Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:33:14 (3024471): wrapper (7.7.26015): starting
19:33:14 (3024471): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 19:33:14] Arguments: --nthreads 3
[2025-10-12 19:33:14] Threads: 3
[2025-10-12 19:33:14] Checking for CVMFS
[2025-10-12 19:33:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:33:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:33:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:33:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:33:15] 2.9.2.0 1670520 4441 81512 151629 3 57 30126756 36864000 0 130560 0 3545167 99.991 158765 866 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 19:33:15] CVMFS is ok
[2025-10-12 19:33:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 19:33:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 19:33:15] Further information can be found at the LHC@home message board.
[2025-10-12 19:33:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:33:15] Checking for apptainer binary...
[2025-10-12 19:33:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:33:15] Running /usr/bin/apptainer --version
[2025-10-12 19:33:15] apptainer version 1.4.1-1.1
[2025-10-12 19:33:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:33:15] magicA246
[2025-10-12 19:33:15] apptainer works
[2025-10-12 19:33:15] Set ATHENA_PROC_NUMBER=3
[2025-10-12 19:33:15] Set ATHENA_CORE_NUMBER=3
[2025-10-12 19:33:15] Starting ATLAS job with PandaID=6839385031
[2025-10-12 19:33:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:53:43]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:53:43] 2025-10-12 18:53:11,865 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 20:53:43] 2025-10-12 18:53:11,865 | INFO     | ***************************************
[2025-10-12 20:53:43] 2025-10-12 18:53:11,865 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 20:53:43] 2025-10-12 18:53:11,865 | INFO     | ***************************************
[2025-10-12 20:53:43] 2025-10-12 18:53:11,865 | INFO     | 
[2025-10-12 20:53:43] 2025-10-12 18:53:11,866 | INFO     | architecture information:
[2025-10-12 20:53:43] 2025-10-12 18:53:11,866 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:53:43] 2025-10-12 18:53:11,875 | INFO     | cat /etc/os-release:
[2025-10-12 20:53:43] NAME="CentOS Linux"
[2025-10-12 20:53:43] VERSION="7 (Core)"
[2025-10-12 20:53:43] ID="centos"
[2025-10-12 20:53:43] ID_LIKE="rhel fedora"
[2025-10-12 20:53:43] VERSION_ID="7"
[2025-10-12 20:53:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:53:43] ANSI_COLOR="0;31"
[2025-10-12 20:53:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:53:43] HOME_URL="https://www.centos.org/"
[2025-10-12 20:53:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:53:43] 
[2025-10-12 20:53:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:53:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:53:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:53:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:53:43] 
[2025-10-12 20:53:43] 2025-10-12 18:53:11,876 | INFO     | ***************************************
[2025-10-12 20:53:43] 2025-10-12 18:53:12,379 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 20:53:43] 2025-10-12 18:53:12,392 | INFO     | sufficient remaining disk space (374552395776 B)
[2025-10-12 20:53:43] 2025-10-12 18:53:12,393 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:53:43] 2025-10-12 18:53:12,393 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:53:43] 2025-10-12 18:53:12,393 | INFO     | update_server=False
[2025-10-12 20:53:43] 2025-10-12 18:53:12,393 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:53:43] 2025-10-12 18:53:12,393 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:53:43] 2025-10-12 18:53:12,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:53:43] 2025-10-12 18:53:12,495 | INFO     | all payload control threads have been joined
[2025-10-12 20:53:43] 2025-10-12 18:53:12,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:53:43] 2025-10-12 18:53:12,910 | INFO     | aborting loop
