Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
05:32:18 (409740): wrapper (7.7.26015): starting
05:32:18 (409740): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 05:32:18] Arguments: --nthreads 4
[2025-10-12 05:32:18] Threads: 4
[2025-10-12 05:32:18] Checking for CVMFS
[2025-10-12 05:32:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:32:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:32:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:32:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:32:19] 2.13.2.0 3732220 6398 59648 151615 2 188 2609442 4096000 13696 130560 0 44729794 99.998 349320 1301 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 05:32:19] CVMFS is ok
[2025-10-12 05:32:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:32:19] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 05:32:19] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 05:32:19] Further information can be found at the LHC@home message board.
[2025-10-12 05:32:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:32:19] Checking for apptainer binary...
[2025-10-12 05:32:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:32:19] Running /usr/bin/apptainer --version
[2025-10-12 05:32:19] apptainer version 1.4.3
[2025-10-12 05:32:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:32:19] T7810-Ubuntu
[2025-10-12 05:32:19] apptainer works
[2025-10-12 05:32:19] Set ATHENA_PROC_NUMBER=4
[2025-10-12 05:32:19] Set ATHENA_CORE_NUMBER=4
[2025-10-12 05:32:19] Starting ATLAS job with PandaID=6838990024
[2025-10-12 05:32:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:14:01]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:14:01] 2025-10-12 13:13:20,418 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:14:01] 2025-10-12 13:13:20,423 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:14:01] 2025-10-12 13:13:20,423 | INFO     | sum of square deviations: 3168461268.0
[2025-10-12 09:14:01] 2025-10-12 13:13:20,425 | INFO     | sum of deviations: 12706124198.000002
[2025-10-12 09:14:01] 2025-10-12 13:13:20,425 | INFO     | mean x: 1760268170.0
[2025-10-12 09:14:01] 2025-10-12 13:13:20,425 | INFO     | mean y: 2288544.8433179725
[2025-10-12 09:14:01] 2025-10-12 13:13:20,426 | INFO     | -- intersect: -7056717104.26919
[2025-10-12 09:14:01] 2025-10-12 13:13:20,426 | INFO     | intersect: -7056717104.26919
[2025-10-12 09:14:01] 2025-10-12 13:13:20,426 | INFO     | chi2: 2.211710178360227
[2025-10-12 09:14:01] 2025-10-12 13:13:20,427 | INFO     | sum of square deviations: 2954447953.0
[2025-10-12 09:14:01] 2025-10-12 13:13:20,428 | INFO     | sum of deviations: 25768861472.000004
[2025-10-12 09:14:01] 2025-10-12 13:13:20,428 | INFO     | mean x: 1760268017.5
[2025-10-12 09:14:01] 2025-10-12 13:13:20,428 | INFO     | mean y: 2297670.8773584906
[2025-10-12 09:14:01] 2025-10-12 13:13:20,429 | INFO     | -- intersect: -15350859134.775658
[2025-10-12 09:14:01] 2025-10-12 13:13:20,429 | INFO     | intersect: -15350859134.775658
[2025-10-12 09:14:01] 2025-10-12 13:13:20,429 | INFO     | chi2: 1.3933176212697518
[2025-10-12 09:14:01] 2025-10-12 13:13:20,429 | INFO     | current chi2=1.3933176212697518 (change=37.00270338753134 %)
[2025-10-12 09:14:01] 2025-10-12 13:13:20,430 | INFO     | sum of square deviations: 2750295288.0
