Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:27:53 (945185): wrapper (7.7.26015): starting
07:27:53 (945185): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 07:27:53] Arguments: --nthreads 8
[2025-10-12 07:27:53] Threads: 8
[2025-10-12 07:27:53] Checking for CVMFS
[2025-10-12 07:27:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 07:27:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 07:27:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 07:27:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 07:27:53] 2.13.1.0 5299 5617 113288 151619 2 65 40800292 40960001 10428 16776704 0 9652025 99.833 2382996 36379 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 07:27:53] CVMFS is ok
[2025-10-12 07:27:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 07:27:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 07:27:53] Further information can be found at the LHC@home message board.
[2025-10-12 07:27:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 07:27:53] Checking for apptainer binary...
[2025-10-12 07:27:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 07:27:53] Running /usr/bin/apptainer --version
[2025-10-12 07:27:54] apptainer version 1.4.3-1.el9
[2025-10-12 07:27:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 07:27:54] c-210-33-2.aglt2.org
[2025-10-12 07:27:54] apptainer works
[2025-10-12 07:27:54] Set ATHENA_PROC_NUMBER=8
[2025-10-12 07:27:54] Set ATHENA_CORE_NUMBER=8
[2025-10-12 07:27:54] Starting ATLAS job with PandaID=6839386242
[2025-10-12 07:27:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:39:36]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:39:37] 2025-10-12 13:38:33,860 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:39:37] 2025-10-12 13:38:33,895 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 09:39:37] 2025-10-12 13:38:33,899 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2768.529875
[2025-10-12 09:39:37] 2025-10-12 13:38:33,910 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6839386242/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:39:37] 2025-10-12 13:38:33,911 | INFO     | extracted standard info from prmon json
[2025-10-12 09:39:37] 2025-10-12 13:38:33,911 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:39:37] 2025-10-12 13:38:33,911 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:39:37] 2025-10-12 13:38:33,912 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:39:37] 2025-10-12 13:38:33,912 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:39:37] 2025-10-12 13:38:33,914 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:39:37] 2025-10-12 13:38:33,915 | INFO     | sum of square deviations: 635118094.9291354
[2025-10-12 09:39:37] 2025-10-12 13:38:33,915 | INFO     | sum of deviations: -17401464257.992126
[2025-10-12 09:39:37] 2025-10-12 13:38:33,915 | INFO     | mean x: 1760272397.023622
[2025-10-12 09:39:37] 2025-10-12 13:38:33,916 | INFO     | mean y: 2615621.3307086616
[2025-10-12 09:39:37] 2025-10-12 13:38:33,916 | INFO     | -- intersect: 48231940916.423164
[2025-10-12 09:39:37] 2025-10-12 13:38:33,916 | INFO     | intersect: 48231940916.423164
[2025-10-12 09:39:37] 2025-10-12 13:38:33,916 | INFO     | chi2: 1.751553737828013
[2025-10-12 09:39:37] 2025-10-12 13:38:33,916 | INFO     | sum of square deviations: 563015332.4262303
