Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:21:09 (3637335): wrapper (7.7.26015): starting
06:21:09 (3637335): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 06:21:09] Arguments: --nthreads 9
[2025-10-12 06:21:09] Threads: 9
[2025-10-12 06:21:09] Checking for CVMFS
[2025-10-12 06:21:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:21:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:21:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:21:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:21:10] 2.13.2.0 864990 129116 386652 151617 3 134 32292224 40960000 20034 16776704 0 190248476 99.687 163433131 30834 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 06:21:10] CVMFS is ok
[2025-10-12 06:21:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:21:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:21:10] Further information can be found at the LHC@home message board.
[2025-10-12 06:21:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:21:10] Checking for apptainer binary...
[2025-10-12 06:21:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:21:10] Running /usr/bin/apptainer --version
[2025-10-12 06:21:10] apptainer version 1.4.3-1.el9
[2025-10-12 06:21:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:21:10] c6-5-37-3.aglt2.org
[2025-10-12 06:21:10] apptainer works
[2025-10-12 06:21:10] Set ATHENA_PROC_NUMBER=9
[2025-10-12 06:21:10] Set ATHENA_CORE_NUMBER=9
[2025-10-12 06:21:10] Starting ATLAS job with PandaID=6839385020
[2025-10-12 06:21:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:34:15]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:34:15] 2025-10-12 14:33:22,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:34:15] 2025-10-12 14:33:22,405 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:34:15] 2025-10-12 14:33:22,405 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:34:15] 2025-10-12 14:33:22,413 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:34:15] 2025-10-12 14:33:22,414 | INFO     | sum of square deviations: 4672569105.522264
[2025-10-12 10:34:15] 2025-10-12 14:33:22,415 | INFO     | sum of deviations: -6549923504.951426
[2025-10-12 10:34:15] 2025-10-12 14:33:22,415 | INFO     | mean x: 1760272069.4696357
[2025-10-12 10:34:15] 2025-10-12 14:33:22,415 | INFO     | mean y: 2190459.206477733
[2025-10-12 10:34:15] 2025-10-12 14:33:22,415 | INFO     | -- intersect: 2469708251.3569183
[2025-10-12 10:34:15] 2025-10-12 14:33:22,415 | INFO     | intersect: 2469708251.3569183
[2025-10-12 10:34:15] 2025-10-12 14:33:22,416 | INFO     | chi2: 2.557002298344276
[2025-10-12 10:34:15] 2025-10-12 14:33:22,416 | INFO     | sum of square deviations: 4394528633.851226
[2025-10-12 10:34:15] 2025-10-12 14:33:22,421 | INFO     | sum of deviations: 9263711995.958673
[2025-10-12 10:34:15] 2025-10-12 14:33:22,422 | INFO     | mean x: 1760271916.9752066
[2025-10-12 10:34:15] 2025-10-12 14:33:22,422 | INFO     | mean y: 2198994.326446281
[2025-10-12 10:34:15] 2025-10-12 14:33:22,422 | INFO     | -- intersect: -3708472486.5285454
[2025-10-12 10:34:15] 2025-10-12 14:33:22,422 | INFO     | intersect: -3708472486.5285454
[2025-10-12 10:34:15] 2025-10-12 14:33:22,422 | INFO     | chi2: 1.7749857914496232
[2025-10-12 10:34:15] 2025-10-12 14:33:22,422 | INFO     | current chi2=1.7749857914496232 (change=30.583332185545096 %)
[2025-10-12 10:34:15] 2025-10-12 14:33:22,422 | INFO     | sum of square deviations: 4127758705.198326
