Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
10:14:04 (2695305): wrapper (7.7.26015): starting
10:14:04 (2695305): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 10:14:04] Arguments: --nthreads 12
[2025-10-12 10:14:04] Threads: 12
[2025-10-12 10:14:04] Checking for CVMFS
[2025-10-12 10:14:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:14:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:14:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:14:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:14:05] 2.11.0.0 3299214 2927 85800 151617 3 9 5349904 6144001 14768 130560 0 57281053 100.000 106108 199 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 10:14:05] CVMFS is ok
[2025-10-12 10:14:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:14:05] Checking for apptainer binary...
[2025-10-12 10:14:05] apptainer is not installed, using version from CVMFS
[2025-10-12 10:14:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:14:05] radiat0r
[2025-10-12 10:14:05] apptainer works
[2025-10-12 10:14:05] Set ATHENA_PROC_NUMBER=12
[2025-10-12 10:14:05] Set ATHENA_CORE_NUMBER=12
[2025-10-12 10:14:05] Starting ATLAS job with PandaID=6832421594
[2025-10-12 10:14:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:58:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:58:30] 2025-10-12 10:57:37,766 | INFO     |  -- lfn=log.46376905._106306.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 10:58:30] 2025-10-12 10:57:37,766 | INFO     | stage-out finished correctly
[2025-10-12 10:58:30] 2025-10-12 10:57:38,967 | INFO     | time since job start (2598s) is within the limit (172800.0s)
[2025-10-12 10:58:30] 2025-10-12 10:57:39,490 | INFO     | monitor loop #184: job 0:6832421594 is in state 'finished'
[2025-10-12 10:58:30] 2025-10-12 10:57:39,491 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:58:30] 2025-10-12 10:57:40,909 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 10:58:30] 2025-10-12 10:57:40,976 | INFO     | time since job start (2600s) is within the limit (172800.0s)
[2025-10-12 10:58:30] 2025-10-12 10:57:41,994 | INFO     | monitor loop #185: job 0:6832421594 is in state 'finished'
[2025-10-12 10:58:30] 2025-10-12 10:57:41,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:58:30] 2025-10-12 10:57:42,591 | INFO     | job 6832421594 has state=finished
[2025-10-12 10:58:30] 2025-10-12 10:57:42,591 | INFO     | preparing for final server update for job 6832421594 in state='finished'
[2025-10-12 10:58:30] 2025-10-12 10:57:42,592 | INFO     | this job has now completed (state=finished)
[2025-10-12 10:58:30] 2025-10-12 10:57:42,592 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 10:58:30] 2025-10-12 10:57:42,592 | INFO     | log transfer has been attempted: DONE
[2025-10-12 10:58:30] 2025-10-12 10:57:42,592 | INFO     | job 6832421594 has finished - writing final server update
[2025-10-12 10:58:30] 2025-10-12 10:57:42,592 | INFO     | total number of processed events: 400 (read)
[2025-10-12 10:58:30] 2025-10-12 10:57:42,595 | INFO     | executing command: lscpu
[2025-10-12 10:58:30] 2025-10-12 10:57:42,799 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 10:58:30] 2025-10-12 10:57:42,995 | INFO     | time since job start (2602s) is within the limit (172800.0s)
[2025-10-12 10:58:30] 2025-10-12 10:57:44,498 | INFO     | monitor loop #186: job 0:6832421594 is in state 'finished'
[2025-10-12 10:58:30] 2025-10-12 10:57:44,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:58:30] 2025-10-12 10:57:44,999 | INFO     | time since job start (2604s) is within the limit (172800.0s)
[2025-10-12 10:58:30] 2025-10-12 10:57:47,002 | INFO     | monitor loop #187: job 0:6832421594 is in state 'finished'
[2025-10-12 10:58:30] 2025-10-12 10:57:47,003 | INFO     | time since job start (2607s) is within the limit (172800.0s)
