Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:35:54 (52872): wrapper (7.7.26015): starting
23:35:54 (52872): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 23:35:54] Arguments: --nthreads 3
[2025-10-12 23:35:54] Threads: 3
[2025-10-12 23:35:54] Checking for CVMFS
[2025-10-12 23:35:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:35:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:35:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:35:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:35:55] 2.9.2.0 3062 170 54648 151638 2 57 27860985 36864001 0 130560 0 131376 99.988 7975 1147 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 23:35:55] CVMFS is ok
[2025-10-12 23:35:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:35:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:35:55] Further information can be found at the LHC@home message board.
[2025-10-12 23:35:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:35:55] Checking for apptainer binary...
[2025-10-12 23:35:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:35:55] Running /usr/bin/apptainer --version
[2025-10-12 23:35:55] apptainer version 1.4.1-1.1
[2025-10-12 23:35:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:35:55] cosA125
[2025-10-12 23:35:55] apptainer works
[2025-10-12 23:35:55] Set ATHENA_PROC_NUMBER=3
[2025-10-12 23:35:55] Set ATHENA_CORE_NUMBER=3
[2025-10-12 23:35:55] Starting ATLAS job with PandaID=6839385114
[2025-10-12 23:35:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:03:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:03:11]  storage_token=
[2025-10-13 01:03:11]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6839385114/log.46676269._070358.job.log.tgz.1
[2025-10-13 01:03:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ab/e2/log.46676269._070358.job.log.tgz.1
[2025-10-13 01:03:11]  workdir=None
[2025-10-13 01:03:11] ]
[2025-10-13 01:03:11] 2025-10-12 23:02:08,253 | INFO     | transferring file log.46676269._070358.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6839385114/log.46676269._070358.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 01:03:11] 2025-10-12 23:02:08,253 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6839385114/log.46676269._070358.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0703
[2025-10-13 01:03:11] 2025-10-12 23:02:08,265 | INFO     | adding to output.list: log.46676269._070358.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ab/e2/log.46676269._070358.job.log.tg
[2025-10-13 01:03:11] 2025-10-12 23:02:08,266 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 01:03:11] 2025-10-12 23:02:08,266 | INFO     | summary of transferred files:
[2025-10-13 01:03:11] 2025-10-12 23:02:08,266 | INFO     |  -- lfn=log.46676269._070358.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 01:03:11] 2025-10-12 23:02:08,266 | INFO     | stage-out finished correctly
[2025-10-13 01:03:11] 2025-10-12 23:02:08,296 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 01:03:11] 2025-10-12 23:02:08,658 | WARNING  | process 63027 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 01:03:11] 2025-10-12 23:02:08,658 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6839385114/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:03:11] 2025-10-12 23:02:08,693 | INFO     | number of running child processes to parent process 63027: 1
[2025-10-13 01:03:11] 2025-10-12 23:02:08,693 | INFO     | maximum number of monitored processes: 6
[2025-10-13 01:03:11] 2025-10-12 23:02:09,663 | INFO     | job 6839385114 has state=finished
[2025-10-13 01:03:11] 2025-10-12 23:02:09,663 | INFO     | preparing for final server update for job 6839385114 in state='finished'
[2025-10-13 01:03:11] 2025-10-12 23:02:09,664 | INFO     | this job has now completed (state=finished)
[2025-10-13 01:03:11] 2025-10-12 23:02:09,664 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 01:03:11] 2025-10-12 23:02:09,664 | INFO     | log transfer has been attempted: DONE
[2025-10-13 01:03:11] 2025-10-12 23:02:09,664 | INFO     | job 6839385114 has finished - writing final server update
[2025-10-13 01:03:11] 2025-10-12 23:02:09,664 | INFO     | total number of processed events: 400 (read)
[2025-10-13 01:03:11] 2025-10-12 23:02:09,664 | INFO     | executing command: lscpu