[2025-10-12 20:53:43] 2025-10-12 18:53:13,212 | INFO     | all data control threads have been joined
[2025-10-12 20:53:43] 2025-10-12 18:53:13,384 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:53:43] 2025-10-12 18:53:13,399 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:53:43] 2025-10-12 18:53:13,399 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:53:43] 2025-10-12 18:53:13,501 | INFO     | [payload] control thread has finished
[2025-10-12 20:53:43] 2025-10-12 18:53:13,714 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:53:43] 2025-10-12 18:53:13,915 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:53:43] 2025-10-12 18:53:14,023 | INFO     | all job control threads have been joined
[2025-10-12 20:53:43] 2025-10-12 18:53:14,107 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:53:43] 2025-10-12 18:53:14,218 | INFO     | [data] control thread has finished
[2025-10-12 20:53:43] 2025-10-12 18:53:14,241 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:53:43] 2025-10-12 18:53:14,311 | INFO     | [job] validate thread has finished
[2025-10-12 20:53:43] 2025-10-12 18:53:14,407 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:53:43] 2025-10-12 18:53:14,411 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:53:43] 2025-10-12 18:53:14,766 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:53:43] 2025-10-12 18:53:15,028 | INFO     | [job] control thread has finished
[2025-10-12 20:53:43] 2025-10-12 18:53:15,390 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:53:43] 2025-10-12 18:53:16,400 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:53:43] 2025-10-12 18:53:23,403 | INFO     | job.realtimelogging is not enabled
[2025-10-12 20:53:43] 2025-10-12 18:53:24,409 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:53:43] 2025-10-12 18:53:27,220 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:53:43] 2025-10-12 18:53:28,084 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140096693544768)>', '<ExcThread(monitor, started 140095910827776)>']
[2025-10-12 20:53:43] 2025-10-12 18:53:33,110 | INFO     | all workflow threads have been joined
[2025-10-12 20:53:43] 2025-10-12 18:53:33,110 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:53:43] 2025-10-12 18:53:33,110 | INFO     | traces error code: 0
[2025-10-12 20:53:43] 2025-10-12 18:53:33,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:53:43] 2025-10-12 18:53:43,160 | INFO     | PID=3028185 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:53:43] 2025-10-12 18:53:43,160 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:53:43] 2025-10-12 18:53:43,160 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:53:43] 2025-10-12 18:53:43,160 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:53:43] 2025-10-12 18:53:43,160 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:53:43] 2025-10-12 18:53:43,160 | INFO     | [monitor] control thread has ended
[2025-10-12 20:53:43] 2025-10-12 18:53:43,214 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:53:43] 2025-10-12 18:53:43,217 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:53:43] 2025-10-12 18:53:43,219 [wrapper] pilotpid: 3028185
[2025-10-12 20:53:43] 2025-10-12 18:53:43,222 [wrapper] Pilot exit status: 0
[2025-10-12 20:53:43] 2025-10-12 18:53:43,230 [wrapper] pandaids: 6839385031
[2025-10-12 20:53:43] 2025-10-12 18:53:43,247 [wrapper] cleanup supervisor_pilot 3046452 3028186
[2025-10-12 20:53:43] 2025-10-12 18:53:43,250 [wrapper] Test setup, not cleaning
[2025-10-12 20:53:43] 2025-10-12 18:53:43,253 [wrapper] apfmon messages muted
[2025-10-12 20:53:43] 2025-10-12 18:53:43,255 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:53:43] 2025-10-12 18:53:43,258 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:53:43]  *** Error codes and diagnostics ***
[2025-10-12 20:53:43]     "exeErrorCode": 0,
[2025-10-12 20:53:43]     "exeErrorDiag": "",
[2025-10-12 20:53:43]     "pilotErrorCode": 0,
