Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
14:20:21 (1985014): wrapper (7.7.26015): starting
14:20:21 (1985014): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 14:20:21] Arguments: --nthreads 8
[2025-10-12 14:20:21] Threads: 8
[2025-10-12 14:20:21] Checking for CVMFS
[2025-10-12 14:20:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:20:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:20:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:20:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:20:22] 2.13.2.0 8166 1570 61960 151620 1 57 3221640 4096001 2733 130560 0 5087743 99.997 60244 358 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 14:20:22] CVMFS is ok
[2025-10-12 14:20:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:20:22] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 14:20:22] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 14:20:22] Further information can be found at the LHC@home message board.
[2025-10-12 14:20:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:20:22] Checking for apptainer binary...
[2025-10-12 14:20:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:20:22] Running /usr/bin/apptainer --version
[2025-10-12 14:20:22] apptainer version 1.4.2
[2025-10-12 14:20:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:20:22] JM7
[2025-10-12 14:20:22] apptainer works
[2025-10-12 14:20:22] Set ATHENA_PROC_NUMBER=8
[2025-10-12 14:20:22] Set ATHENA_CORE_NUMBER=8
[2025-10-12 14:20:22] Starting ATLAS job with PandaID=6826211788
[2025-10-12 14:20:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:03:51]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:03:51] 2025-10-12 14:02:47,874 | INFO     | chi2: 1.7579272712006584
[2025-10-12 16:03:51] 2025-10-12 14:02:47,874 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 16:03:51] 2025-10-12 14:02:47,875 | INFO     | sum of deviations: 6599710109.000002
[2025-10-12 16:03:51] 2025-10-12 14:02:47,875 | INFO     | mean x: 1760274532.0
[2025-10-12 16:03:51] 2025-10-12 14:02:47,875 | INFO     | mean y: 2526685.6631578947
[2025-10-12 16:03:51] 2025-10-12 14:02:47,875 | INFO     | -- intersect: -43699758757.95882
[2025-10-12 16:03:51] 2025-10-12 14:02:47,875 | INFO     | intersect: -43699758757.95882
[2025-10-12 16:03:51] 2025-10-12 14:02:47,876 | INFO     | chi2: 1.7627090325226602
[2025-10-12 16:03:51] 2025-10-12 14:02:47,876 | INFO     | current chi2=1.7627090325226602 (change=-0.27201132836035263 %)
[2025-10-12 16:03:51] 2025-10-12 14:02:47,876 | INFO     | right removable region: 94
[2025-10-12 16:03:51] 2025-10-12 14:02:47,876 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 16:03:51] 2025-10-12 14:02:47,877 | INFO     | sum of deviations: -10830196200.0
[2025-10-12 16:03:51] 2025-10-12 14:02:47,877 | INFO     | mean x: 1760274837.0
[2025-10-12 16:03:51] 2025-10-12 14:02:47,877 | INFO     | mean y: 2585143.347368421
[2025-10-12 16:03:51] 2025-10-12 14:02:47,877 | INFO     | -- intersect: 71718524167.10579
[2025-10-12 16:03:51] 2025-10-12 14:02:47,877 | INFO     | intersect: 71718524167.10579
[2025-10-12 16:03:51] 2025-10-12 14:02:47,878 | INFO     | chi2: 0.06112875451819225
[2025-10-12 16:03:51] 2025-10-12 14:02:47,878 | INFO     | current chi2=0.06112875451819225 (change=96.52268011767964 %)
