Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:09:53 (2059639): wrapper (7.7.26015): starting
05:09:53 (2059639): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 05:09:53] Arguments: --nthreads 9
[2025-10-12 05:09:53] Threads: 9
[2025-10-12 05:09:53] Checking for CVMFS
[2025-10-12 05:09:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:09:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:09:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:09:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:09:54] 2.13.2.0 128665 117090 216880 151613 0 281 25230238 39288833 6392 16776704 0 76013903 99.743 52898360 36790 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 05:09:54] CVMFS is ok
[2025-10-12 05:09:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:09:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:09:54] Further information can be found at the LHC@home message board.
[2025-10-12 05:09:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:09:54] Checking for apptainer binary...
[2025-10-12 05:09:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:09:54] Running /usr/bin/apptainer --version
[2025-10-12 05:09:54] apptainer version 1.4.3-1.el9
[2025-10-12 05:09:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:09:54] c-210-2.aglt2.org
[2025-10-12 05:09:54] apptainer works
[2025-10-12 05:09:54] Set ATHENA_PROC_NUMBER=9
[2025-10-12 05:09:54] Set ATHENA_CORE_NUMBER=9
[2025-10-12 05:09:54] Starting ATLAS job with PandaID=6839591917
[2025-10-12 05:09:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:32:32]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:32:32] 2025-10-12 11:31:48,652 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 07:32:32] 2025-10-12 11:31:48,652 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 07:32:32] 2025-10-12 11:31:48,652 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 07:32:32] 2025-10-12 11:31:48,655 | INFO     | fitting pss+swap vs Time
[2025-10-12 07:32:32] 2025-10-12 11:31:48,656 | INFO     | sum of square deviations: 832729301.9712217
[2025-10-12 07:32:32] 2025-10-12 11:31:48,657 | INFO     | sum of deviations: 11859610542.496403
[2025-10-12 07:32:32] 2025-10-12 11:31:48,657 | INFO     | mean x: 1760264460.0143886
[2025-10-12 07:32:32] 2025-10-12 11:31:48,657 | INFO     | mean y: 2518914.2517985613
[2025-10-12 07:32:32] 2025-10-12 11:31:48,657 | INFO     | -- intersect: -25066913490.91393
[2025-10-12 07:32:32] 2025-10-12 11:31:48,657 | INFO     | intersect: -25066913490.91393
[2025-10-12 07:32:32] 2025-10-12 11:31:48,658 | INFO     | chi2: 2.564617688506254
[2025-10-12 07:32:32] 2025-10-12 11:31:48,658 | INFO     | sum of square deviations: 746058519.4701473
[2025-10-12 07:32:32] 2025-10-12 11:31:48,659 | INFO     | sum of deviations: 20678636804.8209
[2025-10-12 07:32:32] 2025-10-12 11:31:48,659 | INFO     | mean x: 1760264307.5149255
[2025-10-12 07:32:32] 2025-10-12 11:31:48,659 | INFO     | mean y: 2533950.0895522386
[2025-10-12 07:32:32] 2025-10-12 11:31:48,659 | INFO     | -- intersect: -48787025240.84629
[2025-10-12 07:32:32] 2025-10-12 11:31:48,659 | INFO     | intersect: -48787025240.84629
[2025-10-12 07:32:32] 2025-10-12 11:31:48,660 | INFO     | chi2: 1.8007411041407289
[2025-10-12 07:32:32] 2025-10-12 11:31:48,660 | INFO     | current chi2=1.8007411041407289 (change=29.78520298713374 %)
[2025-10-12 07:32:32] 2025-10-12 11:31:48,660 | INFO     | sum of square deviations: 665620411.9689934