[2025-10-12 09:14:01] 2025-10-12 13:13:20,431 | INFO     | sum of deviations: 24956898768.0
[2025-10-12 09:14:01] 2025-10-12 13:13:20,431 | INFO     | mean x: 1760267865.0
[2025-10-12 09:14:01] 2025-10-12 13:13:20,431 | INFO     | mean y: 2297064.7053140095
[2025-10-12 09:14:01] 2025-10-12 13:13:20,432 | INFO     | -- intersect: -15970833930.735817
[2025-10-12 09:14:01] 2025-10-12 13:13:20,432 | INFO     | intersect: -15970833930.735817
[2025-10-12 09:14:01] 2025-10-12 13:13:20,432 | INFO     | chi2: 1.3941206938853512
[2025-10-12 09:14:01] 2025-10-12 13:13:20,432 | INFO     | current chi2=1.3941206938853512 (change=-0.05763744054765978 %)
[2025-10-12 09:14:01] 2025-10-12 13:13:20,432 | INFO     | right removable region: 206
[2025-10-12 09:14:01] 2025-10-12 13:13:20,433 | INFO     | sum of square deviations: 2954447953.0
[2025-10-12 09:14:01] 2025-10-12 13:13:20,434 | INFO     | sum of deviations: -14869108070.000002
[2025-10-12 09:14:01] 2025-10-12 13:13:20,434 | INFO     | mean x: 1760268322.5
[2025-10-12 09:14:01] 2025-10-12 13:13:20,435 | INFO     | mean y: 2307951.0943396227
[2025-10-12 09:14:01] 2025-10-12 13:13:20,435 | INFO     | -- intersect: 8861363969.621572
[2025-10-12 09:14:01] 2025-10-12 13:13:20,435 | INFO     | intersect: 8861363969.621572
[2025-10-12 09:14:01] 2025-10-12 13:13:20,435 | INFO     | chi2: 0.8540939678138209
[2025-10-12 09:14:01] 2025-10-12 13:13:20,435 | INFO     | current chi2=0.8540939678138209 (change=61.38309728958021 %)
[2025-10-12 09:14:01] 2025-10-12 13:13:20,436 | INFO     | sum of square deviations: 2750295288.0
[2025-10-12 09:14:01] 2025-10-12 13:13:20,437 | INFO     | sum of deviations: -16092106281.0
[2025-10-12 09:14:01] 2025-10-12 13:13:20,437 | INFO     | mean x: 1760268475.0
[2025-10-12 09:14:01] 2025-10-12 13:13:20,438 | INFO     | mean y: 2308862.5120772948
[2025-10-12 09:14:01] 2025-10-12 13:13:20,438 | INFO     | -- intersect: 10301721986.036213
[2025-10-12 09:14:01] 2025-10-12 13:13:20,438 | INFO     | intersect: 10301721986.036213
[2025-10-12 09:14:01] 2025-10-12 13:13:20,438 | INFO     | chi2: 0.8505561667940363
[2025-10-12 09:14:01] 2025-10-12 13:13:20,438 | INFO     | current chi2=0.8505561667940363 (change=0.4142168371520099 %)
[2025-10-12 09:14:01] 2025-10-12 13:13:20,438 | INFO     | left removable region: 20
[2025-10-12 09:14:01] 2025-10-12 13:13:20,439 | INFO     | sum of square deviations: 1995283922.5
[2025-10-12 09:14:01] 2025-10-12 13:13:20,440 | INFO     | sum of deviations: 20333678.999999832
[2025-10-12 09:14:01] 2025-10-12 13:13:20,440 | INFO     | mean x: 1760268444.5
[2025-10-12 09:14:01] 2025-10-12 13:13:20,440 | INFO     | mean y: 2316033.1827956988
[2025-10-12 09:14:01] 2025-10-12 13:13:20,440 | INFO     | -- intersect: -15622633.64084379
[2025-10-12 09:14:01] 2025-10-12 13:13:20,441 | INFO     | intersect: -15622633.64084379
[2025-10-12 09:14:01] 2025-10-12 13:13:20,441 | INFO     | chi2: 0.0067235884012941585
[2025-10-12 09:14:01] 2025-10-12 13:13:20,441 | INFO     | -- intersect: -15622633.64084379
[2025-10-12 09:14:01] 2025-10-12 13:13:20,441 | INFO     | current memory leak: 0.01 B/s (using 186 data points, chi2=0.01)
[2025-10-12 09:14:01] 2025-10-12 13:13:20,442 | INFO     | could have reported an average CPU frequency of 2631 MHz (11 samples)
[2025-10-12 09:14:01] 2025-10-12 13:13:20,442 | INFO     | ..............................
