Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:59:03 (2260): wrapper (7.7.26015): starting
04:59:03 (2260): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 04:59:03] Arguments: --nthreads 8
[2025-10-12 04:59:03] Threads: 8
[2025-10-12 04:59:03] Checking for CVMFS
[2025-10-12 04:59:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:59:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:59:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:59:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:59:03] 2.11.2.0 2830 8288 74292 151613 2 58 16142130 20275200 1 130560 0 4954215 99.988 278845 35136 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 04:59:03] CVMFS is ok
[2025-10-12 04:59:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:59:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 04:59:03] Further information can be found at the LHC@home message board.
[2025-10-12 04:59:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:59:03] Checking for apptainer binary...
[2025-10-12 04:59:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:59:03] Running /usr/bin/apptainer --version
[2025-10-12 04:59:03] apptainer version 1.3.2-1.el7
[2025-10-12 04:59:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:59:05] c-204-20.aglt2.org
[2025-10-12 04:59:05] apptainer works
[2025-10-12 04:59:05] Set ATHENA_PROC_NUMBER=8
[2025-10-12 04:59:05] Set ATHENA_CORE_NUMBER=8
[2025-10-12 04:59:05] Starting ATLAS job with PandaID=6839385038
[2025-10-12 04:59:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:01:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:01:40] 2025-10-12 11:00:43,119 | INFO     | -- intersect: 6303554680.980945
[2025-10-12 07:01:40] 2025-10-12 11:00:43,119 | INFO     | intersect: 6303554680.980945
[2025-10-12 07:01:40] 2025-10-12 11:00:43,119 | INFO     | chi2: 0.040113258343354045
[2025-10-12 07:01:40] 2025-10-12 11:00:43,119 | INFO     | current chi2=0.040113258343354045 (change=38.30289146532759 %)
[2025-10-12 07:01:40] 2025-10-12 11:00:43,119 | INFO     | sum of square deviations: 348769330.0
[2025-10-12 07:01:40] 2025-10-12 11:00:43,120 | INFO     | sum of deviations: 1653573116.0000002
[2025-10-12 07:01:40] 2025-10-12 11:00:43,120 | INFO     | mean x: 1760263650.5
[2025-10-12 07:01:40] 2025-10-12 11:00:43,120 | INFO     | mean y: 2521284.423076923
[2025-10-12 07:01:40] 2025-10-12 11:00:43,120 | INFO     | -- intersect: -8343180012.014946
[2025-10-12 07:01:40] 2025-10-12 11:00:43,120 | INFO     | intersect: -8343180012.014946
[2025-10-12 07:01:40] 2025-10-12 11:00:43,120 | INFO     | chi2: 0.0004330768000198769
[2025-10-12 07:01:40] 2025-10-12 11:00:43,121 | INFO     | current chi2=0.0004330768000198769 (change=98.92036494190299 %)
[2025-10-12 07:01:40] 2025-10-12 11:00:43,121 | INFO     | sum of square deviations: 300842850.0
[2025-10-12 07:01:40] 2025-10-12 11:00:43,121 | INFO     | sum of deviations: 1189588205.9999993
[2025-10-12 07:01:40] 2025-10-12 11:00:43,121 | INFO     | mean x: 1760263803.0
[2025-10-12 07:01:40] 2025-10-12 11:00:43,122 | INFO     | mean y: 2522753.9191919193
[2025-10-12 07:01:40] 2025-10-12 11:00:43,122 | INFO     | -- intersect: -6957885510.719659
[2025-10-12 07:01:40] 2025-10-12 11:00:43,122 | INFO     | intersect: -6957885510.719659
[2025-10-12 07:01:40] 2025-10-12 11:00:43,122 | INFO     | chi2: 0.00019520704084796602
[2025-10-12 07:01:40] 2025-10-12 11:00:43,122 | INFO     | current chi2=0.00019520704084796602 (change=54.925537262904264 %)