[2025-10-12 09:39:37] 2025-10-12 13:38:33,917 | INFO     | sum of deviations: -15968754885.688528
[2025-10-12 09:39:37] 2025-10-12 13:38:33,917 | INFO     | mean x: 1760272244.5245903
[2025-10-12 09:39:37] 2025-10-12 13:38:33,917 | INFO     | mean y: 2618653.229508197
[2025-10-12 09:39:37] 2025-10-12 13:38:33,917 | INFO     | -- intersect: 49929067163.540764
[2025-10-12 09:39:37] 2025-10-12 13:38:33,917 | INFO     | intersect: 49929067163.540764
[2025-10-12 09:39:37] 2025-10-12 13:38:33,917 | INFO     | chi2: 1.748086342613213
[2025-10-12 09:39:37] 2025-10-12 13:38:33,917 | INFO     | current chi2=1.748086342613213 (change=0.19796110960887764 %)
[2025-10-12 09:39:37] 2025-10-12 13:38:33,917 | INFO     | right removable region: 121
[2025-10-12 09:39:37] 2025-10-12 13:38:33,918 | INFO     | sum of square deviations: 563013502.4262303
[2025-10-12 09:39:37] 2025-10-12 13:38:33,918 | INFO     | sum of deviations: -36665107710.42623
[2025-10-12 09:39:37] 2025-10-12 13:38:33,918 | INFO     | mean x: 1760272549.5245903
[2025-10-12 09:39:37] 2025-10-12 13:38:33,918 | INFO     | mean y: 2655589.475409836
[2025-10-12 09:39:37] 2025-10-12 13:38:33,918 | INFO     | -- intersect: 114636820400.61548
[2025-10-12 09:39:37] 2025-10-12 13:38:33,919 | INFO     | intersect: 114636820400.61548
[2025-10-12 09:39:37] 2025-10-12 13:38:33,919 | INFO     | chi2: 0.22318804056581698
[2025-10-12 09:39:37] 2025-10-12 13:38:33,919 | INFO     | current chi2=0.22318804056581698 (change=87.2577109256963 %)
[2025-10-12 09:39:37] 2025-10-12 13:38:33,919 | INFO     | sum of square deviations: 496583434.9230769
[2025-10-12 09:39:37] 2025-10-12 13:38:33,920 | INFO     | sum of deviations: -34116061328.28204
[2025-10-12 09:39:37] 2025-10-12 13:38:33,920 | INFO     | mean x: 1760272702.025641
[2025-10-12 09:39:37] 2025-10-12 13:38:33,920 | INFO     | mean y: 2649639.7606837605
[2025-10-12 09:39:37] 2025-10-12 13:38:33,920 | INFO     | -- intersect: 120936146879.97789
[2025-10-12 09:39:37] 2025-10-12 13:38:33,920 | INFO     | intersect: 120936146879.97789
[2025-10-12 09:39:37] 2025-10-12 13:38:33,920 | INFO     | chi2: 0.20917552572400816
[2025-10-12 09:39:37] 2025-10-12 13:38:33,920 | INFO     | current chi2=0.20917552572400816 (change=6.278344846025298 %)
[2025-10-12 09:39:37] 2025-10-12 13:38:33,920 | INFO     | left removable region: 20
[2025-10-12 09:39:37] 2025-10-12 13:38:33,921 | INFO     | sum of square deviations: 319439555.96039516
[2025-10-12 09:39:37] 2025-10-12 13:38:33,921 | INFO     | sum of deviations: -23243524831.63369
[2025-10-12 09:39:37] 2025-10-12 13:38:33,921 | INFO     | mean x: 1760272824.019802
[2025-10-12 09:39:37] 2025-10-12 13:38:33,921 | INFO     | mean y: 2630440.3168316833
[2025-10-12 09:39:37] 2025-10-12 13:38:33,921 | INFO     | -- intersect: 128086157768.49457
[2025-10-12 09:39:37] 2025-10-12 13:38:33,921 | INFO     | intersect: 128086157768.49457
[2025-10-12 09:39:37] 2025-10-12 13:38:33,922 | INFO     | chi2: 0.19125821901832973
[2025-10-12 09:39:37] 2025-10-12 13:38:33,922 | INFO     | -- intersect: 128086157768.49457
[2025-10-12 09:39:37] 2025-10-12 13:38:33,922 | INFO     | current memory leak: -72.76 B/s (using 101 data points, chi2=0.19)
[2025-10-12 09:39:37] 2025-10-12 13:38:33,922 | INFO     | could have reported an average CPU frequency of 2660 MHz (8 samples)
[2025-10-12 09:39:37] 2025-10-12 13:38:33,922 | INFO     | ..............................
