Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
03:36:33 (26026): wrapper (7.7.26015): starting
03:36:33 (26026): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 03:36:33] Arguments: --nthreads 4
[2025-10-12 03:36:33] Threads: 4
[2025-10-12 03:36:33] Checking for CVMFS
[2025-10-12 03:36:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 03:36:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 03:36:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 03:36:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 03:36:33] 2.11.3.0 1528564 4256 67436 151615 1 188 2789044 4096000 5517 130560 0 18631805 99.998 143464 679 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 03:36:33] CVMFS is ok
[2025-10-12 03:36:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 03:36:33] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 03:36:33] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 03:36:33] Further information can be found at the LHC@home message board.
[2025-10-12 03:36:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:36:33] Checking for apptainer binary...
[2025-10-12 03:36:33] apptainer is not installed, using version from CVMFS
[2025-10-12 03:36:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:36:33] officedc-System-Product-Name
[2025-10-12 03:36:33] apptainer works
[2025-10-12 03:36:33] Set ATHENA_PROC_NUMBER=4
[2025-10-12 03:36:33] Set ATHENA_CORE_NUMBER=4
[2025-10-12 03:36:33] Starting ATLAS job with PandaID=6839083897
[2025-10-12 03:36:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:30:22]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:30:22] 2025-10-12 11:29:48,991 | INFO     | time since job start (6785s) is within the limit (172800.0s)
[2025-10-12 05:30:22] 2025-10-12 11:29:50,617 | INFO     | monitor loop #507: job 0:6839083897 is in state 'finished'
[2025-10-12 05:30:22] 2025-10-12 11:29:50,618 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 05:30:22] 2025-10-12 11:29:50,719 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 05:30:22] 2025-10-12 11:29:50,724 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3943.85965625
[2025-10-12 05:30:22] 2025-10-12 11:29:50,728 | INFO     | using path: /var/lib/boinc3/slots/3/PanDA_Pilot-6839083897/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:30:22] 2025-10-12 11:29:50,728 | INFO     | extracted standard info from prmon json
[2025-10-12 05:30:22] 2025-10-12 11:29:50,728 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 05:30:22] 2025-10-12 11:29:50,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 05:30:22] 2025-10-12 11:29:50,728 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:30:22] 2025-10-12 11:29:50,729 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:30:22] 2025-10-12 11:29:50,730 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:30:22] 2025-10-12 11:29:50,730 | INFO     | sum of square deviations: 424045160.0
[2025-10-12 05:30:22] 2025-10-12 11:29:50,731 | INFO     | sum of deviations: 2644002483.000002
[2025-10-12 05:30:22] 2025-10-12 11:29:50,731 | INFO     | mean x: 1760265180.0
[2025-10-12 05:30:22] 2025-10-12 11:29:50,731 | INFO     | mean y: 2320511.261261261
[2025-10-12 05:30:22] 2025-10-12 11:29:50,731 | INFO     | -- intersect: -10973268755.359411
[2025-10-12 05:30:22] 2025-10-12 11:29:50,731 | INFO     | intersect: -10973268755.359411
[2025-10-12 05:30:22] 2025-10-12 11:29:50,731 | INFO     | chi2: 1.4034681789346297
