Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:11:53 (3411918): wrapper (7.7.26015): starting
05:11:53 (3411918): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 05:11:53] Arguments: --nthreads 9
[2025-10-12 05:11:53] Threads: 9
[2025-10-12 05:11:53] Checking for CVMFS
[2025-10-12 05:11:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:11:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:11:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:11:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:11:54] 2.13.2.0 11275 64214 286288 151613 0 188 23651786 32935937 6923 16776704 10 129313837 99.624 123787694 8569 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 05:11:54] CVMFS is ok
[2025-10-12 05:11:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:11:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:11:54] Further information can be found at the LHC@home message board.
[2025-10-12 05:11:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:11:54] Checking for apptainer binary...
[2025-10-12 05:11:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:11:54] Running /usr/bin/apptainer --version
[2025-10-12 05:11:54] apptainer version 1.4.3-1.el9
[2025-10-12 05:11:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:11:54] c6-12-25-1.aglt2.org
[2025-10-12 05:11:54] apptainer works
[2025-10-12 05:11:54] Set ATHENA_PROC_NUMBER=9
[2025-10-12 05:11:54] Set ATHENA_CORE_NUMBER=9
[2025-10-12 05:11:54] Starting ATLAS job with PandaID=6839386670
[2025-10-12 05:11:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:28:42]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:28:42] 2025-10-12 12:27:35,024 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:28:42] 2025-10-12 12:27:35,024 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:28:42] 2025-10-12 12:27:35,033 | INFO     | fitting pss+swap vs Time
[2025-10-12 08:28:42] 2025-10-12 12:27:35,035 | INFO     | sum of square deviations: 2194675568.0
[2025-10-12 08:28:42] 2025-10-12 12:27:35,038 | INFO     | sum of deviations: 40014821937.5
[2025-10-12 08:28:42] 2025-10-12 12:27:35,038 | INFO     | mean x: 1760266201.5
[2025-10-12 08:28:42] 2025-10-12 12:27:35,038 | INFO     | mean y: 2131849.546875
[2025-10-12 08:28:42] 2025-10-12 12:27:35,039 | INFO     | -- intersect: -32092242208.57906
[2025-10-12 08:28:42] 2025-10-12 12:27:35,039 | INFO     | intersect: -32092242208.57906
[2025-10-12 08:28:42] 2025-10-12 12:27:35,040 | INFO     | chi2: 4.391121061412473
[2025-10-12 08:28:42] 2025-10-12 12:27:35,041 | INFO     | sum of square deviations: 2027639878.0
[2025-10-12 08:28:42] 2025-10-12 12:27:35,044 | INFO     | sum of deviations: 61293800278.0
[2025-10-12 08:28:42] 2025-10-12 12:27:35,044 | INFO     | mean x: 1760266049.0
[2025-10-12 08:28:42] 2025-10-12 12:27:35,044 | INFO     | mean y: 2150952.2620320856
[2025-10-12 08:28:42] 2025-10-12 12:27:35,044 | INFO     | -- intersect: -53209169664.480225
[2025-10-12 08:28:42] 2025-10-12 12:27:35,045 | INFO     | intersect: -53209169664.480225
[2025-10-12 08:28:42] 2025-10-12 12:27:35,046 | INFO     | chi2: 2.779832986977872
[2025-10-12 08:28:42] 2025-10-12 12:27:35,046 | INFO     | current chi2=2.779832986977872 (change=36.694230286520614 %)
[2025-10-12 08:28:42] 2025-10-12 12:27:35,047 | INFO     | sum of square deviations: 1869302025.5
