Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:49:04 (2849142): wrapper (7.7.26015): starting
20:49:04 (2849142): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 20:49:04] Arguments: --nthreads 3
[2025-10-12 20:49:04] Threads: 3
[2025-10-12 20:49:04] Checking for CVMFS
[2025-10-12 20:49:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:49:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:49:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:49:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:49:04] 2.9.2.0 1455317 4767 67168 151633 0 56 30138385 36864000 0 130560 0 3659891 99.991 161193 991 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 20:49:04] CVMFS is ok
[2025-10-12 20:49:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:49:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:49:04] Further information can be found at the LHC@home message board.
[2025-10-12 20:49:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:49:04] Checking for apptainer binary...
[2025-10-12 20:49:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:49:04] Running /usr/bin/apptainer --version
[2025-10-12 20:49:04] apptainer version 1.4.1-1.1
[2025-10-12 20:49:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:49:04] magicA252a
[2025-10-12 20:49:04] apptainer works
[2025-10-12 20:49:04] Set ATHENA_PROC_NUMBER=3
[2025-10-12 20:49:04] Set ATHENA_CORE_NUMBER=3
[2025-10-12 20:49:04] Starting ATLAS job with PandaID=6839385108
[2025-10-12 20:49:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:23:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:23:31] 2025-10-12 20:22:52,232 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 22:23:31] 2025-10-12 20:22:52,232 | INFO     | ***************************************
[2025-10-12 22:23:31] 2025-10-12 20:22:52,233 | INFO     | 
[2025-10-12 22:23:31] 2025-10-12 20:22:52,233 | INFO     | architecture information:
[2025-10-12 22:23:31] 2025-10-12 20:22:52,233 | INFO     | executing command: cat /etc/os-release
[2025-10-12 22:23:31] 2025-10-12 20:22:52,242 | INFO     | cat /etc/os-release:
[2025-10-12 22:23:31] NAME="CentOS Linux"
[2025-10-12 22:23:31] VERSION="7 (Core)"
[2025-10-12 22:23:31] ID="centos"
[2025-10-12 22:23:31] ID_LIKE="rhel fedora"
[2025-10-12 22:23:31] VERSION_ID="7"
[2025-10-12 22:23:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 22:23:31] ANSI_COLOR="0;31"
[2025-10-12 22:23:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 22:23:31] HOME_URL="https://www.centos.org/"
[2025-10-12 22:23:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 22:23:31] 
[2025-10-12 22:23:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 22:23:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 22:23:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 22:23:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 22:23:31] 
[2025-10-12 22:23:31] 2025-10-12 20:22:52,243 | INFO     | ***************************************
[2025-10-12 22:23:31] 2025-10-12 20:22:52,746 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 22:23:31] 2025-10-12 20:22:52,759 | INFO     | sufficient remaining disk space (329884106752 B)
[2025-10-12 22:23:31] 2025-10-12 20:22:52,759 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 22:23:31] 2025-10-12 20:22:52,760 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 22:23:31] 2025-10-12 20:22:52,760 | INFO     | update_server=False
[2025-10-12 22:23:31] 2025-10-12 20:22:52,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 22:23:31] 2025-10-12 20:22:52,760 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:23:31] 2025-10-12 20:22:52,922 | INFO     | all payload control threads have been joined
[2025-10-12 22:23:31] 2025-10-12 20:22:53,144 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 22:23:31] 2025-10-12 20:22:53,144 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 22:23:31] 2025-10-12 20:22:53,144 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 22:23:31] 2025-10-12 20:22:53,145 | INFO     | will abort loop
