Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:52:54 (3436267): wrapper (7.7.26015): starting
05:52:54 (3436267): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 05:52:54] Arguments: --nthreads 9
[2025-10-12 05:52:54] Threads: 9
[2025-10-12 05:52:54] Checking for CVMFS
[2025-10-12 05:52:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:52:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:52:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:52:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:52:56] 2.13.2.0 6179 5524 120432 151615 0 454 37491340 40960000 22043 16776704 0 14611970 99.942 1617907 31063 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 05:52:56] CVMFS is ok
[2025-10-12 05:52:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:52:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:52:56] Further information can be found at the LHC@home message board.
[2025-10-12 05:52:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:52:56] Checking for apptainer binary...
[2025-10-12 05:52:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:52:56] Running /usr/bin/apptainer --version
[2025-10-12 05:52:57] apptainer version 1.4.3-1.el9
[2025-10-12 05:52:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:52:58] c-211-33-2.aglt2.org
[2025-10-12 05:52:58] apptainer works
[2025-10-12 05:52:58] Set ATHENA_PROC_NUMBER=9
[2025-10-12 05:52:58] Set ATHENA_CORE_NUMBER=9
[2025-10-12 05:52:58] Starting ATLAS job with PandaID=6839385181
[2025-10-12 05:52:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:54:54]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:54:54] 2025-10-12 13:54:04,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 09:54:54] 2025-10-12 13:54:04,991 | INFO     | time since job start (14383s) is within the limit (172800.0s)
[2025-10-12 09:54:54] 2025-10-12 13:54:06,272 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 09:54:54] 2025-10-12 13:54:06,344 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2620.8018020833333
[2025-10-12 09:54:54] 2025-10-12 13:54:06,406 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839385181/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 09:54:54] 2025-10-12 13:54:06,407 | INFO     | extracted standard info from prmon json
[2025-10-12 09:54:54] 2025-10-12 13:54:06,407 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 09:54:54] 2025-10-12 13:54:06,407 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 09:54:54] 2025-10-12 13:54:06,408 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:54:54] 2025-10-12 13:54:06,408 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:54:54] 2025-10-12 13:54:06,412 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:54:54] 2025-10-12 13:54:06,413 | INFO     | sum of square deviations: 3922526868.61803
[2025-10-12 09:54:54] 2025-10-12 13:54:06,415 | INFO     | sum of deviations: 75964801130.29195
[2025-10-12 09:54:54] 2025-10-12 13:54:06,415 | INFO     | mean x: 1760270099.416309
[2025-10-12 09:54:54] 2025-10-12 13:54:06,415 | INFO     | mean y: 2488701.5021459227
[2025-10-12 09:54:54] 2025-10-12 13:54:06,415 | INFO     | -- intersect: -34087416228.803757
[2025-10-12 09:54:54] 2025-10-12 13:54:06,416 | INFO     | intersect: -34087416228.803757
[2025-10-12 09:54:54] 2025-10-12 13:54:06,416 | INFO     | chi2: 3.7474153131876307
[2025-10-12 09:54:54] 2025-10-12 13:54:06,416 | INFO     | sum of square deviations: 3675412268.5789604