[2025-10-12 07:01:40] 2025-10-12 11:00:43,122 | INFO     | sum of square deviations: 257521107.5
[2025-10-12 07:01:40] 2025-10-12 11:00:43,123 | INFO     | sum of deviations: 891190602.0000001
[2025-10-12 07:01:40] 2025-10-12 11:00:43,123 | INFO     | mean x: 1760263955.5
[2025-10-12 07:01:40] 2025-10-12 11:00:43,123 | INFO     | mean y: 2523803.6170212766
[2025-10-12 07:01:40] 2025-10-12 11:00:43,123 | INFO     | -- intersect: -6089134893.450932
[2025-10-12 07:01:40] 2025-10-12 11:00:43,123 | INFO     | intersect: -6089134893.450932
[2025-10-12 07:01:40] 2025-10-12 11:00:43,124 | INFO     | chi2: 0.0001258373168808452
[2025-10-12 07:01:40] 2025-10-12 11:00:43,124 | INFO     | current chi2=0.0001258373168808452 (change=35.536486627625465 %)
[2025-10-12 07:01:40] 2025-10-12 11:00:43,124 | INFO     | sum of square deviations: 218571540.0
[2025-10-12 07:01:40] 2025-10-12 11:00:43,124 | INFO     | sum of deviations: 665039445.9999999
[2025-10-12 07:01:40] 2025-10-12 11:00:43,124 | INFO     | mean x: 1760264108.0
[2025-10-12 07:01:40] 2025-10-12 11:00:43,125 | INFO     | mean y: 2524682.8988764044
[2025-10-12 07:01:40] 2025-10-12 11:00:43,125 | INFO     | -- intersect: -5353365050.9521265
[2025-10-12 07:01:40] 2025-10-12 11:00:43,125 | INFO     | intersect: -5353365050.9521265
[2025-10-12 07:01:40] 2025-10-12 11:00:43,125 | INFO     | chi2: 7.230289086673315e-05
[2025-10-12 07:01:40] 2025-10-12 11:00:43,125 | INFO     | current chi2=7.230289086673315e-05 (change=42.54256792903774 %)
[2025-10-12 07:01:40] 2025-10-12 11:00:43,125 | INFO     | sum of square deviations: 183761585.0
[2025-10-12 07:01:40] 2025-10-12 11:00:43,126 | INFO     | sum of deviations: 570341094.0
[2025-10-12 07:01:40] 2025-10-12 11:00:43,126 | INFO     | mean x: 1760264260.5
[2025-10-12 07:01:40] 2025-10-12 11:00:43,126 | INFO     | mean y: 2525098.0
[2025-10-12 07:01:40] 2025-10-12 11:00:43,126 | INFO     | -- intersect: -5460809603.116509
[2025-10-12 07:01:40] 2025-10-12 11:00:43,126 | INFO     | intersect: -5460809603.116509
[2025-10-12 07:01:40] 2025-10-12 11:00:43,126 | INFO     | chi2: 7.1609393426535e-05
[2025-10-12 07:01:40] 2025-10-12 11:00:43,127 | INFO     | current chi2=7.1609393426535e-05 (change=0.9591558952689576 %)
[2025-10-12 07:01:40] 2025-10-12 11:00:43,127 | INFO     | left removable region: 70
[2025-10-12 07:01:40] 2025-10-12 11:00:43,127 | INFO     | sum of square deviations: 24640462.0
[2025-10-12 07:01:40] 2025-10-12 11:00:43,127 | INFO     | sum of deviations: 108953319.99999999
[2025-10-12 07:01:40] 2025-10-12 11:00:43,127 | INFO     | mean x: 1760265145.0
[2025-10-12 07:01:40] 2025-10-12 11:00:43,127 | INFO     | mean y: 2527838.7209302327
[2025-10-12 07:01:40] 2025-10-12 11:00:43,127 | INFO     | -- intersect: -7780878642.376355
[2025-10-12 07:01:40] 2025-10-12 11:00:43,128 | INFO     | intersect: -7780878642.376355
[2025-10-12 07:01:40] 2025-10-12 11:00:43,128 | INFO     | chi2: 2.8448708994032848e-05
[2025-10-12 07:01:40] 2025-10-12 11:00:43,128 | INFO     | -- intersect: -7780878642.376355
[2025-10-12 07:01:40] 2025-10-12 11:00:43,128 | INFO     | current memory leak: 4.42 B/s (using 43 data points, chi2=0.00)
[2025-10-12 07:01:40] 2025-10-12 11:00:43,128 | INFO     | could have reported an average CPU frequency of 1952 MHz (7 samples)
[2025-10-12 07:01:40] 2025-10-12 11:00:43,129 | INFO     | ..............................
