Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:53:00 (923646): wrapper (7.7.26015): starting
04:53:00 (923646): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 04:53:00] Arguments: --nthreads 8
[2025-10-12 04:53:00] Threads: 8
[2025-10-12 04:53:00] Checking for CVMFS
[2025-10-12 04:53:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 04:53:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 04:53:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 04:53:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 04:53:01] 2.13.2.0 850183 129027 481080 151613 2 353 30540688 32935936 32817 16776704 0 258056947 99.610 257401035 21078 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 04:53:01] CVMFS is ok
[2025-10-12 04:53:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:53:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 04:53:01] Further information can be found at the LHC@home message board.
[2025-10-12 04:53:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:53:01] Checking for apptainer binary...
[2025-10-12 04:53:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 04:53:01] Running /usr/bin/apptainer --version
[2025-10-12 04:53:01] apptainer version 1.4.3-1.el9
[2025-10-12 04:53:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:53:02] c6-12-29-2.aglt2.org
[2025-10-12 04:53:02] apptainer works
[2025-10-12 04:53:02] Set ATHENA_PROC_NUMBER=8
[2025-10-12 04:53:02] Set ATHENA_CORE_NUMBER=8
[2025-10-12 04:53:02] Starting ATLAS job with PandaID=6839163934
[2025-10-12 04:53:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:43:32]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:43:32] 2025-10-12 13:42:22,240 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:43:32] 2025-10-12 13:42:22,265 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:43:32] 2025-10-12 13:42:22,286 | INFO     | sum of square deviations: 6954002853.13827
[2025-10-12 09:43:32] 2025-10-12 13:42:22,288 | INFO     | sum of deviations: 61103804579.712746
[2025-10-12 09:43:32] 2025-10-12 13:42:22,289 | INFO     | mean x: 1760267906.1170213
[2025-10-12 09:43:32] 2025-10-12 13:42:22,289 | INFO     | mean y: 2415390.705673759
[2025-10-12 09:43:32] 2025-10-12 13:42:22,289 | INFO     | -- intersect: -15464800889.594572
[2025-10-12 09:43:32] 2025-10-12 13:42:22,289 | INFO     | intersect: -15464800889.594572
[2025-10-12 09:43:32] 2025-10-12 13:42:22,338 | INFO     | chi2: 3.4667506070947622
[2025-10-12 09:43:32] 2025-10-12 13:42:22,339 | INFO     | sum of square deviations: 6590656809.198575
[2025-10-12 09:43:32] 2025-10-12 13:42:22,337 | INFO     | time since job start (17310s) is within the limit (172800.0s)
[2025-10-12 09:43:32] 2025-10-12 13:42:22,416 | INFO     | 17315s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-12 09:43:32] 2025-10-12 13:42:22,416 | INFO     | sum of deviations: 95849465572.34648
[2025-10-12 09:43:32] 2025-10-12 13:42:22,416 | INFO     | mean x: 1760267753.6209385
[2025-10-12 09:43:32] 2025-10-12 13:42:22,416 | INFO     | mean y: 2429816.974729242
[2025-10-12 09:43:32] 2025-10-12 13:42:22,416 | INFO     | -- intersect: -25597556395.82859
[2025-10-12 09:43:32] 2025-10-12 13:42:22,417 | INFO     | intersect: -25597556395.82859
[2025-10-12 09:43:32] 2025-10-12 13:42:22,417 | INFO     | chi2: 2.0244055804468686
[2025-10-12 09:43:32] 2025-10-12 13:42:22,417 | INFO     | current chi2=2.0244055804468686 (change=41.60509912931466 %)
