Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:45:13 (2846573): wrapper (7.7.26015): starting
12:45:13 (2846573): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 12:45:13] Arguments: --nthreads 4
[2025-10-13 12:45:13] Threads: 4
[2025-10-13 12:45:13] Checking for CVMFS
[2025-10-13 12:45:13] No cvmfs_config command found, will try listing directly
[2025-10-13 12:45:13] CVMFS is ok
[2025-10-13 12:45:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 12:45:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 12:45:13] Further information can be found at the LHC@home message board.
[2025-10-13 12:45:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 12:45:13] Checking for apptainer binary...
[2025-10-13 12:45:13] which: no apptainer in ((null))
[2025-10-13 12:45:13] apptainer is not installed, using version from CVMFS
[2025-10-13 12:45:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 12:45:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-10-13 12:45:13] apptainer works
[2025-10-13 12:45:13] Set ATHENA_PROC_NUMBER=4
[2025-10-13 12:45:13] Set ATHENA_CORE_NUMBER=4
[2025-10-13 12:45:13] Starting ATLAS job with PandaID=6839591562
[2025-10-13 12:45:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 15:43:03]  *** The last 200 lines of the pilot log: ***
[2025-10-13 15:43:03] 2025-10-13 13:40:10,681 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 15:43:03] 2025-10-13 13:40:10,681 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 15:43:03] 2025-10-13 13:40:10,685 | INFO     | fitting pss+swap vs Time
[2025-10-13 15:43:03] 2025-10-13 13:40:10,685 | INFO     | sum of square deviations: 1577789583.0
[2025-10-13 15:43:03] 2025-10-13 13:40:10,686 | INFO     | sum of deviations: 8410084701.0
[2025-10-13 15:43:03] 2025-10-13 13:40:10,686 | INFO     | mean x: 1760357566.5
[2025-10-13 15:43:03] 2025-10-13 13:40:10,686 | INFO     | mean y: 2292851.906976744
[2025-10-13 15:43:03] 2025-10-13 13:40:10,687 | INFO     | -- intersect: -9380933148.458397
[2025-10-13 15:43:03] 2025-10-13 13:40:10,687 | INFO     | intersect: -9380933148.458397
[2025-10-13 15:43:03] 2025-10-13 13:40:10,687 | INFO     | chi2: 2.160756757516063
[2025-10-13 15:43:03] 2025-10-13 13:40:10,687 | INFO     | sum of square deviations: 1444149868.0
[2025-10-13 15:43:03] 2025-10-13 13:40:10,688 | INFO     | sum of deviations: 18465450361.0
[2025-10-13 15:43:03] 2025-10-13 13:40:10,688 | INFO     | mean x: 1760357414.0
[2025-10-13 15:43:03] 2025-10-13 13:40:10,689 | INFO     | mean y: 2304043.3113772455
[2025-10-13 15:43:03] 2025-10-13 13:40:10,689 | INFO     | -- intersect: -22506296460.078568
[2025-10-13 15:43:03] 2025-10-13 13:40:10,689 | INFO     | intersect: -22506296460.078568
[2025-10-13 15:43:03] 2025-10-13 13:40:10,689 | INFO     | chi2: 1.3932548594755239
[2025-10-13 15:43:03] 2025-10-13 13:40:10,689 | INFO     | current chi2=1.3932548594755239 (change=35.52005080492423 %)
[2025-10-13 15:43:03] 2025-10-13 13:40:10,689 | INFO     | sum of square deviations: 1318277740.5
[2025-10-13 15:43:03] 2025-10-13 13:40:10,690 | INFO     | sum of deviations: 17793992068.0
[2025-10-13 15:43:03] 2025-10-13 13:40:10,690 | INFO     | mean x: 1760357261.5
[2025-10-13 15:43:03] 2025-10-13 13:40:10,691 | INFO     | mean y: 2303229.407407407
[2025-10-13 15:43:03] 2025-10-13 13:40:10,691 | INFO     | -- intersect: -23758837678.650883
[2025-10-13 15:43:03] 2025-10-13 13:40:10,691 | INFO     | intersect: -23758837678.650883
[2025-10-13 15:43:03] 2025-10-13 13:40:10,691 | INFO     | chi2: 1.394527799459078