[2025-10-12 07:01:40] 2025-10-12 11:00:43,129 | INFO     | . Timing measurements:
[2025-10-12 07:01:40] 2025-10-12 11:00:43,129 | INFO     | . get job = 0 s
[2025-10-12 07:01:40] 2025-10-12 11:00:43,129 | INFO     | . initial setup = 2 s
[2025-10-12 07:01:40] 2025-10-12 11:00:43,129 | INFO     | . payload setup = 8 s
[2025-10-12 07:01:40] 2025-10-12 11:00:43,129 | INFO     | . stage-in = 0 s
[2025-10-12 07:01:40] 2025-10-12 11:00:43,129 | INFO     | . payload execution = 7240 s
[2025-10-12 07:01:40] 2025-10-12 11:00:43,129 | INFO     | . stage-out = 0 s
[2025-10-12 07:01:40] 2025-10-12 11:00:43,129 | INFO     | . log creation = 0 s
[2025-10-12 07:01:40] 2025-10-12 11:00:43,130 | INFO     | ..............................
[2025-10-12 07:01:40] 2025-10-12 11:00:43,220 | INFO     | 
[2025-10-12 07:01:40] 2025-10-12 11:00:43,221 | INFO     | job summary report
[2025-10-12 07:01:40] 2025-10-12 11:00:43,221 | INFO     | --------------------------------------------------
[2025-10-12 07:01:40] 2025-10-12 11:00:43,221 | INFO     | PanDA job id: 6839385038
[2025-10-12 07:01:40] 2025-10-12 11:00:43,221 | INFO     | task id: 46676269
[2025-10-12 07:01:40] 2025-10-12 11:00:43,222 | INFO     | errors: (none)
[2025-10-12 07:01:40] 2025-10-12 11:00:43,222 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:01:40] 2025-10-12 11:00:43,222 | INFO     | pilot state: finished 
[2025-10-12 07:01:40] 2025-10-12 11:00:43,222 | INFO     | transexitcode: 0
[2025-10-12 07:01:40] 2025-10-12 11:00:43,222 | INFO     | exeerrorcode: 0
[2025-10-12 07:01:40] 2025-10-12 11:00:43,222 | INFO     | exeerrordiag: 
[2025-10-12 07:01:40] 2025-10-12 11:00:43,223 | INFO     | exitcode: 0
[2025-10-12 07:01:40] 2025-10-12 11:00:43,223 | INFO     | exitmsg: OK
[2025-10-12 07:01:40] 2025-10-12 11:00:43,223 | INFO     | cpuconsumptiontime: 54536 s
[2025-10-12 07:01:40] 2025-10-12 11:00:43,223 | INFO     | nevents: 400
[2025-10-12 07:01:40] 2025-10-12 11:00:43,223 | INFO     | neventsw: 0
[2025-10-12 07:01:40] 2025-10-12 11:00:43,223 | INFO     | pid: 12343
[2025-10-12 07:01:40] 2025-10-12 11:00:43,224 | INFO     | pgrp: 12343
[2025-10-12 07:01:40] 2025-10-12 11:00:43,224 | INFO     | corecount: 8
[2025-10-12 07:01:40] 2025-10-12 11:00:43,224 | INFO     | event service: False
[2025-10-12 07:01:40] 2025-10-12 11:00:43,224 | INFO     | sizes: {0: 2348634, 1: 2348833, 6: 2349095, 12: 2349123, 7252: 2376404, 7253: 2385402, 7256: 2385586, 7263: 2385808}
[2025-10-12 07:01:40] 2025-10-12 11:00:43,224 | INFO     | --------------------------------------------------
[2025-10-12 07:01:40] 2025-10-12 11:00:43,224 | INFO     | 
[2025-10-12 07:01:40] 2025-10-12 11:00:43,225 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 07:01:40] 2025-10-12 11:00:43,253 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,254 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,255 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,256 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,256 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,256 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,256 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:01:40] 2025-10-12 11:00:43,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,257 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:01:40] 2025-10-12 11:00:43,257 | INFO     | job 6839385038 has completed (purged errors)
[2025-10-12 07:01:40] 2025-10-12 11:00:43,257 | INFO     | overall cleanup function is called
[2025-10-12 07:01:40] 2025-10-12 11:00:44,262 | INFO     | --- collectZombieJob: --- 10, [12343]
[2025-10-12 07:01:40] 2025-10-12 11:00:44,262 | INFO     | zombie collector waiting for pid 12343
[2025-10-12 07:01:40] 2025-10-12 11:00:44,263 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:01:40] 2025-10-12 11:00:44,263 | INFO     | collected zombie processes