[2025-10-12 09:54:54] 2025-10-12 13:54:06,418 | INFO     | sum of deviations: 89875767954.57892
[2025-10-12 09:54:54] 2025-10-12 13:54:06,418 | INFO     | mean x: 1760269946.9210527
[2025-10-12 09:54:54] 2025-10-12 13:54:06,418 | INFO     | mean y: 2497116.0877192984
[2025-10-12 09:54:54] 2025-10-12 13:54:06,419 | INFO     | -- intersect: -43041820562.06574
[2025-10-12 09:54:54] 2025-10-12 13:54:06,419 | INFO     | intersect: -43041820562.06574
[2025-10-12 09:54:54] 2025-10-12 13:54:06,419 | INFO     | chi2: 2.9735177153810315
[2025-10-12 09:54:54] 2025-10-12 13:54:06,419 | INFO     | current chi2=2.9735177153810315 (change=20.651503319718934 %)
[2025-10-12 09:54:54] 2025-10-12 13:54:06,419 | INFO     | right removable region: 227
[2025-10-12 09:54:54] 2025-10-12 13:54:06,419 | INFO     | sum of square deviations: 3675367067.732466
[2025-10-12 09:54:54] 2025-10-12 13:54:06,421 | INFO     | sum of deviations: 12885651425.934214
[2025-10-12 09:54:54] 2025-10-12 13:54:06,421 | INFO     | mean x: 1760270251.9254386
[2025-10-12 09:54:54] 2025-10-12 13:54:06,421 | INFO     | mean y: 2527514.4078947366
[2025-10-12 09:54:54] 2025-10-12 13:54:06,421 | INFO     | -- intersect: -6168891139.497198
[2025-10-12 09:54:54] 2025-10-12 13:54:06,421 | INFO     | intersect: -6168891139.497198
[2025-10-12 09:54:54] 2025-10-12 13:54:06,421 | INFO     | chi2: 0.9865788296301665
[2025-10-12 09:54:54] 2025-10-12 13:54:06,422 | INFO     | current chi2=0.9865788296301665 (change=73.67308538879396 %)
[2025-10-12 09:54:54] 2025-10-12 13:54:06,422 | INFO     | sum of square deviations: 3438839932.529137
[2025-10-12 09:54:54] 2025-10-12 13:54:06,423 | INFO     | sum of deviations: -2034865324.3632221
[2025-10-12 09:54:54] 2025-10-12 13:54:06,423 | INFO     | mean x: 1760270404.426009
[2025-10-12 09:54:54] 2025-10-12 13:54:06,424 | INFO     | mean y: 2537100.614349776
[2025-10-12 09:54:54] 2025-10-12 13:54:06,424 | INFO     | -- intersect: 1044142199.3532574
[2025-10-12 09:54:54] 2025-10-12 13:54:06,424 | INFO     | intersect: 1044142199.3532574
[2025-10-12 09:54:54] 2025-10-12 13:54:06,424 | INFO     | chi2: 0.8423337036881975
[2025-10-12 09:54:54] 2025-10-12 13:54:06,424 | INFO     | current chi2=0.8423337036881975 (change=14.620740037168792 %)
[2025-10-12 09:54:54] 2025-10-12 13:54:06,424 | INFO     | left removable region: 20
[2025-10-12 09:54:54] 2025-10-12 13:54:06,425 | INFO     | sum of square deviations: 2750492992.9951835
[2025-10-12 09:54:54] 2025-10-12 13:54:06,426 | INFO     | sum of deviations: 5714323001.347823
[2025-10-12 09:54:54] 2025-10-12 13:54:06,426 | INFO     | mean x: 1760270526.4396136
[2025-10-12 09:54:54] 2025-10-12 13:54:06,426 | INFO     | mean y: 2552056.347826087
[2025-10-12 09:54:54] 2025-10-12 13:54:06,426 | INFO     | -- intersect: -3654521196.8637447
[2025-10-12 09:54:54] 2025-10-12 13:54:06,426 | INFO     | intersect: -3654521196.8637447
[2025-10-12 09:54:54] 2025-10-12 13:54:06,427 | INFO     | chi2: 0.001374113115612933
[2025-10-12 09:54:54] 2025-10-12 13:54:06,427 | INFO     | -- intersect: -3654521196.8637447
[2025-10-12 09:54:54] 2025-10-12 13:54:06,427 | INFO     | current memory leak: 2.08 B/s (using 207 data points, chi2=0.00)
[2025-10-12 09:54:54] 2025-10-12 13:54:06,427 | INFO     | could have reported an average CPU frequency of 2566 MHz (11 samples)
[2025-10-12 09:54:54] 2025-10-12 13:54:06,428 | INFO     | ..............................