[2025-10-13 15:43:03] 2025-10-13 13:40:10,691 | INFO     | current chi2=1.394527799459078 (change=-0.09136447469727321 %)
[2025-10-13 15:43:03] 2025-10-13 13:40:10,691 | INFO     | right removable region: 161
[2025-10-13 15:43:03] 2025-10-13 13:40:10,692 | INFO     | sum of square deviations: 1444149868.0
[2025-10-13 15:43:03] 2025-10-13 13:40:10,692 | INFO     | sum of deviations: -14195581572.0
[2025-10-13 15:43:03] 2025-10-13 13:40:10,693 | INFO     | mean x: 1760357719.0
[2025-10-13 15:43:03] 2025-10-13 13:40:10,693 | INFO     | mean y: 2318279.0538922157
[2025-10-13 15:43:03] 2025-10-13 13:40:10,693 | INFO     | -- intersect: 17306132896.696026
[2025-10-13 15:43:03] 2025-10-13 13:40:10,693 | INFO     | intersect: 17306132896.696026
[2025-10-13 15:43:03] 2025-10-13 13:40:10,693 | INFO     | chi2: 0.8078595002472678
[2025-10-13 15:43:03] 2025-10-13 13:40:10,693 | INFO     | current chi2=0.8078595002472678 (change=62.612196054128866 %)
[2025-10-13 15:43:03] 2025-10-13 13:40:10,694 | INFO     | sum of square deviations: 1318277740.5
[2025-10-13 15:43:03] 2025-10-13 13:40:10,695 | INFO     | sum of deviations: -13475304399.5
[2025-10-13 15:43:03] 2025-10-13 13:40:10,695 | INFO     | mean x: 1760357871.5
[2025-10-13 15:43:03] 2025-10-13 13:40:10,695 | INFO     | mean y: 2317383.62345679
[2025-10-13 15:43:03] 2025-10-13 13:40:10,695 | INFO     | -- intersect: 17996521064.49673
[2025-10-13 15:43:03] 2025-10-13 13:40:10,695 | INFO     | intersect: 17996521064.49673
[2025-10-13 15:43:03] 2025-10-13 13:40:10,695 | INFO     | chi2: 0.8056250637441937
[2025-10-13 15:43:03] 2025-10-13 13:40:10,695 | INFO     | current chi2=0.8056250637441937 (change=0.2765872657795294 %)
[2025-10-13 15:43:03] 2025-10-13 13:40:10,695 | INFO     | left removable region: 20
[2025-10-13 15:43:03] 2025-10-13 13:40:10,696 | INFO     | sum of square deviations: 869188390.0
[2025-10-13 15:43:03] 2025-10-13 13:40:10,696 | INFO     | sum of deviations: -165940800.99999982
[2025-10-13 15:43:03] 2025-10-13 13:40:10,697 | INFO     | mean x: 1760357841.0
[2025-10-13 15:43:03] 2025-10-13 13:40:10,697 | INFO     | mean y: 2324988.3829787234
[2025-10-13 15:43:03] 2025-10-13 13:40:10,697 | INFO     | -- intersect: 338403097.04498047
[2025-10-13 15:43:03] 2025-10-13 13:40:10,697 | INFO     | intersect: 338403097.04498047
[2025-10-13 15:43:03] 2025-10-13 13:40:10,697 | INFO     | chi2: 0.005835959727916178
[2025-10-13 15:43:03] 2025-10-13 13:40:10,697 | INFO     | -- intersect: 338403097.04498047
[2025-10-13 15:43:03] 2025-10-13 13:40:10,697 | INFO     | current memory leak: -0.19 B/s (using 141 data points, chi2=0.01)
[2025-10-13 15:43:03] 2025-10-13 13:40:10,698 | INFO     | could have reported an average CPU frequency of 2642 MHz (9 samples)
[2025-10-13 15:43:03] 2025-10-13 13:40:10,698 | INFO     | ..............................
[2025-10-13 15:43:03] 2025-10-13 13:40:10,698 | INFO     | . Timing measurements:
[2025-10-13 15:43:03] 2025-10-13 13:40:10,698 | INFO     | . get job = 0 s
[2025-10-13 15:43:03] 2025-10-13 13:40:10,698 | INFO     | . initial setup = 1 s
[2025-10-13 15:43:03] 2025-10-13 13:40:10,698 | INFO     | . payload setup = 5 s
[2025-10-13 15:43:03] 2025-10-13 13:40:10,698 | INFO     | . stage-in = 0 s
[2025-10-13 15:43:03] 2025-10-13 13:40:10,699 | INFO     | . payload execution = 10452 s
[2025-10-13 15:43:03] 2025-10-13 13:40:10,699 | INFO     | . stage-out = 0 s
[2025-10-13 15:43:03] 2025-10-13 13:40:10,699 | INFO     | . log creation = 0 s
[2025-10-13 15:43:03] 2025-10-13 13:40:10,699 | INFO     | ..............................