[2025-10-12 10:58:30] 2025-10-12 10:57:47,003 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:58:30] 2025-10-12 10:57:49,007 | INFO     | time since job start (2609s) is within the limit (172800.0s)
[2025-10-12 10:58:30] 2025-10-12 10:57:49,506 | INFO     | monitor loop #188: job 0:6832421594 is in state 'finished'
[2025-10-12 10:58:30] 2025-10-12 10:57:49,507 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:58:30] 2025-10-12 10:57:51,013 | INFO     | time since job start (2611s) is within the limit (172800.0s)
[2025-10-12 10:58:30] 2025-10-12 10:57:52,010 | INFO     | monitor loop #189: job 0:6832421594 is in state 'finished'
[2025-10-12 10:58:30] 2025-10-12 10:57:52,010 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:58:30] 2025-10-12 10:57:53,019 | INFO     | time since job start (2613s) is within the limit (172800.0s)
[2025-10-12 10:58:30] 2025-10-12 10:57:54,514 | INFO     | monitor loop #190: job 0:6832421594 is in state 'finished'
[2025-10-12 10:58:30] 2025-10-12 10:57:54,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:58:30] 2025-10-12 10:57:55,025 | INFO     | time since job start (2615s) is within the limit (172800.0s)
[2025-10-12 10:58:30] 2025-10-12 10:57:55,415 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 10:58:30] 2025-10-12 10:57:55,482 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2412.42384375
[2025-10-12 10:58:30] 2025-10-12 10:57:55,560 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6832421594/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:58:30] 2025-10-12 10:57:55,561 | INFO     | extracted standard info from prmon json
[2025-10-12 10:58:30] 2025-10-12 10:57:55,562 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:58:30] 2025-10-12 10:57:55,562 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:58:30] 2025-10-12 10:57:55,562 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:58:30] 2025-10-12 10:57:55,562 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:58:30] 2025-10-12 10:57:55,564 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:58:30] 2025-10-12 10:57:55,564 | INFO     | sum of square deviations: 13283970.0
[2025-10-12 10:58:30] 2025-10-12 10:57:55,564 | INFO     | sum of deviations: -47597263.0
[2025-10-12 10:58:30] 2025-10-12 10:57:55,564 | INFO     | mean x: 1760265437.0
[2025-10-12 10:58:30] 2025-10-12 10:57:55,564 | INFO     | mean y: 2685778.1142857145
[2025-10-12 10:58:30] 2025-10-12 10:57:55,564 | INFO     | -- intersect: 6309822647.190242
[2025-10-12 10:58:30] 2025-10-12 10:57:55,564 | INFO     | intersect: 6309822647.190242
[2025-10-12 10:58:30] 2025-10-12 10:57:55,565 | INFO     | chi2: 0.00022699755668409638
[2025-10-12 10:58:30] 2025-10-12 10:57:55,565 | INFO     | -- intersect: 6309822647.190242
[2025-10-12 10:58:30] 2025-10-12 10:57:55,565 | INFO     | current memory leak: -3.58 B/s (using 35 data points, chi2=0.00)
[2025-10-12 10:58:30] 2025-10-12 10:57:55,565 | INFO     | could have reported an average CPU frequency of 2372 MHz (5 samples)
[2025-10-12 10:58:30] 2025-10-12 10:57:55,565 | INFO     | ..............................
[2025-10-12 10:58:30] 2025-10-12 10:57:55,565 | INFO     | . Timing measurements:
[2025-10-12 10:58:30] 2025-10-12 10:57:55,566 | INFO     | . get job = 0 s
[2025-10-12 10:58:30] 2025-10-12 10:57:55,566 | INFO     | . initial setup = 2 s
[2025-10-12 10:58:30] 2025-10-12 10:57:55,566 | INFO     | . payload setup = 8 s
[2025-10-12 10:58:30] 2025-10-12 10:57:55,566 | INFO     | . stage-in = 0 s
[2025-10-12 10:58:30] 2025-10-12 10:57:55,566 | INFO     | . payload execution = 2564 s
[2025-10-12 10:58:30] 2025-10-12 10:57:55,566 | INFO     | . stage-out = 0 s
[2025-10-12 10:58:30] 2025-10-12 10:57:55,566 | INFO     | . log creation = 0 s
[2025-10-12 10:58:30] 2025-10-12 10:57:55,566 | INFO     | ..............................
