Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:47:47 (996425): wrapper (7.7.26015): starting
05:47:47 (996425): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 05:47:47] Arguments: --nthreads 8
[2025-10-12 05:47:47] Threads: 8
[2025-10-12 05:47:47] Checking for CVMFS
[2025-10-12 05:47:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:47:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:47:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:47:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:47:49] 2.13.2.0 5270 5519 112120 151615 2 566 38056792 40960000 19663 16776704 0 16358172 99.814 6304261 29173 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 05:47:49] CVMFS is ok
[2025-10-12 05:47:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:47:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:47:49] Further information can be found at the LHC@home message board.
[2025-10-12 05:47:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:47:49] Checking for apptainer binary...
[2025-10-12 05:47:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:47:49] Running /usr/bin/apptainer --version
[2025-10-12 05:47:49] apptainer version 1.4.3-1.el9
[2025-10-12 05:47:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:47:49] c-212-8.aglt2.org
[2025-10-12 05:47:49] apptainer works
[2025-10-12 05:47:49] Set ATHENA_PROC_NUMBER=8
[2025-10-12 05:47:49] Set ATHENA_CORE_NUMBER=8
[2025-10-12 05:47:49] Starting ATLAS job with PandaID=6839164281
[2025-10-12 05:47:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:28:37]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:28:37] 2025-10-12 12:27:51,634 | INFO     | right removable region: 150
[2025-10-12 08:28:37] 2025-10-12 12:27:51,634 | INFO     | sum of square deviations: 1067465020.1721852
[2025-10-12 08:28:37] 2025-10-12 12:27:51,635 | INFO     | sum of deviations: -2455962396.0596037
[2025-10-12 08:28:37] 2025-10-12 12:27:51,635 | INFO     | mean x: 1760267422.178808
[2025-10-12 08:28:37] 2025-10-12 12:27:51,635 | INFO     | mean y: 2517932.668874172
[2025-10-12 08:28:37] 2025-10-12 12:27:51,635 | INFO     | -- intersect: 4052440425.850516
[2025-10-12 08:28:37] 2025-10-12 12:27:51,635 | INFO     | intersect: 4052440425.850516
[2025-10-12 08:28:37] 2025-10-12 12:27:51,636 | INFO     | chi2: 0.050129702910998684
[2025-10-12 08:28:37] 2025-10-12 12:27:51,636 | INFO     | current chi2=0.050129702910998684 (change=96.75254666798611 %)
[2025-10-12 08:28:37] 2025-10-12 12:27:51,636 | INFO     | sum of square deviations: 964878117.5068501
[2025-10-12 08:28:37] 2025-10-12 12:27:51,656 | INFO     | sum of deviations: -1024055306.6027402
[2025-10-12 08:28:37] 2025-10-12 12:27:51,656 | INFO     | mean x: 1760267574.6849315
[2025-10-12 08:28:37] 2025-10-12 12:27:51,656 | INFO     | mean y: 2515745.2260273974
[2025-10-12 08:28:37] 2025-10-12 12:27:51,656 | INFO     | -- intersect: 1870742745.2896307
[2025-10-12 08:28:37] 2025-10-12 12:27:51,656 | INFO     | intersect: 1870742745.2896307
[2025-10-12 08:28:37] 2025-10-12 12:27:51,656 | INFO     | chi2: 0.03704408833830267
[2025-10-12 08:28:37] 2025-10-12 12:27:51,656 | INFO     | current chi2=0.03704408833830267 (change=26.103515107457316 %)
[2025-10-12 08:28:37] 2025-10-12 12:27:51,657 | INFO     | sum of square deviations: 869082039.829789