[2025-10-12 07:01:40] 2025-10-12 11:00:44,263 | INFO     | will attempt to kill all subprocesses of pid=12343
[2025-10-12 07:01:40] 2025-10-12 11:00:44,351 | INFO     | process IDs to be killed: [12343] (in reverse order)
[2025-10-12 07:01:40] 2025-10-12 11:00:44,409 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:01:40] 2025-10-12 11:00:44,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:01:40] 2025-10-12 11:00:44,414 | INFO     | did not find any defunct processes belonging to 12343
[2025-10-12 07:01:40] 2025-10-12 11:00:44,418 | INFO     | did not find any defunct processes belonging to 12343
[2025-10-12 07:01:40] 2025-10-12 11:00:44,418 | INFO     | ready for new job
[2025-10-12 07:01:40] 2025-10-12 11:00:44,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:01:40] 2025-10-12 11:00:44,420 | INFO     | ***************************************
[2025-10-12 07:01:40] 2025-10-12 11:00:44,420 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:01:40] 2025-10-12 11:00:44,420 | INFO     | ***************************************
[2025-10-12 07:01:40] 2025-10-12 11:00:44,420 | INFO     | 
[2025-10-12 07:01:40] 2025-10-12 11:00:44,421 | INFO     | architecture information:
[2025-10-12 07:01:40] 2025-10-12 11:00:44,421 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:01:40] 2025-10-12 11:00:44,439 | INFO     | cat /etc/os-release:
[2025-10-12 07:01:40] NAME="CentOS Linux"
[2025-10-12 07:01:40] VERSION="7 (Core)"
[2025-10-12 07:01:40] ID="centos"
[2025-10-12 07:01:40] ID_LIKE="rhel fedora"
[2025-10-12 07:01:40] VERSION_ID="7"
[2025-10-12 07:01:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:01:40] ANSI_COLOR="0;31"
[2025-10-12 07:01:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:01:40] HOME_URL="https://www.centos.org/"
[2025-10-12 07:01:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:01:40] 
[2025-10-12 07:01:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:01:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:01:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:01:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:01:40] 
[2025-10-12 07:01:40] 2025-10-12 11:00:44,439 | INFO     | ***************************************
[2025-10-12 07:01:40] 2025-10-12 11:00:44,943 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 07:01:40] 2025-10-12 11:00:44,963 | INFO     | sufficient remaining disk space (18699255808 B)
[2025-10-12 07:01:40] 2025-10-12 11:00:44,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:01:40] 2025-10-12 11:00:44,964 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:01:40] 2025-10-12 11:00:44,965 | INFO     | update_server=False
[2025-10-12 07:01:40] 2025-10-12 11:00:44,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:01:40] 2025-10-12 11:00:44,965 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:01:40] 2025-10-12 11:00:45,377 | INFO     | all job control threads have been joined
[2025-10-12 07:01:40] 2025-10-12 11:00:45,667 | INFO     | all data control threads have been joined
[2025-10-12 07:01:40] 2025-10-12 11:00:45,683 | INFO     | all payload control threads have been joined
[2025-10-12 07:01:40] 2025-10-12 11:00:45,768 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:01:40] 2025-10-12 11:00:45,768 | INFO     | aborting loop
[2025-10-12 07:01:40] 2025-10-12 11:00:45,971 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:01:40] 2025-10-12 11:00:45,971 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:01:40] 2025-10-12 11:00:46,048 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:01:40] 2025-10-12 11:00:46,224 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:01:40] 2025-10-12 11:00:46,339 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:01:40] 2025-10-12 11:00:46,381 | INFO     | [job] control thread has finished