[2025-10-12 09:43:32] 2025-10-12 13:42:22,418 | INFO     | sum of square deviations: 6240160566.235255
[2025-10-12 09:43:32] 2025-10-12 13:42:22,470 | INFO     | sum of deviations: 93885616441.11765
[2025-10-12 09:43:32] 2025-10-12 13:42:22,471 | INFO     | mean x: 1760267601.1176472
[2025-10-12 09:43:32] 2025-10-12 13:42:22,471 | INFO     | mean y: 2428962.3088235296
[2025-10-12 09:43:32] 2025-10-12 13:42:22,471 | INFO     | -- intersect: -26481474308.78326
[2025-10-12 09:43:32] 2025-10-12 13:42:22,471 | INFO     | intersect: -26481474308.78326
[2025-10-12 09:43:32] 2025-10-12 13:42:22,471 | INFO     | chi2: 2.023456544531065
[2025-10-12 09:43:32] 2025-10-12 13:42:22,489 | INFO     | current chi2=2.023456544531065 (change=0.04687973225177735 %)
[2025-10-12 09:43:32] 2025-10-12 13:42:22,490 | INFO     | right removable region: 271
[2025-10-12 09:43:32] 2025-10-12 13:42:22,490 | INFO     | sum of square deviations: 6590584828.700398
[2025-10-12 09:43:32] 2025-10-12 13:42:22,493 | INFO     | sum of deviations: 4745540703.703962
[2025-10-12 09:43:32] 2025-10-12 13:42:22,493 | INFO     | mean x: 1760268058.6281588
[2025-10-12 09:43:32] 2025-10-12 13:42:22,493 | INFO     | mean y: 2438915.9097472923
[2025-10-12 09:43:32] 2025-10-12 13:42:22,550 | INFO     | -- intersect: -1265039454.943283
[2025-10-12 09:43:32] 2025-10-12 13:42:22,550 | INFO     | intersect: -1265039454.943283
[2025-10-12 09:43:32] 2025-10-12 13:42:22,550 | INFO     | chi2: 1.565540991026055
[2025-10-12 09:43:32] 2025-10-12 13:42:22,551 | INFO     | current chi2=1.565540991026055 (change=54.84125717546138 %)
[2025-10-12 09:43:32] 2025-10-12 13:42:22,551 | INFO     | sum of square deviations: 6240152148.235255
[2025-10-12 09:43:32] 2025-10-12 13:42:22,604 | INFO     | sum of deviations: -5805881259.411747
[2025-10-12 09:43:32] 2025-10-12 13:42:22,604 | INFO     | mean x: 1760268211.1176472
[2025-10-12 09:43:32] 2025-10-12 13:42:22,604 | INFO     | mean y: 2443496.419117647
[2025-10-12 09:43:32] 2025-10-12 13:42:22,604 | INFO     | -- intersect: 1640209367.4574428
[2025-10-12 09:43:32] 2025-10-12 13:42:22,604 | INFO     | intersect: 1640209367.4574428
[2025-10-12 09:43:32] 2025-10-12 13:42:22,605 | INFO     | chi2: 1.517618393919096
[2025-10-12 09:43:32] 2025-10-12 13:42:22,605 | INFO     | current chi2=1.517618393919096 (change=3.0610886193117537 %)
[2025-10-12 09:43:32] 2025-10-12 13:42:22,605 | INFO     | left removable region: 20
[2025-10-12 09:43:32] 2025-10-12 13:42:22,606 | INFO     | sum of square deviations: 4903619933.513951
[2025-10-12 09:43:32] 2025-10-12 13:42:22,653 | INFO     | sum of deviations: 16951806661.737045
[2025-10-12 09:43:32] 2025-10-12 13:42:22,654 | INFO     | mean x: 1760268180.613546
[2025-10-12 09:43:32] 2025-10-12 13:42:22,654 | INFO     | mean y: 2464036.4302788842
[2025-10-12 09:43:32] 2025-10-12 13:42:22,654 | INFO     | -- intersect: -6082780390.167278
[2025-10-12 09:43:32] 2025-10-12 13:42:22,654 | INFO     | intersect: -6082780390.167278
[2025-10-12 09:43:32] 2025-10-12 13:42:22,655 | INFO     | chi2: 0.005729076824169268
[2025-10-12 09:43:32] 2025-10-12 13:42:22,655 | INFO     | -- intersect: -6082780390.167278
[2025-10-12 09:43:32] 2025-10-12 13:42:22,655 | INFO     | current memory leak: 3.46 B/s (using 251 data points, chi2=0.01)
[2025-10-12 09:43:32] 2025-10-12 13:42:22,656 | INFO     | could have reported an average CPU frequency of 2571 MHz (13 samples)
[2025-10-12 09:43:32] 2025-10-12 13:42:22,656 | INFO     | ..............................