[2025-10-13 15:43:03] 2025-10-13 13:40:10,904 | INFO     | 
[2025-10-13 15:43:03] 2025-10-13 13:40:10,905 | INFO     | job summary report
[2025-10-13 15:43:03] 2025-10-13 13:40:10,905 | INFO     | --------------------------------------------------
[2025-10-13 15:43:03] 2025-10-13 13:40:10,905 | INFO     | PanDA job id: 6839591562
[2025-10-13 15:43:03] 2025-10-13 13:40:10,905 | INFO     | task id: 46676269
[2025-10-13 15:43:03] 2025-10-13 13:40:10,905 | INFO     | errors: (none)
[2025-10-13 15:43:03] 2025-10-13 13:40:10,905 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 15:43:03] 2025-10-13 13:40:10,905 | INFO     | pilot state: finished 
[2025-10-13 15:43:03] 2025-10-13 13:40:10,905 | INFO     | transexitcode: 0
[2025-10-13 15:43:03] 2025-10-13 13:40:10,905 | INFO     | exeerrorcode: 0
[2025-10-13 15:43:03] 2025-10-13 13:40:10,905 | INFO     | exeerrordiag: 
[2025-10-13 15:43:03] 2025-10-13 13:40:10,905 | INFO     | exitcode: 0
[2025-10-13 15:43:03] 2025-10-13 13:40:10,905 | INFO     | exitmsg: OK
[2025-10-13 15:43:03] 2025-10-13 13:40:10,906 | INFO     | cpuconsumptiontime: 40270 s
[2025-10-13 15:43:03] 2025-10-13 13:40:10,906 | INFO     | nevents: 400
[2025-10-13 15:43:03] 2025-10-13 13:40:10,906 | INFO     | neventsw: 0
[2025-10-13 15:43:03] 2025-10-13 13:40:10,906 | INFO     | pid: 2880572
[2025-10-13 15:43:03] 2025-10-13 13:40:10,906 | INFO     | pgrp: 2880572
[2025-10-13 15:43:03] 2025-10-13 13:40:10,906 | INFO     | corecount: 4
[2025-10-13 15:43:03] 2025-10-13 13:40:10,906 | INFO     | event service: False
[2025-10-13 15:43:03] 2025-10-13 13:40:10,906 | INFO     | sizes: {0: 2348028, 1: 2348895, 6: 2349157, 12: 2349185, 10462: 2377991, 10464: 2387195, 10471: 2387397}
[2025-10-13 15:43:03] 2025-10-13 13:40:10,906 | INFO     | --------------------------------------------------
[2025-10-13 15:43:03] 2025-10-13 13:40:10,906 | INFO     | 
[2025-10-13 15:43:03] 2025-10-13 13:40:10,906 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-10-13 15:43:03] 2025-10-13 13:40:10,929 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,929 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,929 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,929 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,930 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,930 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,930 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,930 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,930 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,930 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,930 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,930 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,930 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,930 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,930 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,931 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,931 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,931 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 15:43:03] 2025-10-13 13:40:10,931 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,931 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 15:43:03] 2025-10-13 13:40:10,931 | INFO     | job 6839591562 has completed (purged errors)
[2025-10-13 15:43:03] 2025-10-13 13:40:10,931 | INFO     | overall cleanup function is called
[2025-10-13 15:43:03] 2025-10-13 13:40:11,936 | INFO     | --- collectZombieJob: --- 10, [2880572]
[2025-10-13 15:43:03] 2025-10-13 13:40:11,937 | INFO     | zombie collector waiting for pid 2880572
[2025-10-13 15:43:03] 2025-10-13 13:40:11,937 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 15:43:03] 2025-10-13 13:40:11,937 | INFO     | collected zombie processes