[2025-10-13 01:03:11] 2025-10-12 23:02:09,680 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 01:03:11] 2025-10-12 23:02:10,142 | INFO     | time since job start (5169s) is within the limit (172800.0s)
[2025-10-13 01:03:11] 2025-10-12 23:02:11,196 | INFO     | monitor loop #397: job 0:6839385114 is in state 'finished'
[2025-10-13 01:03:11] 2025-10-12 23:02:11,196 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:03:11] 2025-10-12 23:02:12,147 | INFO     | time since job start (5171s) is within the limit (172800.0s)
[2025-10-13 01:03:11] 2025-10-12 23:02:13,210 | INFO     | PID=56589 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 01:03:11] 2025-10-12 23:02:13,699 | INFO     | monitor loop #398: job 0:6839385114 is in state 'finished'
[2025-10-13 01:03:11] 2025-10-12 23:02:13,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:03:11] 2025-10-12 23:02:13,852 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 01:03:11] 2025-10-12 23:02:13,853 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3755.5065
[2025-10-13 01:03:11] 2025-10-12 23:02:13,854 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6839385114/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:03:11] 2025-10-12 23:02:13,855 | INFO     | extracted standard info from prmon json
[2025-10-13 01:03:11] 2025-10-12 23:02:13,855 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:03:11] 2025-10-12 23:02:13,855 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:03:11] 2025-10-12 23:02:13,855 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:03:11] 2025-10-12 23:02:13,855 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:03:11] 2025-10-12 23:02:13,855 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | sum of square deviations: 147126479.5
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | sum of deviations: -10068625382.5
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | mean x: 1760307633.5
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | mean y: 2430393.5
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | -- intersect: 120469379510.34207
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | intersect: 120469379510.34207
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | chi2: 0.07050620398826703
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | -- intersect: 120469379510.34207
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | current memory leak: -68.44 B/s (using 78 data points, chi2=0.07)
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | could have reported an average CPU frequency of 3889 MHz (6 samples)
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | ..............................
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | . Timing measurements:
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | . get job = 0 s
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | . initial setup = 1 s
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | . payload setup = 2 s
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | . stage-in = 0 s
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | . payload execution = 5147 s
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | . stage-out = 0 s
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | . log creation = 0 s
[2025-10-13 01:03:11] 2025-10-12 23:02:13,856 | INFO     | ..............................
[2025-10-13 01:03:11] 2025-10-12 23:02:14,210 | INFO     | time since job start (5173s) is within the limit (172800.0s)
[2025-10-13 01:03:11] 2025-10-12 23:02:14,332 | INFO     | 
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | job summary report
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | --------------------------------------------------
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | PanDA job id: 6839385114
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | task id: 46676269
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | errors: (none)
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | pilot state: finished 
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | transexitcode: 0
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | exeerrorcode: 0
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | exeerrordiag: 
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | exitcode: 0