[2025-10-12 05:30:22] 2025-10-12 11:29:50,731 | INFO     | sum of square deviations: 369281342.5
[2025-10-12 05:30:22] 2025-10-12 11:29:50,732 | INFO     | sum of deviations: 2636709170.499998
[2025-10-12 05:30:22] 2025-10-12 11:29:50,732 | INFO     | mean x: 1760265027.5
[2025-10-12 05:30:22] 2025-10-12 11:29:50,732 | INFO     | mean y: 2320490.933962264
[2025-10-12 05:30:22] 2025-10-12 11:29:50,732 | INFO     | -- intersect: -12566164310.108164
[2025-10-12 05:30:22] 2025-10-12 11:29:50,732 | INFO     | intersect: -12566164310.108164
[2025-10-12 05:30:22] 2025-10-12 11:29:50,732 | INFO     | chi2: 1.4052777251479525
[2025-10-12 05:30:22] 2025-10-12 11:29:50,732 | INFO     | current chi2=1.4052777251479525 (change=-0.12893389679104567 %)
[2025-10-12 05:30:22] 2025-10-12 11:29:50,732 | INFO     | right removable region: 105
[2025-10-12 05:30:22] 2025-10-12 11:29:50,732 | INFO     | sum of square deviations: 369281342.5
[2025-10-12 05:30:22] 2025-10-12 11:29:50,733 | INFO     | sum of deviations: -9811083351.999998
[2025-10-12 05:30:22] 2025-10-12 11:29:50,733 | INFO     | mean x: 1760265332.5
[2025-10-12 05:30:22] 2025-10-12 11:29:50,733 | INFO     | mean y: 2354186.4716981133
[2025-10-12 05:30:22] 2025-10-12 11:29:50,733 | INFO     | -- intersect: 46769162880.01811
[2025-10-12 05:30:22] 2025-10-12 11:29:50,733 | INFO     | intersect: 46769162880.01811
[2025-10-12 05:30:22] 2025-10-12 11:29:50,733 | INFO     | chi2: 0.049900060544600215
[2025-10-12 05:30:22] 2025-10-12 11:29:50,733 | INFO     | current chi2=0.049900060544600215 (change=96.44451785273256 %)
[2025-10-12 05:30:22] 2025-10-12 11:29:50,733 | INFO     | sum of square deviations: 319447850.0
[2025-10-12 05:30:22] 2025-10-12 11:29:50,734 | INFO     | sum of deviations: -7731326050.0
[2025-10-12 05:30:22] 2025-10-12 11:29:50,734 | INFO     | mean x: 1760265485.0
[2025-10-12 05:30:22] 2025-10-12 11:29:50,734 | INFO     | mean y: 2347807.6534653464
[2025-10-12 05:30:22] 2025-10-12 11:29:50,734 | INFO     | -- intersect: 42604564097.71892
[2025-10-12 05:30:22] 2025-10-12 11:29:50,734 | INFO     | intersect: 42604564097.71892
[2025-10-12 05:30:22] 2025-10-12 11:29:50,734 | INFO     | chi2: 0.04755957587762626
[2025-10-12 05:30:22] 2025-10-12 11:29:50,734 | INFO     | current chi2=0.04755957587762626 (change=4.690344343133709 %)
[2025-10-12 05:30:22] 2025-10-12 11:29:50,734 | INFO     | left removable region: 20
[2025-10-12 05:30:22] 2025-10-12 11:29:50,734 | INFO     | sum of square deviations: 190403570.0
[2025-10-12 05:30:22] 2025-10-12 11:29:50,735 | INFO     | sum of deviations: -2945894715.9999995
[2025-10-12 05:30:22] 2025-10-12 11:29:50,735 | INFO     | mean x: 1760265607.0
[2025-10-12 05:30:22] 2025-10-12 11:29:50,735 | INFO     | mean y: 2332069.223529412
[2025-10-12 05:30:22] 2025-10-12 11:29:50,735 | INFO     | -- intersect: 27236890488.573715
[2025-10-12 05:30:22] 2025-10-12 11:29:50,735 | INFO     | intersect: 27236890488.573715
[2025-10-12 05:30:22] 2025-10-12 11:29:50,735 | INFO     | chi2: 0.028935030038052884
[2025-10-12 05:30:22] 2025-10-12 11:29:50,735 | INFO     | -- intersect: 27236890488.573715
[2025-10-12 05:30:22] 2025-10-12 11:29:50,735 | INFO     | current memory leak: -15.47 B/s (using 85 data points, chi2=0.03)
[2025-10-12 05:30:22] 2025-10-12 11:29:50,735 | INFO     | could have reported an average CPU frequency of 3991 MHz (7 samples)
[2025-10-12 05:30:22] 2025-10-12 11:29:50,736 | INFO     | ..............................