[2025-10-12 10:58:30] 2025-10-12 10:57:55,671 | INFO     | 
[2025-10-12 10:58:30] 2025-10-12 10:57:55,672 | INFO     | job summary report
[2025-10-12 10:58:30] 2025-10-12 10:57:55,672 | INFO     | --------------------------------------------------
[2025-10-12 10:58:30] 2025-10-12 10:57:55,672 | INFO     | PanDA job id: 6832421594
[2025-10-12 10:58:30] 2025-10-12 10:57:55,672 | INFO     | task id: 46376905
[2025-10-12 10:58:30] 2025-10-12 10:57:55,672 | INFO     | errors: (none)
[2025-10-12 10:58:30] 2025-10-12 10:57:55,672 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:58:30] 2025-10-12 10:57:55,672 | INFO     | pilot state: finished 
[2025-10-12 10:58:30] 2025-10-12 10:57:55,672 | INFO     | transexitcode: 0
[2025-10-12 10:58:30] 2025-10-12 10:57:55,672 | INFO     | exeerrorcode: 0
[2025-10-12 10:58:30] 2025-10-12 10:57:55,673 | INFO     | exeerrordiag: 
[2025-10-12 10:58:30] 2025-10-12 10:57:55,673 | INFO     | exitcode: 0
[2025-10-12 10:58:30] 2025-10-12 10:57:55,673 | INFO     | exitmsg: OK
[2025-10-12 10:58:30] 2025-10-12 10:57:55,673 | INFO     | cpuconsumptiontime: 26998 s
[2025-10-12 10:58:30] 2025-10-12 10:57:55,673 | INFO     | nevents: 400
[2025-10-12 10:58:30] 2025-10-12 10:57:55,673 | INFO     | neventsw: 0
[2025-10-12 10:58:30] 2025-10-12 10:57:55,673 | INFO     | pid: 2708116
[2025-10-12 10:58:30] 2025-10-12 10:57:55,673 | INFO     | pgrp: 2708116
[2025-10-12 10:58:30] 2025-10-12 10:57:55,673 | INFO     | corecount: 12
[2025-10-12 10:58:30] 2025-10-12 10:57:55,673 | INFO     | event service: False
[2025-10-12 10:58:30] 2025-10-12 10:57:55,673 | INFO     | sizes: {0: 2348646, 1: 2348845, 8: 2349107, 12: 2349135, 2578: 2374409, 2579: 2383409, 2582: 2383593, 2597: 2383819}
[2025-10-12 10:58:30] 2025-10-12 10:57:55,673 | INFO     | --------------------------------------------------
[2025-10-12 10:58:30] 2025-10-12 10:57:55,674 | INFO     | 
[2025-10-12 10:58:30] 2025-10-12 10:57:55,674 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-10-12 10:58:30] 2025-10-12 10:57:55,709 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,709 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,709 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,709 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,709 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,710 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,710 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,710 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,710 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,711 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,711 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,711 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,711 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,711 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:58:30] 2025-10-12 10:57:55,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,711 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:58:30] 2025-10-12 10:57:55,711 | INFO     | job 6832421594 has completed (purged errors)
[2025-10-12 10:58:30] 2025-10-12 10:57:55,712 | INFO     | overall cleanup function is called
[2025-10-12 10:58:30] 2025-10-12 10:57:56,722 | INFO     | --- collectZombieJob: --- 10, [2708116]
[2025-10-12 10:58:30] 2025-10-12 10:57:56,722 | INFO     | zombie collector waiting for pid 2708116
[2025-10-12 10:58:30] 2025-10-12 10:57:56,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:58:30] 2025-10-12 10:57:56,722 | INFO     | collected zombie processes
[2025-10-12 10:58:30] 2025-10-12 10:57:56,722 | INFO     | will attempt to kill all subprocesses of pid=2708116