[2025-10-12 09:54:54] 2025-10-12 13:54:06,428 | INFO     | . Timing measurements:
[2025-10-12 09:54:54] 2025-10-12 13:54:06,428 | INFO     | . get job = 0 s
[2025-10-12 09:54:54] 2025-10-12 13:54:06,428 | INFO     | . initial setup = 7 s
[2025-10-12 09:54:54] 2025-10-12 13:54:06,428 | INFO     | . payload setup = 46 s
[2025-10-12 09:54:54] 2025-10-12 13:54:06,428 | INFO     | . stage-in = 0 s
[2025-10-12 09:54:54] 2025-10-12 13:54:06,428 | INFO     | . payload execution = 14204 s
[2025-10-12 09:54:54] 2025-10-12 13:54:06,428 | INFO     | . stage-out = 7 s
[2025-10-12 09:54:54] 2025-10-12 13:54:06,428 | INFO     | . log creation = 2 s
[2025-10-12 09:54:54] 2025-10-12 13:54:06,428 | INFO     | ..............................
[2025-10-12 09:54:54] 2025-10-12 13:54:06,529 | INFO     | 
[2025-10-12 09:54:54] 2025-10-12 13:54:06,529 | INFO     | job summary report
[2025-10-12 09:54:54] 2025-10-12 13:54:06,530 | INFO     | --------------------------------------------------
[2025-10-12 09:54:54] 2025-10-12 13:54:06,530 | INFO     | PanDA job id: 6839385181
[2025-10-12 09:54:54] 2025-10-12 13:54:06,530 | INFO     | task id: 46676269
[2025-10-12 09:54:54] 2025-10-12 13:54:06,530 | INFO     | errors: (none)
[2025-10-12 09:54:54] 2025-10-12 13:54:06,530 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:54:54] 2025-10-12 13:54:06,530 | INFO     | pilot state: finished 
[2025-10-12 09:54:54] 2025-10-12 13:54:06,530 | INFO     | transexitcode: 0
[2025-10-12 09:54:54] 2025-10-12 13:54:06,530 | INFO     | exeerrorcode: 0
[2025-10-12 09:54:54] 2025-10-12 13:54:06,530 | INFO     | exeerrordiag: 
[2025-10-12 09:54:54] 2025-10-12 13:54:06,530 | INFO     | exitcode: 0
[2025-10-12 09:54:54] 2025-10-12 13:54:06,530 | INFO     | exitmsg: OK
[2025-10-12 09:54:54] 2025-10-12 13:54:06,530 | INFO     | cpuconsumptiontime: 45876 s
[2025-10-12 09:54:54] 2025-10-12 13:54:06,531 | INFO     | nevents: 400
[2025-10-12 09:54:54] 2025-10-12 13:54:06,531 | INFO     | neventsw: 0
[2025-10-12 09:54:54] 2025-10-12 13:54:06,531 | INFO     | pid: 3448677
[2025-10-12 09:54:54] 2025-10-12 13:54:06,531 | INFO     | pgrp: 3448677
[2025-10-12 09:54:54] 2025-10-12 13:54:06,531 | INFO     | corecount: 9
[2025-10-12 09:54:54] 2025-10-12 13:54:06,531 | INFO     | event service: False
[2025-10-12 09:54:54] 2025-10-12 13:54:06,531 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 13: 2348913, 24: 2348969, 35: 2348997, 41: 2349415, 46: 2349443, 14255: 2379789, 14264: 2388787, 14265: 2388843, 14303:
[2025-10-12 09:54:54] 2025-10-12 13:54:06,531 | INFO     | --------------------------------------------------
[2025-10-12 09:54:54] 2025-10-12 13:54:06,531 | INFO     | 
[2025-10-12 09:54:54] 2025-10-12 13:54:06,531 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 09:54:54] 2025-10-12 13:54:06,654 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,655 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,655 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,655 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,655 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,655 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,656 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,656 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,656 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,656 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,656 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,656 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,656 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,656 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,656 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,656 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,656 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,656 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:54:54] 2025-10-12 13:54:06,657 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,657 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:54:54] 2025-10-12 13:54:06,657 | INFO     | job 6839385181 has completed (purged errors)
