Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
11:31:31 (2453139): wrapper (7.7.26015): starting
11:31:31 (2453139): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 11:31:31] Arguments: --nthreads 8
[2025-10-12 11:31:31] Threads: 8
[2025-10-12 11:31:31] Checking for CVMFS
[2025-10-12 11:31:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:31:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:31:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:31:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:31:40] 2.13.2.0 2453422 0 25504 151615 3 1 2456781 4096000 0 130560 0 0 0.000 1291 205 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 11:31:40] CVMFS is ok
[2025-10-12 11:31:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:31:40] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 11:31:40] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 11:31:40] Further information can be found at the LHC@home message board.
[2025-10-12 11:31:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:31:40] Checking for apptainer binary...
[2025-10-12 11:31:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:31:40] Running /usr/bin/apptainer --version
[2025-10-12 11:31:40] apptainer version 1.4.3
[2025-10-12 11:31:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:31:40] 9570
[2025-10-12 11:31:40] apptainer works
[2025-10-12 11:31:40] Set ATHENA_PROC_NUMBER=8
[2025-10-12 11:31:40] Set ATHENA_CORE_NUMBER=8
[2025-10-12 11:31:40] Starting ATLAS job with PandaID=6838990930
[2025-10-12 11:31:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:21:27]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:21:27] 2025-10-12 14:20:27,881 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:21:27] 2025-10-12 14:20:27,881 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:21:27] 2025-10-12 14:20:27,885 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:21:27] 2025-10-12 14:20:27,885 | INFO     | sum of square deviations: 7102775035.0
[2025-10-12 16:21:27] 2025-10-12 14:20:27,887 | INFO     | sum of deviations: -14680335304.5
[2025-10-12 16:21:27] 2025-10-12 14:20:27,887 | INFO     | mean x: 1760270169.5
[2025-10-12 16:21:27] 2025-10-12 14:20:27,887 | INFO     | mean y: 2509677.1725352113
[2025-10-12 16:21:27] 2025-10-12 14:20:27,887 | INFO     | -- intersect: 3640715334.4588566
[2025-10-12 16:21:27] 2025-10-12 14:20:27,887 | INFO     | intersect: 3640715334.4588566
[2025-10-12 16:21:27] 2025-10-12 14:20:27,887 | INFO     | chi2: 2.110455141858103
[2025-10-12 16:21:27] 2025-10-12 14:20:27,888 | INFO     | sum of square deviations: 6734191380.0
[2025-10-12 16:21:27] 2025-10-12 14:20:27,889 | INFO     | sum of deviations: 5402380697.999997
[2025-10-12 16:21:27] 2025-10-12 14:20:27,889 | INFO     | mean x: 1760270017.0
[2025-10-12 16:21:27] 2025-10-12 14:20:27,889 | INFO     | mean y: 2517870.301075269
[2025-10-12 16:21:27] 2025-10-12 14:20:27,889 | INFO     | -- intersect: -1409626250.1276681
[2025-10-12 16:21:27] 2025-10-12 14:20:27,889 | INFO     | intersect: -1409626250.1276681
[2025-10-12 16:21:27] 2025-10-12 14:20:27,889 | INFO     | chi2: 1.2657615732094607
[2025-10-12 16:21:27] 2025-10-12 14:20:27,889 | INFO     | current chi2=1.2657615732094607 (change=40.024237042297464 %)
[2025-10-12 16:21:27] 2025-10-12 14:20:27,890 | INFO     | sum of square deviations: 6378584712.5