[2025-10-12 08:28:42] 2025-10-12 12:27:35,050 | INFO     | sum of deviations: 59209957440.00001
[2025-10-12 08:28:42] 2025-10-12 12:27:35,050 | INFO     | mean x: 1760265896.5
[2025-10-12 08:28:42] 2025-10-12 12:27:35,050 | INFO     | mean y: 2148942.659340659
[2025-10-12 08:28:42] 2025-10-12 12:27:35,051 | INFO     | -- intersect: -55754099856.65939
[2025-10-12 08:28:42] 2025-10-12 12:27:35,051 | INFO     | intersect: -55754099856.65939
[2025-10-12 08:28:42] 2025-10-12 12:27:35,052 | INFO     | chi2: 2.7796490811046284
[2025-10-12 08:28:42] 2025-10-12 12:27:35,052 | INFO     | current chi2=2.7796490811046284 (change=0.006615716631369651 %)
[2025-10-12 08:28:42] 2025-10-12 12:27:35,052 | INFO     | right removable region: 181
[2025-10-12 08:28:42] 2025-10-12 12:27:35,053 | INFO     | sum of square deviations: 2027639878.0
[2025-10-12 08:28:42] 2025-10-12 12:27:35,056 | INFO     | sum of deviations: 615248195.9999962
[2025-10-12 08:28:42] 2025-10-12 12:27:35,057 | INFO     | mean x: 1760266354.0
[2025-10-12 08:28:42] 2025-10-12 12:27:35,057 | INFO     | mean y: 2167673.245989305
[2025-10-12 08:28:42] 2025-10-12 12:27:35,057 | INFO     | -- intersect: -531951186.08825713
[2025-10-12 08:28:42] 2025-10-12 12:27:35,057 | INFO     | intersect: -531951186.08825713
[2025-10-12 08:28:42] 2025-10-12 12:27:35,058 | INFO     | chi2: 2.1553941476183343
[2025-10-12 08:28:42] 2025-10-12 12:27:35,058 | INFO     | current chi2=2.1553941476183343 (change=50.91471818986886 %)
[2025-10-12 08:28:42] 2025-10-12 12:27:35,059 | INFO     | sum of square deviations: 1869302025.5
[2025-10-12 08:28:42] 2025-10-12 12:27:35,062 | INFO     | sum of deviations: -16267470972.000004
[2025-10-12 08:28:42] 2025-10-12 12:27:35,062 | INFO     | mean x: 1760266506.5
[2025-10-12 08:28:42] 2025-10-12 12:27:35,063 | INFO     | mean y: 2183820.835164835
[2025-10-12 08:28:42] 2025-10-12 12:27:35,063 | INFO     | -- intersect: 15320780766.030956
[2025-10-12 08:28:42] 2025-10-12 12:27:35,063 | INFO     | intersect: 15320780766.030956
[2025-10-12 08:28:42] 2025-10-12 12:27:35,064 | INFO     | chi2: 1.6982537538530345
[2025-10-12 08:28:42] 2025-10-12 12:27:35,064 | INFO     | current chi2=1.6982537538530345 (change=21.209132179858166 %)
[2025-10-12 08:28:42] 2025-10-12 12:27:35,065 | INFO     | left removable region: 20
[2025-10-12 08:28:42] 2025-10-12 12:27:35,065 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 08:28:42] 2025-10-12 12:27:35,068 | INFO     | sum of deviations: 2451756163.999999
[2025-10-12 08:28:42] 2025-10-12 12:27:35,068 | INFO     | mean x: 1760266476.0
[2025-10-12 08:28:42] 2025-10-12 12:27:35,068 | INFO     | mean y: 2207507.8695652173
[2025-10-12 08:28:42] 2025-10-12 12:27:35,068 | INFO     | -- intersect: -3332950366.0514264
[2025-10-12 08:28:42] 2025-10-12 12:27:35,069 | INFO     | intersect: -3332950366.0514264
[2025-10-12 08:28:42] 2025-10-12 12:27:35,069 | INFO     | chi2: 0.023004255033099427
[2025-10-12 08:28:42] 2025-10-12 12:27:35,070 | INFO     | -- intersect: -3332950366.0514264
[2025-10-12 08:28:42] 2025-10-12 12:27:35,070 | INFO     | current memory leak: 1.89 B/s (using 161 data points, chi2=0.02)
[2025-10-12 08:28:42] 2025-10-12 12:27:35,071 | INFO     | could have reported an average CPU frequency of 1496 MHz (10 samples)
[2025-10-12 08:28:42] 2025-10-12 12:27:35,072 | INFO     | ..............................