[2025-10-12 10:34:15] 2025-10-12 14:33:22,424 | INFO     | sum of deviations: 9847475102.962017
[2025-10-12 10:34:15] 2025-10-12 14:33:22,424 | INFO     | mean x: 1760271764.485232
[2025-10-12 10:34:15] 2025-10-12 14:33:22,424 | INFO     | mean y: 2199331.417721519
[2025-10-12 10:34:15] 2025-10-12 14:33:22,424 | INFO     | -- intersect: -4197230338.098894
[2025-10-12 10:34:15] 2025-10-12 14:33:22,424 | INFO     | intersect: -4197230338.098894
[2025-10-12 10:34:15] 2025-10-12 14:33:22,424 | INFO     | chi2: 1.7747530328817718
[2025-10-12 10:34:15] 2025-10-12 14:33:22,424 | INFO     | current chi2=1.7747530328817718 (change=0.013113263721471213 %)
[2025-10-12 10:34:15] 2025-10-12 14:33:22,429 | INFO     | right removable region: 236
[2025-10-12 10:34:15] 2025-10-12 14:33:22,429 | INFO     | sum of square deviations: 4394472696.89667
[2025-10-12 10:34:15] 2025-10-12 14:33:22,430 | INFO     | sum of deviations: -45062260678.743805
[2025-10-12 10:34:15] 2025-10-12 14:33:22,430 | INFO     | mean x: 1760272221.979339
[2025-10-12 10:34:15] 2025-10-12 14:33:22,431 | INFO     | mean y: 2211448.8512396696
[2025-10-12 10:34:15] 2025-10-12 14:33:22,431 | INFO     | -- intersect: 18052578626.783825
[2025-10-12 10:34:15] 2025-10-12 14:33:22,431 | INFO     | intersect: 18052578626.783825
[2025-10-12 10:34:15] 2025-10-12 14:33:22,431 | INFO     | chi2: 1.0041694536073187
[2025-10-12 10:34:15] 2025-10-12 14:33:22,431 | INFO     | current chi2=1.0041694536073187 (change=60.72864485661418 %)
[2025-10-12 10:34:15] 2025-10-12 14:33:22,431 | INFO     | sum of square deviations: 4127632313.223624
[2025-10-12 10:34:15] 2025-10-12 14:33:22,437 | INFO     | sum of deviations: -42820897921.83545
[2025-10-12 10:34:15] 2025-10-12 14:33:22,437 | INFO     | mean x: 1760272374.4894514
[2025-10-12 10:34:15] 2025-10-12 14:33:22,437 | INFO     | mean y: 2210143.265822785
[2025-10-12 10:34:15] 2025-10-12 14:33:22,437 | INFO     | -- intersect: 18263634112.92453
[2025-10-12 10:34:15] 2025-10-12 14:33:22,437 | INFO     | intersect: 18263634112.92453
[2025-10-12 10:34:15] 2025-10-12 14:33:22,437 | INFO     | chi2: 0.9888024450837574
[2025-10-12 10:34:15] 2025-10-12 14:33:22,438 | INFO     | current chi2=0.9888024450837574 (change=1.5303202530566722 %)
[2025-10-12 10:34:15] 2025-10-12 14:33:22,438 | INFO     | left removable region: 20
[2025-10-12 10:34:15] 2025-10-12 14:33:22,438 | INFO     | sum of square deviations: 3124780955.9814987
[2025-10-12 10:34:15] 2025-10-12 14:33:22,439 | INFO     | sum of deviations: -15477269798.722212
[2025-10-12 10:34:15] 2025-10-12 14:33:22,439 | INFO     | mean x: 1760272344.0092592
[2025-10-12 10:34:15] 2025-10-12 14:33:22,439 | INFO     | mean y: 2214606.361111111
[2025-10-12 10:34:15] 2025-10-12 14:33:22,439 | INFO     | -- intersect: 8720972935.743917
[2025-10-12 10:34:15] 2025-10-12 14:33:22,439 | INFO     | intersect: 8720972935.743917
[2025-10-12 10:34:15] 2025-10-12 14:33:22,440 | INFO     | chi2: 0.16469069700624184
[2025-10-12 10:34:15] 2025-10-12 14:33:22,440 | INFO     | -- intersect: 8720972935.743917
[2025-10-12 10:34:15] 2025-10-12 14:33:22,440 | INFO     | current memory leak: -4.95 B/s (using 216 data points, chi2=0.16)
[2025-10-12 10:34:15] 2025-10-12 14:33:22,440 | INFO     | could have reported an average CPU frequency of 2904 MHz (12 samples)
[2025-10-12 10:34:15] 2025-10-12 14:33:22,440 | INFO     | ..............................