[2025-10-12 09:14:01] 2025-10-12 13:13:20,442 | INFO     | . Timing measurements:
[2025-10-12 09:14:01] 2025-10-12 13:13:20,442 | INFO     | . get job = 0 s
[2025-10-12 09:14:01] 2025-10-12 13:13:20,442 | INFO     | . initial setup = 4 s
[2025-10-12 09:14:01] 2025-10-12 13:13:20,443 | INFO     | . payload setup = 6 s
[2025-10-12 09:14:01] 2025-10-12 13:13:20,443 | INFO     | . stage-in = 0 s
[2025-10-12 09:14:01] 2025-10-12 13:13:20,443 | INFO     | . payload execution = 13208 s
[2025-10-12 09:14:01] 2025-10-12 13:13:20,443 | INFO     | . stage-out = 3 s
[2025-10-12 09:14:01] 2025-10-12 13:13:20,443 | INFO     | . log creation = 0 s
[2025-10-12 09:14:01] 2025-10-12 13:13:20,443 | INFO     | ..............................
[2025-10-12 09:14:01] 2025-10-12 13:13:20,489 | INFO     | time since job start (13246s) is within the limit (172800.0s)
[2025-10-12 09:14:01] 2025-10-12 13:13:20,556 | INFO     | 
[2025-10-12 09:14:01] 2025-10-12 13:13:20,556 | INFO     | job summary report
[2025-10-12 09:14:01] 2025-10-12 13:13:20,556 | INFO     | --------------------------------------------------
[2025-10-12 09:14:01] 2025-10-12 13:13:20,556 | INFO     | PanDA job id: 6838990024
[2025-10-12 09:14:01] 2025-10-12 13:13:20,557 | INFO     | task id: 46676269
[2025-10-12 09:14:01] 2025-10-12 13:13:20,557 | INFO     | errors: (none)
[2025-10-12 09:14:01] 2025-10-12 13:13:20,557 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:14:01] 2025-10-12 13:13:20,557 | INFO     | pilot state: finished 
[2025-10-12 09:14:01] 2025-10-12 13:13:20,557 | INFO     | transexitcode: 0
[2025-10-12 09:14:01] 2025-10-12 13:13:20,557 | INFO     | exeerrorcode: 0
[2025-10-12 09:14:01] 2025-10-12 13:13:20,557 | INFO     | exeerrordiag: 
[2025-10-12 09:14:01] 2025-10-12 13:13:20,557 | INFO     | exitcode: 0
[2025-10-12 09:14:01] 2025-10-12 13:13:20,558 | INFO     | exitmsg: OK
[2025-10-12 09:14:01] 2025-10-12 13:13:20,558 | INFO     | cpuconsumptiontime: 49918 s
[2025-10-12 09:14:01] 2025-10-12 13:13:20,558 | INFO     | nevents: 400
[2025-10-12 09:14:01] 2025-10-12 13:13:20,558 | INFO     | neventsw: 0
[2025-10-12 09:14:01] 2025-10-12 13:13:20,558 | INFO     | pid: 420740
[2025-10-12 09:14:01] 2025-10-12 13:13:20,558 | INFO     | pgrp: 420740
[2025-10-12 09:14:01] 2025-10-12 13:13:20,558 | INFO     | corecount: 4
[2025-10-12 09:14:01] 2025-10-12 13:13:20,558 | INFO     | event service: False
[2025-10-12 09:14:01] 2025-10-12 13:13:20,559 | INFO     | sizes: {0: 2348701, 1: 2348900, 6: 2349162, 12: 2349190, 13218: 2379167, 13219: 2379166, 13223: 2388434, 13230: 2388572}
[2025-10-12 09:14:01] 2025-10-12 13:13:20,559 | INFO     | --------------------------------------------------
[2025-10-12 09:14:01] 2025-10-12 13:13:20,559 | INFO     | 
[2025-10-12 09:14:01] 2025-10-12 13:13:20,559 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/24
[2025-10-12 09:14:01] 2025-10-12 13:13:20,583 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,583 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,583 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,583 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,585 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,585 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:14:01] 2025-10-12 13:13:20,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,586 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:14:01] 2025-10-12 13:13:20,586 | INFO     | job 6838990024 has completed (purged errors)
[2025-10-12 09:14:01] 2025-10-12 13:13:20,586 | INFO     | overall cleanup function is called
[2025-10-12 09:14:01] 2025-10-12 13:13:21,595 | INFO     | --- collectZombieJob: --- 10, [420740]
[2025-10-12 09:14:01] 2025-10-12 13:13:21,595 | INFO     | zombie collector waiting for pid 420740
[2025-10-12 09:14:01] 2025-10-12 13:13:21,595 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:14:01] 2025-10-12 13:13:21,595 | INFO     | collected zombie processes