[2025-10-12 16:03:51] 2025-10-12 14:02:47,878 | INFO     | sum of square deviations: 226022842.5
[2025-10-12 16:03:51] 2025-10-12 14:02:47,879 | INFO     | sum of deviations: -9670637775.5
[2025-10-12 16:03:51] 2025-10-12 14:02:47,879 | INFO     | mean x: 1760274989.5
[2025-10-12 16:03:51] 2025-10-12 14:02:47,879 | INFO     | mean y: 2580484.855555556
[2025-10-12 16:03:51] 2025-10-12 14:02:47,879 | INFO     | -- intersect: 75317896496.451
[2025-10-12 16:03:51] 2025-10-12 14:02:47,879 | INFO     | intersect: 75317896496.451
[2025-10-12 16:03:51] 2025-10-12 14:02:47,880 | INFO     | chi2: 0.04535577819497284
[2025-10-12 16:03:51] 2025-10-12 14:02:47,880 | INFO     | current chi2=0.04535577819497284 (change=25.802875336721094 %)
[2025-10-12 16:03:51] 2025-10-12 14:02:47,880 | INFO     | sum of square deviations: 190403570.0
[2025-10-12 16:03:51] 2025-10-12 14:02:47,881 | INFO     | sum of deviations: -5398380623.0
[2025-10-12 16:03:51] 2025-10-12 14:02:47,881 | INFO     | mean x: 1760275142.0
[2025-10-12 16:03:51] 2025-10-12 14:02:47,881 | INFO     | mean y: 2562151.0588235296
[2025-10-12 16:03:51] 2025-10-12 14:02:47,881 | INFO     | -- intersect: 49910424791.03649
[2025-10-12 16:03:51] 2025-10-12 14:02:47,881 | INFO     | intersect: 49910424791.03649
[2025-10-12 16:03:51] 2025-10-12 14:02:47,881 | INFO     | chi2: 0.009696988972802656
[2025-10-12 16:03:51] 2025-10-12 14:02:47,882 | INFO     | current chi2=0.009696988972802656 (change=78.62016845765982 %)
[2025-10-12 16:03:51] 2025-10-12 14:02:47,882 | INFO     | sum of square deviations: 158737860.0
[2025-10-12 16:03:51] 2025-10-12 14:02:47,882 | INFO     | sum of deviations: -3998700121.0
[2025-10-12 16:03:51] 2025-10-12 14:02:47,882 | INFO     | mean x: 1760275294.5
[2025-10-12 16:03:51] 2025-10-12 14:02:47,883 | INFO     | mean y: 2555467.05
[2025-10-12 16:03:51] 2025-10-12 14:02:47,883 | INFO     | -- intersect: 44344926172.50402
[2025-10-12 16:03:51] 2025-10-12 14:02:47,883 | INFO     | intersect: 44344926172.50402
[2025-10-12 16:03:51] 2025-10-12 14:02:47,883 | INFO     | chi2: 0.007567997517816114
[2025-10-12 16:03:51] 2025-10-12 14:02:47,883 | INFO     | current chi2=0.007567997517816114 (change=21.955180736595334 %)
[2025-10-12 16:03:51] 2025-10-12 14:02:47,883 | INFO     | left removable region: 40
[2025-10-12 16:03:51] 2025-10-12 14:02:47,884 | INFO     | sum of square deviations: 48810217.5
[2025-10-12 16:03:51] 2025-10-12 14:02:47,884 | INFO     | sum of deviations: -1527688757.9999998
[2025-10-12 16:03:51] 2025-10-12 14:02:47,884 | INFO     | mean x: 1760275721.5
[2025-10-12 16:03:51] 2025-10-12 14:02:47,884 | INFO     | mean y: 2542073.962962963
[2025-10-12 16:03:51] 2025-10-12 14:02:47,884 | INFO     | -- intersect: 55096609841.96437
[2025-10-12 16:03:51] 2025-10-12 14:02:47,885 | INFO     | intersect: 55096609841.96437
[2025-10-12 16:03:51] 2025-10-12 14:02:47,885 | INFO     | chi2: 0.0064398489952216895
[2025-10-12 16:03:51] 2025-10-12 14:02:47,885 | INFO     | -- intersect: 55096609841.96437
[2025-10-12 16:03:51] 2025-10-12 14:02:47,885 | INFO     | current memory leak: -31.30 B/s (using 54 data points, chi2=0.01)
[2025-10-12 16:03:51] 2025-10-12 14:02:47,885 | INFO     | could have reported an average CPU frequency of 2195 MHz (7 samples)
[2025-10-12 16:03:51] 2025-10-12 14:02:47,886 | INFO     | ..............................