[2025-10-12 08:28:37] 2025-10-12 12:27:51,657 | INFO     | sum of deviations: 2322179757.957446
[2025-10-12 08:28:37] 2025-10-12 12:27:51,657 | INFO     | mean x: 1760267727.1914895
[2025-10-12 08:28:37] 2025-10-12 12:27:51,657 | INFO     | mean y: 2510413.2978723403
[2025-10-12 08:28:37] 2025-10-12 12:27:51,658 | INFO     | -- intersect: -4700909859.281239
[2025-10-12 08:28:37] 2025-10-12 12:27:51,658 | INFO     | intersect: -4700909859.281239
[2025-10-12 08:28:37] 2025-10-12 12:27:51,658 | INFO     | chi2: 0.01807362766602344
[2025-10-12 08:28:37] 2025-10-12 12:27:51,658 | INFO     | current chi2=0.01807362766602344 (change=51.21049409836399 %)
[2025-10-12 08:28:37] 2025-10-12 12:27:51,658 | INFO     | sum of square deviations: 779844224.6397029
[2025-10-12 08:28:37] 2025-10-12 12:27:51,659 | INFO     | sum of deviations: 3976999579.2132354
[2025-10-12 08:28:37] 2025-10-12 12:27:51,659 | INFO     | mean x: 1760267879.6985295
[2025-10-12 08:28:37] 2025-10-12 12:27:51,659 | INFO     | mean y: 2507649.5661764704
[2025-10-12 08:28:37] 2025-10-12 12:27:51,659 | INFO     | -- intersect: -8974393628.503782
[2025-10-12 08:28:37] 2025-10-12 12:27:51,659 | INFO     | intersect: -8974393628.503782
[2025-10-12 08:28:37] 2025-10-12 12:27:51,659 | INFO     | chi2: 0.0027121108879270142
[2025-10-12 08:28:37] 2025-10-12 12:27:51,659 | INFO     | current chi2=0.0027121108879270142 (change=84.9940978200768 %)
[2025-10-12 08:28:37] 2025-10-12 12:27:51,660 | INFO     | sum of square deviations: 696940160.8396965
[2025-10-12 08:28:37] 2025-10-12 12:27:51,660 | INFO     | sum of deviations: 3072674989.053435
[2025-10-12 08:28:37] 2025-10-12 12:27:51,660 | INFO     | mean x: 1760268032.1984732
[2025-10-12 08:28:37] 2025-10-12 12:27:51,660 | INFO     | mean y: 2509313.2671755725
[2025-10-12 08:28:37] 2025-10-12 12:27:51,660 | INFO     | -- intersect: -7758173540.838888
[2025-10-12 08:28:37] 2025-10-12 12:27:51,661 | INFO     | intersect: -7758173540.838888
[2025-10-12 08:28:37] 2025-10-12 12:27:51,661 | INFO     | chi2: 0.0022081643610137743
[2025-10-12 08:28:37] 2025-10-12 12:27:51,661 | INFO     | current chi2=0.0022081643610137743 (change=18.581339323423773 %)
[2025-10-12 08:28:37] 2025-10-12 12:27:51,661 | INFO     | left removable region: 50
[2025-10-12 08:28:37] 2025-10-12 12:27:51,661 | INFO     | sum of square deviations: 310022325.5600001
[2025-10-12 08:28:37] 2025-10-12 12:27:51,662 | INFO     | sum of deviations: 314257923.4000001
[2025-10-12 08:28:37] 2025-10-12 12:27:51,662 | INFO     | mean x: 1760268611.62
[2025-10-12 08:28:37] 2025-10-12 12:27:51,662 | INFO     | mean y: 2515735.8
[2025-10-12 08:28:37] 2025-10-12 12:27:51,662 | INFO     | -- intersect: -1781802079.101505
[2025-10-12 08:28:37] 2025-10-12 12:27:51,662 | INFO     | intersect: -1781802079.101505
[2025-10-12 08:28:37] 2025-10-12 12:27:51,662 | INFO     | chi2: 0.00018937906267584766
[2025-10-12 08:28:37] 2025-10-12 12:27:51,662 | INFO     | -- intersect: -1781802079.101505
[2025-10-12 08:28:37] 2025-10-12 12:27:51,662 | INFO     | current memory leak: 1.01 B/s (using 100 data points, chi2=0.00)
[2025-10-12 08:28:37] 2025-10-12 12:27:51,663 | INFO     | could have reported an average CPU frequency of 2964 MHz (9 samples)
[2025-10-12 08:28:37] 2025-10-12 12:27:51,663 | INFO     | ..............................