[2025-10-12 20:53:43]     "pilotErrorDiag": "",
[2025-10-12 20:53:43]  *** Listing of results directory ***
[2025-10-12 20:53:43] total 404916
[2025-10-12 20:53:43] -rw-r--r-- 1 boinc boinc    557409 Oct 12 05:35 pilot3.tar.gz
[2025-10-12 20:53:43] -rw-r--r-- 1 boinc boinc      5112 Oct 12 05:55 queuedata.json
[2025-10-12 20:53:43] -rwx------ 1 boinc boinc     36292 Oct 12 05:55 runpilot2-wrapper.sh
[2025-10-12 20:53:43] -rw-r--r-- 1 boinc boinc       100 Oct 12 19:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:53:43] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 19:33 run_atlas
[2025-10-12 20:53:43] -rw-r--r-- 1 boinc boinc       105 Oct 12 19:33 job.xml
[2025-10-12 20:53:43] -rw-r--r-- 2 boinc boinc 219348419 Oct 12 19:33 EVNT.46676267._001486.pool.root.1
[2025-10-12 20:53:43] -rw-r--r-- 2 boinc boinc    569684 Oct 12 19:33 input.tar.gz
[2025-10-12 20:53:43] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:33 start_atlas.sh
[2025-10-12 20:53:43] drwxrwx--x 2 boinc boinc      4096 Oct 12 19:33 shared
[2025-10-12 20:53:43] -rw-r--r-- 1 boinc boinc         0 Oct 12 19:33 boinc_setup_complete
[2025-10-12 20:53:43] -rw-r--r-- 1 boinc boinc      6448 Oct 12 19:33 init_data.xml
[2025-10-12 20:53:43] -rw-r--r-- 1 boinc boinc         0 Oct 12 19:33 boinc_lockfile
[2025-10-12 20:53:43] -rw-r--r-- 1 boinc boinc      2549 Oct 12 19:33 pandaJob.out
[2025-10-12 20:53:43] -rw------- 1 boinc boinc    975528 Oct 12 19:33 agis_schedconf.cvmfs.json
[2025-10-12 20:53:43] -rw------- 1 boinc boinc   1560580 Oct 12 19:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:53:43] drwx------ 5 boinc boinc      4096 Oct 12 19:33 pilot3
[2025-10-12 20:53:43] -rw------- 1 boinc boinc        95 Oct 12 20:52 pilot_heartbeat.json
[2025-10-12 20:53:43] -rw------- 1 boinc boinc 189463823 Oct 12 20:52 HITS.46676269._070275.pool.root.1
[2025-10-12 20:53:43] -rw-r--r-- 1 boinc boinc       529 Oct 12 20:52 boinc_task_state.xml
[2025-10-12 20:53:43] -rw------- 1 boinc boinc      1018 Oct 12 20:53 memory_monitor_summary.json
[2025-10-12 20:53:43] -rw------- 1 boinc boinc    262772 Oct 12 20:53 log.46676269._070275.job.log.tgz.1
[2025-10-12 20:53:43] -rw------- 1 boinc boinc      7755 Oct 12 20:53 heartbeat.json
[2025-10-12 20:53:43] -rw-r--r-- 1 boinc boinc      8192 Oct 12 20:53 boinc_mmap_file
[2025-10-12 20:53:43] -rw-r--r-- 1 boinc boinc        27 Oct 12 20:53 wrapper_checkpoint.txt
[2025-10-12 20:53:43] -rw------- 1 boinc boinc       747 Oct 12 20:53 pilotlog.txt
[2025-10-12 20:53:43] -rw------- 1 boinc boinc    705084 Oct 12 20:53 log.46676269._070275.job.log.1
[2025-10-12 20:53:43] -rw------- 1 boinc boinc       357 Oct 12 20:53 output.list
[2025-10-12 20:53:43] -rw-r--r-- 1 boinc boinc       620 Oct 12 20:53 runtime_log
[2025-10-12 20:53:43] -rw------- 1 boinc boinc    983040 Oct 12 20:53 result.tar.gz
[2025-10-12 20:53:43] -rw-r--r-- 1 boinc boinc      8792 Oct 12 20:53 runtime_log.err
[2025-10-12 20:53:43] -rw------- 1 boinc boinc       661 Oct 12 20:53 6LVNDmUM2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmZ7SMDmLEhOrn.diag
[2025-10-12 20:53:43] -rw-r--r-- 1 boinc boinc      9545 Oct 12 20:53 stderr.txt
[2025-10-12 20:53:43] HITS file was successfully produced:
[2025-10-12 20:53:43] -rw------- 1 boinc boinc 189463823 Oct 12 20:52 shared/HITS.pool.root.1
[2025-10-12 20:53:43]  *** Contents of shared directory: ***
[2025-10-12 20:53:43] total 400776
[2025-10-12 20:53:43] -rw-r--r-- 2 boinc boinc 219348419 Oct 12 19:33 ATLAS.root_0
[2025-10-12 20:53:43] -rw-r--r-- 2 boinc boinc    569684 Oct 12 19:33 input.tar.gz
[2025-10-12 20:53:43] -rw-r--r-- 2 boinc boinc     15120 Oct 12 19:33 start_atlas.sh
[2025-10-12 20:53:43] -rw------- 1 boinc boinc 189463823 Oct 12 20:52 HITS.pool.root.1
[2025-10-12 20:53:43] -rw------- 1 boinc boinc    983040 Oct 12 20:53 result.tar.gz
20:53:45 (3024471): run_atlas exited; CPU time 13695.594425
20:53:45 (3024471): called boinc_finish(0)

</stderr_txt>
]]>

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