[2025-10-12 16:03:51] 2025-10-12 14:02:47,886 | INFO     | . Timing measurements:
[2025-10-12 16:03:51] 2025-10-12 14:02:47,886 | INFO     | . get job = 0 s
[2025-10-12 16:03:51] 2025-10-12 14:02:47,886 | INFO     | . initial setup = 2 s
[2025-10-12 16:03:51] 2025-10-12 14:02:47,886 | INFO     | . payload setup = 6 s
[2025-10-12 16:03:51] 2025-10-12 14:02:47,886 | INFO     | . stage-in = 0 s
[2025-10-12 16:03:51] 2025-10-12 14:02:47,886 | INFO     | . payload execution = 6099 s
[2025-10-12 16:03:51] 2025-10-12 14:02:47,887 | INFO     | . stage-out = 0 s
[2025-10-12 16:03:51] 2025-10-12 14:02:47,887 | INFO     | . log creation = 0 s
[2025-10-12 16:03:51] 2025-10-12 14:02:47,887 | INFO     | ..............................
[2025-10-12 16:03:51] 2025-10-12 14:02:47,906 | INFO     | time since job start (6131s) is within the limit (172800.0s)
[2025-10-12 16:03:51] 2025-10-12 14:02:48,198 | INFO     | 
[2025-10-12 16:03:51] 2025-10-12 14:02:48,199 | INFO     | job summary report
[2025-10-12 16:03:51] 2025-10-12 14:02:48,199 | INFO     | --------------------------------------------------
[2025-10-12 16:03:51] 2025-10-12 14:02:48,199 | INFO     | PanDA job id: 6826211788
[2025-10-12 16:03:51] 2025-10-12 14:02:48,199 | INFO     | task id: 46373048
[2025-10-12 16:03:51] 2025-10-12 14:02:48,199 | INFO     | errors: (none)
[2025-10-12 16:03:51] 2025-10-12 14:02:48,199 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:03:51] 2025-10-12 14:02:48,200 | INFO     | pilot state: finished 
[2025-10-12 16:03:51] 2025-10-12 14:02:48,200 | INFO     | transexitcode: 0
[2025-10-12 16:03:51] 2025-10-12 14:02:48,200 | INFO     | exeerrorcode: 0
[2025-10-12 16:03:51] 2025-10-12 14:02:48,200 | INFO     | exeerrordiag: 
[2025-10-12 16:03:51] 2025-10-12 14:02:48,200 | INFO     | exitcode: 0
[2025-10-12 16:03:51] 2025-10-12 14:02:48,200 | INFO     | exitmsg: OK
[2025-10-12 16:03:51] 2025-10-12 14:02:48,200 | INFO     | cpuconsumptiontime: 44832 s
[2025-10-12 16:03:51] 2025-10-12 14:02:48,201 | INFO     | nevents: 400
[2025-10-12 16:03:51] 2025-10-12 14:02:48,201 | INFO     | neventsw: 0
[2025-10-12 16:03:51] 2025-10-12 14:02:48,201 | INFO     | pid: 1995839
[2025-10-12 16:03:51] 2025-10-12 14:02:48,201 | INFO     | pgrp: 1995839
[2025-10-12 16:03:51] 2025-10-12 14:02:48,201 | INFO     | corecount: 8
[2025-10-12 16:03:51] 2025-10-12 14:02:48,201 | INFO     | event service: False
[2025-10-12 16:03:51] 2025-10-12 14:02:48,201 | INFO     | sizes: {0: 2348848, 6: 2349110, 11: 2349138, 6107: 2376016, 6108: 2385028, 6111: 2385084, 6115: 2385406}
[2025-10-12 16:03:51] 2025-10-12 14:02:48,201 | INFO     | --------------------------------------------------
[2025-10-12 16:03:51] 2025-10-12 14:02:48,202 | INFO     | 
[2025-10-12 16:03:51] 2025-10-12 14:02:48,202 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-10-12 16:03:51] 2025-10-12 14:02:48,220 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,221 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,221 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,221 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,221 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,221 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,221 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,222 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,222 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,222 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,223 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,223 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,223 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:03:51] 2025-10-12 14:02:48,223 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,223 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:03:51] 2025-10-12 14:02:48,223 | INFO     | job 6826211788 has completed (purged errors)
[2025-10-12 16:03:51] 2025-10-12 14:02:48,224 | INFO     | overall cleanup function is called
