     | aborting loop
[2025-10-13 13:03:28] 2025-10-13 10:54:49,736 | INFO     | all data control threads have been joined
[2025-10-13 13:03:28] 2025-10-13 10:54:50,528 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:03:28] 2025-10-13 10:54:50,529 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:03:28] 2025-10-13 10:54:50,600 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:03:28] 2025-10-13 10:54:50,606 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:03:28] 2025-10-13 10:54:50,661 | INFO     | all payload control threads have been joined
[2025-10-13 13:03:28] 2025-10-13 10:54:50,664 | INFO     | all job control threads have been joined
[2025-10-13 13:03:28] 2025-10-13 10:54:50,742 | INFO     | [data] control thread has finished
[2025-10-13 13:03:28] 2025-10-13 10:54:51,324 | INFO     | [job] validate thread has finished
[2025-10-13 13:03:28] 2025-10-13 10:54:51,412 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:03:28] 2025-10-13 10:54:51,526 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:03:28] 2025-10-13 10:54:51,593 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:03:28] 2025-10-13 10:54:51,666 | INFO     | [payload] control thread has finished
[2025-10-13 13:03:28] 2025-10-13 10:54:51,670 | INFO     | [job] control thread has finished
[2025-10-13 13:03:28] 2025-10-13 10:54:51,872 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:03:28] 2025-10-13 10:54:51,979 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:03:28] 2025-10-13 10:54:52,490 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:03:28] 2025-10-13 10:54:52,505 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:03:28] 2025-10-13 10:54:53,495 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:03:28] 2025-10-13 10:54:56,511 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:03:28] 2025-10-13 10:54:56,809 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:03:28] 2025-10-13 10:54:59,719 | INFO     | job.realtimelogging is not enabled
[2025-10-13 13:03:28] 2025-10-13 10:55:00,724 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:03:28] 2025-10-13 10:55:01,422 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23218101430080)>', '<ExcThread(monitor, started 23217251022592)>']
[2025-10-13 13:03:28] 2025-10-13 10:55:06,447 | INFO     | all workflow threads have been joined
[2025-10-13 13:03:28] 2025-10-13 10:55:06,448 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:03:28] 2025-10-13 10:55:06,448 | INFO     | traces error code: 0
[2025-10-13 13:03:28] 2025-10-13 10:55:06,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:03:28] 2025-10-13 10:55:20,291 | INFO     | PID=520227 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 13:03:28] 2025-10-13 10:55:20,293 | INFO     | .. there are 4 such processes running
[2025-10-13 13:03:28] 2025-10-13 10:55:20,293 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:03:28] 2025-10-13 10:55:20,293 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:03:28] 2025-10-13 10:55:20,293 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:03:28] 2025-10-13 10:55:20,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:03:28] 2025-10-13 10:55:20,294 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 13:03:28] 2025-10-13 10:55:20,294 | INFO     | [monitor] control thread has ended
[2025-10-13 13:03:28] 2025-10-13 10:55:20,456 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:03:28] 2025-10-13 10:55:20,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:03:28] 2025-10-13 10:55:20,461 [wrapper] pilotpid: 520227
[2025-10-13 13:03:28] 2025-10-13 10:55:20,464 [wrapper] Pilot exit status: 0
[2025-10-13 13:03:28] 2025-10-13 10:55:20,472 [wrapper] pandaids: 6839242525
[2025-10-13 13:03:28] 2025-10-13 10:55:20,540 [wrapper] cleanup supervisor_pilot  746777 520228
[2025-10-13 13:03:28] 2025-10-13 10:55:20,543 [wrapper] Test setup, not cleaning
[2025-10-13 13:03:28] 2025-10-13 10:55:20,545 [wrapper] apfmon messages muted
[2025-10-13 13:03:28] 2025-10-13 10:55:20,548 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:03:28] 2025-10-13 10:55:20,550 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:03:28]  *** Error codes and diagnostics ***