[2025-10-12 07:32:32] 2025-10-12 11:31:48,661 | INFO     | sum of deviations: 19935478453.527138
[2025-10-12 07:32:32] 2025-10-12 11:31:48,661 | INFO     | mean x: 1760264155.015504
[2025-10-12 07:32:32] 2025-10-12 11:31:48,661 | INFO     | mean y: 2532540.7364341086
[2025-10-12 07:32:32] 2025-10-12 11:31:48,661 | INFO     | -- intersect: -52717767954.58913
[2025-10-12 07:32:32] 2025-10-12 11:31:48,661 | INFO     | intersect: -52717767954.58913
[2025-10-12 07:32:32] 2025-10-12 11:31:48,662 | INFO     | chi2: 1.8031536145415625
[2025-10-12 07:32:32] 2025-10-12 11:31:48,662 | INFO     | current chi2=1.8031536145415625 (change=-0.13397319555188758 %)
[2025-10-12 07:32:32] 2025-10-12 11:31:48,662 | INFO     | right removable region: 128
[2025-10-12 07:32:32] 2025-10-12 11:31:48,662 | INFO     | sum of square deviations: 746057299.4701473
[2025-10-12 07:32:32] 2025-10-12 11:31:48,663 | INFO     | sum of deviations: -13747491438.2388
[2025-10-12 07:32:32] 2025-10-12 11:31:48,663 | INFO     | mean x: 1760264612.5149255
[2025-10-12 07:32:32] 2025-10-12 11:31:48,663 | INFO     | mean y: 2563446.119402985
[2025-10-12 07:32:32] 2025-10-12 11:31:48,663 | INFO     | -- intersect: 32438708373.285263
[2025-10-12 07:32:32] 2025-10-12 11:31:48,663 | INFO     | intersect: 32438708373.285263
[2025-10-12 07:32:32] 2025-10-12 11:31:48,664 | INFO     | chi2: 0.8670803021596722
[2025-10-12 07:32:32] 2025-10-12 11:31:48,664 | INFO     | current chi2=0.8670803021596722 (change=66.19066046196157 %)
[2025-10-12 07:32:32] 2025-10-12 11:31:48,664 | INFO     | sum of square deviations: 665617971.9689934
[2025-10-12 07:32:32] 2025-10-12 11:31:48,665 | INFO     | sum of deviations: -17460724891.02326
[2025-10-12 07:32:32] 2025-10-12 11:31:48,665 | INFO     | mean x: 1760264765.015504
[2025-10-12 07:32:32] 2025-10-12 11:31:48,665 | INFO     | mean y: 2570386.511627907
[2025-10-12 07:32:32] 2025-10-12 11:31:48,665 | INFO     | -- intersect: 46178455190.78968
[2025-10-12 07:32:32] 2025-10-12 11:31:48,666 | INFO     | intersect: 46178455190.78968
[2025-10-12 07:32:32] 2025-10-12 11:31:48,666 | INFO     | chi2: 0.8120458664711386
[2025-10-12 07:32:32] 2025-10-12 11:31:48,666 | INFO     | current chi2=0.8120458664711386 (change=6.347097904479792 %)
[2025-10-12 07:32:32] 2025-10-12 11:31:48,666 | INFO     | left removable region: 20
[2025-10-12 07:32:32] 2025-10-12 11:31:48,666 | INFO     | sum of square deviations: 390587820.96296275
[2025-10-12 07:32:32] 2025-10-12 11:31:48,667 | INFO     | sum of deviations: -5619522799.925929
[2025-10-12 07:32:32] 2025-10-12 11:31:48,667 | INFO     | mean x: 1760264734.5185184
[2025-10-12 07:32:32] 2025-10-12 11:31:48,667 | INFO     | mean y: 2583895.962962963
[2025-10-12 07:32:32] 2025-10-12 11:31:48,667 | INFO     | -- intersect: 25328124731.17084
[2025-10-12 07:32:32] 2025-10-12 11:31:48,667 | INFO     | intersect: 25328124731.17084
[2025-10-12 07:32:32] 2025-10-12 11:31:48,668 | INFO     | chi2: 0.011281140100567747
[2025-10-12 07:32:32] 2025-10-12 11:31:48,668 | INFO     | -- intersect: 25328124731.17084
[2025-10-12 07:32:32] 2025-10-12 11:31:48,668 | INFO     | current memory leak: -14.39 B/s (using 108 data points, chi2=0.01)
[2025-10-12 07:32:32] 2025-10-12 11:31:48,669 | INFO     | could have reported an average CPU frequency of 2599 MHz (8 samples)
[2025-10-12 07:32:32] 2025-10-12 11:31:48,669 | INFO     | ..............................