[2025-10-12 09:39:37] 2025-10-12 13:38:33,923 | INFO     | . Timing measurements:
[2025-10-12 09:39:37] 2025-10-12 13:38:33,923 | INFO     | . get job = 0 s
[2025-10-12 09:39:37] 2025-10-12 13:38:33,923 | INFO     | . initial setup = 3 s
[2025-10-12 09:39:37] 2025-10-12 13:38:33,923 | INFO     | . payload setup = 16 s
[2025-10-12 09:39:37] 2025-10-12 13:38:33,923 | INFO     | . stage-in = 0 s
[2025-10-12 09:39:37] 2025-10-12 13:38:33,923 | INFO     | . payload execution = 7759 s
[2025-10-12 09:39:37] 2025-10-12 13:38:33,923 | INFO     | . stage-out = 1 s
[2025-10-12 09:39:37] 2025-10-12 13:38:33,923 | INFO     | . log creation = 0 s
[2025-10-12 09:39:37] 2025-10-12 13:38:33,923 | INFO     | ..............................
[2025-10-12 09:39:37] 2025-10-12 13:38:34,047 | INFO     | 
[2025-10-12 09:39:37] 2025-10-12 13:38:34,047 | INFO     | job summary report
[2025-10-12 09:39:37] 2025-10-12 13:38:34,048 | INFO     | --------------------------------------------------
[2025-10-12 09:39:37] 2025-10-12 13:38:34,048 | INFO     | PanDA job id: 6839386242
[2025-10-12 09:39:37] 2025-10-12 13:38:34,048 | INFO     | task id: 46676269
[2025-10-12 09:39:37] 2025-10-12 13:38:34,048 | INFO     | errors: (none)
[2025-10-12 09:39:37] 2025-10-12 13:38:34,048 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:39:37] 2025-10-12 13:38:34,048 | INFO     | pilot state: finished 
[2025-10-12 09:39:37] 2025-10-12 13:38:34,048 | INFO     | transexitcode: 0
[2025-10-12 09:39:37] 2025-10-12 13:38:34,048 | INFO     | exeerrorcode: 0
[2025-10-12 09:39:37] 2025-10-12 13:38:34,048 | INFO     | exeerrordiag: 
[2025-10-12 09:39:37] 2025-10-12 13:38:34,048 | INFO     | exitcode: 0
[2025-10-12 09:39:37] 2025-10-12 13:38:34,048 | INFO     | exitmsg: OK
[2025-10-12 09:39:37] 2025-10-12 13:38:34,048 | INFO     | cpuconsumptiontime: 43280 s
[2025-10-12 09:39:37] 2025-10-12 13:38:34,048 | INFO     | nevents: 400
[2025-10-12 09:39:37] 2025-10-12 13:38:34,048 | INFO     | neventsw: 0
[2025-10-12 09:39:37] 2025-10-12 13:38:34,048 | INFO     | pid: 955361
[2025-10-12 09:39:37] 2025-10-12 13:38:34,049 | INFO     | pgrp: 955361
[2025-10-12 09:39:37] 2025-10-12 13:38:34,049 | INFO     | corecount: 8
[2025-10-12 09:39:37] 2025-10-12 13:38:34,049 | INFO     | event service: False
[2025-10-12 09:39:37] 2025-10-12 13:38:34,049 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2349175, 7779: 2376854, 7781: 2385908, 7791: 2386046}
[2025-10-12 09:39:37] 2025-10-12 13:38:34,049 | INFO     | --------------------------------------------------
[2025-10-12 09:39:37] 2025-10-12 13:38:34,049 | INFO     | 
[2025-10-12 09:39:37] 2025-10-12 13:38:34,049 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 09:39:37] 2025-10-12 13:38:34,070 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,071 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,071 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,071 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,071 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,071 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,071 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,072 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,072 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,072 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,072 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,072 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,072 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,072 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:39:37] 2025-10-12 13:38:34,072 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,072 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:39:37] 2025-10-12 13:38:34,072 | INFO     | job 6839386242 has completed (purged errors)
[2025-10-12 09:39:37] 2025-10-12 13:38:34,072 | INFO     | overall cleanup function is called
