Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:06:50 (18287): wrapper (7.7.26015): starting
05:06:50 (18287): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 05:06:50] Arguments: --nthreads 8
[2025-10-12 05:06:50] Threads: 8
[2025-10-12 05:06:50] Checking for CVMFS
[2025-10-12 05:06:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:06:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:06:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:06:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:06:50] 2.11.2.0 2791 193840 78964 151613 1 59 12585105 20275201 1 130560 1 68255153 99.976 8637348 24230 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 05:06:50] CVMFS is ok
[2025-10-12 05:06:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:06:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:06:50] Further information can be found at the LHC@home message board.
[2025-10-12 05:06:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:06:50] Checking for apptainer binary...
[2025-10-12 05:06:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:06:50] Running /usr/bin/apptainer --version
[2025-10-12 05:06:50] apptainer version 1.3.2-1.el7
[2025-10-12 05:06:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:06:52] c-204-3.aglt2.org
[2025-10-12 05:06:52] apptainer works
[2025-10-12 05:06:52] Set ATHENA_PROC_NUMBER=8
[2025-10-12 05:06:52] Set ATHENA_CORE_NUMBER=8
[2025-10-12 05:06:52] Starting ATLAS job with PandaID=6839385226
[2025-10-12 05:06:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:16:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:16:28] 2025-10-12 11:15:24,655 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 07:16:28] 2025-10-12 11:15:24,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 07:16:28] 2025-10-12 11:15:24,656 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 07:16:28] 2025-10-12 11:15:24,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 07:16:28] 2025-10-12 11:15:24,658 | INFO     | fitting pss+swap vs Time
[2025-10-12 07:16:28] 2025-10-12 11:15:24,659 | INFO     | sum of square deviations: 620244187.5
[2025-10-12 07:16:28] 2025-10-12 11:15:24,659 | INFO     | sum of deviations: 6963778239.0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,660 | INFO     | mean x: 1760263874.5
[2025-10-12 07:16:28] 2025-10-12 11:15:24,660 | INFO     | mean y: 2448500.761904762
[2025-10-12 07:16:28] 2025-10-12 11:15:24,660 | INFO     | -- intersect: -19760876188.42098
[2025-10-12 07:16:28] 2025-10-12 11:15:24,660 | INFO     | intersect: -19760876188.42098
[2025-10-12 07:16:28] 2025-10-12 11:15:24,660 | INFO     | chi2: 2.2016007264505935
[2025-10-12 07:16:28] 2025-10-12 11:15:24,661 | INFO     | sum of square deviations: 549294020.0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,661 | INFO     | sum of deviations: 14939451439.999998
[2025-10-12 07:16:28] 2025-10-12 11:15:24,661 | INFO     | mean x: 1760263722.0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,661 | INFO     | mean y: 2465059.8925619833
[2025-10-12 07:16:28] 2025-10-12 11:15:24,661 | INFO     | -- intersect: -47872395104.091484
[2025-10-12 07:16:28] 2025-10-12 11:15:24,662 | INFO     | intersect: -47872395104.091484
[2025-10-12 07:16:28] 2025-10-12 11:15:24,662 | INFO     | chi2: 1.3976353607699386
[2025-10-12 07:16:28] 2025-10-12 11:15:24,662 | INFO     | current chi2=1.3976353607699386 (change=36.51731015626992 %)
