Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 04:19:36 (13796): vboxwrapper version 26210
2025-10-13 04:19:36 (13796): BOINC client version: 8.0.2
2025-10-13 04:19:37 (13796): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-10-13 04:19:37 (13796): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 04:19:37 (13796): Create VM. (boinc_4a44e6588bf356a8, slot#0)
2025-10-13 04:19:38 (13796): Setting Memory Size for VM. (6000MB)
2025-10-13 04:19:38 (13796): Setting CPU Count for VM. (3)
2025-10-13 04:19:38 (13796): Setting Chipset Options for VM.
2025-10-13 04:19:39 (13796): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 04:19:39 (13796): Setting Boot Options for VM.
2025-10-13 04:19:40 (13796): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 04:19:40 (13796): Enabling VM Network Access.
2025-10-13 04:19:40 (13796): Disabling USB Support for VM.
2025-10-13 04:19:40 (13796): Disabling COM Port Support for VM.
2025-10-13 04:19:41 (13796): Disabling LPT Port Support for VM.
2025-10-13 04:19:41 (13796): Disabling Audio Support for VM.
2025-10-13 04:19:41 (13796): Disabling Clipboard Support for VM.
2025-10-13 04:19:41 (13796): Disabling Drag and Drop Support for VM.
2025-10-13 04:19:42 (13796): Adding storage controller(s) to VM.
2025-10-13 04:19:42 (13796): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 04:19:42 (13796): Adding VirtualBox Guest Additions to VM.
2025-10-13 04:19:43 (13796): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 04:19:43 (13796): forwarding host port 57294 to guest port 80
2025-10-13 04:19:43 (13796): Enabling remote desktop for VM.
2025-10-13 04:19:44 (13796): Enabling shared directory for VM.
2025-10-13 04:19:44 (13796): Starting VM using VBoxManage interface. (boinc_4a44e6588bf356a8, slot#0)
2025-10-13 04:19:49 (13796): Successfully started VM. (PID = '15884')
2025-10-13 04:19:49 (13796): Reporting VM Process ID to BOINC.
2025-10-13 04:19:49 (13796): Guest Log: BIOS: VirtualBox 7.1.6
2025-10-13 04:19:49 (13796): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 04:19:49 (13796): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 04:19:49 (13796): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 04:19:49 (13796): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 04:19:49 (13796): Detected: Web Application Enabled (http://localhost:57294)
2025-10-13 04:19:49 (13796): Detected: Remote Desktop Enabled (localhost:57296)
2025-10-13 04:19:49 (13796): Preference change detected
2025-10-13 04:19:49 (13796): Setting CPU throttle for VM. (100%)
2025-10-13 04:19:50 (13796): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 04:19:51 (13796): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 04:19:51 (13796): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 04:19:54 (13796): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 04:19:54 (13796): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 04:19:54 (13796): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 04:21:07 (13796): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 04:21:07 (13796): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-13 04:21:14 (13796): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 04:21:14 (13796): Guest Log: 00:00:00.000144 main     Log opened 2025-10-13T04:21:12.565161000Z
2025-10-13 04:21:14 (13796): Guest Log: 00:00:00.000247 main     OS Product: Linux
2025-10-13 04:21:14 (13796): Guest Log: 00:00:00.000281 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 04:21:14 (13796): Guest Log: 00:00:00.000308 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 04:21:14 (13796): Guest Log: 00:00:00.000334 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 04:21:14 (13796): Guest Log: 00:00:00.000335 main     Process ID: 1345
2025-10-13 04:21:14 (13796): Guest Log: 00:00:00.000335 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 04:21:14 (13796): Guest Log: 00:00:00.001217 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 04:21:14 (13796): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 04:21:14 (13796): Guest Log: [INFO] Mounting shared directory
2025-10-13 04:21:14 (13796): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 04:21:18 (13796): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 04:21:18 (13796): Guest Log: [INFO] Detected branch: prod
2025-10-13 04:21:18 (13796): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 04:21:18 (13796): Guest Log: Copying input files
2025-10-13 04:21:19 (13796): Guest Log: Copied input files into RunAtlas.