[2025-10-12 09:43:32] 2025-10-12 13:42:22,656 | INFO     | . Timing measurements:
[2025-10-12 09:43:32] 2025-10-12 13:42:22,656 | INFO     | . get job = 0 s
[2025-10-12 09:43:32] 2025-10-12 13:42:22,656 | INFO     | . initial setup = 5 s
[2025-10-12 09:43:32] 2025-10-12 13:42:22,656 | INFO     | . payload setup = 27 s
[2025-10-12 09:43:32] 2025-10-12 13:42:22,656 | INFO     | . stage-in = 0 s
[2025-10-12 09:43:32] 2025-10-12 13:42:22,656 | INFO     | . payload execution = 17184 s
[2025-10-12 09:43:32] 2025-10-12 13:42:22,657 | INFO     | . stage-out = 7 s
[2025-10-12 09:43:32] 2025-10-12 13:42:22,657 | INFO     | . log creation = 1 s
[2025-10-12 09:43:32] 2025-10-12 13:42:22,657 | INFO     | ..............................
[2025-10-12 09:43:32] 2025-10-12 13:42:23,334 | INFO     | 
[2025-10-12 09:43:32] 2025-10-12 13:42:23,335 | INFO     | job summary report
[2025-10-12 09:43:32] 2025-10-12 13:42:23,335 | INFO     | --------------------------------------------------
[2025-10-12 09:43:32] 2025-10-12 13:42:23,335 | INFO     | PanDA job id: 6839163934
[2025-10-12 09:43:32] 2025-10-12 13:42:23,335 | INFO     | task id: 46676269
[2025-10-12 09:43:32] 2025-10-12 13:42:23,335 | INFO     | errors: (none)
[2025-10-12 09:43:32] 2025-10-12 13:42:23,335 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:43:32] 2025-10-12 13:42:23,335 | INFO     | pilot state: finished 
[2025-10-12 09:43:32] 2025-10-12 13:42:23,335 | INFO     | transexitcode: 0
[2025-10-12 09:43:32] 2025-10-12 13:42:23,335 | INFO     | exeerrorcode: 0
[2025-10-12 09:43:32] 2025-10-12 13:42:23,335 | INFO     | exeerrordiag: 
[2025-10-12 09:43:32] 2025-10-12 13:42:23,335 | INFO     | exitcode: 0
[2025-10-12 09:43:32] 2025-10-12 13:42:23,336 | INFO     | exitmsg: OK
[2025-10-12 09:43:32] 2025-10-12 13:42:23,336 | INFO     | cpuconsumptiontime: 48956 s
[2025-10-12 09:43:32] 2025-10-12 13:42:23,336 | INFO     | nevents: 400
[2025-10-12 09:43:32] 2025-10-12 13:42:23,336 | INFO     | neventsw: 0
[2025-10-12 09:43:32] 2025-10-12 13:42:23,336 | INFO     | pid: 948209
[2025-10-12 09:43:32] 2025-10-12 13:42:23,336 | INFO     | pgrp: 948209
[2025-10-12 09:43:32] 2025-10-12 13:42:23,336 | INFO     | corecount: 8
[2025-10-12 09:43:32] 2025-10-12 13:42:23,336 | INFO     | event service: False
[2025-10-12 09:43:32] 2025-10-12 13:42:23,336 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 22: 2349175, 23: 2349203, 17216: 2380973, 17217: 2381100, 17225: 2390154, 17226: 2390210, 17261: 2390404}
[2025-10-12 09:43:32] 2025-10-12 13:42:23,336 | INFO     | --------------------------------------------------
[2025-10-12 09:43:32] 2025-10-12 13:42:23,336 | INFO     | 
[2025-10-12 09:43:32] 2025-10-12 13:42:23,336 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 09:43:32] 2025-10-12 13:42:23,542 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,542 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,542 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,542 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,543 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,543 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,543 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,543 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:43:32] 2025-10-12 13:42:23,543 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,543 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:43:32] 2025-10-12 13:42:23,544 | INFO     | job 6839163934 has completed (purged errors)
[2025-10-12 09:43:32] 2025-10-12 13:42:23,544 | INFO     | overall cleanup function is called
[2025-10-12 09:43:32] 2025-10-12 13:42:24,555 | INFO     | --- collectZombieJob: --- 10, [948209]
[2025-10-12 09:43:32] 2025-10-12 13:42:24,556 | INFO     | zombie collector waiting for pid 948209
[2025-10-12 09:43:32] 2025-10-12 13:42:24,556 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:43:32] 2025-10-12 13:42:24,556 | INFO     | collected zombie processes
[2025-10-12 09:43:32] 2025-10-12 13:42:24,556 | INFO     | will attempt to kill all subprocesses of pid=948209
[2025-10-12 09:43:32] 2025-10-12 13:42:28,262 | INFO     | process IDs to be killed: [948209] (in reverse order)