[2025-10-12 07:16:28] 2025-10-12 11:15:24,662 | INFO     | sum of square deviations: 483971865.0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,663 | INFO     | sum of deviations: 14303504968.0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,663 | INFO     | mean x: 1760263569.5
[2025-10-12 07:16:28] 2025-10-12 11:15:24,663 | INFO     | mean y: 2463574.5172413792
[2025-10-12 07:16:28] 2025-10-12 11:15:24,663 | INFO     | -- intersect: -52021095091.09375
[2025-10-12 07:16:28] 2025-10-12 11:15:24,663 | INFO     | intersect: -52021095091.09375
[2025-10-12 07:16:28] 2025-10-12 11:15:24,663 | INFO     | chi2: 1.3998586592468647
[2025-10-12 07:16:28] 2025-10-12 11:15:24,664 | INFO     | current chi2=1.3998586592468647 (change=-0.15907571741039556 %)
[2025-10-12 07:16:28] 2025-10-12 11:15:24,664 | INFO     | right removable region: 115
[2025-10-12 07:16:28] 2025-10-12 11:15:24,664 | INFO     | sum of square deviations: 549294020.0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,665 | INFO     | sum of deviations: -10275392782.0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,665 | INFO     | mean x: 1760264027.0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,665 | INFO     | mean y: 2484812.785123967
[2025-10-12 07:16:28] 2025-10-12 11:15:24,665 | INFO     | -- intersect: 32930941374.992107
[2025-10-12 07:16:28] 2025-10-12 11:15:24,665 | INFO     | intersect: 32930941374.992107
[2025-10-12 07:16:28] 2025-10-12 11:15:24,665 | INFO     | chi2: 0.8684844762583763
[2025-10-12 07:16:28] 2025-10-12 11:15:24,665 | INFO     | current chi2=0.8684844762583763 (change=60.55213527938186 %)
[2025-10-12 07:16:28] 2025-10-12 11:15:24,666 | INFO     | sum of square deviations: 483971865.0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,666 | INFO     | sum of deviations: -6912136218.5
[2025-10-12 07:16:28] 2025-10-12 11:15:24,666 | INFO     | mean x: 1760264179.5
[2025-10-12 07:16:28] 2025-10-12 11:15:24,666 | INFO     | mean y: 2477023.1810344825
[2025-10-12 07:16:28] 2025-10-12 11:15:24,667 | INFO     | -- intersect: 25142752045.67668
[2025-10-12 07:16:28] 2025-10-12 11:15:24,667 | INFO     | intersect: 25142752045.67668
[2025-10-12 07:16:28] 2025-10-12 11:15:24,667 | INFO     | chi2: 0.8401360372185268
[2025-10-12 07:16:28] 2025-10-12 11:15:24,667 | INFO     | current chi2=0.8401360372185268 (change=3.2641273177363948 %)
[2025-10-12 07:16:28] 2025-10-12 11:15:24,667 | INFO     | left removable region: 20
[2025-10-12 07:16:28] 2025-10-12 11:15:24,667 | INFO     | sum of square deviations: 265828240.0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,668 | INFO     | sum of deviations: 337954945.0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,668 | INFO     | mean x: 1760264149.0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,668 | INFO     | mean y: 2497957.1157894735
[2025-10-12 07:16:28] 2025-10-12 11:15:24,668 | INFO     | -- intersect: -2235375542.181226
[2025-10-12 07:16:28] 2025-10-12 11:15:24,668 | INFO     | intersect: -2235375542.181226
[2025-10-12 07:16:28] 2025-10-12 11:15:24,669 | INFO     | chi2: 2.7490351072427283e-05
[2025-10-12 07:16:28] 2025-10-12 11:15:24,669 | INFO     | -- intersect: -2235375542.181226
[2025-10-12 07:16:28] 2025-10-12 11:15:24,669 | INFO     | current memory leak: 1.27 B/s (using 95 data points, chi2=0.00)
[2025-10-12 07:16:28] 2025-10-12 11:15:24,669 | INFO     | could have reported an average CPU frequency of 1974 MHz (8 samples)
[2025-10-12 07:16:28] 2025-10-12 11:15:24,669 | INFO     | ..............................