[2025-10-12 09:54:54] 2025-10-12 13:54:06,657 | INFO     | overall cleanup function is called
[2025-10-12 09:54:54] 2025-10-12 13:54:07,677 | INFO     | --- collectZombieJob: --- 10, [3448677]
[2025-10-12 09:54:54] 2025-10-12 13:54:07,677 | INFO     | zombie collector waiting for pid 3448677
[2025-10-12 09:54:54] 2025-10-12 13:54:07,677 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:54:54] 2025-10-12 13:54:07,677 | INFO     | collected zombie processes
[2025-10-12 09:54:54] 2025-10-12 13:54:07,677 | INFO     | will attempt to kill all subprocesses of pid=3448677
[2025-10-12 09:54:54] 2025-10-12 13:54:10,198 | INFO     | process IDs to be killed: [3448677] (in reverse order)
[2025-10-12 09:54:54] 2025-10-12 13:54:10,602 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:54:54] 2025-10-12 13:54:10,602 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:54:54] 2025-10-12 13:54:10,713 | INFO     | did not find any defunct processes belonging to 3448677
[2025-10-12 09:54:54] 2025-10-12 13:54:10,848 | INFO     | did not find any defunct processes belonging to 3448677
[2025-10-12 09:54:54] 2025-10-12 13:54:10,849 | INFO     | ready for new job
[2025-10-12 09:54:54] 2025-10-12 13:54:10,849 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:54:54] 2025-10-12 13:54:10,872 | INFO     | ***************************************
[2025-10-12 09:54:54] 2025-10-12 13:54:10,873 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:54:54] 2025-10-12 13:54:10,873 | INFO     | ***************************************
[2025-10-12 09:54:54] 2025-10-12 13:54:10,873 | INFO     | 
[2025-10-12 09:54:54] 2025-10-12 13:54:10,919 | INFO     | architecture information:
[2025-10-12 09:54:54] 2025-10-12 13:54:10,928 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:54:54] 2025-10-12 13:54:11,095 | INFO     | cat /etc/os-release:
[2025-10-12 09:54:54] NAME="CentOS Linux"
[2025-10-12 09:54:54] VERSION="7 (Core)"
[2025-10-12 09:54:54] ID="centos"
[2025-10-12 09:54:54] ID_LIKE="rhel fedora"
[2025-10-12 09:54:54] VERSION_ID="7"
[2025-10-12 09:54:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:54:54] ANSI_COLOR="0;31"
[2025-10-12 09:54:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:54:54] HOME_URL="https://www.centos.org/"
[2025-10-12 09:54:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:54:54] 
[2025-10-12 09:54:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:54:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:54:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:54:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:54:54] 
[2025-10-12 09:54:54] 2025-10-12 13:54:11,096 | INFO     | ***************************************
[2025-10-12 09:54:54] 2025-10-12 13:54:11,400 [wrapper] supervise_pilot (15 min periods counter: 17)
[2025-10-12 09:54:54] 2025-10-12 13:54:11,600 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 09:54:54] 2025-10-12 13:54:11,780 | INFO     | sufficient remaining disk space (127358992384 B)
[2025-10-12 09:54:54] 2025-10-12 13:54:11,780 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:54:54] 2025-10-12 13:54:11,780 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:54:54] 2025-10-12 13:54:11,781 | INFO     | update_server=False
[2025-10-12 09:54:54] 2025-10-12 13:54:11,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:54:54] 2025-10-12 13:54:11,782 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:54:54] 2025-10-12 13:54:11,835 | INFO     | all payload control threads have been joined
[2025-10-12 09:54:54] 2025-10-12 13:54:12,730 | INFO     | all job control threads have been joined
[2025-10-12 09:54:54] 2025-10-12 13:54:12,734 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:54:54] 2025-10-12 13:54:12,734 | INFO     | aborting loop