[2025-10-12 09:14:01] 2025-10-12 13:13:21,595 | INFO     | will attempt to kill all subprocesses of pid=420740
[2025-10-12 09:14:01] 2025-10-12 13:13:22,501 | INFO     | PID=413770 has CPU usage=15.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:14:01] 2025-10-12 13:13:22,501 | INFO     | .. there are 15 such processes running
[2025-10-12 09:14:01] 2025-10-12 13:13:22,584 | INFO     | process IDs to be killed: [420740] (in reverse order)
[2025-10-12 09:14:01] 2025-10-12 13:13:22,668 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:14:01] 2025-10-12 13:13:22,669 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:14:01] 2025-10-12 13:13:22,680 | INFO     | did not find any defunct processes belonging to 420740
[2025-10-12 09:14:01] 2025-10-12 13:13:22,685 | INFO     | did not find any defunct processes belonging to 420740
[2025-10-12 09:14:01] 2025-10-12 13:13:22,686 | INFO     | ready for new job
[2025-10-12 09:14:01] 2025-10-12 13:13:22,686 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:14:01] 2025-10-12 13:13:22,687 | INFO     | ***************************************
[2025-10-12 09:14:01] 2025-10-12 13:13:22,688 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:14:01] 2025-10-12 13:13:22,688 | INFO     | ***************************************
[2025-10-12 09:14:01] 2025-10-12 13:13:22,688 | INFO     | 
[2025-10-12 09:14:01] 2025-10-12 13:13:22,690 | INFO     | architecture information:
[2025-10-12 09:14:01] 2025-10-12 13:13:22,690 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:14:01] 2025-10-12 13:13:22,703 | INFO     | cat /etc/os-release:
[2025-10-12 09:14:01] NAME="CentOS Linux"
[2025-10-12 09:14:01] VERSION="7 (Core)"
[2025-10-12 09:14:01] ID="centos"
[2025-10-12 09:14:01] ID_LIKE="rhel fedora"
[2025-10-12 09:14:01] VERSION_ID="7"
[2025-10-12 09:14:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:14:01] ANSI_COLOR="0;31"
[2025-10-12 09:14:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:14:01] HOME_URL="https://www.centos.org/"
[2025-10-12 09:14:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:14:01] 
[2025-10-12 09:14:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:14:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:14:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:14:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:14:01] 
[2025-10-12 09:14:01] 2025-10-12 13:13:22,703 | INFO     | ***************************************
[2025-10-12 09:14:01] 2025-10-12 13:13:23,205 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/24
[2025-10-12 09:14:01] 2025-10-12 13:13:23,220 | INFO     | sufficient remaining disk space (398687469568 B)
[2025-10-12 09:14:01] 2025-10-12 13:13:23,221 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:14:01] 2025-10-12 13:13:23,221 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:14:01] 2025-10-12 13:13:23,221 | INFO     | update_server=False
[2025-10-12 09:14:01] 2025-10-12 13:13:23,221 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:14:01] 2025-10-12 13:13:23,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:14:01] 2025-10-12 13:13:23,222 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 09:14:01] 2025-10-12 13:13:23,222 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:14:01] 2025-10-12 13:13:23,222 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:14:01] 2025-10-12 13:13:23,222 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:14:01] 2025-10-12 13:13:23,309 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:14:01] 2025-10-12 13:13:23,742 | INFO     | all payload control threads have been joined
[2025-10-12 09:14:01] 2025-10-12 13:13:23,980 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:14:01] 2025-10-12 13:13:23,980 | INFO     | aborting loop