[2025-10-12 10:34:15] 2025-10-12 14:33:22,445 | INFO     | . Timing measurements:
[2025-10-12 10:34:15] 2025-10-12 14:33:22,445 | INFO     | . get job = 0 s
[2025-10-12 10:34:15] 2025-10-12 14:33:22,445 | INFO     | . initial setup = 3 s
[2025-10-12 10:34:15] 2025-10-12 14:33:22,445 | INFO     | . payload setup = 15 s
[2025-10-12 10:34:15] 2025-10-12 14:33:22,445 | INFO     | . stage-in = 0 s
[2025-10-12 10:34:15] 2025-10-12 14:33:22,445 | INFO     | . payload execution = 15034 s
[2025-10-12 10:34:15] 2025-10-12 14:33:22,445 | INFO     | . stage-out = 2 s
[2025-10-12 10:34:15] 2025-10-12 14:33:22,445 | INFO     | . log creation = 0 s
[2025-10-12 10:34:15] 2025-10-12 14:33:22,445 | INFO     | ..............................
[2025-10-12 10:34:15] 2025-10-12 14:33:22,550 | INFO     | 
[2025-10-12 10:34:15] 2025-10-12 14:33:22,550 | INFO     | job summary report
[2025-10-12 10:34:15] 2025-10-12 14:33:22,550 | INFO     | --------------------------------------------------
[2025-10-12 10:34:15] 2025-10-12 14:33:22,550 | INFO     | PanDA job id: 6839385020
[2025-10-12 10:34:15] 2025-10-12 14:33:22,550 | INFO     | task id: 46676269
[2025-10-12 10:34:15] 2025-10-12 14:33:22,550 | INFO     | errors: (none)
[2025-10-12 10:34:15] 2025-10-12 14:33:22,550 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:34:15] 2025-10-12 14:33:22,550 | INFO     | pilot state: finished 
[2025-10-12 10:34:15] 2025-10-12 14:33:22,551 | INFO     | transexitcode: 0
[2025-10-12 10:34:15] 2025-10-12 14:33:22,551 | INFO     | exeerrorcode: 0
[2025-10-12 10:34:15] 2025-10-12 14:33:22,551 | INFO     | exeerrordiag: 
[2025-10-12 10:34:15] 2025-10-12 14:33:22,551 | INFO     | exitcode: 0
[2025-10-12 10:34:15] 2025-10-12 14:33:22,551 | INFO     | exitmsg: OK
[2025-10-12 10:34:15] 2025-10-12 14:33:22,551 | INFO     | cpuconsumptiontime: 41207 s
[2025-10-12 10:34:15] 2025-10-12 14:33:22,551 | INFO     | nevents: 400
[2025-10-12 10:34:15] 2025-10-12 14:33:22,551 | INFO     | neventsw: 0
[2025-10-12 10:34:15] 2025-10-12 14:33:22,551 | INFO     | pid: 3650463
[2025-10-12 10:34:15] 2025-10-12 14:33:22,551 | INFO     | pgrp: 3650463
[2025-10-12 10:34:15] 2025-10-12 14:33:22,551 | INFO     | corecount: 9
[2025-10-12 10:34:15] 2025-10-12 14:33:22,551 | INFO     | event service: False
[2025-10-12 10:34:15] 2025-10-12 14:33:22,551 | INFO     | sizes: {0: 2348636, 1: 2348835, 12: 2348835, 13: 2349125, 23: 2349181, 15053: 2380208, 15056: 2389206, 15057: 2389262, 15064: 2389456}
[2025-10-12 10:34:15] 2025-10-12 14:33:22,551 | INFO     | --------------------------------------------------
[2025-10-12 10:34:15] 2025-10-12 14:33:22,551 | INFO     | 
[2025-10-12 10:34:15] 2025-10-12 14:33:22,551 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 10:34:15] 2025-10-12 14:33:22,655 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,656 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,656 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,656 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,656 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,656 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,656 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,656 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,656 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,656 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,656 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,657 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,657 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,657 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,657 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,657 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,657 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,657 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:34:15] 2025-10-12 14:33:22,657 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,657 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:34:15] 2025-10-12 14:33:22,657 | INFO     | job 6839385020 has completed (purged errors)