[2025-10-13 15:43:03] 2025-10-13 13:40:11,937 | INFO     | will attempt to kill all subprocesses of pid=2880572
[2025-10-13 15:43:03] 2025-10-13 13:40:12,301 | INFO     | process IDs to be killed: [2880572] (in reverse order)
[2025-10-13 15:43:03] 2025-10-13 13:40:12,411 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 15:43:03] 2025-10-13 13:40:12,412 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 15:43:03] 2025-10-13 13:40:12,424 | INFO     | did not find any defunct processes belonging to 2880572
[2025-10-13 15:43:03] 2025-10-13 13:40:12,435 | INFO     | did not find any defunct processes belonging to 2880572
[2025-10-13 15:43:03] 2025-10-13 13:40:12,435 | INFO     | ready for new job
[2025-10-13 15:43:03] 2025-10-13 13:40:12,435 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 15:43:03] 2025-10-13 13:40:12,438 | INFO     | ***************************************
[2025-10-13 15:43:03] 2025-10-13 13:40:12,438 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 15:43:03] 2025-10-13 13:40:12,438 | INFO     | ***************************************
[2025-10-13 15:43:03] 2025-10-13 13:40:12,438 | INFO     | 
[2025-10-13 15:43:03] 2025-10-13 13:40:12,442 | INFO     | architecture information:
[2025-10-13 15:43:03] 2025-10-13 13:40:12,442 | INFO     | executing command: cat /etc/os-release
[2025-10-13 15:43:03] 2025-10-13 13:40:12,458 | INFO     | cat /etc/os-release:
[2025-10-13 15:43:03] NAME="CentOS Linux"
[2025-10-13 15:43:03] VERSION="7 (Core)"
[2025-10-13 15:43:03] ID="centos"
[2025-10-13 15:43:03] ID_LIKE="rhel fedora"
[2025-10-13 15:43:03] VERSION_ID="7"
[2025-10-13 15:43:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 15:43:03] ANSI_COLOR="0;31"
[2025-10-13 15:43:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 15:43:03] HOME_URL="https://www.centos.org/"
[2025-10-13 15:43:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 15:43:03] 
[2025-10-13 15:43:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 15:43:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 15:43:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 15:43:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 15:43:03] 
[2025-10-13 15:43:03] 2025-10-13 13:40:12,458 | INFO     | ***************************************
[2025-10-13 15:43:03] 2025-10-13 13:40:12,961 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-10-13 15:43:03] 2025-10-13 13:40:12,980 | INFO     | sufficient remaining disk space (693590032384 B)
[2025-10-13 15:43:03] 2025-10-13 13:40:12,980 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 15:43:03] 2025-10-13 13:40:12,981 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 15:43:03] 2025-10-13 13:40:12,981 | INFO     | update_server=False
[2025-10-13 15:43:03] 2025-10-13 13:40:12,981 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 15:43:03] 2025-10-13 13:40:12,981 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:43:03] 2025-10-13 13:40:12,982 | INFO     | aborting loop
[2025-10-13 15:43:03] 2025-10-13 13:40:13,073 | INFO     | all job control threads have been joined
[2025-10-13 15:43:03] 2025-10-13 13:40:13,182 | INFO     | all payload control threads have been joined
[2025-10-13 15:43:03] 2025-10-13 13:40:13,429 | INFO     | all data control threads have been joined
[2025-10-13 15:43:03] 2025-10-13 13:40:13,986 | INFO     | [job] retrieve thread has finished
[2025-10-13 15:43:03] 2025-10-13 13:40:13,987 | INFO     | [job] job monitor thread has finished
[2025-10-13 15:43:03] 2025-10-13 13:40:13,990 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 15:43:03] 2025-10-13 13:40:14,079 | INFO     | [job] control thread has finished
[2025-10-13 15:43:03] 2025-10-13 13:40:14,151 | INFO     | [data] copytool_in thread has finished