[2025-10-12 16:21:27] 2025-10-12 14:20:27,891 | INFO     | sum of deviations: 5354753850.000001
[2025-10-12 16:21:27] 2025-10-12 14:20:27,891 | INFO     | mean x: 1760269864.5
[2025-10-12 16:21:27] 2025-10-12 14:20:27,891 | INFO     | mean y: 2517849.9124087594
[2025-10-12 16:21:27] 2025-10-12 14:20:27,891 | INFO     | -- intersect: -1475209931.2204118
[2025-10-12 16:21:27] 2025-10-12 14:20:27,891 | INFO     | intersect: -1475209931.2204118
[2025-10-12 16:21:27] 2025-10-12 14:20:27,891 | INFO     | chi2: 1.2659387241528595
[2025-10-12 16:21:27] 2025-10-12 14:20:27,891 | INFO     | current chi2=1.2659387241528595 (change=-0.013995601316097747 %)
[2025-10-12 16:21:27] 2025-10-12 14:20:27,891 | INFO     | right removable region: 273
[2025-10-12 16:21:27] 2025-10-12 14:20:27,892 | INFO     | sum of square deviations: 6734191380.0
[2025-10-12 16:21:27] 2025-10-12 14:20:27,893 | INFO     | sum of deviations: -49235458870.0
[2025-10-12 16:21:27] 2025-10-12 14:20:27,893 | INFO     | mean x: 1760270322.0
[2025-10-12 16:21:27] 2025-10-12 14:20:27,893 | INFO     | mean y: 2523840.70609319
[2025-10-12 16:21:27] 2025-10-12 14:20:27,893 | INFO     | -- intersect: 12872326931.884748
[2025-10-12 16:21:27] 2025-10-12 14:20:27,893 | INFO     | intersect: 12872326931.884748
[2025-10-12 16:21:27] 2025-10-12 14:20:27,893 | INFO     | chi2: 0.9583596854788289
[2025-10-12 16:21:27] 2025-10-12 14:20:27,893 | INFO     | current chi2=0.9583596854788289 (change=54.58990497021118 %)
[2025-10-12 16:21:27] 2025-10-12 14:20:27,894 | INFO     | sum of square deviations: 6378584712.5
[2025-10-12 16:21:27] 2025-10-12 14:20:27,895 | INFO     | sum of deviations: -47047293039.0
[2025-10-12 16:21:27] 2025-10-12 14:20:27,895 | INFO     | mean x: 1760270474.5
[2025-10-12 16:21:27] 2025-10-12 14:20:27,895 | INFO     | mean y: 2522885.6204379564
[2025-10-12 16:21:27] 2025-10-12 14:20:27,895 | INFO     | -- intersect: 12985961152.01331
[2025-10-12 16:21:27] 2025-10-12 14:20:27,895 | INFO     | intersect: 12985961152.01331
[2025-10-12 16:21:27] 2025-10-12 14:20:27,895 | INFO     | chi2: 0.9480900299641608
[2025-10-12 16:21:27] 2025-10-12 14:20:27,895 | INFO     | current chi2=0.9480900299641608 (change=1.071586761241632 %)
[2025-10-12 16:21:27] 2025-10-12 14:20:27,895 | INFO     | left removable region: 20
[2025-10-12 16:21:27] 2025-10-12 14:20:27,895 | INFO     | sum of square deviations: 5021496942.0
[2025-10-12 16:21:27] 2025-10-12 14:20:27,897 | INFO     | sum of deviations: -15167729178.0
[2025-10-12 16:21:27] 2025-10-12 14:20:27,897 | INFO     | mean x: 1760270444.0
[2025-10-12 16:21:27] 2025-10-12 14:20:27,897 | INFO     | mean y: 2526328.9446640317
[2025-10-12 16:21:27] 2025-10-12 14:20:27,897 | INFO     | -- intersect: 5319527550.495904
[2025-10-12 16:21:27] 2025-10-12 14:20:27,897 | INFO     | intersect: 5319527550.495904
[2025-10-12 16:21:27] 2025-10-12 14:20:27,897 | INFO     | chi2: 0.06885185263140413
[2025-10-12 16:21:27] 2025-10-12 14:20:27,897 | INFO     | -- intersect: 5319527550.495904
[2025-10-12 16:21:27] 2025-10-12 14:20:27,897 | INFO     | current memory leak: -3.02 B/s (using 253 data points, chi2=0.07)
[2025-10-12 16:21:27] 2025-10-12 14:20:27,898 | INFO     | could have reported an average CPU frequency of 2396 MHz (13 samples)
[2025-10-12 16:21:27] 2025-10-12 14:20:27,898 | INFO     | ..............................