[2025-10-12 08:28:42] 2025-10-12 12:27:35,072 | INFO     | . Timing measurements:
[2025-10-12 08:28:42] 2025-10-12 12:27:35,072 | INFO     | . get job = 0 s
[2025-10-12 08:28:42] 2025-10-12 12:27:35,072 | INFO     | . initial setup = 3 s
[2025-10-12 08:28:42] 2025-10-12 12:27:35,072 | INFO     | . payload setup = 10 s
[2025-10-12 08:28:42] 2025-10-12 12:27:35,073 | INFO     | . stage-in = 0 s
[2025-10-12 08:28:42] 2025-10-12 12:27:35,073 | INFO     | . payload execution = 11668 s
[2025-10-12 08:28:42] 2025-10-12 12:27:35,073 | INFO     | . stage-out = 3 s
[2025-10-12 08:28:42] 2025-10-12 12:27:35,073 | INFO     | . log creation = 0 s
[2025-10-12 08:28:42] 2025-10-12 12:27:35,073 | INFO     | ..............................
[2025-10-12 08:28:42] 2025-10-12 12:27:35,379 | INFO     | 
[2025-10-12 08:28:42] 2025-10-12 12:27:35,379 | INFO     | job summary report
[2025-10-12 08:28:42] 2025-10-12 12:27:35,380 | INFO     | --------------------------------------------------
[2025-10-12 08:28:42] 2025-10-12 12:27:35,380 | INFO     | PanDA job id: 6839386670
[2025-10-12 08:28:42] 2025-10-12 12:27:35,380 | INFO     | task id: 46676269
[2025-10-12 08:28:42] 2025-10-12 12:27:35,380 | INFO     | errors: (none)
[2025-10-12 08:28:42] 2025-10-12 12:27:35,380 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:28:42] 2025-10-12 12:27:35,381 | INFO     | pilot state: finished 
[2025-10-12 08:28:42] 2025-10-12 12:27:35,381 | INFO     | transexitcode: 0
[2025-10-12 08:28:42] 2025-10-12 12:27:35,381 | INFO     | exeerrorcode: 0
[2025-10-12 08:28:42] 2025-10-12 12:27:35,381 | INFO     | exeerrordiag: 
[2025-10-12 08:28:42] 2025-10-12 12:27:35,382 | INFO     | exitcode: 0
[2025-10-12 08:28:42] 2025-10-12 12:27:35,382 | INFO     | exitmsg: OK
[2025-10-12 08:28:42] 2025-10-12 12:27:35,382 | INFO     | cpuconsumptiontime: 98454 s
[2025-10-12 08:28:42] 2025-10-12 12:27:35,382 | INFO     | nevents: 400
[2025-10-12 08:28:42] 2025-10-12 12:27:35,382 | INFO     | neventsw: 0
[2025-10-12 08:28:42] 2025-10-12 12:27:35,383 | INFO     | pid: 3434219
[2025-10-12 08:28:42] 2025-10-12 12:27:35,383 | INFO     | pgrp: 3434219
[2025-10-12 08:28:42] 2025-10-12 12:27:35,383 | INFO     | corecount: 9
[2025-10-12 08:28:42] 2025-10-12 12:27:35,383 | INFO     | event service: False
[2025-10-12 08:28:42] 2025-10-12 12:27:35,383 | INFO     | sizes: {0: 2348686, 1: 2348885, 9: 2349147, 12: 2349175, 11682: 2379049, 11686: 2388047, 11688: 2388231, 11697: 2388425}
[2025-10-12 08:28:42] 2025-10-12 12:27:35,384 | INFO     | --------------------------------------------------
[2025-10-12 08:28:42] 2025-10-12 12:27:35,384 | INFO     | 
[2025-10-12 08:28:42] 2025-10-12 12:27:35,384 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 08:28:42] 2025-10-12 12:27:35,421 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,422 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,422 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,422 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,422 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,422 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,423 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,423 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,424 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,424 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,424 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,424 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,424 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,425 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,425 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:28:42] 2025-10-12 12:27:35,425 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,426 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:28:42] 2025-10-12 12:27:35,426 | INFO     | job 6839386670 has completed (purged errors)
[2025-10-12 08:28:42] 2025-10-12 12:27:35,426 | INFO     | overall cleanup function is called