[2025-10-12 22:23:31] 2025-10-12 20:22:53,285 | INFO     | all data control threads have been joined
[2025-10-12 22:23:31] 2025-10-12 20:22:53,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 22:23:31] 2025-10-12 20:22:53,766 | INFO     | [job] retrieve thread has finished
[2025-10-12 22:23:31] 2025-10-12 20:22:53,766 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:23:31] 2025-10-12 20:22:53,919 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:23:31] 2025-10-12 20:22:53,928 | INFO     | [payload] control thread has finished
[2025-10-12 22:23:31] 2025-10-12 20:22:53,970 | INFO     | all job control threads have been joined
[2025-10-12 22:23:31] 2025-10-12 20:22:54,150 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:23:31] 2025-10-12 20:22:54,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:23:31] 2025-10-12 20:22:54,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:23:31] 2025-10-12 20:22:54,290 | INFO     | [data] control thread has finished
[2025-10-12 22:23:31] 2025-10-12 20:22:54,436 | INFO     | [job] validate thread has finished
[2025-10-12 22:23:31] 2025-10-12 20:22:54,651 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:23:31] 2025-10-12 20:22:54,741 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:23:31] 2025-10-12 20:22:54,928 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:23:31] 2025-10-12 20:22:54,976 | INFO     | [job] control thread has finished
[2025-10-12 22:23:31] 2025-10-12 20:22:55,021 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:23:31] 2025-10-12 20:22:55,255 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:23:31] 2025-10-12 20:22:55,330 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:23:31] 2025-10-12 20:22:58,236 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:23:31] 2025-10-12 20:23:23,389 | INFO     | PID=2852874 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:23:31] 2025-10-12 20:23:23,389 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:23:31] 2025-10-12 20:23:23,389 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:23:31] 2025-10-12 20:23:23,389 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:23:31] 2025-10-12 20:23:23,828 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:23:31] 2025-10-12 20:23:25,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140592661571392)>', '<ExcThread(monitor, started 140592172484352)>']
[2025-10-12 22:23:31] 2025-10-12 20:23:26,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:23:31] 2025-10-12 20:23:26,406 | INFO     | [monitor] control thread has ended
[2025-10-12 22:23:31] 2025-10-12 20:23:30,869 | INFO     | all workflow threads have been joined
[2025-10-12 22:23:31] 2025-10-12 20:23:30,870 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:23:31] 2025-10-12 20:23:30,871 | INFO     | traces error code: 0
[2025-10-12 22:23:31] 2025-10-12 20:23:30,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:23:31] 2025-10-12 20:23:30,919 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:23:31] 2025-10-12 20:23:30,922 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:23:31] 2025-10-12 20:23:30,925 [wrapper] pilotpid: 2852874
[2025-10-12 22:23:31] 2025-10-12 20:23:30,927 [wrapper] Pilot exit status: 0
[2025-10-12 22:23:31] 2025-10-12 20:23:30,935 [wrapper] pandaids: 6839385108
[2025-10-12 22:23:31] 2025-10-12 20:23:30,951 [wrapper] cleanup supervisor_pilot 2871453 2852875
[2025-10-12 22:23:31] 2025-10-12 20:23:30,953 [wrapper] Test setup, not cleaning
[2025-10-12 22:23:31] 2025-10-12 20:23:30,956 [wrapper] apfmon messages muted
[2025-10-12 22:23:31] 2025-10-12 20:23:30,958 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:23:31] 2025-10-12 20:23:30,961 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:23:31]  *** Error codes and diagnostics ***
[2025-10-12 22:23:31]     "exeErrorCode": 0,
[2025-10-12 22:23:31]     "exeErrorDiag": "",
[2025-10-12 22:23:31]     "pilotErrorCode": 0,
[2025-10-12 22:23:31]     "pilotErrorDiag": "",