[2025-10-12 09:39:37] 2025-10-12 13:38:35,081 | INFO     | --- collectZombieJob: --- 10, [955361]
[2025-10-12 09:39:37] 2025-10-12 13:38:35,081 | INFO     | zombie collector waiting for pid 955361
[2025-10-12 09:39:37] 2025-10-12 13:38:35,081 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:39:37] 2025-10-12 13:38:35,081 | INFO     | collected zombie processes
[2025-10-12 09:39:37] 2025-10-12 13:38:35,081 | INFO     | will attempt to kill all subprocesses of pid=955361
[2025-10-12 09:39:37] 2025-10-12 13:38:35,378 | INFO     | process IDs to be killed: [955361] (in reverse order)
[2025-10-12 09:39:37] 2025-10-12 13:38:35,461 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:39:37] 2025-10-12 13:38:35,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:39:37] 2025-10-12 13:38:35,471 | INFO     | did not find any defunct processes belonging to 955361
[2025-10-12 09:39:37] 2025-10-12 13:38:35,480 | INFO     | did not find any defunct processes belonging to 955361
[2025-10-12 09:39:37] 2025-10-12 13:38:35,481 | INFO     | ready for new job
[2025-10-12 09:39:37] 2025-10-12 13:38:35,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:39:37] 2025-10-12 13:38:35,483 | INFO     | ***************************************
[2025-10-12 09:39:37] 2025-10-12 13:38:35,483 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:39:37] 2025-10-12 13:38:35,483 | INFO     | ***************************************
[2025-10-12 09:39:37] 2025-10-12 13:38:35,483 | INFO     | 
[2025-10-12 09:39:37] 2025-10-12 13:38:35,486 | INFO     | architecture information:
[2025-10-12 09:39:37] 2025-10-12 13:38:35,487 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:39:37] 2025-10-12 13:38:35,504 | INFO     | cat /etc/os-release:
[2025-10-12 09:39:37] NAME="CentOS Linux"
[2025-10-12 09:39:37] VERSION="7 (Core)"
[2025-10-12 09:39:37] ID="centos"
[2025-10-12 09:39:37] ID_LIKE="rhel fedora"
[2025-10-12 09:39:37] VERSION_ID="7"
[2025-10-12 09:39:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:39:37] ANSI_COLOR="0;31"
[2025-10-12 09:39:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:39:37] HOME_URL="https://www.centos.org/"
[2025-10-12 09:39:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:39:37] 
[2025-10-12 09:39:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:39:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:39:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:39:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:39:37] 
[2025-10-12 09:39:37] 2025-10-12 13:38:35,505 | INFO     | ***************************************
[2025-10-12 09:39:37] 2025-10-12 13:38:36,008 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 09:39:37] 2025-10-12 13:38:36,030 | INFO     | sufficient remaining disk space (74072457216 B)
[2025-10-12 09:39:37] 2025-10-12 13:38:36,030 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:39:37] 2025-10-12 13:38:36,030 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:39:37] 2025-10-12 13:38:36,031 | INFO     | update_server=False
[2025-10-12 09:39:37] 2025-10-12 13:38:36,031 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:39:37] 2025-10-12 13:38:36,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:39:37] 2025-10-12 13:38:36,168 | INFO     | all job control threads have been joined
[2025-10-12 09:39:37] 2025-10-12 13:38:36,364 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 09:39:37] 2025-10-12 13:38:36,364 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 09:39:37] 2025-10-12 13:38:36,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:39:37] 2025-10-12 13:38:36,365 | INFO     | will abort loop
[2025-10-12 09:39:37] 2025-10-12 13:38:36,480 | INFO     | all data control threads have been joined
[2025-10-12 09:39:37] 2025-10-12 13:38:36,920 | INFO     | all payload control threads have been joined