[2025-10-12 07:32:32] 2025-10-12 11:31:48,669 | INFO     | . Timing measurements:
[2025-10-12 07:32:32] 2025-10-12 11:31:48,669 | INFO     | . get job = 0 s
[2025-10-12 07:32:32] 2025-10-12 11:31:48,669 | INFO     | . initial setup = 2 s
[2025-10-12 07:32:32] 2025-10-12 11:31:48,669 | INFO     | . payload setup = 10 s
[2025-10-12 07:32:32] 2025-10-12 11:31:48,669 | INFO     | . stage-in = 0 s
[2025-10-12 07:32:32] 2025-10-12 11:31:48,669 | INFO     | . payload execution = 8453 s
[2025-10-12 07:32:32] 2025-10-12 11:31:48,670 | INFO     | . stage-out = 0 s
[2025-10-12 07:32:32] 2025-10-12 11:31:48,670 | INFO     | . log creation = 0 s
[2025-10-12 07:32:32] 2025-10-12 11:31:48,670 | INFO     | ..............................
[2025-10-12 07:32:32] 2025-10-12 11:31:48,784 | INFO     | 
[2025-10-12 07:32:32] 2025-10-12 11:31:48,784 | INFO     | job summary report
[2025-10-12 07:32:32] 2025-10-12 11:31:48,784 | INFO     | --------------------------------------------------
[2025-10-12 07:32:32] 2025-10-12 11:31:48,784 | INFO     | PanDA job id: 6839591917
[2025-10-12 07:32:32] 2025-10-12 11:31:48,785 | INFO     | task id: 46676269
[2025-10-12 07:32:32] 2025-10-12 11:31:48,785 | INFO     | errors: (none)
[2025-10-12 07:32:32] 2025-10-12 11:31:48,785 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:32:32] 2025-10-12 11:31:48,785 | INFO     | pilot state: finished 
[2025-10-12 07:32:32] 2025-10-12 11:31:48,785 | INFO     | transexitcode: 0
[2025-10-12 07:32:32] 2025-10-12 11:31:48,785 | INFO     | exeerrorcode: 0
[2025-10-12 07:32:32] 2025-10-12 11:31:48,785 | INFO     | exeerrordiag: 
[2025-10-12 07:32:32] 2025-10-12 11:31:48,785 | INFO     | exitcode: 0
[2025-10-12 07:32:32] 2025-10-12 11:31:48,785 | INFO     | exitmsg: OK
[2025-10-12 07:32:32] 2025-10-12 11:31:48,786 | INFO     | cpuconsumptiontime: 47103 s
[2025-10-12 07:32:32] 2025-10-12 11:31:48,786 | INFO     | nevents: 400
[2025-10-12 07:32:32] 2025-10-12 11:31:48,786 | INFO     | neventsw: 0
[2025-10-12 07:32:32] 2025-10-12 11:31:48,786 | INFO     | pid: 2073422
[2025-10-12 07:32:32] 2025-10-12 11:31:48,786 | INFO     | pgrp: 2073422
[2025-10-12 07:32:32] 2025-10-12 11:31:48,786 | INFO     | corecount: 9
[2025-10-12 07:32:32] 2025-10-12 11:31:48,786 | INFO     | event service: False
[2025-10-12 07:32:32] 2025-10-12 11:31:48,786 | INFO     | sizes: {0: 2348855, 1: 2348855, 8: 2349145, 12: 2349173, 8468: 2377219, 8471: 2386217, 8473: 2386401, 8477: 2386595}
[2025-10-12 07:32:32] 2025-10-12 11:31:48,787 | INFO     | --------------------------------------------------
[2025-10-12 07:32:32] 2025-10-12 11:31:48,787 | INFO     | 
[2025-10-12 07:32:32] 2025-10-12 11:31:48,787 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 07:32:32] 2025-10-12 11:31:48,807 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,808 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,808 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,808 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,808 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,808 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,808 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,808 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,808 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,809 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,809 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,809 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,810 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:32:32] 2025-10-12 11:31:48,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,810 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:32:32] 2025-10-12 11:31:48,810 | INFO     | job 6839591917 has completed (purged errors)
[2025-10-12 07:32:32] 2025-10-12 11:31:48,810 | INFO     | overall cleanup function is called