[2025-10-12 07:01:40] 2025-10-12 11:00:46,392 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:01:40] 2025-10-12 11:00:46,528 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:01:40] 2025-10-12 11:00:46,673 | INFO     | [data] control thread has finished
[2025-10-12 07:01:40] 2025-10-12 11:00:46,688 | INFO     | [payload] control thread has finished
[2025-10-12 07:01:40] 2025-10-12 11:00:46,721 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:01:40] 2025-10-12 11:00:46,773 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:01:40] 2025-10-12 11:00:46,778 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:01:40] 2025-10-12 11:00:46,866 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:01:40] 2025-10-12 11:00:47,432 | INFO     | [job] validate thread has finished
[2025-10-12 07:01:40] 2025-10-12 11:00:48,226 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:01:40] 2025-10-12 11:00:50,345 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:01:40] 2025-10-12 11:00:55,596 | INFO     | job.realtimelogging is not enabled
[2025-10-12 07:01:40] 2025-10-12 11:00:56,602 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:01:40] 2025-10-12 11:01:15,535 | INFO     | PID=5961 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 07:01:40] 2025-10-12 11:01:15,536 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:01:40] 2025-10-12 11:01:15,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:01:40] 2025-10-12 11:01:15,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:01:40] 2025-10-12 11:01:34,381 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:01:40] 2025-10-12 11:01:34,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139683236345664)>', '<ExcThread(monitor, started 139682495047424)>']
[2025-10-12 07:01:40] 2025-10-12 11:01:35,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:01:40] 2025-10-12 11:01:35,633 | INFO     | [monitor] control thread has ended
[2025-10-12 07:01:40] 2025-10-12 11:01:39,678 | INFO     | all workflow threads have been joined
[2025-10-12 07:01:40] 2025-10-12 11:01:39,678 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:01:40] 2025-10-12 11:01:39,679 | INFO     | traces error code: 0
[2025-10-12 07:01:40] 2025-10-12 11:01:39,679 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:01:40] 2025-10-12 11:01:39,791 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:01:40] 2025-10-12 11:01:39,795 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:01:40] 2025-10-12 11:01:39,799 [wrapper] pilotpid: 5961
[2025-10-12 07:01:40] 2025-10-12 11:01:39,804 [wrapper] Pilot exit status: 0
[2025-10-12 07:01:40] 2025-10-12 11:01:39,823 [wrapper] pandaids: 6839385038
[2025-10-12 07:01:40] 2025-10-12 11:01:39,876 [wrapper] cleanup supervisor_pilot 28238 5962
[2025-10-12 07:01:40] 2025-10-12 11:01:39,881 [wrapper] Test setup, not cleaning
[2025-10-12 07:01:40] 2025-10-12 11:01:39,885 [wrapper] apfmon messages muted
[2025-10-12 07:01:40] 2025-10-12 11:01:39,890 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:01:40] 2025-10-12 11:01:39,894 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:01:40]  *** Error codes and diagnostics ***
[2025-10-12 07:01:40]     "exeErrorCode": 0,
[2025-10-12 07:01:40]     "exeErrorDiag": "",
[2025-10-12 07:01:40]     "pilotErrorCode": 0,
[2025-10-12 07:01:40]     "pilotErrorDiag": "",
[2025-10-12 07:01:40]  *** Listing of results directory ***
[2025-10-12 07:01:40] total 415580
[2025-10-12 07:01:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 23:35 pilot3.tar.gz
[2025-10-12 07:01:40] -rwx------ 1 boincer umatlas     36292 Oct 11 23:55 runpilot2-wrapper.sh