[2025-10-12 10:34:15] 2025-10-12 14:33:22,657 | INFO     | overall cleanup function is called
[2025-10-12 10:34:15] 2025-10-12 14:33:23,690 | INFO     | --- collectZombieJob: --- 10, [3650463]
[2025-10-12 10:34:15] 2025-10-12 14:33:23,690 | INFO     | zombie collector waiting for pid 3650463
[2025-10-12 10:34:15] 2025-10-12 14:33:23,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:34:15] 2025-10-12 14:33:23,690 | INFO     | collected zombie processes
[2025-10-12 10:34:15] 2025-10-12 14:33:23,690 | INFO     | will attempt to kill all subprocesses of pid=3650463
[2025-10-12 10:34:15] 2025-10-12 14:33:24,181 | INFO     | process IDs to be killed: [3650463] (in reverse order)
[2025-10-12 10:34:15] 2025-10-12 14:33:24,306 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:34:15] 2025-10-12 14:33:24,307 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:34:15] 2025-10-12 14:33:24,346 | INFO     | did not find any defunct processes belonging to 3650463
[2025-10-12 10:34:15] 2025-10-12 14:33:24,366 | INFO     | did not find any defunct processes belonging to 3650463
[2025-10-12 10:34:15] 2025-10-12 14:33:24,366 | INFO     | ready for new job
[2025-10-12 10:34:15] 2025-10-12 14:33:24,366 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:34:15] 2025-10-12 14:33:24,369 | INFO     | ***************************************
[2025-10-12 10:34:15] 2025-10-12 14:33:24,369 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:34:15] 2025-10-12 14:33:24,369 | INFO     | ***************************************
[2025-10-12 10:34:15] 2025-10-12 14:33:24,369 | INFO     | 
[2025-10-12 10:34:15] 2025-10-12 14:33:24,380 | INFO     | architecture information:
[2025-10-12 10:34:15] 2025-10-12 14:33:24,380 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:34:15] 2025-10-12 14:33:24,402 | INFO     | cat /etc/os-release:
[2025-10-12 10:34:15] NAME="CentOS Linux"
[2025-10-12 10:34:15] VERSION="7 (Core)"
[2025-10-12 10:34:15] ID="centos"
[2025-10-12 10:34:15] ID_LIKE="rhel fedora"
[2025-10-12 10:34:15] VERSION_ID="7"
[2025-10-12 10:34:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:34:15] ANSI_COLOR="0;31"
[2025-10-12 10:34:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:34:15] HOME_URL="https://www.centos.org/"
[2025-10-12 10:34:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:34:15] 
[2025-10-12 10:34:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:34:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:34:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:34:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:34:15] 
[2025-10-12 10:34:15] 2025-10-12 14:33:24,403 | INFO     | ***************************************
[2025-10-12 10:34:15] 2025-10-12 14:33:24,911 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 10:34:15] 2025-10-12 14:33:24,927 | INFO     | sufficient remaining disk space (74551656448 B)
[2025-10-12 10:34:15] 2025-10-12 14:33:24,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:34:15] 2025-10-12 14:33:24,927 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:34:15] 2025-10-12 14:33:24,927 | INFO     | update_server=False
[2025-10-12 10:34:15] 2025-10-12 14:33:24,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:34:15] 2025-10-12 14:33:24,927 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:34:15] 2025-10-12 14:33:24,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:34:15] 2025-10-12 14:33:24,928 | INFO     | aborting loop
[2025-10-12 10:34:15] 2025-10-12 14:33:25,297 | INFO     | all data control threads have been joined
[2025-10-12 10:34:15] 2025-10-12 14:33:25,401 | INFO     | all payload control threads have been joined
[2025-10-12 10:34:15] 2025-10-12 14:33:25,462 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:34:15] 2025-10-12 14:33:25,601 | INFO     | all job control threads have been joined