[2025-10-12 07:16:28] 2025-10-12 11:15:24,670 | INFO     | . Timing measurements:
[2025-10-12 07:16:28] 2025-10-12 11:15:24,670 | INFO     | . get job = 0 s
[2025-10-12 07:16:28] 2025-10-12 11:15:24,670 | INFO     | . initial setup = 2 s
[2025-10-12 07:16:28] 2025-10-12 11:15:24,670 | INFO     | . payload setup = 8 s
[2025-10-12 07:16:28] 2025-10-12 11:15:24,670 | INFO     | . stage-in = 0 s
[2025-10-12 07:16:28] 2025-10-12 11:15:24,670 | INFO     | . payload execution = 7654 s
[2025-10-12 07:16:28] 2025-10-12 11:15:24,670 | INFO     | . stage-out = 0 s
[2025-10-12 07:16:28] 2025-10-12 11:15:24,670 | INFO     | . log creation = 0 s
[2025-10-12 07:16:28] 2025-10-12 11:15:24,670 | INFO     | ..............................
[2025-10-12 07:16:28] 2025-10-12 11:15:24,761 | INFO     | 
[2025-10-12 07:16:28] 2025-10-12 11:15:24,761 | INFO     | job summary report
[2025-10-12 07:16:28] 2025-10-12 11:15:24,761 | INFO     | --------------------------------------------------
[2025-10-12 07:16:28] 2025-10-12 11:15:24,762 | INFO     | PanDA job id: 6839385226
[2025-10-12 07:16:28] 2025-10-12 11:15:24,762 | INFO     | task id: 46676269
[2025-10-12 07:16:28] 2025-10-12 11:15:24,762 | INFO     | errors: (none)
[2025-10-12 07:16:28] 2025-10-12 11:15:24,762 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:16:28] 2025-10-12 11:15:24,762 | INFO     | pilot state: finished 
[2025-10-12 07:16:28] 2025-10-12 11:15:24,762 | INFO     | transexitcode: 0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,763 | INFO     | exeerrorcode: 0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,763 | INFO     | exeerrordiag: 
[2025-10-12 07:16:28] 2025-10-12 11:15:24,763 | INFO     | exitcode: 0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,763 | INFO     | exitmsg: OK
[2025-10-12 07:16:28] 2025-10-12 11:15:24,763 | INFO     | cpuconsumptiontime: 56700 s
[2025-10-12 07:16:28] 2025-10-12 11:15:24,764 | INFO     | nevents: 400
[2025-10-12 07:16:28] 2025-10-12 11:15:24,764 | INFO     | neventsw: 0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,764 | INFO     | pid: 29458
[2025-10-12 07:16:28] 2025-10-12 11:15:24,764 | INFO     | pgrp: 29458
[2025-10-12 07:16:28] 2025-10-12 11:15:24,764 | INFO     | corecount: 8
[2025-10-12 07:16:28] 2025-10-12 11:15:24,764 | INFO     | event service: False
[2025-10-12 07:16:28] 2025-10-12 11:15:24,764 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 7666: 2376720, 7668: 2385718, 7671: 2385802, 7677: 2386124}
[2025-10-12 07:16:28] 2025-10-12 11:15:24,765 | INFO     | --------------------------------------------------
[2025-10-12 07:16:28] 2025-10-12 11:15:24,765 | INFO     | 
[2025-10-12 07:16:28] 2025-10-12 11:15:24,765 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 07:16:28] 2025-10-12 11:15:24,793 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,794 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,794 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,794 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,794 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,795 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,795 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,795 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,795 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,796 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,796 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,796 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,796 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,797 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,797 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,797 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,797 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,797 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:16:28] 2025-10-12 11:15:24,798 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,798 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:16:28] 2025-10-12 11:15:24,798 | INFO     | job 6839385226 has completed (purged errors)