[2025-10-12 09:43:32] 2025-10-12 13:42:29,134 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:43:32] 2025-10-12 13:42:29,135 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:43:32] 2025-10-12 13:42:29,241 | INFO     | did not find any defunct processes belonging to 948209
[2025-10-12 09:43:32] 2025-10-12 13:42:29,358 | INFO     | did not find any defunct processes belonging to 948209
[2025-10-12 09:43:32] 2025-10-12 13:42:29,359 | INFO     | ready for new job
[2025-10-12 09:43:32] 2025-10-12 13:42:29,359 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:43:32] 2025-10-12 13:42:29,380 | INFO     | ***************************************
[2025-10-12 09:43:32] 2025-10-12 13:42:29,380 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:43:32] 2025-10-12 13:42:29,381 | INFO     | ***************************************
[2025-10-12 09:43:32] 2025-10-12 13:42:29,381 | INFO     | 
[2025-10-12 09:43:32] 2025-10-12 13:42:29,417 | INFO     | architecture information:
[2025-10-12 09:43:32] 2025-10-12 13:42:29,430 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:43:32] 2025-10-12 13:42:29,541 | INFO     | cat /etc/os-release:
[2025-10-12 09:43:32] NAME="CentOS Linux"
[2025-10-12 09:43:32] VERSION="7 (Core)"
[2025-10-12 09:43:32] ID="centos"
[2025-10-12 09:43:32] ID_LIKE="rhel fedora"
[2025-10-12 09:43:32] VERSION_ID="7"
[2025-10-12 09:43:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:43:32] ANSI_COLOR="0;31"
[2025-10-12 09:43:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:43:32] HOME_URL="https://www.centos.org/"
[2025-10-12 09:43:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:43:32] 
[2025-10-12 09:43:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:43:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:43:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:43:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:43:32] 
[2025-10-12 09:43:32] 2025-10-12 13:42:29,541 | INFO     | ***************************************
[2025-10-12 09:43:32] 2025-10-12 13:42:30,044 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 09:43:32] 2025-10-12 13:42:30,084 | INFO     | sufficient remaining disk space (93812948992 B)
[2025-10-12 09:43:32] 2025-10-12 13:42:30,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:43:32] 2025-10-12 13:42:30,084 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:43:32] 2025-10-12 13:42:30,085 | INFO     | update_server=False
[2025-10-12 09:43:32] 2025-10-12 13:42:30,085 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:43:32] 2025-10-12 13:42:30,108 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:43:32] 2025-10-12 13:42:30,108 | INFO     | aborting loop
[2025-10-12 09:43:32] 2025-10-12 13:42:30,108 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:43:32] 2025-10-12 13:42:30,489 | INFO     | all data control threads have been joined
[2025-10-12 09:43:32] 2025-10-12 13:42:30,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:43:32] 2025-10-12 13:42:30,590 | INFO     | all payload control threads have been joined
[2025-10-12 09:43:32] 2025-10-12 13:42:30,591 | INFO     | all job control threads have been joined
[2025-10-12 09:43:32] 2025-10-12 13:42:31,114 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:43:32] 2025-10-12 13:42:31,114 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:43:32] 2025-10-12 13:42:31,422 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:43:32] 2025-10-12 13:42:31,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:43:32] 2025-10-12 13:42:31,495 | INFO     | [data] control thread has finished
[2025-10-12 09:43:32] 2025-10-12 13:42:31,596 | INFO     | [payload] control thread has finished
[2025-10-12 09:43:32] 2025-10-12 13:42:31,597 | INFO     | [job] control thread has finished
[2025-10-12 09:43:32] 2025-10-12 13:42:31,645 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:43:32] 2025-10-12 13:42:31,659 | INFO     | [job] validate thread has finished