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | exitmsg: OK
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | cpuconsumptiontime: 14869 s
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | nevents: 400
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | neventsw: 0
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | pid: 63027
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | pgrp: 63027
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | corecount: 3
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | event service: False
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | sizes: {0: 2348860, 2: 2349122, 11: 2349150, 5154: 2384745, 5160: 2384883}
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | --------------------------------------------------
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | 
[2025-10-13 01:03:11] 2025-10-12 23:02:14,333 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 01:03:11] 2025-10-12 23:02:14,346 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,346 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,346 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,346 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | job 6839385114 has completed (purged errors)
[2025-10-13 01:03:11] 2025-10-12 23:02:14,347 | INFO     | overall cleanup function is called
[2025-10-13 01:03:11] 2025-10-12 23:02:15,354 | INFO     | --- collectZombieJob: --- 10, [63027]
[2025-10-13 01:03:11] 2025-10-12 23:02:15,354 | INFO     | zombie collector waiting for pid 63027
[2025-10-13 01:03:11] 2025-10-12 23:02:15,354 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:03:11] 2025-10-12 23:02:15,354 | INFO     | collected zombie processes
[2025-10-13 01:03:11] 2025-10-12 23:02:15,354 | INFO     | will attempt to kill all subprocesses of pid=63027
[2025-10-13 01:03:11] 2025-10-12 23:02:15,396 | INFO     | process IDs to be killed: [63027] (in reverse order)
[2025-10-13 01:03:11] 2025-10-12 23:02:15,419 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:03:11] 2025-10-12 23:02:15,419 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:03:11] 2025-10-12 23:02:15,420 | INFO     | did not find any defunct processes belonging to 63027
[2025-10-13 01:03:11] 2025-10-12 23:02:15,421 | INFO     | did not find any defunct processes belonging to 63027
[2025-10-13 01:03:11] 2025-10-12 23:02:15,421 | INFO     | ready for new job
[2025-10-13 01:03:11] 2025-10-12 23:02:15,422 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:03:11] 2025-10-12 23:02:15,422 | INFO     | ***************************************
[2025-10-13 01:03:11] 2025-10-12 23:02:15,422 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:03:11] 2025-10-12 23:02:15,422 | INFO     | ***************************************
[2025-10-13 01:03:11] 2025-10-12 23:02:15,422 | INFO     | 
[2025-10-13 01:03:11] 2025-10-12 23:02:15,423 | INFO     | architecture information:
[2025-10-13 01:03:11] 2025-10-12 23:02:15,423 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:03:11] 2025-10-12 23:02:15,431 | INFO     | cat /etc/os-release:
[2025-10-13 01:03:11] NAME="CentOS Linux"
[2025-10-13 01:03:11] VERSION="7 (Core)"
[2025-10-13 01:03:11] ID="centos"
[2025-10-13 01:03:11] ID_LIKE="rhel fedora"
[2025-10-13 01:03:11] VERSION_ID="7"
[2025-10-13 01:03:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:03:11] ANSI_COLOR="0;31"
[2025-10-13 01:03:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:03:11] HOME_URL="https://www.centos.org/"
[2025-10-13 01:03:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:03:11] 
[2025-10-13 01:03:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:03:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:03:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:03:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:03:11] 
[2025-10-13 01:03:11] 2025-10-12 23:02:15,431 | INFO     | ***************************************
[2025-10-13 01:03:11] 2025-10-12 23:02:15,934 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 01:03:11] 2025-10-12 23:02:15,947 | INFO     | sufficient remaining disk space (331992793088 B)
[2025-10-13 01:03:11] 2025-10-12 23:02:15,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:03:11] 2025-10-12 23:02:15,947 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:03:11] 2025-10-12 23:02:15,947 | INFO     | update_server=False