[2025-10-12 10:58:30] 2025-10-12 10:57:57,571 | INFO     | process IDs to be killed: [2708116] (in reverse order)
[2025-10-12 10:58:30] 2025-10-12 10:57:57,855 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:58:30] 2025-10-12 10:57:57,855 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:58:30] 2025-10-12 10:57:57,886 | INFO     | did not find any defunct processes belonging to 2708116
[2025-10-12 10:58:30] 2025-10-12 10:57:57,915 | INFO     | did not find any defunct processes belonging to 2708116
[2025-10-12 10:58:30] 2025-10-12 10:57:57,915 | INFO     | ready for new job
[2025-10-12 10:58:30] 2025-10-12 10:57:57,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:58:30] 2025-10-12 10:57:57,918 | INFO     | ***************************************
[2025-10-12 10:58:30] 2025-10-12 10:57:57,918 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 10:58:30] 2025-10-12 10:57:57,919 | INFO     | ***************************************
[2025-10-12 10:58:30] 2025-10-12 10:57:57,919 | INFO     | 
[2025-10-12 10:58:30] 2025-10-12 10:57:57,958 | INFO     | architecture information:
[2025-10-12 10:58:30] 2025-10-12 10:57:57,959 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:58:30] 2025-10-12 10:57:57,983 | INFO     | cat /etc/os-release:
[2025-10-12 10:58:30] NAME="CentOS Linux"
[2025-10-12 10:58:30] VERSION="7 (Core)"
[2025-10-12 10:58:30] ID="centos"
[2025-10-12 10:58:30] ID_LIKE="rhel fedora"
[2025-10-12 10:58:30] VERSION_ID="7"
[2025-10-12 10:58:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:58:30] ANSI_COLOR="0;31"
[2025-10-12 10:58:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:58:30] HOME_URL="https://www.centos.org/"
[2025-10-12 10:58:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:58:30] 
[2025-10-12 10:58:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:58:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:58:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:58:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:58:30] 
[2025-10-12 10:58:30] 2025-10-12 10:57:57,984 | INFO     | ***************************************
[2025-10-12 10:58:30] 2025-10-12 10:57:58,487 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-10-12 10:58:30] 2025-10-12 10:57:58,517 | INFO     | sufficient remaining disk space (1724828876800 B)
[2025-10-12 10:58:30] 2025-10-12 10:57:58,517 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:58:30] 2025-10-12 10:57:58,518 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:58:30] 2025-10-12 10:57:58,518 | INFO     | update_server=False
[2025-10-12 10:58:30] 2025-10-12 10:57:58,518 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:58:30] 2025-10-12 10:57:58,518 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:58:30] 2025-10-12 10:57:58,519 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:58:30] 2025-10-12 10:57:58,519 | INFO     | aborting loop
[2025-10-12 10:58:30] 2025-10-12 10:57:58,833 | INFO     | all payload control threads have been joined
[2025-10-12 10:58:30] 2025-10-12 10:57:58,931 | INFO     | all data control threads have been joined
[2025-10-12 10:58:30] 2025-10-12 10:57:59,450 | INFO     | all job control threads have been joined
[2025-10-12 10:58:30] 2025-10-12 10:57:59,522 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:58:30] 2025-10-12 10:57:59,525 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:58:30] 2025-10-12 10:57:59,544 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:58:30] 2025-10-12 10:57:59,635 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:58:30] 2025-10-12 10:57:59,690 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:58:30] 2025-10-12 10:57:59,737 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:58:30] 2025-10-12 10:57:59,745 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:58:30] 2025-10-12 10:57:59,839 | INFO     | [payload] control thread has finished