[2025-10-12 05:30:22] 2025-10-12 11:29:50,736 | INFO     | . Timing measurements:
[2025-10-12 05:30:22] 2025-10-12 11:29:50,736 | INFO     | . get job = 0 s
[2025-10-12 05:30:22] 2025-10-12 11:29:50,736 | INFO     | . initial setup = 2 s
[2025-10-12 05:30:22] 2025-10-12 11:29:50,736 | INFO     | . payload setup = 4 s
[2025-10-12 05:30:22] 2025-10-12 11:29:50,736 | INFO     | . stage-in = 0 s
[2025-10-12 05:30:22] 2025-10-12 11:29:50,736 | INFO     | . payload execution = 6762 s
[2025-10-12 05:30:22] 2025-10-12 11:29:50,736 | INFO     | . stage-out = 0 s
[2025-10-12 05:30:22] 2025-10-12 11:29:50,736 | INFO     | . log creation = 0 s
[2025-10-12 05:30:22] 2025-10-12 11:29:50,736 | INFO     | ..............................
[2025-10-12 05:30:22] 2025-10-12 11:29:50,803 | INFO     | 
[2025-10-12 05:30:22] 2025-10-12 11:29:50,803 | INFO     | job summary report
[2025-10-12 05:30:22] 2025-10-12 11:29:50,803 | INFO     | --------------------------------------------------
[2025-10-12 05:30:22] 2025-10-12 11:29:50,803 | INFO     | PanDA job id: 6839083897
[2025-10-12 05:30:22] 2025-10-12 11:29:50,803 | INFO     | task id: 46676269
[2025-10-12 05:30:22] 2025-10-12 11:29:50,803 | INFO     | errors: (none)
[2025-10-12 05:30:22] 2025-10-12 11:29:50,803 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:30:22] 2025-10-12 11:29:50,803 | INFO     | pilot state: finished 
[2025-10-12 05:30:22] 2025-10-12 11:29:50,803 | INFO     | transexitcode: 0
[2025-10-12 05:30:22] 2025-10-12 11:29:50,803 | INFO     | exeerrorcode: 0
[2025-10-12 05:30:22] 2025-10-12 11:29:50,803 | INFO     | exeerrordiag: 
[2025-10-12 05:30:22] 2025-10-12 11:29:50,803 | INFO     | exitcode: 0
[2025-10-12 05:30:22] 2025-10-12 11:29:50,803 | INFO     | exitmsg: OK
[2025-10-12 05:30:22] 2025-10-12 11:29:50,803 | INFO     | cpuconsumptiontime: 26039 s
[2025-10-12 05:30:22] 2025-10-12 11:29:50,803 | INFO     | nevents: 400
[2025-10-12 05:30:22] 2025-10-12 11:29:50,804 | INFO     | neventsw: 0
[2025-10-12 05:30:22] 2025-10-12 11:29:50,804 | INFO     | pid: 37416
[2025-10-12 05:30:22] 2025-10-12 11:29:50,804 | INFO     | pgrp: 37416
[2025-10-12 05:30:22] 2025-10-12 11:29:50,804 | INFO     | corecount: 4
[2025-10-12 05:30:22] 2025-10-12 11:29:50,804 | INFO     | event service: False
[2025-10-12 05:30:22] 2025-10-12 11:29:50,804 | INFO     | sizes: {0: 2348852, 3: 2349114, 11: 2349142, 6769: 2376428, 6770: 2385483, 6773: 2385621}
[2025-10-12 05:30:22] 2025-10-12 11:29:50,804 | INFO     | --------------------------------------------------
[2025-10-12 05:30:22] 2025-10-12 11:29:50,804 | INFO     | 
[2025-10-12 05:30:22] 2025-10-12 11:29:50,804 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/3
[2025-10-12 05:30:22] 2025-10-12 11:29:50,836 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,836 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,836 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,836 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,837 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,837 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,837 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,837 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,837 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,837 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:30:22] 2025-10-12 11:29:50,837 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,837 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:30:22] 2025-10-12 11:29:50,837 | INFO     | job 6839083897 has completed (purged errors)
[2025-10-12 05:30:22] 2025-10-12 11:29:50,838 | INFO     | overall cleanup function is called
[2025-10-12 05:30:22] 2025-10-12 11:29:51,844 | INFO     | --- collectZombieJob: --- 10, [37416]