[2025-10-12 10:34:15] 2025-10-12 14:33:25,933 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:34:15] 2025-10-12 14:33:25,939 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:34:15] 2025-10-12 14:33:26,113 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:34:15] 2025-10-12 14:33:26,303 | INFO     | [data] control thread has finished
[2025-10-12 10:34:15] 2025-10-12 14:33:26,354 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:34:15] 2025-10-12 14:33:26,407 | INFO     | [payload] control thread has finished
[2025-10-12 10:34:15] 2025-10-12 14:33:26,606 | INFO     | [job] control thread has finished
[2025-10-12 10:34:15] 2025-10-12 14:33:26,634 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:34:15] 2025-10-12 14:33:26,669 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:34:15] 2025-10-12 14:33:26,720 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:34:15] 2025-10-12 14:33:26,773 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:34:15] 2025-10-12 14:33:26,899 | INFO     | [job] validate thread has finished
[2025-10-12 10:34:15] 2025-10-12 14:33:26,934 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:34:15] 2025-10-12 14:33:26,983 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:34:15] 2025-10-12 14:33:27,571 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:34:15] 2025-10-12 14:33:28,576 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:34:15] 2025-10-12 14:33:29,481 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:34:15] 2025-10-12 14:33:54,553 | INFO     | PID=3641315 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 10:34:15] 2025-10-12 14:33:54,553 | INFO     | .. there are 22 such processes running
[2025-10-12 10:34:15] 2025-10-12 14:33:54,554 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:34:15] 2025-10-12 14:33:54,554 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:34:15] 2025-10-12 14:33:54,554 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:34:15] 2025-10-12 14:34:07,520 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:34:15] 2025-10-12 14:34:09,466 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140215060391744)>', '<ExcThread(monitor, started 140214408296192)>']
[2025-10-12 10:34:15] 2025-10-12 14:34:09,650 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:34:15] 2025-10-12 14:34:09,650 | INFO     | [monitor] control thread has ended
[2025-10-12 10:34:15] 2025-10-12 14:34:14,491 | INFO     | all workflow threads have been joined
[2025-10-12 10:34:15] 2025-10-12 14:34:14,491 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:34:15] 2025-10-12 14:34:14,492 | INFO     | traces error code: 0
[2025-10-12 10:34:15] 2025-10-12 14:34:14,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:34:15] 2025-10-12 14:34:14,713 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:34:15] 2025-10-12 14:34:14,721 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:34:15] 2025-10-12 14:34:14,728 [wrapper] pilotpid: 3641315
[2025-10-12 10:34:15] 2025-10-12 14:34:14,731 [wrapper] Pilot exit status: 0
[2025-10-12 10:34:15] 2025-10-12 14:34:14,773 [wrapper] pandaids: 6839385020
[2025-10-12 10:34:15] 2025-10-12 14:34:14,859 [wrapper] cleanup supervisor_pilot  141522 3641316
[2025-10-12 10:34:15] 2025-10-12 14:34:14,863 [wrapper] Test setup, not cleaning
[2025-10-12 10:34:15] 2025-10-12 14:34:14,871 [wrapper] apfmon messages muted
[2025-10-12 10:34:15] 2025-10-12 14:34:14,881 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:34:15] 2025-10-12 14:34:14,885 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:34:15]  *** Error codes and diagnostics ***
[2025-10-12 10:34:15]     "exeErrorCode": 0,
[2025-10-12 10:34:15]     "exeErrorDiag": "",
[2025-10-12 10:34:15]     "pilotErrorCode": 0,
[2025-10-12 10:34:15]     "pilotErrorDiag": "",
[2025-10-12 10:34:15]  *** Listing of results directory ***
[2025-10-12 10:34:15] total 412744
[2025-10-12 10:34:15] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 23:35 pilot3.tar.gz