[2025-10-12 16:21:27] 2025-10-12 14:20:27,898 | INFO     | . Timing measurements:
[2025-10-12 16:21:27] 2025-10-12 14:20:27,898 | INFO     | . get job = 0 s
[2025-10-12 16:21:27] 2025-10-12 14:20:27,898 | INFO     | . initial setup = 1 s
[2025-10-12 16:21:27] 2025-10-12 14:20:27,898 | INFO     | . payload setup = 4 s
[2025-10-12 16:21:27] 2025-10-12 14:20:27,898 | INFO     | . stage-in = 0 s
[2025-10-12 16:21:27] 2025-10-12 14:20:27,898 | INFO     | . payload execution = 17287 s
[2025-10-12 16:21:27] 2025-10-12 14:20:27,898 | INFO     | . stage-out = 1 s
[2025-10-12 16:21:27] 2025-10-12 14:20:27,898 | INFO     | . log creation = 0 s
[2025-10-12 16:21:27] 2025-10-12 14:20:27,898 | INFO     | ..............................
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | 
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | job summary report
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | --------------------------------------------------
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | PanDA job id: 6838990930
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | task id: 46676269
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | errors: (none)
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | pilot state: finished 
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | transexitcode: 0
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | exeerrorcode: 0
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | exeerrordiag: 
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | exitcode: 0
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | exitmsg: OK
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | cpuconsumptiontime: 25286 s
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | nevents: 400
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | neventsw: 0
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | pid: 2473747
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | pgrp: 2473747
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | corecount: 8
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | event service: False
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | sizes: {0: 2348864, 1: 2348892, 4: 2349154, 11: 2349182, 17295: 2381206, 17298: 2390402, 17301: 2390540}
[2025-10-12 16:21:27] 2025-10-12 14:20:27,954 | INFO     | --------------------------------------------------
[2025-10-12 16:21:27] 2025-10-12 14:20:27,955 | INFO     | 
[2025-10-12 16:21:27] 2025-10-12 14:20:27,955 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-10-12 16:21:27] 2025-10-12 14:20:27,973 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,973 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,973 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,973 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,973 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,973 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,974 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,974 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,974 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,974 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,974 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,974 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,974 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,974 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,974 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,974 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,974 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,974 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:21:27] 2025-10-12 14:20:27,974 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,974 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:21:27] 2025-10-12 14:20:27,974 | INFO     | job 6838990930 has completed (purged errors)