[2025-10-13 15:43:03] 2025-10-13 13:40:14,188 | INFO     | [payload] control thread has finished
[2025-10-13 15:43:03] 2025-10-13 13:40:14,215 | INFO     | [payload] validate_post thread has finished
[2025-10-13 15:43:03] 2025-10-13 13:40:14,240 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 15:43:03] 2025-10-13 13:40:14,433 | INFO     | [data] control thread has finished
[2025-10-13 15:43:03] 2025-10-13 13:40:14,724 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 15:43:03] 2025-10-13 13:40:14,885 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 15:43:03] 2025-10-13 13:40:15,105 | INFO     | [job] validate thread has finished
[2025-10-13 15:43:03] 2025-10-13 13:40:15,123 | INFO     | [payload] failed_post thread has finished
[2025-10-13 15:43:03] 2025-10-13 13:40:15,378 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 15:43:03] 2025-10-13 13:40:15,808 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:43:03] 2025-10-13 13:40:16,246 | INFO     | [data] copytool_out thread has finished
[2025-10-13 15:43:03] 2025-10-13 13:40:16,813 | INFO     | [job] queue monitor thread has finished
[2025-10-13 15:43:03] 2025-10-13 13:40:18,727 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 15:43:03] 2025-10-13 13:40:23,256 | INFO     | job.realtimelogging is not enabled
[2025-10-13 15:43:03] 2025-10-13 13:40:24,260 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 15:43:03] 2025-10-13 13:40:40,922 | INFO     | [monitor] cgroup control has ended
[2025-10-13 15:43:03] 2025-10-13 13:40:42,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22810134976320)>', '<ExcThread(monitor, started 22809558370048)>']
[2025-10-13 15:43:03] 2025-10-13 13:40:42,798 | INFO     | PID=2855884 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 15:43:03] 2025-10-13 13:40:42,798 | INFO     | .. there are 6 such processes running
[2025-10-13 15:43:03] 2025-10-13 13:40:42,799 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 15:43:03] 2025-10-13 13:40:42,799 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 15:43:03] 2025-10-13 13:40:42,799 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 15:43:03] 2025-10-13 13:40:42,799 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 15:43:03] 2025-10-13 13:40:42,800 | INFO     | [monitor] control thread has ended
[2025-10-13 15:43:03] 2025-10-13 13:40:47,060 | INFO     | all workflow threads have been joined
[2025-10-13 15:43:03] 2025-10-13 13:40:47,060 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 15:43:03] 2025-10-13 13:40:47,060 | INFO     | traces error code: 0
[2025-10-13 15:43:03] 2025-10-13 13:40:47,060 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 15:43:03] 2025-10-13 13:40:47,207 [wrapper] ==== pilot stdout END ====
[2025-10-13 15:43:03] 2025-10-13 13:40:47,210 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 15:43:03] 2025-10-13 13:40:47,213 [wrapper] pilotpid: 2855884
[2025-10-13 15:43:03] 2025-10-13 13:40:47,217 [wrapper] Pilot exit status: 0
[2025-10-13 15:43:03] 2025-10-13 13:40:47,228 [wrapper] pandaids: 6839591562
[2025-10-13 15:43:03] 2025-10-13 13:40:47,300 [wrapper] cleanup supervisor_pilot 3145372 2855885
[2025-10-13 15:43:03] 2025-10-13 13:40:47,303 [wrapper] Test setup, not cleaning
[2025-10-13 15:43:03] 2025-10-13 13:40:47,306 [wrapper] apfmon messages muted
[2025-10-13 15:43:03] 2025-10-13 13:40:47,309 [wrapper] ==== wrapper stdout END ====
[2025-10-13 15:43:03] 2025-10-13 13:40:47,312 [wrapper] ==== wrapper stderr END ====
[2025-10-13 15:43:03]  *** Error codes and diagnostics ***
[2025-10-13 15:43:03]     "exeErrorCode": 0,
[2025-10-13 15:43:03]     "exeErrorDiag": "",
[2025-10-13 15:43:03]     "pilotErrorCode": 0,
[2025-10-13 15:43:03]     "pilotErrorDiag": "",
[2025-10-13 15:43:03]  *** Listing of results directory ***
[2025-10-13 15:43:03] total 409152