[2025-10-12 16:03:51] 2025-10-12 14:02:49,233 | INFO     | --- collectZombieJob: --- 10, [1995839]
[2025-10-12 16:03:51] 2025-10-12 14:02:49,233 | INFO     | zombie collector waiting for pid 1995839
[2025-10-12 16:03:51] 2025-10-12 14:02:49,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:03:51] 2025-10-12 14:02:49,234 | INFO     | collected zombie processes
[2025-10-12 16:03:51] 2025-10-12 14:02:49,234 | INFO     | will attempt to kill all subprocesses of pid=1995839
[2025-10-12 16:03:51] 2025-10-12 14:02:49,537 | INFO     | process IDs to be killed: [1995839] (in reverse order)
[2025-10-12 16:03:51] 2025-10-12 14:02:49,595 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:03:51] 2025-10-12 14:02:49,595 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:03:51] 2025-10-12 14:02:49,605 | INFO     | did not find any defunct processes belonging to 1995839
[2025-10-12 16:03:51] 2025-10-12 14:02:49,613 | INFO     | did not find any defunct processes belonging to 1995839
[2025-10-12 16:03:51] 2025-10-12 14:02:49,614 | INFO     | ready for new job
[2025-10-12 16:03:51] 2025-10-12 14:02:49,614 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:03:51] 2025-10-12 14:02:49,617 | INFO     | ***************************************
[2025-10-12 16:03:51] 2025-10-12 14:02:49,617 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 16:03:51] 2025-10-12 14:02:49,617 | INFO     | ***************************************
[2025-10-12 16:03:51] 2025-10-12 14:02:49,618 | INFO     | 
[2025-10-12 16:03:51] 2025-10-12 14:02:49,622 | INFO     | architecture information:
[2025-10-12 16:03:51] 2025-10-12 14:02:49,622 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:03:51] 2025-10-12 14:02:49,634 | INFO     | cat /etc/os-release:
[2025-10-12 16:03:51] NAME="CentOS Linux"
[2025-10-12 16:03:51] VERSION="7 (Core)"
[2025-10-12 16:03:51] ID="centos"
[2025-10-12 16:03:51] ID_LIKE="rhel fedora"
[2025-10-12 16:03:51] VERSION_ID="7"
[2025-10-12 16:03:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:03:51] ANSI_COLOR="0;31"
[2025-10-12 16:03:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:03:51] HOME_URL="https://www.centos.org/"
[2025-10-12 16:03:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:03:51] 
[2025-10-12 16:03:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:03:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:03:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:03:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:03:51] 
[2025-10-12 16:03:51] 2025-10-12 14:02:49,634 | INFO     | ***************************************
[2025-10-12 16:03:51] 2025-10-12 14:02:50,138 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-10-12 16:03:51] 2025-10-12 14:02:50,151 | INFO     | sufficient remaining disk space (216466980864 B)
[2025-10-12 16:03:51] 2025-10-12 14:02:50,151 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:03:51] 2025-10-12 14:02:50,152 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:03:51] 2025-10-12 14:02:50,152 | INFO     | update_server=False
[2025-10-12 16:03:51] 2025-10-12 14:02:50,152 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:03:51] 2025-10-12 14:02:50,152 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:03:51] 2025-10-12 14:02:50,153 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:03:51] 2025-10-12 14:02:50,153 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:03:51] 2025-10-12 14:02:50,153 | INFO     | aborting loop
[2025-10-12 16:03:51] 2025-10-12 14:02:50,663 | INFO     | all data control threads have been joined
[2025-10-12 16:03:51] 2025-10-12 14:02:50,924 | INFO     | all payload control threads have been joined