[2025-10-13 13:03:28]     "exeErrorCode": 0,
[2025-10-13 13:03:28]     "exeErrorDiag": "",
[2025-10-13 13:03:28]     "pilotErrorCode": 0,
[2025-10-13 13:03:28]     "pilotErrorDiag": "",
[2025-10-13 13:03:28]  *** Listing of results directory ***
[2025-10-13 13:03:28] total 421200
[2025-10-13 13:03:28] -rw-r--r-- 1 boinc boinc    557409 Oct 12 03:53 pilot3.tar.gz
[2025-10-13 13:03:28] -rwx------ 1 boinc boinc     36292 Oct 12 04:01 runpilot2-wrapper.sh
[2025-10-13 13:03:28] -rw-r--r-- 1 boinc boinc      5112 Oct 12 04:01 queuedata.json
[2025-10-13 13:03:28] -rw-r--r-- 1 boinc boinc       100 Oct 13 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:03:28] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 09:56 run_atlas
[2025-10-13 13:03:28] -rw-r--r-- 1 boinc boinc       105 Oct 13 09:56 job.xml
[2025-10-13 13:03:28] -rw-r--r-- 1 boinc boinc      6634 Oct 13 09:56 init_data.xml
[2025-10-13 13:03:28] -rw-r--r-- 2 boinc boinc 222302288 Oct 13 09:56 EVNT.46676267._003171.pool.root.1
[2025-10-13 13:03:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:56 start_atlas.sh
[2025-10-13 13:03:28] drwxrwx--x 2 boinc boinc      4096 Oct 13 09:56 shared
[2025-10-13 13:03:28] -rw-r--r-- 2 boinc boinc    569676 Oct 13 09:56 input.tar.gz
[2025-10-13 13:03:28] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:56 boinc_lockfile
[2025-10-13 13:03:28] -rw-r--r-- 1 boinc boinc      2550 Oct 13 09:56 pandaJob.out
[2025-10-13 13:03:28] -rw------- 1 boinc boinc    972849 Oct 13 09:56 agis_schedconf.cvmfs.json
[2025-10-13 13:03:28] -rw------- 1 boinc boinc   1560580 Oct 13 09:56 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:03:28] drwx------ 5 boinc boinc      4096 Oct 13 09:56 pilot3
[2025-10-13 13:03:28] -rw------- 1 boinc boinc 201353625 Oct 13 12:54 HITS.46676269._069060.pool.root.1
[2025-10-13 13:03:28] -rw-r--r-- 1 boinc boinc       527 Oct 13 12:54 boinc_task_state.xml
[2025-10-13 13:03:28] -rw------- 1 boinc boinc      1033 Oct 13 12:54 memory_monitor_summary.json
[2025-10-13 13:03:28] -rw------- 1 boinc boinc    355936 Oct 13 12:54 log.46676269._069060.job.log.tgz.1
[2025-10-13 13:03:28] -rw------- 1 boinc boinc      7830 Oct 13 12:54 heartbeat.json
[2025-10-13 13:03:28] -rw------- 1 boinc boinc        95 Oct 13 12:54 pilot_heartbeat.json
[2025-10-13 13:03:28] -rw------- 1 boinc boinc       891 Oct 13 12:55 pilotlog.txt
[2025-10-13 13:03:28] -rw------- 1 boinc boinc   1520150 Oct 13 12:55 log.46676269._069060.job.log.1
[2025-10-13 13:03:28] -rw------- 1 boinc boinc       357 Oct 13 12:55 output.list
[2025-10-13 13:03:28] -rw-r--r-- 1 boinc boinc       620 Oct 13 12:55 runtime_log
[2025-10-13 13:03:28] -rw------- 1 boinc boinc   1894400 Oct 13 12:55 result.tar.gz
[2025-10-13 13:03:28] -rw-r--r-- 1 boinc boinc      9070 Oct 13 12:55 runtime_log.err
[2025-10-13 13:03:28] -rw------- 1 boinc boinc       664 Oct 13 12:55 OOgLDmLa0R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaIiNDmieb0Go.diag
[2025-10-13 13:03:28] -rw-r--r-- 1 boinc boinc        26 Oct 13 13:03 wrapper_checkpoint.txt
[2025-10-13 13:03:28] -rw-r--r-- 1 boinc boinc      8192 Oct 13 13:03 boinc_mmap_file
[2025-10-13 13:03:28] -rw-r--r-- 1 boinc boinc     20859 Oct 13 13:03 stderr.txt
[2025-10-13 13:03:28] HITS file was successfully produced:
[2025-10-13 13:03:28] -rw------- 1 boinc boinc 201353625 Oct 13 12:54 shared/HITS.pool.root.1
[2025-10-13 13:03:28]  *** Contents of shared directory: ***
[2025-10-13 13:03:28] total 416168
[2025-10-13 13:03:28] -rw-r--r-- 2 boinc boinc 222302288 Oct 13 09:56 ATLAS.root_0
[2025-10-13 13:03:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:56 start_atlas.sh
[2025-10-13 13:03:28] -rw-r--r-- 2 boinc boinc    569676 Oct 13 09:56 input.tar.gz
[2025-10-13 13:03:28] -rw------- 1 boinc boinc 201353625 Oct 13 12:54 HITS.pool.root.1
[2025-10-13 13:03:28] -rw------- 1 boinc boinc   1894400 Oct 13 12:55 result.tar.gz
13:03:30 (509136): run_atlas exited; CPU time 41315.450103
13:03:30 (509136): called boinc_finish(0)

</stderr_txt>
]]>

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