[2025-10-12 10:34:15] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 23:55 queuedata.json
[2025-10-12 10:34:15] -rwx------. 1 boincer umatlas     36292 Oct 11 23:55 runpilot2-wrapper.sh
[2025-10-12 10:34:15] -rw-r--r--. 1 boincer umatlas       100 Oct 12 06:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:34:15] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 06:21 run_atlas
[2025-10-12 10:34:15] -rw-r--r--. 1 boincer umatlas       105 Oct 12 06:21 job.xml
[2025-10-12 10:34:15] -rw-r--r--. 2 boincer umatlas 221622744 Oct 12 06:21 EVNT.46676267._001405.pool.root.1
[2025-10-12 10:34:15] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 06:21 start_atlas.sh
[2025-10-12 10:34:15] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 06:21 shared
[2025-10-12 10:34:15] -rw-r--r--. 2 boincer umatlas    569686 Oct 12 06:21 input.tar.gz
[2025-10-12 10:34:15] -rw-r--r--. 1 boincer umatlas         0 Oct 12 06:21 boinc_lockfile
[2025-10-12 10:34:15] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 06:21 pandaJob.out
[2025-10-12 10:34:15] -rw-------. 1 boincer umatlas    975520 Oct 12 06:21 agis_schedconf.cvmfs.json
[2025-10-12 10:34:15] drwx------. 5 boincer umatlas      4096 Oct 12 06:21 pilot3
[2025-10-12 10:34:15] -rw-r--r--. 1 boincer umatlas      6843 Oct 12 10:30 init_data.xml
[2025-10-12 10:34:15] -rw-------. 1 boincer umatlas 192343001 Oct 12 10:32 HITS.46676269._070264.pool.root.1
[2025-10-12 10:34:15] -rw-r--r--. 1 boincer umatlas       531 Oct 12 10:32 boinc_task_state.xml
[2025-10-12 10:34:15] -rw-------. 1 boincer umatlas      1044 Oct 12 10:33 memory_monitor_summary.json
[2025-10-12 10:34:15] -rw-------. 1 boincer umatlas   1560580 Oct 12 10:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:34:15] -rw-------. 1 boincer umatlas    488322 Oct 12 10:33 log.46676269._070264.job.log.tgz.1
[2025-10-12 10:34:15] -rw-------. 1 boincer umatlas      7826 Oct 12 10:33 heartbeat.json
[2025-10-12 10:34:15] -rw-------. 1 boincer umatlas        95 Oct 12 10:33 pilot_heartbeat.json
[2025-10-12 10:34:15] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 10:34 boinc_mmap_file
[2025-10-12 10:34:15] -rw-r--r--. 1 boincer umatlas        28 Oct 12 10:34 wrapper_checkpoint.txt
[2025-10-12 10:34:15] -rw-------. 1 boincer umatlas      4824 Oct 12 10:34 pilotlog.txt
[2025-10-12 10:34:15] -rw-------. 1 boincer umatlas   1899283 Oct 12 10:34 log.46676269._070264.job.log.1
[2025-10-12 10:34:15] -rw-------. 1 boincer umatlas       357 Oct 12 10:34 output.list
[2025-10-12 10:34:15] -rw-r--r--. 1 boincer umatlas       620 Oct 12 10:34 runtime_log
[2025-10-12 10:34:15] -rw-------. 1 boincer umatlas   2406400 Oct 12 10:34 result.tar.gz
[2025-10-12 10:34:15] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 10:34 runtime_log.err
[2025-10-12 10:34:15] -rw-------. 1 boincer umatlas       656 Oct 12 10:34 AJ8MDmUM2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmO7SMDmHPSVDo.diag
[2025-10-12 10:34:15] -rw-r--r--. 1 boincer umatlas     21002 Oct 12 10:34 stderr.txt
[2025-10-12 10:34:15] HITS file was successfully produced:
[2025-10-12 10:34:15] -rw-------. 1 boincer umatlas 192343001 Oct 12 10:32 shared/HITS.pool.root.1
[2025-10-12 10:34:15]  *** Contents of shared directory: ***
[2025-10-12 10:34:15] total 407204
[2025-10-12 10:34:15] -rw-r--r--. 2 boincer umatlas 221622744 Oct 12 06:21 ATLAS.root_0
[2025-10-12 10:34:15] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 06:21 start_atlas.sh
[2025-10-12 10:34:15] -rw-r--r--. 2 boincer umatlas    569686 Oct 12 06:21 input.tar.gz
[2025-10-12 10:34:15] -rw-------. 1 boincer umatlas 192343001 Oct 12 10:32 HITS.pool.root.1
[2025-10-12 10:34:15] -rw-------. 1 boincer umatlas   2406400 Oct 12 10:34 result.tar.gz
10:34:16 (3637335): run_atlas exited; CPU time 41639.244814
10:34:16 (3637335): called boinc_finish(0)

</stderr_txt>
]]>

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