[2025-10-12 16:03:51] 2025-10-12 14:02:51,158 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:03:51] 2025-10-12 14:02:51,159 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:03:51] 2025-10-12 14:02:51,166 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:03:51] 2025-10-12 14:02:51,181 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:03:51] 2025-10-12 14:02:51,527 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:03:51] 2025-10-12 14:02:51,652 | INFO     | all job control threads have been joined
[2025-10-12 16:03:51] 2025-10-12 14:02:51,668 | INFO     | [data] control thread has finished
[2025-10-12 16:03:51] 2025-10-12 14:02:51,754 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:03:51] 2025-10-12 14:02:51,929 | INFO     | [payload] control thread has finished
[2025-10-12 16:03:51] 2025-10-12 14:02:52,159 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:03:51] 2025-10-12 14:02:52,399 | INFO     | [job] validate thread has finished
[2025-10-12 16:03:51] 2025-10-12 14:02:52,445 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:03:51] 2025-10-12 14:02:52,511 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:03:51] 2025-10-12 14:02:52,656 | INFO     | [job] control thread has finished
[2025-10-12 16:03:51] 2025-10-12 14:02:52,989 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:03:51] 2025-10-12 14:02:53,994 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:03:51] 2025-10-12 14:02:54,159 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:03:51] 2025-10-12 14:03:00,431 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:03:51] 2025-10-12 14:03:01,437 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:03:51] 2025-10-12 14:03:21,332 | INFO     | PID=1988988 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:03:51] 2025-10-12 14:03:21,332 | INFO     | .. there are 4 such processes running
[2025-10-12 16:03:51] 2025-10-12 14:03:21,332 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:03:51] 2025-10-12 14:03:21,332 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:03:51] 2025-10-12 14:03:21,332 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:03:51] 2025-10-12 14:03:45,725 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:03:51] 2025-10-12 14:03:46,268 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128221773244224)>', '<ExcThread(monitor, started 128221500643072)>']
[2025-10-12 16:03:51] 2025-10-12 14:03:46,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:03:51] 2025-10-12 14:03:46,457 | INFO     | [monitor] control thread has ended
[2025-10-12 16:03:51] 2025-10-12 14:03:51,293 | INFO     | all workflow threads have been joined
[2025-10-12 16:03:51] 2025-10-12 14:03:51,294 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:03:51] 2025-10-12 14:03:51,294 | INFO     | traces error code: 0
[2025-10-12 16:03:51] 2025-10-12 14:03:51,294 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:03:51] 2025-10-12 14:03:51,396 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:03:51] 2025-10-12 14:03:51,399 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:03:51] 2025-10-12 14:03:51,402 [wrapper] pilotpid: 1988988
[2025-10-12 16:03:51] 2025-10-12 14:03:51,405 [wrapper] Pilot exit status: 0
[2025-10-12 16:03:51] 2025-10-12 14:03:51,415 [wrapper] pandaids: 6826211788
[2025-10-12 16:03:51] 2025-10-12 14:03:51,452 [wrapper] cleanup supervisor_pilot 2084195 1988989
[2025-10-12 16:03:51] 2025-10-12 14:03:51,455 [wrapper] Test setup, not cleaning
[2025-10-12 16:03:51] 2025-10-12 14:03:51,458 [wrapper] apfmon messages muted
[2025-10-12 16:03:51] 2025-10-12 14:03:51,460 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:03:51] 2025-10-12 14:03:51,463 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:03:51]  *** Error codes and diagnostics ***
[2025-10-12 16:03:51]     "exeErrorCode": 0,
[2025-10-12 16:03:51]     "exeErrorDiag": "",
[2025-10-12 16:03:51]     "pilotErrorCode": 0,
[2025-10-12 16:03:51]     "pilotErrorDiag": "",
[2025-10-12 16:03:51]  *** Listing of results directory ***
[2025-10-12 16:03:51] total 421172
[2025-10-12 16:03:51] -rw-r--r-- 1 josemi7 josemi7    552446 oct  1 01:23 pilot3.tar.gz