[2025-10-12 05:30:22] 2025-10-12 11:29:51,844 | INFO     | zombie collector waiting for pid 37416
[2025-10-12 05:30:22] 2025-10-12 11:29:51,844 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:30:22] 2025-10-12 11:29:51,844 | INFO     | collected zombie processes
[2025-10-12 05:30:22] 2025-10-12 11:29:51,844 | INFO     | will attempt to kill all subprocesses of pid=37416
[2025-10-12 05:30:22] 2025-10-12 11:29:51,990 | INFO     | process IDs to be killed: [37416] (in reverse order)
[2025-10-12 05:30:22] 2025-10-12 11:29:52,062 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:30:22] 2025-10-12 11:29:52,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:30:22] 2025-10-12 11:29:52,067 | INFO     | did not find any defunct processes belonging to 37416
[2025-10-12 05:30:22] 2025-10-12 11:29:52,071 | INFO     | did not find any defunct processes belonging to 37416
[2025-10-12 05:30:22] 2025-10-12 11:29:52,071 | INFO     | ready for new job
[2025-10-12 05:30:22] 2025-10-12 11:29:52,071 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:30:22] 2025-10-12 11:29:52,073 | INFO     | ***************************************
[2025-10-12 05:30:22] 2025-10-12 11:29:52,073 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:30:22] 2025-10-12 11:29:52,073 | INFO     | ***************************************
[2025-10-12 05:30:22] 2025-10-12 11:29:52,073 | INFO     | 
[2025-10-12 05:30:22] 2025-10-12 11:29:52,074 | INFO     | architecture information:
[2025-10-12 05:30:22] 2025-10-12 11:29:52,075 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:30:22] 2025-10-12 11:29:52,090 | INFO     | cat /etc/os-release:
[2025-10-12 05:30:22] NAME="CentOS Linux"
[2025-10-12 05:30:22] VERSION="7 (Core)"
[2025-10-12 05:30:22] ID="centos"
[2025-10-12 05:30:22] ID_LIKE="rhel fedora"
[2025-10-12 05:30:22] VERSION_ID="7"
[2025-10-12 05:30:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:30:22] ANSI_COLOR="0;31"
[2025-10-12 05:30:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:30:22] HOME_URL="https://www.centos.org/"
[2025-10-12 05:30:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:30:22] 
[2025-10-12 05:30:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:30:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:30:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:30:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:30:22] 
[2025-10-12 05:30:22] 2025-10-12 11:29:52,090 | INFO     | ***************************************
[2025-10-12 05:30:22] 2025-10-12 11:29:52,593 | INFO     | executing command: df -mP /var/lib/boinc3/slots/3
[2025-10-12 05:30:22] 2025-10-12 11:29:52,608 | INFO     | sufficient remaining disk space (377076318208 B)
[2025-10-12 05:30:22] 2025-10-12 11:29:52,608 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:30:22] 2025-10-12 11:29:52,608 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:30:22] 2025-10-12 11:29:52,608 | INFO     | update_server=False
[2025-10-12 05:30:22] 2025-10-12 11:29:52,608 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:30:22] 2025-10-12 11:29:52,609 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:30:22] 2025-10-12 11:29:52,609 | INFO     | aborting loop
[2025-10-12 05:30:22] 2025-10-12 11:29:52,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:30:22] 2025-10-12 11:29:52,689 | INFO     | all data control threads have been joined
[2025-10-12 05:30:22] 2025-10-12 11:29:53,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:30:22] 2025-10-12 11:29:53,614 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:30:22] 2025-10-12 11:29:53,614 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:30:22] 2025-10-12 11:29:53,615 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:30:22] 2025-10-12 11:29:53,695 | INFO     | [data] control thread has finished