[2025-10-13 01:03:11] 2025-10-12 23:02:15,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:03:11] 2025-10-12 23:02:15,947 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 01:03:11] 2025-10-12 23:02:15,948 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:03:11] 2025-10-12 23:02:15,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:03:11] 2025-10-12 23:02:15,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:03:11] 2025-10-12 23:02:16,203 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 01:03:11] 2025-10-12 23:02:16,203 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 01:03:11] 2025-10-12 23:02:16,203 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:03:11] 2025-10-12 23:02:16,203 | INFO     | will abort loop
[2025-10-13 01:03:11] 2025-10-12 23:02:16,306 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:03:11] 2025-10-12 23:02:16,548 | INFO     | all data control threads have been joined
[2025-10-13 01:03:11] 2025-10-12 23:02:16,730 | INFO     | all payload control threads have been joined
[2025-10-13 01:03:11] 2025-10-12 23:02:16,745 | INFO     | all job control threads have been joined
[2025-10-13 01:03:11] 2025-10-12 23:02:16,953 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:03:11] 2025-10-12 23:02:16,988 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:03:11] 2025-10-12 23:02:17,022 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:03:11] 2025-10-12 23:02:17,209 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:03:11] 2025-10-12 23:02:17,553 | INFO     | [data] control thread has finished
[2025-10-13 01:03:11] 2025-10-12 23:02:17,736 | INFO     | [payload] control thread has finished
[2025-10-13 01:03:11] 2025-10-12 23:02:17,750 | INFO     | [job] control thread has finished
[2025-10-13 01:03:11] 2025-10-12 23:02:17,814 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:03:11] 2025-10-12 23:02:17,887 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:03:11] 2025-10-12 23:02:17,991 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:03:11] 2025-10-12 23:02:18,312 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:03:11] 2025-10-12 23:02:18,359 | INFO     | [job] validate thread has finished
[2025-10-13 01:03:11] 2025-10-12 23:02:18,368 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:03:11] 2025-10-12 23:02:18,832 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:03:11] 2025-10-12 23:02:18,897 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:03:11] 2025-10-12 23:02:19,903 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:03:11] 2025-10-12 23:02:22,839 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:03:11] 2025-10-12 23:02:26,876 | INFO     | job.realtimelogging is not enabled
[2025-10-13 01:03:11] 2025-10-12 23:02:27,882 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:03:11] 2025-10-12 23:03:06,376 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:03:11] 2025-10-12 23:03:06,683 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140327494604608)>', '<ExcThread(monitor, started 140327151187712)>']
[2025-10-13 01:03:11] 2025-10-12 23:03:07,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:03:11] 2025-10-12 23:03:07,219 | INFO     | [monitor] control thread has ended
[2025-10-13 01:03:11] 2025-10-12 23:03:11,702 | INFO     | all workflow threads have been joined
[2025-10-13 01:03:11] 2025-10-12 23:03:11,702 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:03:11] 2025-10-12 23:03:11,703 | INFO     | traces error code: 0
[2025-10-13 01:03:11] 2025-10-12 23:03:11,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:03:11] 2025-10-12 23:03:11,753 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:03:11] 2025-10-12 23:03:11,756 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:03:11] 2025-10-12 23:03:11,758 [wrapper] pilotpid: 56589
[2025-10-13 01:03:11] 2025-10-12 23:03:11,760 [wrapper] Pilot exit status: 0
[2025-10-13 01:03:11] 2025-10-12 23:03:11,768 [wrapper] pandaids: 6839385114
[2025-10-13 01:03:11] 2025-10-12 23:03:11,784 [wrapper] cleanup supervisor_pilot   75062 56590
[2025-10-13 01:03:11] 2025-10-12 23:03:11,786 [wrapper] Test setup, not cleaning
[2025-10-13 01:03:11] 2025-10-12 23:03:11,788 [wrapper] apfmon messages muted