[2025-10-12 08:28:37] 2025-10-12 12:27:51,663 | INFO     | . Timing measurements:
[2025-10-12 08:28:37] 2025-10-12 12:27:51,663 | INFO     | . get job = 0 s
[2025-10-12 08:28:37] 2025-10-12 12:27:51,663 | INFO     | . initial setup = 3 s
[2025-10-12 08:28:37] 2025-10-12 12:27:51,663 | INFO     | . payload setup = 14 s
[2025-10-12 08:28:37] 2025-10-12 12:27:51,663 | INFO     | . stage-in = 0 s
[2025-10-12 08:28:37] 2025-10-12 12:27:51,663 | INFO     | . payload execution = 9521 s
[2025-10-12 08:28:37] 2025-10-12 12:27:51,663 | INFO     | . stage-out = 1 s
[2025-10-12 08:28:37] 2025-10-12 12:27:51,664 | INFO     | . log creation = 0 s
[2025-10-12 08:28:37] 2025-10-12 12:27:51,664 | INFO     | ..............................
[2025-10-12 08:28:37] 2025-10-12 12:27:51,783 | INFO     | 
[2025-10-12 08:28:37] 2025-10-12 12:27:51,783 | INFO     | job summary report
[2025-10-12 08:28:37] 2025-10-12 12:27:51,783 | INFO     | --------------------------------------------------
[2025-10-12 08:28:37] 2025-10-12 12:27:51,783 | INFO     | PanDA job id: 6839164281
[2025-10-12 08:28:37] 2025-10-12 12:27:51,783 | INFO     | task id: 46676269
[2025-10-12 08:28:37] 2025-10-12 12:27:51,784 | INFO     | errors: (none)
[2025-10-12 08:28:37] 2025-10-12 12:27:51,784 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:28:37] 2025-10-12 12:27:51,784 | INFO     | pilot state: finished 
[2025-10-12 08:28:37] 2025-10-12 12:27:51,784 | INFO     | transexitcode: 0
[2025-10-12 08:28:37] 2025-10-12 12:27:51,784 | INFO     | exeerrorcode: 0
[2025-10-12 08:28:37] 2025-10-12 12:27:51,784 | INFO     | exeerrordiag: 
[2025-10-12 08:28:37] 2025-10-12 12:27:51,784 | INFO     | exitcode: 0
[2025-10-12 08:28:37] 2025-10-12 12:27:51,784 | INFO     | exitmsg: OK
[2025-10-12 08:28:37] 2025-10-12 12:27:51,784 | INFO     | cpuconsumptiontime: 37281 s
[2025-10-12 08:28:37] 2025-10-12 12:27:51,784 | INFO     | nevents: 400
[2025-10-12 08:28:37] 2025-10-12 12:27:51,784 | INFO     | neventsw: 0
[2025-10-12 08:28:37] 2025-10-12 12:27:51,784 | INFO     | pid: 1015116
[2025-10-12 08:28:37] 2025-10-12 12:27:51,784 | INFO     | pgrp: 1015116
[2025-10-12 08:28:37] 2025-10-12 12:27:51,784 | INFO     | corecount: 8
[2025-10-12 08:28:37] 2025-10-12 12:27:51,784 | INFO     | event service: False
[2025-10-12 08:28:37] 2025-10-12 12:27:51,784 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 11: 2349175, 12: 2349203, 9540: 2377635, 9541: 2377762, 9543: 2386816, 9546: 2386872, 9555: 2387130}
[2025-10-12 08:28:37] 2025-10-12 12:27:51,785 | INFO     | --------------------------------------------------
[2025-10-12 08:28:37] 2025-10-12 12:27:51,785 | INFO     | 
[2025-10-12 08:28:37] 2025-10-12 12:27:51,785 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 08:28:37] 2025-10-12 12:27:51,811 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,811 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,811 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,811 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,812 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,812 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,812 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,812 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,812 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,812 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,812 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,812 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,812 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,812 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,813 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,813 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:28:37] 2025-10-12 12:27:51,813 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,813 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:28:37] 2025-10-12 12:27:51,813 | INFO     | job 6839164281 has completed (purged errors)