[2025-10-12 05:30:22] 2025-10-12 11:29:53,777 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:30:22] 2025-10-12 11:29:53,806 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:30:22] 2025-10-12 11:29:53,843 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:30:22] 2025-10-12 11:29:53,846 | INFO     | all payload control threads have been joined
[2025-10-12 05:30:22] 2025-10-12 11:29:54,094 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:30:22] 2025-10-12 11:29:54,122 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:30:22] 2025-10-12 11:29:54,150 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:30:22] 2025-10-12 11:29:54,193 | INFO     | [job] validate thread has finished
[2025-10-12 05:30:22] 2025-10-12 11:29:54,238 | INFO     | all job control threads have been joined
[2025-10-12 05:30:22] 2025-10-12 11:29:54,270 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:30:22] 2025-10-12 11:29:54,431 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:30:22] 2025-10-12 11:29:54,631 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:30:22] 2025-10-12 11:29:54,851 | INFO     | [payload] control thread has finished
[2025-10-12 05:30:22] 2025-10-12 11:29:55,131 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:30:22] 2025-10-12 11:29:55,244 | INFO     | [job] control thread has finished
[2025-10-12 05:30:22] 2025-10-12 11:29:57,813 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:30:22] 2025-10-12 11:29:58,834 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123299601983296)>', '<ExcThread(monitor, started 123298847389440)>']
[2025-10-12 05:30:22] 2025-10-12 11:30:03,859 | INFO     | all workflow threads have been joined
[2025-10-12 05:30:22] 2025-10-12 11:30:03,859 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:30:22] 2025-10-12 11:30:03,860 | INFO     | traces error code: 0
[2025-10-12 05:30:22] 2025-10-12 11:30:03,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:30:22] 2025-10-12 11:30:22,217 | INFO     | PID=30766 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 05:30:22] 2025-10-12 11:30:22,217 | INFO     | .. there are 7 such processes running
[2025-10-12 05:30:22] 2025-10-12 11:30:22,218 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:30:22] 2025-10-12 11:30:22,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:30:22] 2025-10-12 11:30:22,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:30:22] 2025-10-12 11:30:22,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:30:22] 2025-10-12 11:30:22,218 | INFO     | [monitor] control thread has ended
[2025-10-12 05:30:22] 2025-10-12 11:30:22,334 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:30:22] 2025-10-12 11:30:22,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:30:22] 2025-10-12 11:30:22,339 [wrapper] pilotpid: 30766
[2025-10-12 05:30:22] 2025-10-12 11:30:22,341 [wrapper] Pilot exit status: 0
[2025-10-12 05:30:22] 2025-10-12 11:30:22,348 [wrapper] pandaids: 6839083897
[2025-10-12 05:30:22] 2025-10-12 11:30:22,382 [wrapper] cleanup supervisor_pilot  206384 30767
[2025-10-12 05:30:22] 2025-10-12 11:30:22,384 [wrapper] Test setup, not cleaning
[2025-10-12 05:30:22] 2025-10-12 11:30:22,386 [wrapper] apfmon messages muted
[2025-10-12 05:30:22] 2025-10-12 11:30:22,388 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:30:22] 2025-10-12 11:30:22,390 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:30:22]  *** Error codes and diagnostics ***
[2025-10-12 05:30:22]     "exeErrorCode": 0,
[2025-10-12 05:30:22]     "exeErrorDiag": "",
[2025-10-12 05:30:22]     "pilotErrorCode": 0,
[2025-10-12 05:30:22]     "pilotErrorDiag": "",
[2025-10-12 05:30:22]  *** Listing of results directory ***
[2025-10-12 05:30:22] total 410888
