Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:20:20 (2887276): wrapper (7.7.26015): starting
21:20:20 (2887276): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 21:20:20] Arguments: --nthreads 3
[2025-10-12 21:20:20] Threads: 3
[2025-10-12 21:20:20] Checking for CVMFS
[2025-10-12 21:20:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:20:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:20:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:20:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:20:20] 2.9.2.0 1520902 4612 88144 151633 3 57 23193555 36864000 0 130560 0 3611786 99.991 161239 1016 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 21:20:20] CVMFS is ok
[2025-10-12 21:20:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:20:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:20:20] Further information can be found at the LHC@home message board.
[2025-10-12 21:20:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:20:20] Checking for apptainer binary...
[2025-10-12 21:20:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 21:20:20] Running /usr/bin/apptainer --version
[2025-10-12 21:20:20] apptainer version 1.4.1-1.1
[2025-10-12 21:20:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:20:20] magicA250a
[2025-10-12 21:20:20] apptainer works
[2025-10-12 21:20:20] Set ATHENA_PROC_NUMBER=3
[2025-10-12 21:20:20] Set ATHENA_CORE_NUMBER=3
[2025-10-12 21:20:20] Starting ATLAS job with PandaID=6839636960
[2025-10-12 21:20:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:43:38]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:43:38] 2025-10-12 20:42:42,632 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:43:38] 2025-10-12 20:42:42,632 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:43:38] 2025-10-12 20:42:42,678 | INFO     | [job] control thread has finished
[2025-10-12 22:43:38] 2025-10-12 20:42:42,747 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:43:38] 2025-10-12 20:42:42,777 | INFO     | all payload control threads have been joined
[2025-10-12 22:43:38] 2025-10-12 20:42:42,841 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:43:38] 2025-10-12 20:42:42,911 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:43:38] 2025-10-12 20:42:42,947 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:43:38] 2025-10-12 20:42:43,023 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:43:38] 2025-10-12 20:42:43,048 | INFO     | [job] validate thread has finished
[2025-10-12 22:43:38] 2025-10-12 20:42:43,097 | INFO     | [data] control thread has finished
[2025-10-12 22:43:38] 2025-10-12 20:42:43,445 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:43:38] 2025-10-12 20:42:43,469 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:43:38] 2025-10-12 20:42:43,629 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:43:38] 2025-10-12 20:42:43,679 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:43:38] 2025-10-12 20:42:43,783 | INFO     | [payload] control thread has finished
[2025-10-12 22:43:38] 2025-10-12 20:42:44,970 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:43:38] 2025-10-12 20:42:48,976 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:43:38] 2025-10-12 20:43:12,261 | INFO     | PID=2890990 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:43:38] 2025-10-12 20:43:12,261 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:43:38] 2025-10-12 20:43:12,262 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:43:38] 2025-10-12 20:43:12,262 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:43:38] 2025-10-12 20:43:31,764 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:43:38] 2025-10-12 20:43:33,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127155562304)>', '<ExcThread(monitor, started 140126875256576)>']
[2025-10-12 22:43:38] 2025-10-12 20:43:34,377 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:43:38] 2025-10-12 20:43:34,378 | INFO     | [monitor] control thread has ended
[2025-10-12 22:43:38] 2025-10-12 20:43:38,396 | INFO     | all workflow threads have been joined
[2025-10-12 22:43:38] 2025-10-12 20:43:38,396 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:43:38] 2025-10-12 20:43:38,397 | INFO     | traces error code: 0
[2025-10-12 22:43:38] 2025-10-12 20:43:38,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:43:38] 2025-10-12 20:43:38,448 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:43:38] 2025-10-12 20:43:38,450 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:43:38] 2025-10-12 20:43:38,452 [wrapper] pilotpid: 2890990
[2025-10-12 22:43:38] 2025-10-12 20:43:38,455 [wrapper] Pilot exit status: 0
[2025-10-12 22:43:38] 2025-10-12 20:43:38,462 [wrapper] pandaids: 6839636960