[2025-10-12 08:28:42] 2025-10-12 12:27:36,438 | INFO     | --- collectZombieJob: --- 10, [3434219]
[2025-10-12 08:28:42] 2025-10-12 12:27:36,438 | INFO     | zombie collector waiting for pid 3434219
[2025-10-12 08:28:42] 2025-10-12 12:27:36,439 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:28:42] 2025-10-12 12:27:36,439 | INFO     | collected zombie processes
[2025-10-12 08:28:42] 2025-10-12 12:27:36,439 | INFO     | will attempt to kill all subprocesses of pid=3434219
[2025-10-12 08:28:42] 2025-10-12 12:27:37,343 | INFO     | process IDs to be killed: [3434219] (in reverse order)
[2025-10-12 08:28:42] 2025-10-12 12:27:37,570 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:28:42] 2025-10-12 12:27:37,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:28:42] 2025-10-12 12:27:37,599 | INFO     | did not find any defunct processes belonging to 3434219
[2025-10-12 08:28:42] 2025-10-12 12:27:37,625 | INFO     | did not find any defunct processes belonging to 3434219
[2025-10-12 08:28:42] 2025-10-12 12:27:37,626 | INFO     | ready for new job
[2025-10-12 08:28:42] 2025-10-12 12:27:37,626 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:28:42] 2025-10-12 12:27:37,631 | INFO     | ***************************************
[2025-10-12 08:28:42] 2025-10-12 12:27:37,632 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:28:42] 2025-10-12 12:27:37,632 | INFO     | ***************************************
[2025-10-12 08:28:42] 2025-10-12 12:27:37,632 | INFO     | 
[2025-10-12 08:28:42] 2025-10-12 12:27:37,658 | INFO     | architecture information:
[2025-10-12 08:28:42] 2025-10-12 12:27:37,662 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:28:42] 2025-10-12 12:27:37,692 | INFO     | cat /etc/os-release:
[2025-10-12 08:28:42] NAME="CentOS Linux"
[2025-10-12 08:28:42] VERSION="7 (Core)"
[2025-10-12 08:28:42] ID="centos"
[2025-10-12 08:28:42] ID_LIKE="rhel fedora"
[2025-10-12 08:28:42] VERSION_ID="7"
[2025-10-12 08:28:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:28:42] ANSI_COLOR="0;31"
[2025-10-12 08:28:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:28:42] HOME_URL="https://www.centos.org/"
[2025-10-12 08:28:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:28:42] 
[2025-10-12 08:28:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:28:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:28:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:28:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:28:42] 
[2025-10-12 08:28:42] 2025-10-12 12:27:37,693 | INFO     | ***************************************
[2025-10-12 08:28:42] 2025-10-12 12:27:38,196 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 08:28:42] 2025-10-12 12:27:38,227 | INFO     | sufficient remaining disk space (71388102656 B)
[2025-10-12 08:28:42] 2025-10-12 12:27:38,228 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:28:42] 2025-10-12 12:27:38,228 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:28:42] 2025-10-12 12:27:38,229 | INFO     | update_server=False
[2025-10-12 08:28:42] 2025-10-12 12:27:38,229 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:28:42] 2025-10-12 12:27:38,230 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:28:42] 2025-10-12 12:27:38,230 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:28:42] 2025-10-12 12:27:38,230 | INFO     | aborting loop
[2025-10-12 08:28:42] 2025-10-12 12:27:38,276 | INFO     | all data control threads have been joined
[2025-10-12 08:28:42] 2025-10-12 12:27:38,460 | INFO     | all payload control threads have been joined
[2025-10-12 08:28:42] 2025-10-12 12:27:39,226 | INFO     | all job control threads have been joined
[2025-10-12 08:28:42] 2025-10-12 12:27:39,235 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:28:42] 2025-10-12 12:27:39,236 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:28:42] 2025-10-12 12:27:39,282 | INFO     | [data] control thread has finished