[2025-10-12 10:58:30] 2025-10-12 10:57:59,934 | INFO     | [data] control thread has finished
[2025-10-12 10:58:30] 2025-10-12 10:58:00,379 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:58:30] 2025-10-12 10:58:00,454 | INFO     | [job] control thread has finished
[2025-10-12 10:58:30] 2025-10-12 10:58:00,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:58:30] 2025-10-12 10:58:00,522 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:58:30] 2025-10-12 10:58:00,678 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:58:30] 2025-10-12 10:58:00,771 | INFO     | [job] validate thread has finished
[2025-10-12 10:58:30] 2025-10-12 10:58:01,682 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:58:30] 2025-10-12 10:58:04,526 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:58:30] 2025-10-12 10:58:08,846 | INFO     | job.realtimelogging is not enabled
[2025-10-12 10:58:30] 2025-10-12 10:58:09,852 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:58:30] 2025-10-12 10:58:24,126 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:58:30] 2025-10-12 10:58:25,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139926568736576)>', '<ExcThread(monitor, started 139925974398720)>']
[2025-10-12 10:58:30] 2025-10-12 10:58:29,154 | INFO     | PID=2700004 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:58:30] 2025-10-12 10:58:29,154 | INFO     | .. there are 17 such processes running
[2025-10-12 10:58:30] 2025-10-12 10:58:29,156 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:58:30] 2025-10-12 10:58:29,156 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:58:30] 2025-10-12 10:58:29,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:58:30] 2025-10-12 10:58:29,156 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:58:30] 2025-10-12 10:58:29,156 | INFO     | [monitor] control thread has ended
[2025-10-12 10:58:30] 2025-10-12 10:58:30,371 | INFO     | all workflow threads have been joined
[2025-10-12 10:58:30] 2025-10-12 10:58:30,371 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:58:30] 2025-10-12 10:58:30,372 | INFO     | traces error code: 0
[2025-10-12 10:58:30] 2025-10-12 10:58:30,372 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:58:30] 2025-10-12 10:58:30,584 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:58:30] 2025-10-12 10:58:30,588 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:58:30] 2025-10-12 10:58:30,591 [wrapper] pilotpid: 2700004
[2025-10-12 10:58:30] 2025-10-12 10:58:30,594 [wrapper] Pilot exit status: 0
[2025-10-12 10:58:30] 2025-10-12 10:58:30,609 [wrapper] pandaids: 6832421594
[2025-10-12 10:58:30] 2025-10-12 10:58:30,797 [wrapper] cleanup supervisor_pilot 3013760 2700005
[2025-10-12 10:58:30] 2025-10-12 10:58:30,801 [wrapper] Test setup, not cleaning
[2025-10-12 10:58:30] 2025-10-12 10:58:30,805 [wrapper] apfmon messages muted
[2025-10-12 10:58:30] 2025-10-12 10:58:30,809 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:58:30] 2025-10-12 10:58:30,812 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:58:30]  *** Error codes and diagnostics ***
[2025-10-12 10:58:30]     "exeErrorCode": 0,
[2025-10-12 10:58:30]     "exeErrorDiag": "",
[2025-10-12 10:58:30]     "pilotErrorCode": 0,
[2025-10-12 10:58:30]     "pilotErrorDiag": "",
[2025-10-12 10:58:30]  *** Listing of results directory ***
[2025-10-12 10:58:30] total 380324
[2025-10-12 10:58:30] -rw-r--r-- 1 boinc boinc    552446 Oct  6 05:28 pilot3.tar.gz
[2025-10-12 10:58:30] -rwx------ 1 boinc boinc     36292 Oct  6 05:39 runpilot2-wrapper.sh