[2025-10-12 09:39:37] 2025-10-12 13:38:37,037 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:39:37] 2025-10-12 13:38:37,038 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:39:37] 2025-10-12 13:38:37,144 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:39:37] 2025-10-12 13:38:37,173 | INFO     | [job] control thread has finished
[2025-10-12 09:39:37] 2025-10-12 13:38:37,372 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:39:37] 2025-10-12 13:38:37,486 | INFO     | [data] control thread has finished
[2025-10-12 09:39:37] 2025-10-12 13:38:37,539 | INFO     | [job] validate thread has finished
[2025-10-12 09:39:37] 2025-10-12 13:38:37,563 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:39:37] 2025-10-12 13:38:37,603 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:39:37] 2025-10-12 13:38:37,677 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:39:37] 2025-10-12 13:38:37,866 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:39:37] 2025-10-12 13:38:37,925 | INFO     | [payload] control thread has finished
[2025-10-12 09:39:37] 2025-10-12 13:38:38,002 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:39:37] 2025-10-12 13:38:38,286 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:39:37] 2025-10-12 13:38:38,469 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:39:37] 2025-10-12 13:38:39,149 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:39:37] 2025-10-12 13:38:39,437 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:39:37] 2025-10-12 13:38:43,443 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:39:37] 2025-10-12 13:39:05,587 | INFO     | PID=948868 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 09:39:37] 2025-10-12 13:39:05,587 | INFO     | .. there are 10 such processes running
[2025-10-12 09:39:37] 2025-10-12 13:39:05,587 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:39:37] 2025-10-12 13:39:05,587 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:39:37] 2025-10-12 13:39:05,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:39:37] 2025-10-12 13:39:31,081 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:39:37] 2025-10-12 13:39:31,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140120154363712)>', '<ExcThread(monitor, started 140119650580224)>']
[2025-10-12 09:39:37] 2025-10-12 13:39:31,716 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:39:37] 2025-10-12 13:39:31,717 | INFO     | [monitor] control thread has ended
[2025-10-12 09:39:37] 2025-10-12 13:39:36,679 | INFO     | all workflow threads have been joined
[2025-10-12 09:39:37] 2025-10-12 13:39:36,679 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:39:37] 2025-10-12 13:39:36,679 | INFO     | traces error code: 0
[2025-10-12 09:39:37] 2025-10-12 13:39:36,680 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:39:37] 2025-10-12 13:39:36,831 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:39:37] 2025-10-12 13:39:36,833 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:39:37] 2025-10-12 13:39:36,835 [wrapper] pilotpid: 948868
[2025-10-12 09:39:37] 2025-10-12 13:39:36,837 [wrapper] Pilot exit status: 0
[2025-10-12 09:39:37] 2025-10-12 13:39:36,848 [wrapper] pandaids: 6839386242
[2025-10-12 09:39:37] 2025-10-12 13:39:36,908 [wrapper] cleanup supervisor_pilot 1098343 948869
[2025-10-12 09:39:37] 2025-10-12 13:39:36,911 [wrapper] Test setup, not cleaning
[2025-10-12 09:39:37] 2025-10-12 13:39:36,915 [wrapper] apfmon messages muted
[2025-10-12 09:39:37] 2025-10-12 13:39:36,919 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:39:37] 2025-10-12 13:39:36,923 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:39:37]  *** Error codes and diagnostics ***
[2025-10-12 09:39:37]     "exeErrorCode": 0,
[2025-10-12 09:39:37]     "exeErrorDiag": "",
[2025-10-12 09:39:37]     "pilotErrorCode": 0,
[2025-10-12 09:39:37]     "pilotErrorDiag": "",
[2025-10-12 09:39:37]  *** Listing of results directory ***
[2025-10-12 09:39:37] total 405908
[2025-10-12 09:39:37] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:04 pilot3.tar.gz