[2025-10-12 16:21:27] 2025-10-12 14:20:27,974 | INFO     | overall cleanup function is called
[2025-10-12 16:21:27] 2025-10-12 14:20:28,982 | INFO     | --- collectZombieJob: --- 10, [2473747]
[2025-10-12 16:21:27] 2025-10-12 14:20:28,982 | INFO     | zombie collector waiting for pid 2473747
[2025-10-12 16:21:27] 2025-10-12 14:20:28,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:21:27] 2025-10-12 14:20:28,983 | INFO     | collected zombie processes
[2025-10-12 16:21:27] 2025-10-12 14:20:28,983 | INFO     | will attempt to kill all subprocesses of pid=2473747
[2025-10-12 16:21:27] 2025-10-12 14:20:29,014 | INFO     | process IDs to be killed: [2473747] (in reverse order)
[2025-10-12 16:21:27] 2025-10-12 14:20:29,048 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:21:27] 2025-10-12 14:20:29,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:21:27] 2025-10-12 14:20:29,050 | INFO     | did not find any defunct processes belonging to 2473747
[2025-10-12 16:21:27] 2025-10-12 14:20:29,051 | INFO     | did not find any defunct processes belonging to 2473747
[2025-10-12 16:21:27] 2025-10-12 14:20:29,052 | INFO     | ready for new job
[2025-10-12 16:21:27] 2025-10-12 14:20:29,052 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:21:27] 2025-10-12 14:20:29,054 | INFO     | ***************************************
[2025-10-12 16:21:27] 2025-10-12 14:20:29,054 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:21:27] 2025-10-12 14:20:29,054 | INFO     | ***************************************
[2025-10-12 16:21:27] 2025-10-12 14:20:29,054 | INFO     | 
[2025-10-12 16:21:27] 2025-10-12 14:20:29,054 | INFO     | pilot is running in a VM
[2025-10-12 16:21:27] 2025-10-12 14:20:29,054 | INFO     | architecture information:
[2025-10-12 16:21:27] 2025-10-12 14:20:29,055 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:21:27] 2025-10-12 14:20:29,070 | INFO     | cat /etc/os-release:
[2025-10-12 16:21:27] NAME="CentOS Linux"
[2025-10-12 16:21:27] VERSION="7 (Core)"
[2025-10-12 16:21:27] ID="centos"
[2025-10-12 16:21:27] ID_LIKE="rhel fedora"
[2025-10-12 16:21:27] VERSION_ID="7"
[2025-10-12 16:21:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:21:27] ANSI_COLOR="0;31"
[2025-10-12 16:21:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:21:27] HOME_URL="https://www.centos.org/"
[2025-10-12 16:21:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:21:27] 
[2025-10-12 16:21:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:21:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:21:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:21:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:21:27] 
[2025-10-12 16:21:27] 2025-10-12 14:20:29,071 | INFO     | ***************************************
[2025-10-12 16:21:27] 2025-10-12 14:20:29,573 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-10-12 16:21:27] 2025-10-12 14:20:29,590 | INFO     | sufficient remaining disk space (57410584576 B)
[2025-10-12 16:21:27] 2025-10-12 14:20:29,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:21:27] 2025-10-12 14:20:29,591 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:21:27] 2025-10-12 14:20:29,591 | INFO     | update_server=False
[2025-10-12 16:21:27] 2025-10-12 14:20:29,591 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:21:27] 2025-10-12 14:20:29,591 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:21:27] 2025-10-12 14:20:29,712 | INFO     | all job control threads have been joined
[2025-10-12 16:21:27] 2025-10-12 14:20:30,212 | INFO     | all data control threads have been joined
[2025-10-12 16:21:27] 2025-10-12 14:20:30,300 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:21:27] 2025-10-12 14:20:30,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:21:27] 2025-10-12 14:20:30,474 | INFO     | aborting loop
[2025-10-12 16:21:27] 2025-10-12 14:20:30,526 | INFO     | all payload control threads have been joined