[2025-10-12 10:58:30] -rw-r--r-- 1 boinc boinc      5112 Oct  6 05:39 queuedata.json
[2025-10-12 10:58:30] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:58:30] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:14 run_atlas
[2025-10-12 10:58:30] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:14 job.xml
[2025-10-12 10:58:30] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:14 start_atlas.sh
[2025-10-12 10:58:30] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:14 shared
[2025-10-12 10:58:30] -rw-r--r-- 2 boinc boinc    565601 Oct 12 10:14 input.tar.gz
[2025-10-12 10:58:30] -rw-r--r-- 1 boinc boinc      9396 Oct 12 10:14 init_data.xml
[2025-10-12 10:58:30] -rw-r--r-- 2 boinc boinc 212682397 Oct 12 10:14 EVNT.46376901._003937.pool.root.1
[2025-10-12 10:58:30] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:14 boinc_setup_complete
[2025-10-12 10:58:30] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:14 boinc_lockfile
[2025-10-12 10:58:30] -rw-r--r-- 1 boinc boinc      2519 Oct 12 10:14 pandaJob.out
[2025-10-12 10:58:30] -rw------- 1 boinc boinc    975520 Oct 12 10:14 agis_schedconf.cvmfs.json
[2025-10-12 10:58:30] -rw------- 1 boinc boinc   1560580 Oct 12 10:14 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:58:30] drwx------ 4 boinc boinc      4096 Oct 12 10:14 pilot3
[2025-10-12 10:58:30] -rw------- 1 boinc boinc 171369167 Oct 12 10:57 HITS.46376905._106306.pool.root.1
[2025-10-12 10:58:30] -rw-r--r-- 1 boinc boinc       529 Oct 12 10:57 boinc_task_state.xml
[2025-10-12 10:58:30] -rw------- 1 boinc boinc      1030 Oct 12 10:57 memory_monitor_summary.json
[2025-10-12 10:58:30] -rw------- 1 boinc boinc    352357 Oct 12 10:57 log.46376905._106306.job.log.tgz.1
[2025-10-12 10:58:30] -rw------- 1 boinc boinc      7742 Oct 12 10:57 heartbeat.json
[2025-10-12 10:58:30] -rw-r--r-- 1 boinc boinc      8192 Oct 12 10:58 boinc_mmap_file
[2025-10-12 10:58:30] -rw-r--r-- 1 boinc boinc        27 Oct 12 10:58 wrapper_checkpoint.txt
[2025-10-12 10:58:30] -rw------- 1 boinc boinc        95 Oct 12 10:58 pilot_heartbeat.json
[2025-10-12 10:58:30] -rw------- 1 boinc boinc      4899 Oct 12 10:58 pilotlog.txt
[2025-10-12 10:58:30] -rw------- 1 boinc boinc    395733 Oct 12 10:58 log.46376905._106306.job.log.1
[2025-10-12 10:58:30] -rw------- 1 boinc boinc       357 Oct 12 10:58 output.list
[2025-10-12 10:58:30] -rw-r--r-- 1 boinc boinc       620 Oct 12 10:58 runtime_log
[2025-10-12 10:58:30] -rw------- 1 boinc boinc    768000 Oct 12 10:58 result.tar.gz
[2025-10-12 10:58:30] -rw-r--r-- 1 boinc boinc      8672 Oct 12 10:58 runtime_log.err
[2025-10-12 10:58:30] -rw------- 1 boinc boinc       643 Oct 12 10:58 D1IKDmI7sP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVcIMDm58JKsm.diag
[2025-10-12 10:58:30] -rw-r--r-- 1 boinc boinc     21854 Oct 12 10:58 stderr.txt
[2025-10-12 10:58:30] HITS file was successfully produced:
[2025-10-12 10:58:30] -rw------- 1 boinc boinc 171369167 Oct 12 10:57 shared/HITS.pool.root.1
[2025-10-12 10:58:30]  *** Contents of shared directory: ***
[2025-10-12 10:58:30] total 376388
[2025-10-12 10:58:30] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:14 start_atlas.sh
[2025-10-12 10:58:30] -rw-r--r-- 2 boinc boinc    565601 Oct 12 10:14 input.tar.gz
[2025-10-12 10:58:30] -rw-r--r-- 2 boinc boinc 212682397 Oct 12 10:14 ATLAS.root_0
[2025-10-12 10:58:30] -rw------- 1 boinc boinc 171369167 Oct 12 10:57 HITS.pool.root.1
[2025-10-12 10:58:30] -rw------- 1 boinc boinc    768000 Oct 12 10:58 result.tar.gz
10:58:32 (2695305): run_atlas exited; CPU time 27156.388776
10:58:32 (2695305): called boinc_finish(0)

</stderr_txt>
]]>

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