[2025-10-12 08:28:37] 2025-10-12 12:27:51,813 | INFO     | overall cleanup function is called
[2025-10-12 08:28:37] 2025-10-12 12:27:52,828 | INFO     | --- collectZombieJob: --- 10, [1015116]
[2025-10-12 08:28:37] 2025-10-12 12:27:52,829 | INFO     | zombie collector waiting for pid 1015116
[2025-10-12 08:28:37] 2025-10-12 12:27:52,829 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:28:37] 2025-10-12 12:27:52,829 | INFO     | collected zombie processes
[2025-10-12 08:28:37] 2025-10-12 12:27:52,829 | INFO     | will attempt to kill all subprocesses of pid=1015116
[2025-10-12 08:28:37] 2025-10-12 12:27:53,677 | INFO     | process IDs to be killed: [1015116] (in reverse order)
[2025-10-12 08:28:37] 2025-10-12 12:27:53,813 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:28:37] 2025-10-12 12:27:53,814 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:28:37] 2025-10-12 12:27:53,838 | INFO     | did not find any defunct processes belonging to 1015116
[2025-10-12 08:28:37] 2025-10-12 12:27:53,854 | INFO     | did not find any defunct processes belonging to 1015116
[2025-10-12 08:28:37] 2025-10-12 12:27:53,855 | INFO     | ready for new job
[2025-10-12 08:28:37] 2025-10-12 12:27:53,855 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:28:37] 2025-10-12 12:27:53,861 | INFO     | ***************************************
[2025-10-12 08:28:37] 2025-10-12 12:27:53,861 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:28:37] 2025-10-12 12:27:53,861 | INFO     | ***************************************
[2025-10-12 08:28:37] 2025-10-12 12:27:53,861 | INFO     | 
[2025-10-12 08:28:37] 2025-10-12 12:27:53,875 | INFO     | architecture information:
[2025-10-12 08:28:37] 2025-10-12 12:27:53,876 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:28:37] 2025-10-12 12:27:53,999 | INFO     | cat /etc/os-release:
[2025-10-12 08:28:37] NAME="CentOS Linux"
[2025-10-12 08:28:37] VERSION="7 (Core)"
[2025-10-12 08:28:37] ID="centos"
[2025-10-12 08:28:37] ID_LIKE="rhel fedora"
[2025-10-12 08:28:37] VERSION_ID="7"
[2025-10-12 08:28:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:28:37] ANSI_COLOR="0;31"
[2025-10-12 08:28:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:28:37] HOME_URL="https://www.centos.org/"
[2025-10-12 08:28:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:28:37] 
[2025-10-12 08:28:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:28:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:28:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:28:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:28:37] 
[2025-10-12 08:28:37] 2025-10-12 12:27:53,999 | INFO     | ***************************************
[2025-10-12 08:28:37] 2025-10-12 12:27:54,502 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 08:28:37] 2025-10-12 12:27:54,546 | INFO     | sufficient remaining disk space (126962630656 B)
[2025-10-12 08:28:37] 2025-10-12 12:27:54,546 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:28:37] 2025-10-12 12:27:54,546 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:28:37] 2025-10-12 12:27:54,547 | INFO     | update_server=False
[2025-10-12 08:28:37] 2025-10-12 12:27:54,547 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:28:37] 2025-10-12 12:27:54,858 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 08:28:37] 2025-10-12 12:27:54,859 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 08:28:37] 2025-10-12 12:27:54,859 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:28:37] 2025-10-12 12:27:54,859 | INFO     | will abort loop
[2025-10-12 08:28:37] 2025-10-12 12:27:54,864 | INFO     | all data control threads have been joined
[2025-10-12 08:28:37] 2025-10-12 12:27:54,958 | INFO     | all payload control threads have been joined
[2025-10-12 08:28:37] 2025-10-12 12:27:55,240 | INFO     | all job control threads have been joined