[2025-10-12 09:54:54] 2025-10-12 13:54:12,753 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:54:54] 2025-10-12 13:54:12,787 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:54:54] 2025-10-12 13:54:12,788 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:54:54] 2025-10-12 13:54:12,810 | INFO     | all data control threads have been joined
[2025-10-12 09:54:54] 2025-10-12 13:54:12,841 | INFO     | [payload] control thread has finished
[2025-10-12 09:54:54] 2025-10-12 13:54:13,216 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:54:54] 2025-10-12 13:54:13,285 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:54:54] 2025-10-12 13:54:13,736 | INFO     | [job] control thread has finished
[2025-10-12 09:54:54] 2025-10-12 13:54:13,740 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:54:54] 2025-10-12 13:54:13,756 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:54:54] 2025-10-12 13:54:13,757 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:54:54] 2025-10-12 13:54:13,764 | INFO     | [job] validate thread has finished
[2025-10-12 09:54:54] 2025-10-12 13:54:13,816 | INFO     | [data] control thread has finished
[2025-10-12 09:54:54] 2025-10-12 13:54:14,139 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:54:54] 2025-10-12 13:54:14,209 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:54:54] 2025-10-12 13:54:14,210 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:54:54] 2025-10-12 13:54:14,759 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:54:54] 2025-10-12 13:54:15,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:54:54] 2025-10-12 13:54:19,269 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:54:54] 2025-10-12 13:54:38,889 | INFO     | PID=3440294 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:54:54] 2025-10-12 13:54:38,890 | INFO     | .. there are 17 such processes running
[2025-10-12 09:54:54] 2025-10-12 13:54:38,890 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:54:54] 2025-10-12 13:54:38,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:54:54] 2025-10-12 13:54:38,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:54:54] 2025-10-12 13:54:46,242 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:54:54] 2025-10-12 13:54:46,562 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140599800792896)>', '<ExcThread(monitor, started 140599151806208)>']
[2025-10-12 09:54:54] 2025-10-12 13:54:46,946 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:54:54] 2025-10-12 13:54:46,946 | INFO     | [monitor] control thread has ended
[2025-10-12 09:54:54] 2025-10-12 13:54:51,589 | INFO     | all workflow threads have been joined
[2025-10-12 09:54:54] 2025-10-12 13:54:51,589 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:54:54] 2025-10-12 13:54:51,602 | INFO     | traces error code: 0
[2025-10-12 09:54:54] 2025-10-12 13:54:51,602 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:54:54] 2025-10-12 13:54:53,146 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:54:54] 2025-10-12 13:54:53,163 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:54:54] 2025-10-12 13:54:53,175 [wrapper] pilotpid: 3440294
[2025-10-12 09:54:54] 2025-10-12 13:54:53,208 [wrapper] Pilot exit status: 0
[2025-10-12 09:54:54] 2025-10-12 13:54:53,324 [wrapper] pandaids: 6839385181
[2025-10-12 09:54:54] 2025-10-12 13:54:53,700 [wrapper] cleanup supervisor_pilot 3958405 3440295
[2025-10-12 09:54:54] 2025-10-12 13:54:53,754 [wrapper] Test setup, not cleaning
[2025-10-12 09:54:54] 2025-10-12 13:54:53,830 [wrapper] apfmon messages muted
[2025-10-12 09:54:54] 2025-10-12 13:54:53,865 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:54:54] 2025-10-12 13:54:53,896 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:54:54]  *** Error codes and diagnostics ***
[2025-10-12 09:54:54]     "exeErrorCode": 0,
[2025-10-12 09:54:54]     "exeErrorDiag": "",
[2025-10-12 09:54:54]     "pilotErrorCode": 0,
[2025-10-12 09:54:54]     "pilotErrorDiag": "",
[2025-10-12 09:54:54]  *** Listing of results directory ***
[2025-10-12 09:54:54] total 409620