[2025-10-12 07:32:32] 2025-10-12 11:31:49,818 | INFO     | --- collectZombieJob: --- 10, [2073422]
[2025-10-12 07:32:32] 2025-10-12 11:31:49,818 | INFO     | zombie collector waiting for pid 2073422
[2025-10-12 07:32:32] 2025-10-12 11:31:49,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:32:32] 2025-10-12 11:31:49,819 | INFO     | collected zombie processes
[2025-10-12 07:32:32] 2025-10-12 11:31:49,819 | INFO     | will attempt to kill all subprocesses of pid=2073422
[2025-10-12 07:32:32] 2025-10-12 11:31:50,053 | INFO     | process IDs to be killed: [2073422] (in reverse order)
[2025-10-12 07:32:32] 2025-10-12 11:31:50,127 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:32:32] 2025-10-12 11:31:50,127 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:32:32] 2025-10-12 11:31:50,135 | INFO     | did not find any defunct processes belonging to 2073422
[2025-10-12 07:32:32] 2025-10-12 11:31:50,164 | INFO     | did not find any defunct processes belonging to 2073422
[2025-10-12 07:32:32] 2025-10-12 11:31:50,165 | INFO     | ready for new job
[2025-10-12 07:32:32] 2025-10-12 11:31:50,165 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:32:32] 2025-10-12 11:31:50,167 | INFO     | ***************************************
[2025-10-12 07:32:32] 2025-10-12 11:31:50,168 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:32:32] 2025-10-12 11:31:50,168 | INFO     | ***************************************
[2025-10-12 07:32:32] 2025-10-12 11:31:50,168 | INFO     | 
[2025-10-12 07:32:32] 2025-10-12 11:31:50,170 | INFO     | architecture information:
[2025-10-12 07:32:32] 2025-10-12 11:31:50,171 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:32:32] 2025-10-12 11:31:50,188 | INFO     | cat /etc/os-release:
[2025-10-12 07:32:32] NAME="CentOS Linux"
[2025-10-12 07:32:32] VERSION="7 (Core)"
[2025-10-12 07:32:32] ID="centos"
[2025-10-12 07:32:32] ID_LIKE="rhel fedora"
[2025-10-12 07:32:32] VERSION_ID="7"
[2025-10-12 07:32:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:32:32] ANSI_COLOR="0;31"
[2025-10-12 07:32:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:32:32] HOME_URL="https://www.centos.org/"
[2025-10-12 07:32:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:32:32] 
[2025-10-12 07:32:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:32:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:32:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:32:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:32:32] 
[2025-10-12 07:32:32] 2025-10-12 11:31:50,189 | INFO     | ***************************************
[2025-10-12 07:32:32] 2025-10-12 11:31:50,692 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 07:32:32] 2025-10-12 11:31:50,712 | INFO     | sufficient remaining disk space (52485423104 B)
[2025-10-12 07:32:32] 2025-10-12 11:31:50,713 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:32:32] 2025-10-12 11:31:50,713 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:32:32] 2025-10-12 11:31:50,713 | INFO     | update_server=False
[2025-10-12 07:32:32] 2025-10-12 11:31:50,713 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:32:32] 2025-10-12 11:31:50,713 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:32:32] 2025-10-12 11:31:50,713 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:32:32] 2025-10-12 11:31:50,714 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:32:32] 2025-10-12 11:31:50,828 | INFO     | all data control threads have been joined
[2025-10-12 07:32:32] 2025-10-12 11:31:50,998 | INFO     | all payload control threads have been joined
[2025-10-12 07:32:32] 2025-10-12 11:31:51,508 | INFO     | all job control threads have been joined
[2025-10-12 07:32:32] 2025-10-12 11:31:51,666 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:32:32] 2025-10-12 11:31:51,666 | INFO     | aborting loop