[2025-10-12 08:28:37] 2025-10-12 12:27:55,549 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:28:37] 2025-10-12 12:27:55,807 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:28:37] 2025-10-12 12:27:55,863 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:28:37] 2025-10-12 12:27:55,872 | INFO     | [data] control thread has finished
[2025-10-12 08:28:37] 2025-10-12 12:27:55,964 | INFO     | [payload] control thread has finished
[2025-10-12 08:28:37] 2025-10-12 12:27:56,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:28:37] 2025-10-12 12:27:56,247 | INFO     | [job] control thread has finished
[2025-10-12 08:28:37] 2025-10-12 12:27:56,384 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:28:37] 2025-10-12 12:27:56,418 | INFO     | [job] validate thread has finished
[2025-10-12 08:28:37] 2025-10-12 12:27:56,419 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:28:37] 2025-10-12 12:27:56,540 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:28:37] 2025-10-12 12:27:56,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:28:37] 2025-10-12 12:27:56,855 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:28:37] 2025-10-12 12:27:56,856 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:28:37] 2025-10-12 12:27:57,827 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:28:37] 2025-10-12 12:27:57,981 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:28:37] 2025-10-12 12:27:58,079 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:28:37] 2025-10-12 12:28:01,993 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:28:37] 2025-10-12 12:28:05,015 | INFO     | job.realtimelogging is not enabled
[2025-10-12 08:28:37] 2025-10-12 12:28:06,024 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:28:37] 2025-10-12 12:28:24,822 | INFO     | PID=1002971 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 08:28:37] 2025-10-12 12:28:24,822 | INFO     | .. there are 17 such processes running
[2025-10-12 08:28:37] 2025-10-12 12:28:24,823 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:28:37] 2025-10-12 12:28:24,823 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:28:37] 2025-10-12 12:28:24,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:28:37] 2025-10-12 12:28:31,111 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:28:37] 2025-10-12 12:28:32,321 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139700616537920)>', '<ExcThread(monitor, started 139700343904000)>']
[2025-10-12 08:28:37] 2025-10-12 12:28:32,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:28:37] 2025-10-12 12:28:32,873 | INFO     | [monitor] control thread has ended
[2025-10-12 08:28:37] 2025-10-12 12:28:37,356 | INFO     | all workflow threads have been joined
[2025-10-12 08:28:37] 2025-10-12 12:28:37,357 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:28:37] 2025-10-12 12:28:37,357 | INFO     | traces error code: 0
[2025-10-12 08:28:37] 2025-10-12 12:28:37,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:28:37] 2025-10-12 12:28:37,597 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:28:37] 2025-10-12 12:28:37,601 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:28:37] 2025-10-12 12:28:37,605 [wrapper] pilotpid: 1002971
[2025-10-12 08:28:37] 2025-10-12 12:28:37,609 [wrapper] Pilot exit status: 0
[2025-10-12 08:28:37] 2025-10-12 12:28:37,626 [wrapper] pandaids: 6839164281
[2025-10-12 08:28:37] 2025-10-12 12:28:37,720 [wrapper] cleanup supervisor_pilot 1389515 1002972
[2025-10-12 08:28:37] 2025-10-12 12:28:37,726 [wrapper] Test setup, not cleaning
[2025-10-12 08:28:37] 2025-10-12 12:28:37,730 [wrapper] apfmon messages muted
[2025-10-12 08:28:37] 2025-10-12 12:28:37,733 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:28:37] 2025-10-12 12:28:37,739 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:28:37]  *** Error codes and diagnostics ***
[2025-10-12 08:28:37]     "exeErrorCode": 0,
[2025-10-12 08:28:37]     "exeErrorDiag": "",
[2025-10-12 08:28:37]     "pilotErrorCode": 0,
[2025-10-12 08:28:37]     "pilotErrorDiag": "",
[2025-10-12 08:28:37]  *** Listing of results directory ***
[2025-10-12 08:28:37] total 407180