[2025-10-12 09:39:37] -rwx------. 1 boincer umatlas     36292 Oct 12 00:05 runpilot2-wrapper.sh
[2025-10-12 09:39:37] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 00:06 queuedata.json
[2025-10-12 09:39:37] -rw-r--r--. 1 boincer umatlas       100 Oct 12 07:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:39:37] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 07:27 run_atlas
[2025-10-12 09:39:37] -rw-r--r--. 1 boincer umatlas       105 Oct 12 07:27 job.xml
[2025-10-12 09:39:37] -rw-r--r--. 2 boincer umatlas 219008527 Oct 12 07:27 EVNT.46676267._003243.pool.root.1
[2025-10-12 09:39:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 07:27 start_atlas.sh
[2025-10-12 09:39:37] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 07:27 shared
[2025-10-12 09:39:37] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 07:27 input.tar.gz
[2025-10-12 09:39:37] -rw-r--r--. 1 boincer umatlas         0 Oct 12 07:27 boinc_lockfile
[2025-10-12 09:39:37] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 07:27 pandaJob.out
[2025-10-12 09:39:37] -rw-------. 1 boincer umatlas    975520 Oct 12 07:28 agis_schedconf.cvmfs.json
[2025-10-12 09:39:37] -rw-------. 1 boincer umatlas   1560580 Oct 12 07:28 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:39:37] drwx------. 5 boincer umatlas      4096 Oct 12 07:28 pilot3
[2025-10-12 09:39:37] -rw-r--r--. 1 boincer umatlas      6838 Oct 12 09:31 init_data.xml
[2025-10-12 09:39:37] -rw-------. 1 boincer umatlas 189808764 Oct 12 09:37 HITS.46676269._070594.pool.root.1
[2025-10-12 09:39:37] -rw-r--r--. 1 boincer umatlas       529 Oct 12 09:37 boinc_task_state.xml
[2025-10-12 09:39:37] -rw-------. 1 boincer umatlas      1035 Oct 12 09:38 memory_monitor_summary.json
[2025-10-12 09:39:37] -rw-------. 1 boincer umatlas    379959 Oct 12 09:38 log.46676269._070594.job.log.tgz.1
[2025-10-12 09:39:37] -rw-------. 1 boincer umatlas        95 Oct 12 09:38 pilot_heartbeat.json
[2025-10-12 09:39:37] -rw-------. 1 boincer umatlas      7823 Oct 12 09:38 heartbeat.json
[2025-10-12 09:39:37] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 09:39 boinc_mmap_file
[2025-10-12 09:39:37] -rw-r--r--. 1 boincer umatlas        27 Oct 12 09:39 wrapper_checkpoint.txt
[2025-10-12 09:39:37] -rw-------. 1 boincer umatlas      5009 Oct 12 09:39 pilotlog.txt
[2025-10-12 09:39:37] -rw-------. 1 boincer umatlas   1082179 Oct 12 09:39 log.46676269._070594.job.log.1
[2025-10-12 09:39:37] -rw-------. 1 boincer umatlas       357 Oct 12 09:39 output.list
[2025-10-12 09:39:37] -rw-r--r--. 1 boincer umatlas       620 Oct 12 09:39 runtime_log
[2025-10-12 09:39:37] -rw-------. 1 boincer umatlas   1484800 Oct 12 09:39 result.tar.gz
[2025-10-12 09:39:37] -rw-------. 1 boincer umatlas       654 Oct 12 09:39 rWEMDmQW2R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2WiNDm1qQmMo.diag
[2025-10-12 09:39:37] -rw-r--r--. 1 boincer umatlas      8713 Oct 12 09:39 runtime_log.err
[2025-10-12 09:39:37] -rw-r--r--. 1 boincer umatlas     21150 Oct 12 09:39 stderr.txt
[2025-10-12 09:39:37] HITS file was successfully produced:
[2025-10-12 09:39:37] -rw-------. 1 boincer umatlas 189808764 Oct 12 09:37 shared/HITS.pool.root.1
[2025-10-12 09:39:37]  *** Contents of shared directory: ***
[2025-10-12 09:39:37] total 401272
[2025-10-12 09:39:37] -rw-r--r--. 2 boincer umatlas 219008527 Oct 12 07:27 ATLAS.root_0
[2025-10-12 09:39:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 07:27 start_atlas.sh
[2025-10-12 09:39:37] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 07:27 input.tar.gz
[2025-10-12 09:39:37] -rw-------. 1 boincer umatlas 189808764 Oct 12 09:37 HITS.pool.root.1
[2025-10-12 09:39:37] -rw-------. 1 boincer umatlas   1484800 Oct 12 09:39 result.tar.gz
09:39:38 (945185): run_atlas exited; CPU time 43418.998946
09:39:38 (945185): called boinc_finish(0)

</stderr_txt>
]]>

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