[2025-10-12 16:21:27] 2025-10-12 14:20:30,596 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:21:27] 2025-10-12 14:20:30,596 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:21:27] 2025-10-12 14:20:30,717 | INFO     | [job] control thread has finished
[2025-10-12 16:21:27] 2025-10-12 14:20:30,791 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:21:27] 2025-10-12 14:20:30,817 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:21:27] 2025-10-12 14:20:30,837 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:21:27] 2025-10-12 14:20:30,890 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:21:27] 2025-10-12 14:20:31,217 | INFO     | [data] control thread has finished
[2025-10-12 16:21:27] 2025-10-12 14:20:31,235 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:21:27] 2025-10-12 14:20:31,360 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:21:27] 2025-10-12 14:20:31,461 | INFO     | [job] validate thread has finished
[2025-10-12 16:21:27] 2025-10-12 14:20:31,462 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:21:27] 2025-10-12 14:20:31,479 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:21:27] 2025-10-12 14:20:31,532 | INFO     | [payload] control thread has finished
[2025-10-12 16:21:27] 2025-10-12 14:20:32,306 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:21:27] 2025-10-12 14:20:34,843 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:21:27] 2025-10-12 14:20:40,239 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:21:27] 2025-10-12 14:20:41,244 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:21:27] 2025-10-12 14:21:00,086 | INFO     | PID=2461064 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:21:27] 2025-10-12 14:21:00,087 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:21:27] 2025-10-12 14:21:00,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:21:27] 2025-10-12 14:21:00,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:21:27] 2025-10-12 14:21:21,640 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:21:27] 2025-10-12 14:21:21,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130539750520640)>', '<ExcThread(monitor, started 130538736178944)>']
[2025-10-12 16:21:27] 2025-10-12 14:21:22,194 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:21:27] 2025-10-12 14:21:22,194 | INFO     | [monitor] control thread has ended
[2025-10-12 16:21:27] 2025-10-12 14:21:26,855 | INFO     | all workflow threads have been joined
[2025-10-12 16:21:27] 2025-10-12 14:21:26,856 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:21:27] 2025-10-12 14:21:26,856 | INFO     | traces error code: 0
[2025-10-12 16:21:27] 2025-10-12 14:21:26,856 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:21:27] 2025-10-12 14:21:26,981 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:21:27] 2025-10-12 14:21:26,984 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:21:27] 2025-10-12 14:21:26,987 [wrapper] pilotpid: 2461064
[2025-10-12 16:21:27] 2025-10-12 14:21:26,990 [wrapper] Pilot exit status: 0
[2025-10-12 16:21:27] 2025-10-12 14:21:27,001 [wrapper] pandaids: 6838990930
[2025-10-12 16:21:27] 2025-10-12 14:21:27,021 [wrapper] cleanup supervisor_pilot 2534610 2461065
[2025-10-12 16:21:27] 2025-10-12 14:21:27,025 [wrapper] Test setup, not cleaning
[2025-10-12 16:21:27] 2025-10-12 14:21:27,028 [wrapper] apfmon messages muted
[2025-10-12 16:21:27] 2025-10-12 14:21:27,030 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:21:27] 2025-10-12 14:21:27,033 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:21:27]  *** Error codes and diagnostics ***
[2025-10-12 16:21:27]     "exeErrorCode": 0,
[2025-10-12 16:21:27]     "exeErrorDiag": "",
[2025-10-12 16:21:27]     "pilotErrorCode": 0,
[2025-10-12 16:21:27]     "pilotErrorDiag": "",
[2025-10-12 16:21:27]  *** Listing of results directory ***
[2025-10-12 16:21:27] total 413140