[2025-10-12 07:16:28] 2025-10-12 11:15:24,799 | INFO     | overall cleanup function is called
[2025-10-12 07:16:28] 2025-10-12 11:15:25,804 | INFO     | --- collectZombieJob: --- 10, [29458]
[2025-10-12 07:16:28] 2025-10-12 11:15:25,804 | INFO     | zombie collector waiting for pid 29458
[2025-10-12 07:16:28] 2025-10-12 11:15:25,804 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:16:28] 2025-10-12 11:15:25,804 | INFO     | collected zombie processes
[2025-10-12 07:16:28] 2025-10-12 11:15:25,805 | INFO     | will attempt to kill all subprocesses of pid=29458
[2025-10-12 07:16:28] 2025-10-12 11:15:25,895 | INFO     | process IDs to be killed: [29458] (in reverse order)
[2025-10-12 07:16:28] 2025-10-12 11:15:25,952 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:16:28] 2025-10-12 11:15:25,953 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:16:28] 2025-10-12 11:15:25,957 | INFO     | did not find any defunct processes belonging to 29458
[2025-10-12 07:16:28] 2025-10-12 11:15:25,960 | INFO     | did not find any defunct processes belonging to 29458
[2025-10-12 07:16:28] 2025-10-12 11:15:25,961 | INFO     | ready for new job
[2025-10-12 07:16:28] 2025-10-12 11:15:25,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:16:28] 2025-10-12 11:15:25,963 | INFO     | ***************************************
[2025-10-12 07:16:28] 2025-10-12 11:15:25,963 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:16:28] 2025-10-12 11:15:25,963 | INFO     | ***************************************
[2025-10-12 07:16:28] 2025-10-12 11:15:25,964 | INFO     | 
[2025-10-12 07:16:28] 2025-10-12 11:15:25,964 | INFO     | architecture information:
[2025-10-12 07:16:28] 2025-10-12 11:15:25,965 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:16:28] 2025-10-12 11:15:25,985 | INFO     | cat /etc/os-release:
[2025-10-12 07:16:28] NAME="CentOS Linux"
[2025-10-12 07:16:28] VERSION="7 (Core)"
[2025-10-12 07:16:28] ID="centos"
[2025-10-12 07:16:28] ID_LIKE="rhel fedora"
[2025-10-12 07:16:28] VERSION_ID="7"
[2025-10-12 07:16:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:16:28] ANSI_COLOR="0;31"
[2025-10-12 07:16:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:16:28] HOME_URL="https://www.centos.org/"
[2025-10-12 07:16:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:16:28] 
[2025-10-12 07:16:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:16:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:16:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:16:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:16:28] 
[2025-10-12 07:16:28] 2025-10-12 11:15:25,985 | INFO     | ***************************************
[2025-10-12 07:16:28] 2025-10-12 11:15:26,488 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 07:16:28] 2025-10-12 11:15:26,509 | INFO     | sufficient remaining disk space (18578669568 B)
[2025-10-12 07:16:28] 2025-10-12 11:15:26,509 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:16:28] 2025-10-12 11:15:26,510 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:16:28] 2025-10-12 11:15:26,510 | INFO     | update_server=False
[2025-10-12 07:16:28] 2025-10-12 11:15:26,510 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:16:28] 2025-10-12 11:15:26,511 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:16:28] 2025-10-12 11:15:26,707 | INFO     | all job control threads have been joined
[2025-10-12 07:16:28] 2025-10-12 11:15:26,784 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:16:28] 2025-10-12 11:15:26,843 | INFO     | all data control threads have been joined
[2025-10-12 07:16:28] 2025-10-12 11:15:27,410 | INFO     | all payload control threads have been joined
[2025-10-12 07:16:28] 2025-10-12 11:15:27,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:16:28] 2025-10-12 11:15:27,476 | INFO     | aborting loop
