Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:25:05 (1868212): wrapper (7.7.26015): starting
20:25:05 (1868212): wrapper: running run_atlas (--nthreads 2)
[2025-10-12 20:25:05] Arguments: --nthreads 2
[2025-10-12 20:25:05] Threads: 2
[2025-10-12 20:25:05] Checking for CVMFS
[2025-10-12 20:25:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 20:25:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 20:25:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 20:25:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 20:25:06] 2.9.2.0 779100 4736 62300 151631 2 56 19565042 36864000 0 130560 0 2877657 99.989 162144 879 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 20:25:06] CVMFS is ok
[2025-10-12 20:25:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 20:25:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 20:25:06] Further information can be found at the LHC@home message board.
[2025-10-12 20:25:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 20:25:06] Checking for apptainer binary...
[2025-10-12 20:25:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 20:25:06] Running /usr/bin/apptainer --version
[2025-10-12 20:25:06] apptainer version 1.4.1-1.1
[2025-10-12 20:25:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 20:25:06] atlasA229
[2025-10-12 20:25:06] apptainer works
[2025-10-12 20:25:06] Set ATHENA_PROC_NUMBER=2
[2025-10-12 20:25:06] Set ATHENA_CORE_NUMBER=2
[2025-10-12 20:25:06] Starting ATLAS job with PandaID=6839592022
[2025-10-12 20:25:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 22:26:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 22:26:40] 2025-10-12 20:26:11,454 | INFO     | [job] queue monitor thread has finished
[2025-10-12 22:26:40] 2025-10-12 20:26:11,524 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 22:26:40] 2025-10-12 20:26:11,590 | INFO     | [payload] failed_post thread has finished
[2025-10-12 22:26:40] 2025-10-12 20:26:11,888 | INFO     | [job] job monitor thread has finished
[2025-10-12 22:26:40] 2025-10-12 20:26:12,068 | INFO     | all job control threads have been joined
[2025-10-12 22:26:40] 2025-10-12 20:26:12,103 | INFO     | [data] copytool_in thread has finished
[2025-10-12 22:26:40] 2025-10-12 20:26:12,253 | INFO     | [data] control thread has finished
[2025-10-12 22:26:40] 2025-10-12 20:26:12,390 | INFO     | [payload] control thread has finished
[2025-10-12 22:26:40] 2025-10-12 20:26:12,430 | INFO     | [job] validate thread has finished
[2025-10-12 22:26:40] 2025-10-12 20:26:12,453 | INFO     | [data] copytool_out thread has finished
[2025-10-12 22:26:40] 2025-10-12 20:26:12,551 | INFO     | [payload] validate_post thread has finished
[2025-10-12 22:26:40] 2025-10-12 20:26:12,560 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 22:26:40] 2025-10-12 20:26:12,711 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 22:26:40] 2025-10-12 20:26:13,074 | INFO     | [job] control thread has finished
[2025-10-12 22:26:40] 2025-10-12 20:26:13,520 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 22:26:40] 2025-10-12 20:26:17,528 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 22:26:40] 2025-10-12 20:26:20,468 | INFO     | job.realtimelogging is not enabled
[2025-10-12 22:26:40] 2025-10-12 20:26:21,474 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 22:26:40] 2025-10-12 20:26:30,141 | INFO     | [monitor] cgroup control has ended
[2025-10-12 22:26:40] 2025-10-12 20:26:31,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140461482882880)>', '<ExcThread(monitor, started 140460949477120)>']
[2025-10-12 22:26:40] 2025-10-12 20:26:36,202 | INFO     | all workflow threads have been joined
[2025-10-12 22:26:40] 2025-10-12 20:26:36,203 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 22:26:40] 2025-10-12 20:26:36,203 | INFO     | traces error code: 0
[2025-10-12 22:26:40] 2025-10-12 20:26:36,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 22:26:40] 2025-10-12 20:26:40,097 | INFO     | PID=1871915 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 22:26:40] 2025-10-12 20:26:40,097 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 22:26:40] 2025-10-12 20:26:40,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 22:26:40] 2025-10-12 20:26:40,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 22:26:40] 2025-10-12 20:26:40,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 22:26:40] 2025-10-12 20:26:40,097 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 22:26:40] 2025-10-12 20:26:40,097 | INFO     | [monitor] control thread has ended
[2025-10-12 22:26:40] 2025-10-12 20:26:40,138 [wrapper] ==== pilot stdout END ====
[2025-10-12 22:26:40] 2025-10-12 20:26:40,141 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 22:26:40] 2025-10-12 20:26:40,144 [wrapper] pilotpid: 1871915