[2025-10-12 16:03:51] -rw-r--r-- 1 josemi7 josemi7      5112 oct  1 01:25 queuedata.json
[2025-10-12 16:03:51] -rwx------ 1 josemi7 josemi7     36292 oct  1 01:28 runpilot2-wrapper.sh
[2025-10-12 16:03:51] -rw-rw-r-- 1 josemi7 josemi7       100 oct 12 14:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:03:51] -rwxr-xr-x 1 josemi7 josemi7      7986 oct 12 14:20 run_atlas
[2025-10-12 16:03:51] -rw-rw-r-- 1 josemi7 josemi7       105 oct 12 14:20 job.xml
[2025-10-12 16:03:51] -rw-r--r-- 2 josemi7 josemi7 220132519 oct 12 14:20 EVNT.46373045._002408.pool.root.1
[2025-10-12 16:03:51] -rw-r--r-- 2 josemi7 josemi7     15120 oct 12 14:20 start_atlas.sh
[2025-10-12 16:03:51] drwxrwx--x 1 josemi7 josemi7        76 oct 12 14:20 shared
[2025-10-12 16:03:51] -rw-r--r-- 2 josemi7 josemi7    565606 oct 12 14:20 input.tar.gz
[2025-10-12 16:03:51] -rw-rw-r-- 1 josemi7 josemi7      6165 oct 12 14:20 init_data.xml
[2025-10-12 16:03:51] -rw-rw-r-- 1 josemi7 josemi7         0 oct 12 14:20 boinc_setup_complete
[2025-10-12 16:03:51] -rw-rw-r-- 1 josemi7 josemi7         0 oct 12 14:20 boinc_lockfile
[2025-10-12 16:03:51] -rw-rw-r-- 1 josemi7 josemi7      2538 oct 12 14:20 pandaJob.out
[2025-10-12 16:03:51] -rw------- 1 josemi7 josemi7    975512 oct 12 14:20 agis_schedconf.cvmfs.json
[2025-10-12 16:03:51] -rw------- 1 josemi7 josemi7   1560580 oct 12 14:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:03:51] drwx------ 1 josemi7 josemi7       368 oct 12 14:20 pilot3
[2025-10-12 16:03:51] -rw------- 1 josemi7 josemi7 204783842 oct 12 16:02 HITS.46373048._072940.pool.root.1
[2025-10-12 16:03:51] -rw-rw-r-- 1 josemi7 josemi7       529 oct 12 16:02 boinc_task_state.xml
[2025-10-12 16:03:51] -rw------- 1 josemi7 josemi7      1030 oct 12 16:02 memory_monitor_summary.json
[2025-10-12 16:03:51] -rw------- 1 josemi7 josemi7    357125 oct 12 16:02 log.46373048._072940.job.log.tgz.1
[2025-10-12 16:03:51] -rw------- 1 josemi7 josemi7      7775 oct 12 16:02 heartbeat.json
[2025-10-12 16:03:51] -rw------- 1 josemi7 josemi7        95 oct 12 16:02 pilot_heartbeat.json
[2025-10-12 16:03:51] -rw-rw-r-- 1 josemi7 josemi7        27 oct 12 16:03 wrapper_checkpoint.txt
[2025-10-12 16:03:51] -rw-rw-r-- 1 josemi7 josemi7      8192 oct 12 16:03 boinc_mmap_file
[2025-10-12 16:03:51] -rw------- 1 josemi7 josemi7      4903 oct 12 16:03 pilotlog.txt
[2025-10-12 16:03:51] -rw------- 1 josemi7 josemi7    886894 oct 12 16:03 log.46373048._072940.job.log.1
[2025-10-12 16:03:51] -rw------- 1 josemi7 josemi7       357 oct 12 16:03 output.list
[2025-10-12 16:03:51] -rw-rw-r-- 1 josemi7 josemi7       620 oct 12 16:03 runtime_log
[2025-10-12 16:03:51] -rw------- 1 josemi7 josemi7   1259520 oct 12 16:03 result.tar.gz
[2025-10-12 16:03:51] -rw-rw-r-- 1 josemi7 josemi7      8729 oct 12 16:03 runtime_log.err
[2025-10-12 16:03:51] -rw------- 1 josemi7 josemi7       637 oct 12 16:03 gDTMDm8wyN8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJKANDmUgXnUm.diag
[2025-10-12 16:03:51] -rw-rw-r-- 1 josemi7 josemi7     20957 oct 12 16:03 stderr.txt
[2025-10-12 16:03:51] HITS file was successfully produced:
[2025-10-12 16:03:51] -rw------- 1 josemi7 josemi7 204783842 oct 12 16:02 shared/HITS.pool.root.1
[2025-10-12 16:03:51]  *** Contents of shared directory: ***
[2025-10-12 16:03:51] total 416768
[2025-10-12 16:03:51] -rw-r--r-- 2 josemi7 josemi7 220132519 oct 12 14:20 ATLAS.root_0
[2025-10-12 16:03:51] -rw-r--r-- 2 josemi7 josemi7     15120 oct 12 14:20 start_atlas.sh
[2025-10-12 16:03:51] -rw-r--r-- 2 josemi7 josemi7    565606 oct 12 14:20 input.tar.gz
[2025-10-12 16:03:51] -rw------- 1 josemi7 josemi7 204783842 oct 12 16:02 HITS.pool.root.1
[2025-10-12 16:03:51] -rw------- 1 josemi7 josemi7   1259520 oct 12 16:03 result.tar.gz
16:03:52 (1985014): run_atlas exited; CPU time 45048.493319
16:03:52 (1985014): called boinc_finish(0)

</stderr_txt>
]]>

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