[2025-10-12 07:16:28] 2025-10-12 11:15:27,515 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:16:28] 2025-10-12 11:15:27,515 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:16:28] 2025-10-12 11:15:27,713 | INFO     | [job] control thread has finished
[2025-10-12 07:16:28] 2025-10-12 11:15:27,767 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:16:28] 2025-10-12 11:15:27,849 | INFO     | [data] control thread has finished
[2025-10-12 07:16:28] 2025-10-12 11:15:28,086 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:16:28] 2025-10-12 11:15:28,269 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:16:28] 2025-10-12 11:15:28,277 | INFO     | [job] validate thread has finished
[2025-10-12 07:16:28] 2025-10-12 11:15:28,391 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:16:28] 2025-10-12 11:15:28,415 | INFO     | [payload] control thread has finished
[2025-10-12 07:16:28] 2025-10-12 11:15:28,476 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:16:28] 2025-10-12 11:15:28,481 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:16:28] 2025-10-12 11:15:28,659 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:16:28] 2025-10-12 11:15:28,695 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:16:28] 2025-10-12 11:15:28,787 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:16:28] 2025-10-12 11:15:29,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:16:28] 2025-10-12 11:15:33,100 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:16:28] 2025-10-12 11:15:57,356 | INFO     | PID=22015 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 07:16:28] 2025-10-12 11:15:57,356 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:16:28] 2025-10-12 11:15:57,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:16:28] 2025-10-12 11:15:57,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:16:28] 2025-10-12 11:16:22,333 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:16:28] 2025-10-12 11:16:23,438 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139858888832832)>', '<ExcThread(monitor, started 139858051835648)>']
[2025-10-12 07:16:28] 2025-10-12 11:16:23,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:16:28] 2025-10-12 11:16:23,481 | INFO     | [monitor] control thread has ended
[2025-10-12 07:16:28] 2025-10-12 11:16:28,447 | INFO     | all workflow threads have been joined
[2025-10-12 07:16:28] 2025-10-12 11:16:28,447 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:16:28] 2025-10-12 11:16:28,448 | INFO     | traces error code: 0
[2025-10-12 07:16:28] 2025-10-12 11:16:28,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:16:28] 2025-10-12 11:16:28,630 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:16:28] 2025-10-12 11:16:28,635 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:16:28] 2025-10-12 11:16:28,640 [wrapper] pilotpid: 22015
[2025-10-12 07:16:28] 2025-10-12 11:16:28,644 [wrapper] Pilot exit status: 0
[2025-10-12 07:16:28] 2025-10-12 11:16:28,662 [wrapper] pandaids: 6839385226
[2025-10-12 07:16:28] 2025-10-12 11:16:28,721 [wrapper] cleanup supervisor_pilot 22476 22016
[2025-10-12 07:16:28] 2025-10-12 11:16:28,726 [wrapper] Test setup, not cleaning
[2025-10-12 07:16:28] 2025-10-12 11:16:28,732 [wrapper] apfmon messages muted
[2025-10-12 07:16:28] 2025-10-12 11:16:28,737 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:16:28] 2025-10-12 11:16:28,741 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:16:28]  *** Error codes and diagnostics ***
[2025-10-12 07:16:28]     "exeErrorCode": 0,
[2025-10-12 07:16:28]     "exeErrorDiag": "",
[2025-10-12 07:16:28]     "pilotErrorCode": 0,
[2025-10-12 07:16:28]     "pilotErrorDiag": "",
[2025-10-12 07:16:28]  *** Listing of results directory ***
[2025-10-12 07:16:28] total 418060
[2025-10-12 07:16:28] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 00:04 pilot3.tar.gz