[2025-10-12 22:23:31]  *** Listing of results directory ***
[2025-10-12 22:23:31] total 417864
[2025-10-12 22:23:31] -rw-r--r-- 1 boinc boinc    557409 Oct 12 05:35 pilot3.tar.gz
[2025-10-12 22:23:31] -rwx------ 1 boinc boinc     36292 Oct 12 06:00 runpilot2-wrapper.sh
[2025-10-12 22:23:31] -rw-r--r-- 1 boinc boinc      5112 Oct 12 06:00 queuedata.json
[2025-10-12 22:23:31] -rw-r--r-- 1 boinc boinc       100 Oct 12 20:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:23:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 20:49 run_atlas
[2025-10-12 22:23:31] -rw-r--r-- 1 boinc boinc       105 Oct 12 20:49 job.xml
[2025-10-12 22:23:31] -rw-r--r-- 2 boinc boinc 222885020 Oct 12 20:49 EVNT.46676267._003227.pool.root.1
[2025-10-12 22:23:31] -rw-r--r-- 2 boinc boinc    569679 Oct 12 20:49 input.tar.gz
[2025-10-12 22:23:31] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:49 start_atlas.sh
[2025-10-12 22:23:31] drwxrwx--x 2 boinc boinc      4096 Oct 12 20:49 shared
[2025-10-12 22:23:31] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:49 boinc_setup_complete
[2025-10-12 22:23:31] -rw-r--r-- 1 boinc boinc      6200 Oct 12 20:49 init_data.xml
[2025-10-12 22:23:31] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:49 boinc_lockfile
[2025-10-12 22:23:31] -rw-r--r-- 1 boinc boinc      2547 Oct 12 20:49 pandaJob.out
[2025-10-12 22:23:31] -rw------- 1 boinc boinc    975528 Oct 12 20:49 agis_schedconf.cvmfs.json
[2025-10-12 22:23:31] -rw------- 1 boinc boinc   1560580 Oct 12 20:49 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:23:31] drwx------ 5 boinc boinc      4096 Oct 12 20:49 pilot3
[2025-10-12 22:23:31] -rw------- 1 boinc boinc 198978859 Oct 12 22:22 HITS.46676269._070352.pool.root.1
[2025-10-12 22:23:31] -rw-r--r-- 1 boinc boinc       529 Oct 12 22:22 boinc_task_state.xml
[2025-10-12 22:23:31] -rw------- 1 boinc boinc      1023 Oct 12 22:22 memory_monitor_summary.json
[2025-10-12 22:23:31] -rw------- 1 boinc boinc    249321 Oct 12 22:22 log.46676269._070352.job.log.tgz.1
[2025-10-12 22:23:31] -rw------- 1 boinc boinc        95 Oct 12 22:22 pilot_heartbeat.json
[2025-10-12 22:23:31] -rw------- 1 boinc boinc      7772 Oct 12 22:22 heartbeat.json
[2025-10-12 22:23:31] -rw-r--r-- 1 boinc boinc      8192 Oct 12 22:23 boinc_mmap_file
[2025-10-12 22:23:31] -rw-r--r-- 1 boinc boinc        27 Oct 12 22:23 wrapper_checkpoint.txt
[2025-10-12 22:23:31] -rw------- 1 boinc boinc      4938 Oct 12 22:23 pilotlog.txt
[2025-10-12 22:23:31] -rw------- 1 boinc boinc    820169 Oct 12 22:23 log.46676269._070352.job.log.1
[2025-10-12 22:23:31] -rw------- 1 boinc boinc       357 Oct 12 22:23 output.list
[2025-10-12 22:23:31] -rw-r--r-- 1 boinc boinc       620 Oct 12 22:23 runtime_log
[2025-10-12 22:23:31] -rw------- 1 boinc boinc   1085440 Oct 12 22:23 result.tar.gz
[2025-10-12 22:23:31] -rw-r--r-- 1 boinc boinc      8797 Oct 12 22:23 runtime_log.err
[2025-10-12 22:23:31] -rw------- 1 boinc boinc       662 Oct 12 22:23 knJMDmHR2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm67SMDmnMlCKo.diag
[2025-10-12 22:23:31] -rw-r--r-- 1 boinc boinc      9461 Oct 12 22:23 stderr.txt
[2025-10-12 22:23:31] HITS file was successfully produced:
[2025-10-12 22:23:31] -rw------- 1 boinc boinc 198978859 Oct 12 22:22 shared/HITS.pool.root.1
[2025-10-12 22:23:31]  *** Contents of shared directory: ***
[2025-10-12 22:23:31] total 413624
[2025-10-12 22:23:31] -rw-r--r-- 2 boinc boinc 222885020 Oct 12 20:49 ATLAS.root_0
[2025-10-12 22:23:31] -rw-r--r-- 2 boinc boinc    569679 Oct 12 20:49 input.tar.gz
[2025-10-12 22:23:31] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:49 start_atlas.sh
[2025-10-12 22:23:31] -rw------- 1 boinc boinc 198978859 Oct 12 22:22 HITS.pool.root.1
[2025-10-12 22:23:31] -rw------- 1 boinc boinc   1085440 Oct 12 22:23 result.tar.gz
22:23:32 (2849142): run_atlas exited; CPU time 16119.340188
22:23:32 (2849142): called boinc_finish(0)

</stderr_txt>
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