[2025-10-13 01:03:11] 2025-10-12 23:03:11,790 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:03:11] 2025-10-12 23:03:11,793 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:03:11]  *** Error codes and diagnostics ***
[2025-10-13 01:03:11]     "exeErrorCode": 0,
[2025-10-13 01:03:11]     "exeErrorDiag": "",
[2025-10-13 01:03:11]     "pilotErrorCode": 0,
[2025-10-13 01:03:11]     "pilotErrorDiag": "",
[2025-10-13 01:03:11]  *** Listing of results directory ***
[2025-10-13 01:03:11] total 417772
[2025-10-13 01:03:11] -rw-r--r-- 1 boinc boinc    557409 Oct 12 05:35 pilot3.tar.gz
[2025-10-13 01:03:11] -rw-r--r-- 1 boinc boinc      5112 Oct 12 06:03 queuedata.json
[2025-10-13 01:03:11] -rwx------ 1 boinc boinc     36292 Oct 12 06:03 runpilot2-wrapper.sh
[2025-10-13 01:03:11] -rw-r--r-- 1 boinc boinc       100 Oct 12 23:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:03:11] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 23:35 run_atlas
[2025-10-13 01:03:11] -rw-r--r-- 1 boinc boinc       105 Oct 12 23:35 job.xml
[2025-10-13 01:03:11] -rw-r--r-- 2 boinc boinc 222885020 Oct 12 23:35 EVNT.46676267._003227.pool.root.1
[2025-10-13 01:03:11] -rw-r--r-- 2 boinc boinc    569682 Oct 12 23:35 input.tar.gz
[2025-10-13 01:03:11] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:35 start_atlas.sh
[2025-10-13 01:03:11] drwxrwx--x 2 boinc boinc      4096 Oct 12 23:35 shared
[2025-10-13 01:03:11] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:35 boinc_setup_complete
[2025-10-13 01:03:11] -rw-r--r-- 1 boinc boinc      6438 Oct 12 23:35 init_data.xml
[2025-10-13 01:03:11] -rw-r--r-- 1 boinc boinc         0 Oct 12 23:35 boinc_lockfile
[2025-10-13 01:03:11] -rw-r--r-- 1 boinc boinc      2550 Oct 12 23:35 pandaJob.out
[2025-10-13 01:03:11] -rw------- 1 boinc boinc    975528 Oct 12 23:35 agis_schedconf.cvmfs.json
[2025-10-13 01:03:11] -rw------- 1 boinc boinc   1560580 Oct 12 23:36 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:03:11] drwx------ 5 boinc boinc      4096 Oct 12 23:36 pilot3
[2025-10-13 01:03:11] -rw------- 1 boinc boinc        95 Oct 13 01:01 pilot_heartbeat.json
[2025-10-13 01:03:11] -rw------- 1 boinc boinc 198997237 Oct 13 01:01 HITS.46676269._070358.pool.root.1
[2025-10-13 01:03:11] -rw-r--r-- 1 boinc boinc       529 Oct 13 01:01 boinc_task_state.xml
[2025-10-13 01:03:11] -rw------- 1 boinc boinc      1022 Oct 13 01:02 memory_monitor_summary.json
[2025-10-13 01:03:11] -rw------- 1 boinc boinc    247883 Oct 13 01:02 log.46676269._070358.job.log.tgz.1
[2025-10-13 01:03:11] -rw------- 1 boinc boinc      7766 Oct 13 01:02 heartbeat.json
[2025-10-13 01:03:11] -rw-r--r-- 1 boinc boinc        27 Oct 13 01:03 wrapper_checkpoint.txt
[2025-10-13 01:03:11] -rw-r--r-- 1 boinc boinc      8192 Oct 13 01:03 boinc_mmap_file
[2025-10-13 01:03:11] -rw------- 1 boinc boinc      4814 Oct 13 01:03 pilotlog.txt
[2025-10-13 01:03:11] -rw------- 1 boinc boinc    754922 Oct 13 01:03 log.46676269._070358.job.log.1
[2025-10-13 01:03:11] -rw------- 1 boinc boinc       357 Oct 13 01:03 output.list
[2025-10-13 01:03:11] -rw-r--r-- 1 boinc boinc       620 Oct 13 01:03 runtime_log
[2025-10-13 01:03:11] -rw------- 1 boinc boinc   1024000 Oct 13 01:03 result.tar.gz
[2025-10-13 01:03:11] -rw-r--r-- 1 boinc boinc      8782 Oct 13 01:03 runtime_log.err
[2025-10-13 01:03:11] -rw------- 1 boinc boinc       659 Oct 13 01:03 62lMDmEU2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmP8SMDmLxgoEm.diag
[2025-10-13 01:03:11] -rw-r--r-- 1 boinc boinc     22116 Oct 13 01:03 stderr.txt
[2025-10-13 01:03:11] HITS file was successfully produced:
[2025-10-13 01:03:11] -rw------- 1 boinc boinc 198997237 Oct 13 01:01 shared/HITS.pool.root.1
[2025-10-13 01:03:11]  *** Contents of shared directory: ***
[2025-10-13 01:03:11] total 413584
[2025-10-13 01:03:11] -rw-r--r-- 2 boinc boinc 222885020 Oct 12 23:35 ATLAS.root_0
[2025-10-13 01:03:11] -rw-r--r-- 2 boinc boinc    569682 Oct 12 23:35 input.tar.gz
[2025-10-13 01:03:11] -rw-r--r-- 2 boinc boinc     15120 Oct 12 23:35 start_atlas.sh
[2025-10-13 01:03:11] -rw------- 1 boinc boinc 198997237 Oct 13 01:01 HITS.pool.root.1
[2025-10-13 01:03:11] -rw------- 1 boinc boinc   1024000 Oct 13 01:03 result.tar.gz
01:03:13 (52872): run_atlas exited; CPU time 14888.941688
01:03:13 (52872): called boinc_finish(0)

</stderr_txt>
]]>

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