[2025-10-12 07:16:28] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 00:06 queuedata.json
[2025-10-12 07:16:28] -rwx------ 1 boincer umatlas     36292 Oct 12 00:07 runpilot2-wrapper.sh
[2025-10-12 07:16:28] -rw-r--r-- 1 boincer umatlas       100 Oct 12 05:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:16:28] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 05:06 run_atlas
[2025-10-12 07:16:28] -rw-r--r-- 1 boincer umatlas       105 Oct 12 05:06 job.xml
[2025-10-12 07:16:28] -rw-r--r-- 2 boincer umatlas 224495475 Oct 12 05:06 EVNT.46676267._003231.pool.root.1
[2025-10-12 07:16:28] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 05:06 start_atlas.sh
[2025-10-12 07:16:28] drwxrwx--x 2 boincer umatlas      4096 Oct 12 05:06 shared
[2025-10-12 07:16:28] -rw-r--r-- 2 boincer umatlas    569685 Oct 12 05:06 input.tar.gz
[2025-10-12 07:16:28] -rw-r--r-- 1 boincer umatlas         0 Oct 12 05:06 boinc_lockfile
[2025-10-12 07:16:28] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 05:06 pandaJob.out
[2025-10-12 07:16:28] -rw------- 1 boincer umatlas    975520 Oct 12 05:07 agis_schedconf.cvmfs.json
[2025-10-12 07:16:28] -rw------- 1 boincer umatlas   1560580 Oct 12 05:07 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:16:28] drwx------ 5 boincer umatlas      4096 Oct 12 05:07 pilot3
[2025-10-12 07:16:28] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 07:13 init_data.xml
[2025-10-12 07:16:28] -rw------- 1 boincer umatlas 196768673 Oct 12 07:14 HITS.46676269._070470.pool.root.1
[2025-10-12 07:16:28] -rw-r--r-- 1 boincer umatlas       529 Oct 12 07:14 boinc_task_state.xml
[2025-10-12 07:16:28] -rw------- 1 boincer umatlas        95 Oct 12 07:15 pilot_heartbeat.json
[2025-10-12 07:16:28] -rw------- 1 boincer umatlas      1051 Oct 12 07:15 memory_monitor_summary.json
[2025-10-12 07:16:28] -rw------- 1 boincer umatlas    376184 Oct 12 07:15 log.46676269._070470.job.log.tgz.1
[2025-10-12 07:16:28] -rw------- 1 boincer umatlas      7844 Oct 12 07:15 heartbeat.json
[2025-10-12 07:16:28] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 07:16 boinc_mmap_file
[2025-10-12 07:16:28] -rw-r--r-- 1 boincer umatlas        27 Oct 12 07:16 wrapper_checkpoint.txt
[2025-10-12 07:16:28] -rw------- 1 boincer umatlas      4746 Oct 12 07:16 pilotlog.txt
[2025-10-12 07:16:28] -rw------- 1 boincer umatlas   1084802 Oct 12 07:16 log.46676269._070470.job.log.1
[2025-10-12 07:16:28] -rw------- 1 boincer umatlas       357 Oct 12 07:16 output.list
[2025-10-12 07:16:28] -rw-r--r-- 1 boincer umatlas       620 Oct 12 07:16 runtime_log
[2025-10-12 07:16:28] -rw------- 1 boincer umatlas   1484800 Oct 12 07:16 result.tar.gz
[2025-10-12 07:16:28] -rw------- 1 boincer umatlas       658 Oct 12 07:16 yvCODmHY2R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtXiNDmLvwY4m.diag
[2025-10-12 07:16:28] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 07:16 runtime_log.err
[2025-10-12 07:16:28] -rw-r--r-- 1 boincer umatlas     20848 Oct 12 07:16 stderr.txt
[2025-10-12 07:16:28] HITS file was successfully produced:
[2025-10-12 07:16:28] -rw------- 1 boincer umatlas 196768673 Oct 12 07:14 shared/HITS.pool.root.1
[2025-10-12 07:16:28]  *** Contents of shared directory: ***
[2025-10-12 07:16:28] total 413428
[2025-10-12 07:16:28] -rw-r--r-- 2 boincer umatlas 224495475 Oct 12 05:06 ATLAS.root_0
[2025-10-12 07:16:28] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 05:06 start_atlas.sh
[2025-10-12 07:16:28] -rw-r--r-- 2 boincer umatlas    569685 Oct 12 05:06 input.tar.gz
[2025-10-12 07:16:28] -rw------- 1 boincer umatlas 196768673 Oct 12 07:14 HITS.pool.root.1
[2025-10-12 07:16:28] -rw------- 1 boincer umatlas   1484800 Oct 12 07:16 result.tar.gz
07:16:30 (18287): run_atlas exited; CPU time 56644.169947
07:16:30 (18287): called boinc_finish(0)

</stderr_txt>
]]>

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