[2025-10-12 09:54:54] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 00:03 queuedata.json
[2025-10-12 09:54:54] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:04 pilot3.tar.gz
[2025-10-12 09:54:54] -rwx------. 1 boincer umatlas     36292 Oct 12 00:04 runpilot2-wrapper.sh
[2025-10-12 09:54:54] -rw-r--r--. 1 boincer umatlas       100 Oct 12 05:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:54:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 05:52 run_atlas
[2025-10-12 09:54:54] -rw-r--r--. 1 boincer umatlas       105 Oct 12 05:52 job.xml
[2025-10-12 09:54:54] -rw-r--r--. 2 boincer umatlas 220137056 Oct 12 05:52 EVNT.46676267._003229.pool.root.1
[2025-10-12 09:54:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 05:52 start_atlas.sh
[2025-10-12 09:54:54] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 05:52 shared
[2025-10-12 09:54:54] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 05:52 input.tar.gz
[2025-10-12 09:54:54] -rw-r--r--. 1 boincer umatlas         0 Oct 12 05:52 boinc_lockfile
[2025-10-12 09:54:54] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 05:52 pandaJob.out
[2025-10-12 09:54:54] -rw-------. 1 boincer umatlas    975536 Oct 12 05:54 agis_schedconf.cvmfs.json
[2025-10-12 09:54:54] drwx------. 5 boincer umatlas      4096 Oct 12 05:54 pilot3
[2025-10-12 09:54:54] -rw-------. 1 boincer umatlas 190782548 Oct 12 09:51 HITS.46676269._070425.pool.root.1
[2025-10-12 09:54:54] -rw-r--r--. 1 boincer umatlas       530 Oct 12 09:52 boinc_task_state.xml
[2025-10-12 09:54:54] -rw-------. 1 boincer umatlas      1045 Oct 12 09:53 memory_monitor_summary.json
[2025-10-12 09:54:54] -rw-------. 1 boincer umatlas   1560580 Oct 12 09:53 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:54:54] -rw-------. 1 boincer umatlas    487420 Oct 12 09:53 log.46676269._070425.job.log.tgz.1
[2025-10-12 09:54:54] -rw-------. 1 boincer umatlas        95 Oct 12 09:54 pilot_heartbeat.json
[2025-10-12 09:54:54] -rw-------. 1 boincer umatlas      7837 Oct 12 09:54 heartbeat.json
[2025-10-12 09:54:54] -rw-r--r--. 1 boincer umatlas      6860 Oct 12 09:54 init_data.xml
[2025-10-12 09:54:54] -rw-r--r--. 1 boincer umatlas        28 Oct 12 09:54 wrapper_checkpoint.txt
[2025-10-12 09:54:54] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 09:54 boinc_mmap_file
[2025-10-12 09:54:54] -rw-------. 1 boincer umatlas      4825 Oct 12 09:54 pilotlog.txt
[2025-10-12 09:54:54] -rw-------. 1 boincer umatlas   1825559 Oct 12 09:54 log.46676269._070425.job.log.1
[2025-10-12 09:54:54] -rw-------. 1 boincer umatlas       357 Oct 12 09:54 output.list
[2025-10-12 09:54:54] -rw-r--r--. 1 boincer umatlas       620 Oct 12 09:54 runtime_log
[2025-10-12 09:54:54] -rw-------. 1 boincer umatlas   2334720 Oct 12 09:54 result.tar.gz
[2025-10-12 09:54:54] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 09:54 runtime_log.err
[2025-10-12 09:54:54] -rw-------. 1 boincer umatlas       657 Oct 12 09:54 mpzKDmMV2R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoViNDmVX6HIn.diag
[2025-10-12 09:54:54] -rw-r--r--. 1 boincer umatlas     21241 Oct 12 09:54 stderr.txt
[2025-10-12 09:54:54] HITS file was successfully produced:
[2025-10-12 09:54:54] -rw-------. 1 boincer umatlas 190782548 Oct 12 09:51 shared/HITS.pool.root.1
[2025-10-12 09:54:54]  *** Contents of shared directory: ***
[2025-10-12 09:54:54] total 404156
[2025-10-12 09:54:54] -rw-r--r--. 2 boincer umatlas 220137056 Oct 12 05:52 ATLAS.root_0
[2025-10-12 09:54:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 05:52 start_atlas.sh
[2025-10-12 09:54:54] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 05:52 input.tar.gz
[2025-10-12 09:54:54] -rw-------. 1 boincer umatlas 190782548 Oct 12 09:51 HITS.pool.root.1
[2025-10-12 09:54:54] -rw-------. 1 boincer umatlas   2334720 Oct 12 09:54 result.tar.gz
09:54:56 (3436267): run_atlas exited; CPU time 46459.707107
09:54:56 (3436267): called boinc_finish(0)

</stderr_txt>
]]>

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