[2025-10-12 09:14:01] 2025-10-12 13:13:24,227 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:14:01] 2025-10-12 13:13:24,245 | INFO     | all data control threads have been joined
[2025-10-12 09:14:01] 2025-10-12 13:13:24,250 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:14:01] 2025-10-12 13:13:24,323 | INFO     | all job control threads have been joined
[2025-10-12 09:14:01] 2025-10-12 13:13:24,406 | INFO     | [job] validate thread has finished
[2025-10-12 09:14:01] 2025-10-12 13:13:24,559 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:14:01] 2025-10-12 13:13:24,596 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:14:01] 2025-10-12 13:13:24,625 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:14:01] 2025-10-12 13:13:24,748 | INFO     | [payload] control thread has finished
[2025-10-12 09:14:01] 2025-10-12 13:13:24,757 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:14:01] 2025-10-12 13:13:24,985 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:14:01] 2025-10-12 13:13:25,018 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:14:01] 2025-10-12 13:13:25,202 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:14:01] 2025-10-12 13:13:25,227 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:14:01] 2025-10-12 13:13:25,248 | INFO     | [data] control thread has finished
[2025-10-12 09:14:01] 2025-10-12 13:13:25,329 | INFO     | [job] control thread has finished
[2025-10-12 09:14:01] 2025-10-12 13:13:25,566 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:14:01] 2025-10-12 13:13:26,571 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:14:01] 2025-10-12 13:13:27,314 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:14:01] 2025-10-12 13:13:55,416 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:14:01] 2025-10-12 13:13:55,964 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134782818379584)>', '<ExcThread(monitor, started 134782105151232)>']
[2025-10-12 09:14:01] 2025-10-12 13:13:56,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:14:01] 2025-10-12 13:13:56,378 | INFO     | [monitor] control thread has ended
[2025-10-12 09:14:01] 2025-10-12 13:14:00,988 | INFO     | all workflow threads have been joined
[2025-10-12 09:14:01] 2025-10-12 13:14:00,989 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:14:01] 2025-10-12 13:14:00,989 | INFO     | traces error code: 0
[2025-10-12 09:14:01] 2025-10-12 13:14:00,989 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:14:01] 2025-10-12 13:14:01,133 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:14:01] 2025-10-12 13:14:01,136 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:14:01] 2025-10-12 13:14:01,139 [wrapper] pilotpid: 413770
[2025-10-12 09:14:01] 2025-10-12 13:14:01,142 [wrapper] Pilot exit status: 0
[2025-10-12 09:14:01] 2025-10-12 13:14:01,154 [wrapper] pandaids: 6838990024
[2025-10-12 09:14:01] 2025-10-12 13:14:01,220 [wrapper] cleanup supervisor_pilot  940288 413771
[2025-10-12 09:14:01] 2025-10-12 13:14:01,223 [wrapper] Test setup, not cleaning
[2025-10-12 09:14:01] 2025-10-12 13:14:01,229 [wrapper] apfmon messages muted
[2025-10-12 09:14:01] 2025-10-12 13:14:01,233 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:14:01] 2025-10-12 13:14:01,236 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:14:01]  *** Error codes and diagnostics ***
[2025-10-12 09:14:01]     "exeErrorCode": 0,
[2025-10-12 09:14:01]     "exeErrorDiag": "",
[2025-10-12 09:14:01]     "pilotErrorCode": 0,
[2025-10-12 09:14:01]     "pilotErrorDiag": "",
[2025-10-12 09:14:01]  *** Listing of results directory ***
[2025-10-12 09:14:01] total 418972
[2025-10-12 09:14:01] -rw-r--r-- 1 whitlerd whitlerd    557409 Oct 11 17:39 pilot3.tar.gz
[2025-10-12 09:14:01] -rwx------ 1 whitlerd whitlerd     36292 Oct 11 18:02 runpilot2-wrapper.sh
[2025-10-12 09:14:01] -rw-r--r-- 1 whitlerd whitlerd      5112 Oct 11 18:02 queuedata.json