[2025-10-12 07:32:32] 2025-10-12 11:31:51,718 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:32:32] 2025-10-12 11:31:51,719 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:32:32] 2025-10-12 11:31:51,834 | INFO     | [data] control thread has finished
[2025-10-12 07:32:32] 2025-10-12 11:31:51,956 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:32:32] 2025-10-12 11:31:52,003 | INFO     | [payload] control thread has finished
[2025-10-12 07:32:32] 2025-10-12 11:31:52,213 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:32:32] 2025-10-12 11:31:52,284 | INFO     | [job] validate thread has finished
[2025-10-12 07:32:32] 2025-10-12 11:31:52,307 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:32:32] 2025-10-12 11:31:52,408 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:32:32] 2025-10-12 11:31:52,513 | INFO     | [job] control thread has finished
[2025-10-12 07:32:32] 2025-10-12 11:31:52,672 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:32:32] 2025-10-12 11:31:52,695 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:32:32] 2025-10-12 11:31:52,719 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:32:32] 2025-10-12 11:31:52,719 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:32:32] 2025-10-12 11:31:53,111 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:32:32] 2025-10-12 11:31:54,720 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:32:32] 2025-10-12 11:32:21,339 | INFO     | PID=2064886 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 07:32:32] 2025-10-12 11:32:21,340 | INFO     | .. there are 7 such processes running
[2025-10-12 07:32:32] 2025-10-12 11:32:21,340 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:32:32] 2025-10-12 11:32:21,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:32:32] 2025-10-12 11:32:21,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:32:32] 2025-10-12 11:32:25,843 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:32:32] 2025-10-12 11:32:26,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139659612809024)>', '<ExcThread(monitor, started 139659331995392)>']
[2025-10-12 07:32:32] 2025-10-12 11:32:27,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:32:32] 2025-10-12 11:32:27,372 | INFO     | [monitor] control thread has ended
[2025-10-12 07:32:32] 2025-10-12 11:32:32,023 | INFO     | all workflow threads have been joined
[2025-10-12 07:32:32] 2025-10-12 11:32:32,024 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:32:32] 2025-10-12 11:32:32,024 | INFO     | traces error code: 0
[2025-10-12 07:32:32] 2025-10-12 11:32:32,024 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:32:32] 2025-10-12 11:32:32,203 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:32:32] 2025-10-12 11:32:32,206 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:32:32] 2025-10-12 11:32:32,209 [wrapper] pilotpid: 2064886
[2025-10-12 07:32:32] 2025-10-12 11:32:32,213 [wrapper] Pilot exit status: 0
[2025-10-12 07:32:32] 2025-10-12 11:32:32,224 [wrapper] pandaids: 6839591917
[2025-10-12 07:32:32] 2025-10-12 11:32:32,275 [wrapper] cleanup supervisor_pilot 2318948 2064887
[2025-10-12 07:32:32] 2025-10-12 11:32:32,279 [wrapper] Test setup, not cleaning
[2025-10-12 07:32:32] 2025-10-12 11:32:32,282 [wrapper] apfmon messages muted
[2025-10-12 07:32:32] 2025-10-12 11:32:32,285 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:32:32] 2025-10-12 11:32:32,289 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:32:32]  *** Error codes and diagnostics ***
[2025-10-12 07:32:32]     "exeErrorCode": 0,
[2025-10-12 07:32:32]     "exeErrorDiag": "",
[2025-10-12 07:32:32]     "pilotErrorCode": 0,
[2025-10-12 07:32:32]     "pilotErrorDiag": "",
[2025-10-12 07:32:32]  *** Listing of results directory ***
[2025-10-12 07:32:32] total 407912
[2025-10-12 07:32:32] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 02:44 pilot3.tar.gz