[2025-10-12 22:26:40] 2025-10-12 20:26:40,146 [wrapper] Pilot exit status: 0
[2025-10-12 22:26:40] 2025-10-12 20:26:40,152 [wrapper] pandaids: 6839592022
[2025-10-12 22:26:40] 2025-10-12 20:26:40,164 [wrapper] cleanup supervisor_pilot 1892300 1871916
[2025-10-12 22:26:40] 2025-10-12 20:26:40,166 [wrapper] Test setup, not cleaning
[2025-10-12 22:26:40] 2025-10-12 20:26:40,168 [wrapper] apfmon messages muted
[2025-10-12 22:26:40] 2025-10-12 20:26:40,170 [wrapper] ==== wrapper stdout END ====
[2025-10-12 22:26:40] 2025-10-12 20:26:40,172 [wrapper] ==== wrapper stderr END ====
[2025-10-12 22:26:40]  *** Error codes and diagnostics ***
[2025-10-12 22:26:40]     "exeErrorCode": 0,
[2025-10-12 22:26:40]     "exeErrorDiag": "",
[2025-10-12 22:26:40]     "pilotErrorCode": 0,
[2025-10-12 22:26:40]     "pilotErrorDiag": "",
[2025-10-12 22:26:40]  *** Listing of results directory ***
[2025-10-12 22:26:40] total 410184
[2025-10-12 22:26:40] -rw-r--r-- 1 boinc boinc    557409 Oct 12 08:44 pilot3.tar.gz
[2025-10-12 22:26:40] -rwx------ 1 boinc boinc     36292 Oct 12 08:51 runpilot2-wrapper.sh
[2025-10-12 22:26:40] -rw-r--r-- 1 boinc boinc      5112 Oct 12 08:51 queuedata.json
[2025-10-12 22:26:40] -rw-r--r-- 1 boinc boinc       100 Oct 12 20:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 22:26:40] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 20:25 run_atlas
[2025-10-12 22:26:40] -rw-r--r-- 1 boinc boinc       105 Oct 12 20:25 job.xml
[2025-10-12 22:26:40] -rw-r--r-- 2 boinc boinc 222309372 Oct 12 20:25 EVNT.46676267._004529.pool.root.1
[2025-10-12 22:26:40] -rw-r--r-- 2 boinc boinc    569672 Oct 12 20:25 input.tar.gz
[2025-10-12 22:26:40] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:25 start_atlas.sh
[2025-10-12 22:26:40] drwxrwx--x 2 boinc boinc      4096 Oct 12 20:25 shared
[2025-10-12 22:26:40] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:25 boinc_setup_complete
[2025-10-12 22:26:40] -rw-r--r-- 1 boinc boinc      6206 Oct 12 20:25 init_data.xml
[2025-10-12 22:26:40] -rw-r--r-- 1 boinc boinc         0 Oct 12 20:25 boinc_lockfile
[2025-10-12 22:26:40] -rw-r--r-- 1 boinc boinc      2550 Oct 12 20:25 pandaJob.out
[2025-10-12 22:26:40] -rw------- 1 boinc boinc    975528 Oct 12 20:25 agis_schedconf.cvmfs.json
[2025-10-12 22:26:40] -rw------- 1 boinc boinc   1560580 Oct 12 20:25 agis_ddmendpoints.agis.ALL.json
[2025-10-12 22:26:40] drwx------ 5 boinc boinc      4096 Oct 12 20:25 pilot3
[2025-10-12 22:26:40] -rw------- 1 boinc boinc 191216964 Oct 12 22:25 HITS.46676269._073124.pool.root.1
[2025-10-12 22:26:40] -rw-r--r-- 1 boinc boinc       529 Oct 12 22:25 boinc_task_state.xml
[2025-10-12 22:26:40] -rw------- 1 boinc boinc        95 Oct 12 22:25 pilot_heartbeat.json
[2025-10-12 22:26:40] -rw------- 1 boinc boinc      1029 Oct 12 22:25 memory_monitor_summary.json
[2025-10-12 22:26:40] -rw------- 1 boinc boinc    264285 Oct 12 22:25 log.46676269._073124.job.log.tgz.1
[2025-10-12 22:26:40] -rw------- 1 boinc boinc      7756 Oct 12 22:26 heartbeat.json
[2025-10-12 22:26:40] -rw-r--r-- 1 boinc boinc      8192 Oct 12 22:26 boinc_mmap_file
[2025-10-12 22:26:40] -rw-r--r-- 1 boinc boinc        27 Oct 12 22:26 wrapper_checkpoint.txt
[2025-10-12 22:26:40] -rw------- 1 boinc boinc       817 Oct 12 22:26 pilotlog.txt
[2025-10-12 22:26:40] -rw------- 1 boinc boinc   1044272 Oct 12 22:26 log.46676269._073124.job.log.1
[2025-10-12 22:26:40] -rw------- 1 boinc boinc       357 Oct 12 22:26 output.list
[2025-10-12 22:26:40] -rw-r--r-- 1 boinc boinc       620 Oct 12 22:26 runtime_log
[2025-10-12 22:26:40] -rw------- 1 boinc boinc   1331200 Oct 12 22:26 result.tar.gz
[2025-10-12 22:26:40] -rw-r--r-- 1 boinc boinc      8792 Oct 12 22:26 runtime_log.err
[2025-10-12 22:26:40] -rw------- 1 boinc boinc       662 Oct 12 22:26 FcSLDmK64R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm4OTMDmX2DZMm.diag
[2025-10-12 22:26:40] -rw-r--r-- 1 boinc boinc      6625 Oct 12 22:26 stderr.txt
[2025-10-12 22:26:40] HITS file was successfully produced:
[2025-10-12 22:26:40] -rw------- 1 boinc boinc 191216964 Oct 12 22:25 shared/HITS.pool.root.1
[2025-10-12 22:26:40]  *** Contents of shared directory: ***
[2025-10-12 22:26:40] total 405720
[2025-10-12 22:26:40] -rw-r--r-- 2 boinc boinc 222309372 Oct 12 20:25 ATLAS.root_0
[2025-10-12 22:26:40] -rw-r--r-- 2 boinc boinc    569672 Oct 12 20:25 input.tar.gz
[2025-10-12 22:26:40] -rw-r--r-- 2 boinc boinc     15120 Oct 12 20:25 start_atlas.sh
[2025-10-12 22:26:40] -rw------- 1 boinc boinc 191216964 Oct 12 22:25 HITS.pool.root.1
[2025-10-12 22:26:40] -rw------- 1 boinc boinc   1331200 Oct 12 22:26 result.tar.gz
22:26:41 (1868212): run_atlas exited; CPU time 14082.424093
22:26:41 (1868212): called boinc_finish(0)

</stderr_txt>
]]>

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