[2025-10-12 09:14:01] -rw-rw-r-- 1 whitlerd whitlerd       100 Oct 12 05:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:14:01] -rwxr-xr-x 1 whitlerd whitlerd      7986 Oct 12 05:32 run_atlas
[2025-10-12 09:14:01] -rw-rw-r-- 1 whitlerd whitlerd       105 Oct 12 05:32 job.xml
[2025-10-12 09:14:01] -rw-r--r-- 2 whitlerd whitlerd 220574621 Oct 12 05:32 EVNT.46676267._002641.pool.root.1
[2025-10-12 09:14:01] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 12 05:32 start_atlas.sh
[2025-10-12 09:14:01] drwxrwx--x 2 whitlerd whitlerd      4096 Oct 12 05:32 shared
[2025-10-12 09:14:01] -rw-r--r-- 2 whitlerd whitlerd    569676 Oct 12 05:32 input.tar.gz
[2025-10-12 09:14:01] -rw-rw-r-- 1 whitlerd whitlerd      8957 Oct 12 05:32 init_data.xml
[2025-10-12 09:14:01] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 12 05:32 boinc_setup_complete
[2025-10-12 09:14:01] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct 12 05:32 boinc_lockfile
[2025-10-12 09:14:01] -rw-rw-r-- 1 whitlerd whitlerd      2550 Oct 12 05:32 pandaJob.out
[2025-10-12 09:14:01] -rw------- 1 whitlerd whitlerd    975536 Oct 12 05:32 agis_schedconf.cvmfs.json
[2025-10-12 09:14:01] drwx------ 5 whitlerd whitlerd      4096 Oct 12 05:32 pilot3
[2025-10-12 09:14:01] -rw------- 1 whitlerd whitlerd        95 Oct 12 09:12 pilot_heartbeat.json
[2025-10-12 09:14:01] -rw-rw-r-- 1 whitlerd whitlerd       530 Oct 12 09:12 boinc_task_state.xml
[2025-10-12 09:14:01] -rw------- 1 whitlerd whitlerd 200032994 Oct 12 09:12 HITS.46676269._065745.pool.root.1
[2025-10-12 09:14:01] -rw------- 1 whitlerd whitlerd      1033 Oct 12 09:13 memory_monitor_summary.json
[2025-10-12 09:14:01] -rw------- 1 whitlerd whitlerd   1560580 Oct 12 09:13 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:14:01] -rw------- 1 whitlerd whitlerd    389015 Oct 12 09:13 log.46676269._065745.job.log.tgz.1
[2025-10-12 09:14:01] -rw------- 1 whitlerd whitlerd      7787 Oct 12 09:13 heartbeat.json
[2025-10-12 09:14:01] -rw-rw-r-- 1 whitlerd whitlerd        28 Oct 12 09:13 wrapper_checkpoint.txt
[2025-10-12 09:14:01] -rw-rw-r-- 1 whitlerd whitlerd      8192 Oct 12 09:13 boinc_mmap_file
[2025-10-12 09:14:01] -rw------- 1 whitlerd whitlerd      4568 Oct 12 09:14 pilotlog.txt
[2025-10-12 09:14:01] -rw------- 1 whitlerd whitlerd   1865867 Oct 12 09:14 log.46676269._065745.job.log.1
[2025-10-12 09:14:01] -rw------- 1 whitlerd whitlerd       357 Oct 12 09:14 output.list
[2025-10-12 09:14:01] -rw-rw-r-- 1 whitlerd whitlerd       620 Oct 12 09:14 runtime_log
[2025-10-12 09:14:01] -rw------- 1 whitlerd whitlerd   2273280 Oct 12 09:14 result.tar.gz
[2025-10-12 09:14:01] -rw-rw-r-- 1 whitlerd whitlerd      8893 Oct 12 09:14 runtime_log.err
[2025-10-12 09:14:01] -rw------- 1 whitlerd whitlerd       650 Oct 12 09:14 Kt0MDmpqwR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUkhNDmfVwKYo.diag
[2025-10-12 09:14:01] -rw-rw-r-- 1 whitlerd whitlerd     21067 Oct 12 09:14 stderr.txt
[2025-10-12 09:14:01] HITS file was successfully produced:
[2025-10-12 09:14:01] -rw------- 1 whitlerd whitlerd 200032994 Oct 12 09:12 shared/HITS.pool.root.1
[2025-10-12 09:14:01]  *** Contents of shared directory: ***
[2025-10-12 09:14:01] total 413560
[2025-10-12 09:14:01] -rw-r--r-- 2 whitlerd whitlerd 220574621 Oct 12 05:32 ATLAS.root_0
[2025-10-12 09:14:01] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct 12 05:32 start_atlas.sh
[2025-10-12 09:14:01] -rw-r--r-- 2 whitlerd whitlerd    569676 Oct 12 05:32 input.tar.gz
[2025-10-12 09:14:01] -rw------- 1 whitlerd whitlerd 200032994 Oct 12 09:12 HITS.pool.root.1
[2025-10-12 09:14:01] -rw------- 1 whitlerd whitlerd   2273280 Oct 12 09:14 result.tar.gz
09:14:03 (409740): run_atlas exited; CPU time 50632.896663
09:14:03 (409740): called boinc_finish(0)

</stderr_txt>
]]>

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