[2025-10-12 08:28:42] 2025-10-12 12:27:39,464 | INFO     | [payload] control thread has finished
[2025-10-12 08:28:42] 2025-10-12 12:27:39,585 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:28:42] 2025-10-12 12:27:39,752 | INFO     | [job] validate thread has finished
[2025-10-12 08:28:42] 2025-10-12 12:27:40,227 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:28:42] 2025-10-12 12:27:40,232 | INFO     | [job] control thread has finished
[2025-10-12 08:28:42] 2025-10-12 12:27:40,236 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:28:42] 2025-10-12 12:27:40,254 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:28:42] 2025-10-12 12:27:40,330 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:28:42] 2025-10-12 12:27:40,337 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:28:42] 2025-10-12 12:27:40,408 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:28:42] 2025-10-12 12:27:40,530 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:28:42] 2025-10-12 12:27:40,568 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:28:42] 2025-10-12 12:27:41,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:28:42] 2025-10-12 12:27:41,334 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:28:42] 2025-10-12 12:27:45,057 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:28:42] 2025-10-12 12:28:05,770 | INFO     | 11723s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 08:28:42] 2025-10-12 12:28:07,931 | INFO     | PID=3419290 has CPU usage=14.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 08:28:42] 2025-10-12 12:28:07,932 | INFO     | .. there are 10 such processes running
[2025-10-12 08:28:42] 2025-10-12 12:28:07,933 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:28:42] 2025-10-12 12:28:07,933 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:28:42] 2025-10-12 12:28:07,933 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:28:42] 2025-10-12 12:28:34,572 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:28:42] 2025-10-12 12:28:36,579 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140479298500416)>', '<ExcThread(monitor, started 140478649464576)>']
[2025-10-12 08:28:42] 2025-10-12 12:28:37,069 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:28:42] 2025-10-12 12:28:37,069 | INFO     | [monitor] control thread has ended
[2025-10-12 08:28:42] 2025-10-12 12:28:41,605 | INFO     | all workflow threads have been joined
[2025-10-12 08:28:42] 2025-10-12 12:28:41,606 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:28:42] 2025-10-12 12:28:41,607 | INFO     | traces error code: 0
[2025-10-12 08:28:42] 2025-10-12 12:28:41,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:28:42] 2025-10-12 12:28:41,901 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:28:42] 2025-10-12 12:28:41,906 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:28:42] 2025-10-12 12:28:41,912 [wrapper] pilotpid: 3419290
[2025-10-12 08:28:42] 2025-10-12 12:28:41,916 [wrapper] Pilot exit status: 0
[2025-10-12 08:28:42] 2025-10-12 12:28:41,937 [wrapper] pandaids: 6839386670
[2025-10-12 08:28:42] 2025-10-12 12:28:42,093 [wrapper] cleanup supervisor_pilot 3965819 3419291
[2025-10-12 08:28:42] 2025-10-12 12:28:42,099 [wrapper] Test setup, not cleaning
[2025-10-12 08:28:42] 2025-10-12 12:28:42,105 [wrapper] apfmon messages muted
[2025-10-12 08:28:42] 2025-10-12 12:28:42,111 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:28:42] 2025-10-12 12:28:42,116 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:28:42]  *** Error codes and diagnostics ***
[2025-10-12 08:28:42]     "exeErrorCode": 0,
[2025-10-12 08:28:42]     "exeErrorDiag": "",
[2025-10-12 08:28:42]     "pilotErrorCode": 0,
[2025-10-12 08:28:42]     "pilotErrorDiag": "",
[2025-10-12 08:28:42]  *** Listing of results directory ***
[2025-10-12 08:28:42] total 407616
[2025-10-12 08:28:42] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:11 pilot3.tar.gz