[2025-10-12 05:30:22] -rw-r--r-- 1 boinc boinc    557409 Oct 11 16:51 pilot3.tar.gz
[2025-10-12 05:30:22] -rwx------ 1 boinc boinc     36292 Oct 11 17:05 runpilot2-wrapper.sh
[2025-10-12 05:30:22] -rw-r--r-- 1 boinc boinc      5112 Oct 11 17:05 queuedata.json
[2025-10-12 05:30:22] -rw-rw-r-- 1 boinc boinc       100 Oct 12 03:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:30:22] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 03:36 run_atlas
[2025-10-12 05:30:22] -rw-rw-r-- 1 boinc boinc       105 Oct 12 03:36 job.xml
[2025-10-12 05:30:22] -rw-rw-r-- 1 boinc boinc      9753 Oct 12 03:36 init_data.xml
[2025-10-12 05:30:22] -rw-r--r-- 2 boinc boinc 221276017 Oct 12 03:36 EVNT.46676267._002688.pool.root.1
[2025-10-12 05:30:22] -rw-r--r-- 2 boinc boinc     15120 Oct 12 03:36 start_atlas.sh
[2025-10-12 05:30:22] drwxrwx--x 2 boinc boinc      4096 Oct 12 03:36 shared
[2025-10-12 05:30:22] -rw-r--r-- 2 boinc boinc    569681 Oct 12 03:36 input.tar.gz
[2025-10-12 05:30:22] -rw-rw-r-- 1 boinc boinc         0 Oct 12 03:36 boinc_lockfile
[2025-10-12 05:30:22] -rw-rw-r-- 1 boinc boinc      2547 Oct 12 03:36 pandaJob.out
[2025-10-12 05:30:22] -rw------- 1 boinc boinc    975536 Oct 12 03:36 agis_schedconf.cvmfs.json
[2025-10-12 05:30:22] -rw------- 1 boinc boinc   1560580 Oct 12 03:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:30:22] drwx------ 5 boinc boinc      4096 Oct 12 03:36 pilot3
[2025-10-12 05:30:22] -rw------- 1 boinc boinc 193021008 Oct 12 05:29 HITS.46676269._066661.pool.root.1
[2025-10-12 05:30:22] -rw-rw-r-- 1 boinc boinc       529 Oct 12 05:29 boinc_task_state.xml
[2025-10-12 05:30:22] -rw------- 1 boinc boinc      1024 Oct 12 05:29 memory_monitor_summary.json
[2025-10-12 05:30:22] -rw------- 1 boinc boinc    283806 Oct 12 05:29 log.46676269._066661.job.log.tgz.1
[2025-10-12 05:30:22] -rw------- 1 boinc boinc      7776 Oct 12 05:29 heartbeat.json
[2025-10-12 05:30:22] -rw-rw-r-- 1 boinc boinc      8192 Oct 12 05:30 boinc_mmap_file
[2025-10-12 05:30:22] -rw-rw-r-- 1 boinc boinc        27 Oct 12 05:30 wrapper_checkpoint.txt
[2025-10-12 05:30:22] -rw------- 1 boinc boinc        95 Oct 12 05:30 pilot_heartbeat.json
[2025-10-12 05:30:22] -rw------- 1 boinc boinc       820 Oct 12 05:30 pilotlog.txt
[2025-10-12 05:30:22] -rw------- 1 boinc boinc    987415 Oct 12 05:30 log.46676269._066661.job.log.1
[2025-10-12 05:30:22] -rw------- 1 boinc boinc       357 Oct 12 05:30 output.list
[2025-10-12 05:30:22] -rw-rw-r-- 1 boinc boinc       620 Oct 12 05:30 runtime_log
[2025-10-12 05:30:22] -rw------- 1 boinc boinc   1290240 Oct 12 05:30 result.tar.gz
[2025-10-12 05:30:22] -rw-rw-r-- 1 boinc boinc      8755 Oct 12 05:30 runtime_log.err
[2025-10-12 05:30:22] -rw------- 1 boinc boinc       658 Oct 12 05:30 HR1LDmNpxR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmElSMDmIDzgqm.diag
[2025-10-12 05:30:22] -rw-rw-r-- 1 boinc boinc     21186 Oct 12 05:30 stderr.txt
[2025-10-12 05:30:22] HITS file was successfully produced:
[2025-10-12 05:30:22] -rw------- 1 boinc boinc 193021008 Oct 12 05:29 shared/HITS.pool.root.1
[2025-10-12 05:30:22]  *** Contents of shared directory: ***
[2025-10-12 05:30:22] total 406436
[2025-10-12 05:30:22] -rw-r--r-- 2 boinc boinc 221276017 Oct 12 03:36 ATLAS.root_0
[2025-10-12 05:30:22] -rw-r--r-- 2 boinc boinc     15120 Oct 12 03:36 start_atlas.sh
[2025-10-12 05:30:22] -rw-r--r-- 2 boinc boinc    569681 Oct 12 03:36 input.tar.gz
[2025-10-12 05:30:22] -rw------- 1 boinc boinc 193021008 Oct 12 05:29 HITS.pool.root.1
[2025-10-12 05:30:22] -rw------- 1 boinc boinc   1290240 Oct 12 05:30 result.tar.gz
05:30:23 (26026): run_atlas exited; CPU time 26104.308855
05:30:23 (26026): called boinc_finish(0)

</stderr_txt>
]]>

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