[2025-10-12 07:32:32] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 02:45 queuedata.json
[2025-10-12 07:32:32] -rwx------. 1 boincer umatlas     36292 Oct 12 02:45 runpilot2-wrapper.sh
[2025-10-12 07:32:32] -rw-r--r--. 1 boincer umatlas       100 Oct 12 05:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:32:32] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 05:09 run_atlas
[2025-10-12 07:32:32] -rw-r--r--. 1 boincer umatlas       105 Oct 12 05:09 job.xml
[2025-10-12 07:32:32] -rw-r--r--. 2 boincer umatlas 220942872 Oct 12 05:09 EVNT.46676267._004524.pool.root.1
[2025-10-12 07:32:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 05:09 start_atlas.sh
[2025-10-12 07:32:32] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 05:09 shared
[2025-10-12 07:32:32] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 05:09 input.tar.gz
[2025-10-12 07:32:32] -rw-r--r--. 1 boincer umatlas         0 Oct 12 05:09 boinc_lockfile
[2025-10-12 07:32:32] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 05:09 pandaJob.out
[2025-10-12 07:32:32] -rw-------. 1 boincer umatlas    975520 Oct 12 05:10 agis_schedconf.cvmfs.json
[2025-10-12 07:32:32] -rw-------. 1 boincer umatlas   1560580 Oct 12 05:10 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:32:32] drwx------. 5 boincer umatlas      4096 Oct 12 05:10 pilot3
[2025-10-12 07:32:32] -rw-r--r--. 1 boincer umatlas      6657 Oct 12 07:27 init_data.xml
[2025-10-12 07:32:32] -rw-------. 1 boincer umatlas 189696920 Oct 12 07:31 HITS.46676269._073019.pool.root.1
[2025-10-12 07:32:32] -rw-r--r--. 1 boincer umatlas       529 Oct 12 07:31 boinc_task_state.xml
[2025-10-12 07:32:32] -rw-------. 1 boincer umatlas      1043 Oct 12 07:31 memory_monitor_summary.json
[2025-10-12 07:32:32] -rw-------. 1 boincer umatlas    385028 Oct 12 07:31 log.46676269._073019.job.log.tgz.1
[2025-10-12 07:32:32] -rw-------. 1 boincer umatlas        95 Oct 12 07:31 pilot_heartbeat.json
[2025-10-12 07:32:32] -rw-------. 1 boincer umatlas      7823 Oct 12 07:31 heartbeat.json
[2025-10-12 07:32:32] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 07:32 boinc_mmap_file
[2025-10-12 07:32:32] -rw-r--r--. 1 boincer umatlas        27 Oct 12 07:32 wrapper_checkpoint.txt
[2025-10-12 07:32:32] -rw-------. 1 boincer umatlas      4823 Oct 12 07:32 pilotlog.txt
[2025-10-12 07:32:32] -rw-------. 1 boincer umatlas   1192173 Oct 12 07:32 log.46676269._073019.job.log.1
[2025-10-12 07:32:32] -rw-------. 1 boincer umatlas       357 Oct 12 07:32 output.list
[2025-10-12 07:32:32] -rw-r--r--. 1 boincer umatlas       620 Oct 12 07:32 runtime_log
[2025-10-12 07:32:32] -rw-------. 1 boincer umatlas   1597440 Oct 12 07:32 result.tar.gz
[2025-10-12 07:32:32] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 07:32 runtime_log.err
[2025-10-12 07:32:32] -rw-------. 1 boincer umatlas       651 Oct 12 07:32 0KxNDmI14R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAwiNDmne9L3n.diag
[2025-10-12 07:32:32] -rw-r--r--. 1 boincer umatlas     20974 Oct 12 07:32 stderr.txt
[2025-10-12 07:32:32] HITS file was successfully produced:
[2025-10-12 07:32:32] -rw-------. 1 boincer umatlas 189696920 Oct 12 07:31 shared/HITS.pool.root.1
[2025-10-12 07:32:32]  *** Contents of shared directory: ***
[2025-10-12 07:32:32] total 403160
[2025-10-12 07:32:32] -rw-r--r--. 2 boincer umatlas 220942872 Oct 12 05:09 ATLAS.root_0
[2025-10-12 07:32:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 05:09 start_atlas.sh
[2025-10-12 07:32:32] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 05:09 input.tar.gz
[2025-10-12 07:32:32] -rw-------. 1 boincer umatlas 189696920 Oct 12 07:31 HITS.pool.root.1
[2025-10-12 07:32:32] -rw-------. 1 boincer umatlas   1597440 Oct 12 07:32 result.tar.gz
07:32:33 (2059639): run_atlas exited; CPU time 47258.975370
07:32:33 (2059639): called boinc_finish(0)

</stderr_txt>
]]>

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