[2025-10-12 08:28:37] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 20:05 pilot3.tar.gz
[2025-10-12 08:28:37] -rwx------. 1 boincer umatlas     36292 Oct 11 20:38 runpilot2-wrapper.sh
[2025-10-12 08:28:37] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 20:38 queuedata.json
[2025-10-12 08:28:37] -rw-r--r--. 1 boincer umatlas       100 Oct 12 05:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:28:37] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 05:47 run_atlas
[2025-10-12 08:28:37] -rw-r--r--. 1 boincer umatlas       105 Oct 12 05:47 job.xml
[2025-10-12 08:28:37] -rw-r--r--. 2 boincer umatlas 218952513 Oct 12 05:47 EVNT.46676267._003102.pool.root.1
[2025-10-12 08:28:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 05:47 start_atlas.sh
[2025-10-12 08:28:37] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 05:47 shared
[2025-10-12 08:28:37] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 05:47 input.tar.gz
[2025-10-12 08:28:37] -rw-r--r--. 1 boincer umatlas         0 Oct 12 05:47 boinc_lockfile
[2025-10-12 08:28:37] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 05:47 pandaJob.out
[2025-10-12 08:28:37] -rw-------. 1 boincer umatlas    975536 Oct 12 05:48 agis_schedconf.cvmfs.json
[2025-10-12 08:28:37] -rw-------. 1 boincer umatlas   1560580 Oct 12 05:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:28:37] drwx------. 5 boincer umatlas      4096 Oct 12 05:48 pilot3
[2025-10-12 08:28:37] -rw-r--r--. 1 boincer umatlas      6944 Oct 12 08:19 init_data.xml
[2025-10-12 08:28:37] -rw-------. 1 boincer umatlas 190706233 Oct 12 08:27 HITS.46676269._067870.pool.root.1
[2025-10-12 08:28:37] -rw-r--r--. 1 boincer umatlas       529 Oct 12 08:27 boinc_task_state.xml
[2025-10-12 08:28:37] -rw-------. 1 boincer umatlas      1035 Oct 12 08:27 memory_monitor_summary.json
[2025-10-12 08:28:37] -rw-------. 1 boincer umatlas    408270 Oct 12 08:27 log.46676269._067870.job.log.tgz.1
[2025-10-12 08:28:37] -rw-------. 1 boincer umatlas      7773 Oct 12 08:27 heartbeat.json
[2025-10-12 08:28:37] -rw-------. 1 boincer umatlas        95 Oct 12 08:28 pilot_heartbeat.json
[2025-10-12 08:28:37] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 08:28 boinc_mmap_file
[2025-10-12 08:28:37] -rw-r--r--. 1 boincer umatlas        27 Oct 12 08:28 wrapper_checkpoint.txt
[2025-10-12 08:28:37] -rw-------. 1 boincer umatlas      5083 Oct 12 08:28 pilotlog.txt
[2025-10-12 08:28:37] -rw-------. 1 boincer umatlas   1282575 Oct 12 08:28 log.46676269._067870.job.log.1
[2025-10-12 08:28:37] -rw-------. 1 boincer umatlas       357 Oct 12 08:28 output.list
[2025-10-12 08:28:37] -rw-r--r--. 1 boincer umatlas       620 Oct 12 08:28 runtime_log
[2025-10-12 08:28:37] -rw-------. 1 boincer umatlas   1710080 Oct 12 08:28 result.tar.gz
[2025-10-12 08:28:37] -rw-r--r--. 1 boincer umatlas      8698 Oct 12 08:28 runtime_log.err
[2025-10-12 08:28:37] -rw-------. 1 boincer umatlas       655 Oct 12 08:28 BgYNDmfHzR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm8sSMDmRB4czm.diag
[2025-10-12 08:28:37] -rw-r--r--. 1 boincer umatlas     21069 Oct 12 08:28 stderr.txt
[2025-10-12 08:28:37] HITS file was successfully produced:
[2025-10-12 08:28:37] -rw-------. 1 boincer umatlas 190706233 Oct 12 08:27 shared/HITS.pool.root.1
[2025-10-12 08:28:37]  *** Contents of shared directory: ***
[2025-10-12 08:28:37] total 402320
[2025-10-12 08:28:37] -rw-r--r--. 2 boincer umatlas 218952513 Oct 12 05:47 ATLAS.root_0
[2025-10-12 08:28:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 05:47 start_atlas.sh
[2025-10-12 08:28:37] -rw-r--r--. 2 boincer umatlas    569675 Oct 12 05:47 input.tar.gz
[2025-10-12 08:28:37] -rw-------. 1 boincer umatlas 190706233 Oct 12 08:27 HITS.pool.root.1
[2025-10-12 08:28:37] -rw-------. 1 boincer umatlas   1710080 Oct 12 08:28 result.tar.gz
08:28:39 (996425): run_atlas exited; CPU time 37547.945732
08:28:39 (996425): called boinc_finish(0)

</stderr_txt>
]]>

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