[2025-10-12 16:21:27] -rw-r--r-- 1 boinc boinc    557409 Oct 12 00:51 pilot3.tar.gz
[2025-10-12 16:21:27] -rw-r--r-- 1 boinc boinc      5112 Oct 12 01:01 queuedata.json
[2025-10-12 16:21:27] -rwx------ 1 boinc boinc     36292 Oct 12 01:01 runpilot2-wrapper.sh
[2025-10-12 16:21:27] -rw-r--r-- 1 boinc boinc       100 Oct 12 11:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:21:27] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 11:31 run_atlas
[2025-10-12 16:21:27] -rw-r--r-- 1 boinc boinc       105 Oct 12 11:31 job.xml
[2025-10-12 16:21:27] -rw-r--r-- 2 boinc boinc 218970941 Oct 12 11:31 EVNT.46676267._002676.pool.root.1
[2025-10-12 16:21:27] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:31 start_atlas.sh
[2025-10-12 16:21:27] drwxrwx--x 2 boinc boinc      4096 Oct 12 11:31 shared
[2025-10-12 16:21:27] -rw-r--r-- 2 boinc boinc    569680 Oct 12 11:31 input.tar.gz
[2025-10-12 16:21:27] -rw-r--r-- 1 boinc boinc      6410 Oct 12 11:31 init_data.xml
[2025-10-12 16:21:27] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:31 boinc_setup_complete
[2025-10-12 16:21:27] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:31 boinc_lockfile
[2025-10-12 16:21:27] -rw-r--r-- 1 boinc boinc      2550 Oct 12 11:31 pandaJob.out
[2025-10-12 16:21:27] -rw------- 1 boinc boinc    975536 Oct 12 11:31 agis_schedconf.cvmfs.json
[2025-10-12 16:21:27] drwx------ 5 boinc boinc      4096 Oct 12 11:31 pilot3
[2025-10-12 16:21:27] -rw------- 1 boinc boinc 194273303 Oct 12 16:19 HITS.46676269._066419.pool.root.1
[2025-10-12 16:21:27] -rw-r--r-- 1 boinc boinc       530 Oct 12 16:20 boinc_task_state.xml
[2025-10-12 16:21:27] -rw------- 1 boinc boinc      1011 Oct 12 16:20 memory_monitor_summary.json
[2025-10-12 16:21:27] -rw------- 1 boinc boinc   1560580 Oct 12 16:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:21:27] -rw------- 1 boinc boinc    501672 Oct 12 16:20 log.46676269._066419.job.log.tgz.1
[2025-10-12 16:21:27] -rw------- 1 boinc boinc      7710 Oct 12 16:20 heartbeat.json
[2025-10-12 16:21:27] -rw------- 1 boinc boinc        95 Oct 12 16:21 pilot_heartbeat.json
[2025-10-12 16:21:27] -rw-r--r-- 1 boinc boinc      8192 Oct 12 16:21 boinc_mmap_file
[2025-10-12 16:21:27] -rw-r--r-- 1 boinc boinc        28 Oct 12 16:21 wrapper_checkpoint.txt
[2025-10-12 16:21:27] -rw------- 1 boinc boinc      4889 Oct 12 16:21 pilotlog.txt
[2025-10-12 16:21:27] -rw------- 1 boinc boinc   2449872 Oct 12 16:21 log.46676269._066419.job.log.1
[2025-10-12 16:21:27] -rw------- 1 boinc boinc       357 Oct 12 16:21 output.list
[2025-10-12 16:21:27] -rw-r--r-- 1 boinc boinc       620 Oct 12 16:21 runtime_log
[2025-10-12 16:21:27] -rw------- 1 boinc boinc   2969600 Oct 12 16:21 result.tar.gz
[2025-10-12 16:21:27] -rw-r--r-- 1 boinc boinc      8735 Oct 12 16:21 runtime_log.err
[2025-10-12 16:21:27] -rw------- 1 boinc boinc       642 Oct 12 16:21 ptoMDmHmxR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1shNDmg4LRFo.diag
[2025-10-12 16:21:27] -rw-r--r-- 1 boinc boinc     20912 Oct 12 16:21 stderr.txt
[2025-10-12 16:21:27] HITS file was successfully produced:
[2025-10-12 16:21:27] -rw------- 1 boinc boinc 194273303 Oct 12 16:19 shared/HITS.pool.root.1
[2025-10-12 16:21:27]  *** Contents of shared directory: ***
[2025-10-12 16:21:27] total 407048
[2025-10-12 16:21:27] -rw-r--r-- 2 boinc boinc 218970941 Oct 12 11:31 ATLAS.root_0
[2025-10-12 16:21:27] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:31 start_atlas.sh
[2025-10-12 16:21:27] -rw-r--r-- 2 boinc boinc    569680 Oct 12 11:31 input.tar.gz
[2025-10-12 16:21:27] -rw------- 1 boinc boinc 194273303 Oct 12 16:19 HITS.pool.root.1
[2025-10-12 16:21:27] -rw------- 1 boinc boinc   2969600 Oct 12 16:21 result.tar.gz
16:21:28 (2453139): run_atlas exited; CPU time 25266.520549
16:21:28 (2453139): called boinc_finish(0)

</stderr_txt>
]]>

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