[2025-10-12 22:43:38] 2025-10-12 20:43:38,478 [wrapper] cleanup supervisor_pilot 2909953 2890991
[2025-10-12 22:43:38] 2025-10-12 20:43:38,480 [wrapper] Test setup, not cleaning
[2025-10-12 22:43:38] 2025-10-12 20:43:38,483 [wrapper] apfmon messages muted
[2025-10-12 22:43:38] 2025-10-12 20:43:38,485 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:43:38] 2025-10-12 20:43:38,487 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:43:38]  *** Error codes and diagnostics ***
[2025-10-12 22:43:38]     "exeErrorCode": 0,
[2025-10-12 22:43:38]     "exeErrorDiag": "",
[2025-10-12 22:43:38]     "pilotErrorCode": 0,
[2025-10-12 22:43:38]     "pilotErrorDiag": "",
[2025-10-12 22:43:38]  *** Listing of results directory ***
[2025-10-12 22:43:38] total 410192
[2025-10-12 22:43:38] -rw-r--r-- 1 boinc boinc    557409 Oct 12 08:44 pilot3.tar.gz
[2025-10-12 22:43:38] -rw-r--r-- 1 boinc boinc      5112 Oct 12 08:52 queuedata.json
[2025-10-12 22:43:38] -rwx------ 1 boinc boinc     36292 Oct 12 08:53 runpilot2-wrapper.sh
[2025-10-12 22:43:38] -rw-r--r-- 1 boinc boinc       100 Oct 12 21:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:43:38] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 21:20 run_atlas
[2025-10-12 22:43:38] -rw-r--r-- 1 boinc boinc       105 Oct 12 21:20 job.xml
[2025-10-12 22:43:38] -rw-r--r-- 2 boinc boinc 220516402 Oct 12 21:20 EVNT.46676267._001017.pool.root.1
[2025-10-12 22:43:38] -rw-r--r-- 2 boinc boinc    569685 Oct 12 21:20 input.tar.gz
[2025-10-12 22:43:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:20 start_atlas.sh
[2025-10-12 22:43:38] drwxrwx--x 2 boinc boinc      4096 Oct 12 21:20 shared
[2025-10-12 22:43:38] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:20 boinc_setup_complete
[2025-10-12 22:43:38] -rw-r--r-- 1 boinc boinc      6442 Oct 12 21:20 init_data.xml
[2025-10-12 22:43:38] -rw-r--r-- 1 boinc boinc         0 Oct 12 21:20 boinc_lockfile
[2025-10-12 22:43:38] -rw-r--r-- 1 boinc boinc      2549 Oct 12 21:20 pandaJob.out
[2025-10-12 22:43:38] -rw------- 1 boinc boinc    975528 Oct 12 21:20 agis_schedconf.cvmfs.json
[2025-10-12 22:43:38] -rw------- 1 boinc boinc   1560580 Oct 12 21:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:43:38] drwx------ 5 boinc boinc      4096 Oct 12 21:20 pilot3
[2025-10-12 22:43:38] -rw------- 1 boinc boinc 193679748 Oct 12 22:42 HITS.46676269._073218.pool.root.1
[2025-10-12 22:43:38] -rw-r--r-- 1 boinc boinc       529 Oct 12 22:42 boinc_task_state.xml
[2025-10-12 22:43:38] -rw------- 1 boinc boinc      1023 Oct 12 22:42 memory_monitor_summary.json
[2025-10-12 22:43:38] -rw------- 1 boinc boinc    246373 Oct 12 22:42 log.46676269._073218.job.log.tgz.1
[2025-10-12 22:43:38] -rw------- 1 boinc boinc      7773 Oct 12 22:42 heartbeat.json
[2025-10-12 22:43:38] -rw------- 1 boinc boinc        95 Oct 12 22:43 pilot_heartbeat.json
[2025-10-12 22:43:38] -rw-r--r-- 1 boinc boinc        27 Oct 12 22:43 wrapper_checkpoint.txt
[2025-10-12 22:43:38] -rw-r--r-- 1 boinc boinc      8192 Oct 12 22:43 boinc_mmap_file
[2025-10-12 22:43:38] -rw------- 1 boinc boinc      4938 Oct 12 22:43 pilotlog.txt
[2025-10-12 22:43:38] -rw------- 1 boinc boinc    724968 Oct 12 22:43 log.46676269._073218.job.log.1
[2025-10-12 22:43:38] -rw------- 1 boinc boinc       357 Oct 12 22:43 output.list
[2025-10-12 22:43:38] -rw-r--r-- 1 boinc boinc       620 Oct 12 22:43 runtime_log
[2025-10-12 22:43:38] -rw------- 1 boinc boinc    993280 Oct 12 22:43 result.tar.gz
[2025-10-12 22:43:38] -rw-r--r-- 1 boinc boinc      8797 Oct 12 22:43 runtime_log.err
[2025-10-12 22:43:38] -rw------- 1 boinc boinc       662 Oct 12 22:43 GJbLDmH84R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqPTMDmHaJuan.diag
[2025-10-12 22:43:38] -rw-r--r-- 1 boinc boinc      6540 Oct 12 22:43 stderr.txt
[2025-10-12 22:43:38] HITS file was successfully produced:
[2025-10-12 22:43:38] -rw------- 1 boinc boinc 193679748 Oct 12 22:42 shared/HITS.pool.root.1
[2025-10-12 22:43:38]  *** Contents of shared directory: ***
[2025-10-12 22:43:38] total 406052
[2025-10-12 22:43:38] -rw-r--r-- 2 boinc boinc 220516402 Oct 12 21:20 ATLAS.root_0
[2025-10-12 22:43:38] -rw-r--r-- 2 boinc boinc    569685 Oct 12 21:20 input.tar.gz
[2025-10-12 22:43:38] -rw-r--r-- 2 boinc boinc     15120 Oct 12 21:20 start_atlas.sh
[2025-10-12 22:43:38] -rw------- 1 boinc boinc 193679748 Oct 12 22:42 HITS.pool.root.1
[2025-10-12 22:43:38] -rw------- 1 boinc boinc    993280 Oct 12 22:43 result.tar.gz
22:43:40 (2887276): run_atlas exited; CPU time 14172.258650
22:43:40 (2887276): called boinc_finish(0)

</stderr_txt>
]]>

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