2025-10-13 04:21:19 (13796): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-10-13 04:21:24 (13796): Guest Log: 00:00:10.007721 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 200 735 372 000ns (GuestNow=1 760 322 071 832 856 000 ns GuestLast=1 760 329 272 568 228 000 ns fSetTimeLastLoop=true )
2025-10-13 04:21:26 (13796): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 04:21:26 (13796): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 04:21:26 (13796): Guest Log: 2.6.3.0 1620 0 29576 151645 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-10-13 04:21:26 (13796): Guest Log: copied the webapp to /var/www
2025-10-13 04:21:26 (13796): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-13 04:21:26 (13796): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-13 04:21:26 (13796): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 04:21:27 (13796): Guest Log:  *** Starting ATLAS job. (PandaID=6839386565 taskID=46676269) ***
2025-10-13 05:59:52 (13796): Status Report: Elapsed Time: '6000.000000'
2025-10-13 05:59:52 (13796): Status Report: CPU Time: '16644.312500'
2025-10-13 07:39:55 (13796): Status Report: Elapsed Time: '12000.000000'
2025-10-13 07:39:55 (13796): Status Report: CPU Time: '34455.390625'
2025-10-13 09:19:58 (13796): Status Report: Elapsed Time: '18000.000000'
2025-10-13 09:19:58 (13796): Status Report: CPU Time: '52268.125000'
2025-10-13 10:04:46 (13796): Guest Log:  *** Job finished ***
2025-10-13 10:04:46 (13796): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:00,899 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:00,899 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:20,338 | INFO     | [monitor] cgroup control has ended
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:22,255 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139911462496064)>', '<ExcThread(monitor, started 139911000729344)>']
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:23,053 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:23,053 | INFO     | [monitor] control thread has ended
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:27,283 | INFO     | all workflow threads have been joined
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:27,283 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:27,283 | INFO     | traces error code: 0
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:27,283 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:27,396 [wrapper] ==== pilot stdout END ====
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:27,401 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:27,406 [wrapper] pilotpid: 5985
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:27,411 [wrapper] Pilot exit status: 0
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:27,438 [wrapper] pandaids: 6839386565
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:27,477 [wrapper] cleanup supervisor_pilot 23943 5986
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:27,481 [wrapper] Test setup, not cleaning
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:27,486 [wrapper] apfmon messages muted
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:27,491 [wrapper] ==== wrapper stdout END ====
2025-10-13 10:04:46 (13796): Guest Log: 2025-10-13 08:04:27,496 [wrapper] ==== wrapper stderr END ====
2025-10-13 10:04:46 (13796): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 10:04:46 (13796): Guest Log:     "exeErrorCode": 0,
2025-10-13 10:04:46 (13796): Guest Log:     "exeErrorDiag": "",
2025-10-13 10:04:46 (13796): Guest Log:     "pilotErrorCode": 0,
2025-10-13 10:04:46 (13796): Guest Log:     "pilotErrorDiag": "",
2025-10-13 10:04:46 (13796): Guest Log:  *** Listing of results directory ***
2025-10-13 10:04:46 (13796): Guest Log: total 199332
2025-10-13 10:04:46 (13796): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 12 04:11 pilot3.tar.gz
2025-10-13 10:04:46 (13796): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 04:14 runpilot2-wrapper.sh
2025-10-13 10:04:46 (13796): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 04:14 queuedata.json