[2025-10-12 08:28:42] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 00:14 queuedata.json
[2025-10-12 08:28:42] -rwx------. 1 boincer umatlas     36292 Oct 12 00:15 runpilot2-wrapper.sh
[2025-10-12 08:28:42] -rw-r--r--. 1 boincer umatlas       100 Oct 12 05:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:28:42] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 05:11 run_atlas
[2025-10-12 08:28:42] -rw-r--r--. 1 boincer umatlas       105 Oct 12 05:11 job.xml
[2025-10-12 08:28:42] -rw-r--r--. 2 boincer umatlas 220641493 Oct 12 05:11 EVNT.46676267._003281.pool.root.1
[2025-10-12 08:28:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 05:11 start_atlas.sh
[2025-10-12 08:28:42] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 05:11 shared
[2025-10-12 08:28:42] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 05:11 input.tar.gz
[2025-10-12 08:28:42] -rw-r--r--. 1 boincer umatlas         0 Oct 12 05:11 boinc_lockfile
[2025-10-12 08:28:42] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 05:11 pandaJob.out
[2025-10-12 08:28:42] -rw-------. 1 boincer umatlas    975520 Oct 12 05:12 agis_schedconf.cvmfs.json
[2025-10-12 08:28:42] drwx------. 5 boincer umatlas      4096 Oct 12 05:12 pilot3
[2025-10-12 08:28:42] -rw-------. 1 boincer umatlas 188766885 Oct 12 08:26 HITS.46676269._070966.pool.root.1
[2025-10-12 08:28:42] -rw-r--r--. 1 boincer umatlas       531 Oct 12 08:26 boinc_task_state.xml
[2025-10-12 08:28:42] -rw-------. 1 boincer umatlas      1036 Oct 12 08:27 memory_monitor_summary.json
[2025-10-12 08:28:42] -rw-------. 1 boincer umatlas   1560580 Oct 12 08:27 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:28:42] -rw-------. 1 boincer umatlas    448416 Oct 12 08:27 log.46676269._070966.job.log.tgz.1
[2025-10-12 08:28:42] -rw-------. 1 boincer umatlas        95 Oct 12 08:27 pilot_heartbeat.json
[2025-10-12 08:28:42] -rw-------. 1 boincer umatlas      7825 Oct 12 08:27 heartbeat.json
[2025-10-12 08:28:42] -rw-r--r--. 1 boincer umatlas      6861 Oct 12 08:28 init_data.xml
[2025-10-12 08:28:42] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 08:28 boinc_mmap_file
[2025-10-12 08:28:42] -rw-r--r--. 1 boincer umatlas        29 Oct 12 08:28 wrapper_checkpoint.txt
[2025-10-12 08:28:42] -rw-------. 1 boincer umatlas      4941 Oct 12 08:28 pilotlog.txt
[2025-10-12 08:28:42] -rw-------. 1 boincer umatlas   1595308 Oct 12 08:28 log.46676269._070966.job.log.1
[2025-10-12 08:28:42] -rw-------. 1 boincer umatlas       357 Oct 12 08:28 output.list
[2025-10-12 08:28:42] -rw-r--r--. 1 boincer umatlas       620 Oct 12 08:28 runtime_log
[2025-10-12 08:28:42] -rw-------. 1 boincer umatlas   2058240 Oct 12 08:28 result.tar.gz
[2025-10-12 08:28:42] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 08:28 runtime_log.err
[2025-10-12 08:28:42] -rw-------. 1 boincer umatlas       657 Oct 12 08:28 3wJODmIf2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmnCTMDmokC1Nm.diag
[2025-10-12 08:28:42] -rw-r--r--. 1 boincer umatlas     20955 Oct 12 08:28 stderr.txt
[2025-10-12 08:28:42] HITS file was successfully produced:
[2025-10-12 08:28:42] -rw-------. 1 boincer umatlas 188766885 Oct 12 08:26 shared/HITS.pool.root.1
[2025-10-12 08:28:42]  *** Contents of shared directory: ***
[2025-10-12 08:28:42] total 402412
[2025-10-12 08:28:42] -rw-r--r--. 2 boincer umatlas 220641493 Oct 12 05:11 ATLAS.root_0
[2025-10-12 08:28:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 05:11 start_atlas.sh
[2025-10-12 08:28:42] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 05:11 input.tar.gz
[2025-10-12 08:28:42] -rw-------. 1 boincer umatlas 188766885 Oct 12 08:26 HITS.pool.root.1
[2025-10-12 08:28:42] -rw-------. 1 boincer umatlas   2058240 Oct 12 08:28 result.tar.gz
08:28:43 (3411918): run_atlas exited; CPU time 99692.840049
08:28:43 (3411918): called boinc_finish(0)

</stderr_txt>
]]>

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