[2025-10-13 15:43:03] -rw-r--r-- 1 boinc boinc    557409 Oct 12 08:14 pilot3.tar.gz
[2025-10-13 15:43:03] -rw-r--r-- 1 boinc boinc      5112 Oct 12 08:38 queuedata.json
[2025-10-13 15:43:03] -rwx------ 1 boinc boinc     36292 Oct 12 08:38 runpilot2-wrapper.sh
[2025-10-13 15:43:03] -rw-r--r-- 1 boinc boinc       100 Oct 13 12:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 15:43:03] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 12:45 run_atlas
[2025-10-13 15:43:03] -rw-r--r-- 1 boinc boinc       105 Oct 13 12:45 job.xml
[2025-10-13 15:43:03] -rw-r--r-- 1 boinc boinc      6635 Oct 13 12:45 init_data.xml
[2025-10-13 15:43:03] -rw-r--r-- 2 boinc boinc 221011038 Oct 13 12:45 EVNT.46676267._004516.pool.root.1
[2025-10-13 15:43:03] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:45 start_atlas.sh
[2025-10-13 15:43:03] drwxrwx--x 2 boinc boinc      4096 Oct 13 12:45 shared
[2025-10-13 15:43:03] -rw-r--r-- 2 boinc boinc    569682 Oct 13 12:45 input.tar.gz
[2025-10-13 15:43:03] -rw-r--r-- 1 boinc boinc         0 Oct 13 12:45 boinc_lockfile
[2025-10-13 15:43:03] -rw-r--r-- 1 boinc boinc      2549 Oct 13 12:45 pandaJob.out
[2025-10-13 15:43:03] -rw------- 1 boinc boinc    972497 Oct 13 12:45 agis_schedconf.cvmfs.json
[2025-10-13 15:43:03] -rw------- 1 boinc boinc   1560580 Oct 13 12:45 agis_ddmendpoints.agis.ALL.json
[2025-10-13 15:43:03] drwx------ 5 boinc boinc      4096 Oct 13 12:45 pilot3
[2025-10-13 15:43:03] -rw------- 1 boinc boinc 190384576 Oct 13 15:39 HITS.46676269._072826.pool.root.1
[2025-10-13 15:43:03] -rw-r--r-- 1 boinc boinc       528 Oct 13 15:39 boinc_task_state.xml
[2025-10-13 15:43:03] -rw------- 1 boinc boinc      1035 Oct 13 15:39 memory_monitor_summary.json
[2025-10-13 15:43:03] -rw------- 1 boinc boinc    347043 Oct 13 15:40 log.46676269._072826.job.log.tgz.1
[2025-10-13 15:43:03] -rw------- 1 boinc boinc      7827 Oct 13 15:40 heartbeat.json
[2025-10-13 15:43:03] -rw------- 1 boinc boinc        95 Oct 13 15:40 pilot_heartbeat.json
[2025-10-13 15:43:03] -rw------- 1 boinc boinc      4905 Oct 13 15:40 pilotlog.txt
[2025-10-13 15:43:03] -rw------- 1 boinc boinc   1492410 Oct 13 15:40 log.46676269._072826.job.log.1
[2025-10-13 15:43:03] -rw------- 1 boinc boinc       357 Oct 13 15:40 output.list
[2025-10-13 15:43:03] -rw-r--r-- 1 boinc boinc       620 Oct 13 15:40 runtime_log
[2025-10-13 15:43:03] -rw------- 1 boinc boinc   1853440 Oct 13 15:40 result.tar.gz
[2025-10-13 15:43:03] -rw-r--r-- 1 boinc boinc      9070 Oct 13 15:40 runtime_log.err
[2025-10-13 15:43:03] -rw------- 1 boinc boinc       664 Oct 13 15:40 bv6NDmGu4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWtiNDmPbFurm.diag
[2025-10-13 15:43:03] -rw-r--r-- 1 boinc boinc        26 Oct 13 15:42 wrapper_checkpoint.txt
[2025-10-13 15:43:03] -rw-r--r-- 1 boinc boinc      8192 Oct 13 15:43 boinc_mmap_file
[2025-10-13 15:43:03] -rw-r--r-- 1 boinc boinc     20648 Oct 13 15:43 stderr.txt
[2025-10-13 15:43:03] HITS file was successfully produced:
[2025-10-13 15:43:03] -rw------- 1 boinc boinc 190384576 Oct 13 15:39 shared/HITS.pool.root.1
[2025-10-13 15:43:03]  *** Contents of shared directory: ***
[2025-10-13 15:43:03] total 404152
[2025-10-13 15:43:03] -rw-r--r-- 2 boinc boinc 221011038 Oct 13 12:45 ATLAS.root_0
[2025-10-13 15:43:03] -rw-r--r-- 2 boinc boinc     15120 Oct 13 12:45 start_atlas.sh
[2025-10-13 15:43:03] -rw-r--r-- 2 boinc boinc    569682 Oct 13 12:45 input.tar.gz
[2025-10-13 15:43:03] -rw------- 1 boinc boinc 190384576 Oct 13 15:39 HITS.pool.root.1
[2025-10-13 15:43:03] -rw------- 1 boinc boinc   1853440 Oct 13 15:40 result.tar.gz
15:43:05 (2846573): run_atlas exited; CPU time 40709.083959
15:43:05 (2846573): called boinc_finish(0)

</stderr_txt>
]]>

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