[2025-10-12 07:01:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 23:55 queuedata.json
[2025-10-12 07:01:40] -rw-r--r-- 1 boincer umatlas       100 Oct 12 04:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:01:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 04:59 run_atlas
[2025-10-12 07:01:40] -rw-r--r-- 1 boincer umatlas       105 Oct 12 04:59 job.xml
[2025-10-12 07:01:40] -rw-r--r-- 2 boincer umatlas 221124280 Oct 12 04:59 EVNT.46676267._001613.pool.root.1
[2025-10-12 07:01:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 04:59 start_atlas.sh
[2025-10-12 07:01:40] drwxrwx--x 2 boincer umatlas      4096 Oct 12 04:59 shared
[2025-10-12 07:01:40] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 04:59 input.tar.gz
[2025-10-12 07:01:40] -rw-r--r-- 1 boincer umatlas         0 Oct 12 04:59 boinc_lockfile
[2025-10-12 07:01:40] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 04:59 pandaJob.out
[2025-10-12 07:01:40] -rw------- 1 boincer umatlas    975520 Oct 12 04:59 agis_schedconf.cvmfs.json
[2025-10-12 07:01:40] -rw------- 1 boincer umatlas   1560580 Oct 12 04:59 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:01:40] drwx------ 5 boincer umatlas      4096 Oct 12 04:59 pilot3
[2025-10-12 07:01:40] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 06:54 init_data.xml
[2025-10-12 07:01:40] -rw------- 1 boincer umatlas 197775190 Oct 12 06:59 HITS.46676269._070282.pool.root.1
[2025-10-12 07:01:40] -rw-r--r-- 1 boincer umatlas       529 Oct 12 07:00 boinc_task_state.xml
[2025-10-12 07:01:40] -rw------- 1 boincer umatlas      1051 Oct 12 07:00 memory_monitor_summary.json
[2025-10-12 07:01:40] -rw------- 1 boincer umatlas    349016 Oct 12 07:00 log.46676269._070282.job.log.tgz.1
[2025-10-12 07:01:40] -rw------- 1 boincer umatlas      7840 Oct 12 07:00 heartbeat.json
[2025-10-12 07:01:40] -rw------- 1 boincer umatlas        95 Oct 12 07:01 pilot_heartbeat.json
[2025-10-12 07:01:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 07:01 boinc_mmap_file
[2025-10-12 07:01:40] -rw-r--r-- 1 boincer umatlas        27 Oct 12 07:01 wrapper_checkpoint.txt
[2025-10-12 07:01:40] -rw------- 1 boincer umatlas      4817 Oct 12 07:01 pilotlog.txt
[2025-10-12 07:01:40] -rw------- 1 boincer umatlas   1029496 Oct 12 07:01 log.46676269._070282.job.log.1
[2025-10-12 07:01:40] -rw------- 1 boincer umatlas       357 Oct 12 07:01 output.list
[2025-10-12 07:01:40] -rw-r--r-- 1 boincer umatlas       620 Oct 12 07:01 runtime_log
[2025-10-12 07:01:40] -rw------- 1 boincer umatlas   1392640 Oct 12 07:01 result.tar.gz
[2025-10-12 07:01:40] -rw------- 1 boincer umatlas       659 Oct 12 07:01 XClNDmOM2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmO6SMDmWhwoMn.diag
[2025-10-12 07:01:40] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 07:01 runtime_log.err
[2025-10-12 07:01:40] -rw-r--r-- 1 boincer umatlas     20912 Oct 12 07:01 stderr.txt
[2025-10-12 07:01:40] HITS file was successfully produced:
[2025-10-12 07:01:40] -rw------- 1 boincer umatlas 197775190 Oct 12 06:59 shared/HITS.pool.root.1
[2025-10-12 07:01:40]  *** Contents of shared directory: ***
[2025-10-12 07:01:40] total 411024
[2025-10-12 07:01:40] -rw-r--r-- 2 boincer umatlas 221124280 Oct 12 04:59 ATLAS.root_0
[2025-10-12 07:01:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 04:59 start_atlas.sh
[2025-10-12 07:01:40] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 04:59 input.tar.gz
[2025-10-12 07:01:40] -rw------- 1 boincer umatlas 197775190 Oct 12 06:59 HITS.pool.root.1
[2025-10-12 07:01:40] -rw------- 1 boincer umatlas   1392640 Oct 12 07:01 result.tar.gz
07:01:41 (2260): run_atlas exited; CPU time 54544.668094
07:01:41 (2260): called boinc_finish(0)

</stderr_txt>
]]>

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