2025-10-13 10:04:46 (13796): Guest Log: -rwxr-xr-x. 1 atlas atlas      9023 Oct 13 02:21 init_data.xml
2025-10-13 10:04:46 (13796): Guest Log: -rwxr-xr-x. 1 atlas atlas    569676 Oct 13 02:21 input.tar.gz
2025-10-13 10:04:46 (13796): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 13 02:21 start_atlas.sh
2025-10-13 10:04:46 (13796): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 13 02:21 EVNT.46676267._003260.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 10:04:46 (13796): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 13 02:21 pandaJob.out
2025-10-13 10:04:46 (13796): Guest Log: -rw-------. 1 atlas atlas    974373 Oct 13 02:21 agis_schedconf.cvmfs.json
2025-10-13 10:04:46 (13796): Guest Log: drwx------. 5 atlas atlas      4096 Oct 13 02:21 pilot3
2025-10-13 10:04:46 (13796): Guest Log: -rw-------. 1 atlas atlas 193770354 Oct 13 08:02 HITS.46676269._070861.pool.root.1
2025-10-13 10:04:46 (13796): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 08:03 pilot_heartbeat.json
2025-10-13 10:04:46 (13796): Guest Log: -rw-------. 1 atlas atlas      1028 Oct 13 08:03 memory_monitor_summary.json
2025-10-13 10:04:46 (13796): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 08:03 agis_ddmendpoints.agis.ALL.json
2025-10-13 10:04:46 (13796): Guest Log: -rw-------. 1 atlas atlas    464944 Oct 13 08:03 log.46676269._070861.job.log.tgz.1
2025-10-13 10:04:46 (13796): Guest Log: -rw-------. 1 atlas atlas      7784 Oct 13 08:03 heartbeat.json
2025-10-13 10:04:46 (13796): Guest Log: -rw-------. 1 atlas atlas      4921 Oct 13 08:04 pilotlog.txt
2025-10-13 10:04:46 (13796): Guest Log: -rw-------. 1 atlas atlas   2791592 Oct 13 08:04 log.46676269._070861.job.log.1
2025-10-13 10:04:46 (13796): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 08:04 output.list
2025-10-13 10:04:46 (13796): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 08:04 runtime_log
2025-10-13 10:04:46 (13796): Guest Log: -rw-------. 1 atlas atlas   3276800 Oct 13 08:04 result.tar.gz
2025-10-13 10:04:46 (13796): Guest Log: -rw-------. 1 atlas atlas       657 Oct 13 08:04 ZfJODmJe2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmNBTMDmlQotDo.diag
2025-10-13 10:04:46 (13796): Guest Log: -rw-r--r--. 1 atlas atlas      8627 Oct 13 08:04 runtime_log.err
2025-10-13 10:04:46 (13796): Guest Log: Looking for outputfile HITS.46676269._070861.pool.root.1
2025-10-13 10:04:46 (13796): Guest Log: HITS file was successfully produced
2025-10-13 10:04:46 (13796): Guest Log: -rw-------. 1 atlas atlas 193770354 Oct 13 08:02 /home/atlas/RunAtlas/HITS.46676269._070861.pool.root.1
2025-10-13 10:04:46 (13796): Guest Log: Successfully finished the ATLAS job!
2025-10-13 10:04:46 (13796): Guest Log: Copying the results back to the shared directory!
2025-10-13 10:04:46 (13796): Guest Log:  *** Contents of shared directory: ***
2025-10-13 10:04:46 (13796): Guest Log: total 407944
2025-10-13 10:04:46 (13796): Guest Log: -rwxrwxrwx. 1 root root 220079863 Oct 13 02:19 ATLAS.root_0
2025-10-13 10:04:46 (13796): Guest Log: -rwxrwxrwx. 1 root root 193770354 Oct 13  2025 HITS.pool.root.1
2025-10-13 10:04:46 (13796): Guest Log: -rwxrwxrwx. 1 root root      9023 Oct 13 02:19 init_data.xml
2025-10-13 10:04:46 (13796): Guest Log: -rwxrwxrwx. 1 root root    569676 Oct 12 08:50 input.tar.gz
2025-10-13 10:04:46 (13796): Guest Log: -rwxrwxrwx. 1 root root   3276800 Oct 13  2025 result.tar.gz
2025-10-13 10:04:46 (13796): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 12 08:50 start_atlas.sh
2025-10-13 10:04:46 (13796): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 10:04:46 (13796): VM Completion File Detected.
2025-10-13 10:04:46 (13796): Powering off VM.
2025-10-13 10:04:47 (13796): Successfully stopped VM.
2025-10-13 10:04:47 (13796): Deregistering VM. (boinc_4a44e6588bf356a8, slot#0)
2025-10-13 10:04:47 (13796): Removing network bandwidth throttle group from VM.
2025-10-13 10:04:47 (13796): Removing VM from VirtualBox.
2025-10-13 10:04:52 (13796): called boinc_finish(0)

</stderr_txt>
]]>

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