[2025-10-12 09:43:32] 2025-10-12 13:42:31,888 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:43:32] 2025-10-12 13:42:32,386 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:43:32] 2025-10-12 13:42:32,470 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:43:32] 2025-10-12 13:42:32,485 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:43:32] 2025-10-12 13:42:32,524 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:43:32] 2025-10-12 13:42:32,647 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:43:32] 2025-10-12 13:42:33,392 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:43:32] 2025-10-12 13:42:34,116 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:43:32] 2025-10-12 13:42:57,648 | INFO     | PID=937600 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 09:43:32] 2025-10-12 13:42:57,664 | INFO     | .. there are 38 such processes running
[2025-10-12 09:43:32] 2025-10-12 13:42:57,666 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:43:32] 2025-10-12 13:42:57,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:43:32] 2025-10-12 13:42:57,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:43:32] 2025-10-12 13:43:22,438 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:43:32] 2025-10-12 13:43:23,768 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139801987929920)>', '<ExcThread(monitor, started 139801495848704)>']
[2025-10-12 09:43:32] 2025-10-12 13:43:23,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:43:32] 2025-10-12 13:43:23,960 | INFO     | [monitor] control thread has ended
[2025-10-12 09:43:32] 2025-10-12 13:43:28,794 | INFO     | all workflow threads have been joined
[2025-10-12 09:43:32] 2025-10-12 13:43:28,795 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:43:32] 2025-10-12 13:43:28,795 | INFO     | traces error code: 0
[2025-10-12 09:43:32] 2025-10-12 13:43:28,795 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:43:32] 2025-10-12 13:43:30,990 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:43:32] 2025-10-12 13:43:31,033 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:43:32] 2025-10-12 13:43:31,052 [wrapper] pilotpid: 937600
[2025-10-12 09:43:32] 2025-10-12 13:43:31,079 [wrapper] Pilot exit status: 0
[2025-10-12 09:43:32] 2025-10-12 13:43:31,238 [wrapper] pandaids: 6839163934
[2025-10-12 09:43:32] 2025-10-12 13:43:31,433 [wrapper] cleanup supervisor_pilot 1823851 937601
[2025-10-12 09:43:32] 2025-10-12 13:43:31,460 [wrapper] Test setup, not cleaning
[2025-10-12 09:43:32] 2025-10-12 13:43:31,489 [wrapper] apfmon messages muted
[2025-10-12 09:43:32] 2025-10-12 13:43:31,521 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:43:32] 2025-10-12 13:43:31,540 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:43:32]  *** Error codes and diagnostics ***
[2025-10-12 09:43:32]     "exeErrorCode": 0,
[2025-10-12 09:43:32]     "exeErrorDiag": "",
[2025-10-12 09:43:32]     "pilotErrorCode": 0,
[2025-10-12 09:43:32]     "pilotErrorDiag": "",
[2025-10-12 09:43:32]  *** Listing of results directory ***
[2025-10-12 09:43:32] total 418572
[2025-10-12 09:43:32] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 20:05 pilot3.tar.gz
[2025-10-12 09:43:32] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 20:27 queuedata.json
[2025-10-12 09:43:32] -rwx------. 1 boincer umatlas     36292 Oct 11 20:28 runpilot2-wrapper.sh
[2025-10-12 09:43:32] -rw-r--r--. 1 boincer umatlas       100 Oct 12 04:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:43:32] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 04:52 run_atlas
[2025-10-12 09:43:32] -rw-r--r--. 1 boincer umatlas       105 Oct 12 04:52 job.xml
[2025-10-12 09:43:32] -rw-r--r--. 2 boincer umatlas 221450331 Oct 12 04:52 EVNT.46676267._002770.pool.root.1
[2025-10-12 09:43:32] -rw-r--r--. 2 boincer umatlas    569687 Oct 12 04:53 input.tar.gz
[2025-10-12 09:43:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 04:53 start_atlas.sh
[2025-10-12 09:43:32] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 04:53 shared
[2025-10-12 09:43:32] -rw-r--r--. 1 boincer umatlas         0 Oct 12 04:53 boinc_lockfile
[2025-10-12 09:43:32] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 04:53 pandaJob.out
[2025-10-12 09:43:32] -rw-------. 1 boincer umatlas    975520 Oct 12 04:53 agis_schedconf.cvmfs.json
[2025-10-12 09:43:32] drwx------. 5 boincer umatlas      4096 Oct 12 04:53 pilot3
[2025-10-12 09:43:32] -rw-r--r--. 1 boincer umatlas      6860 Oct 12 09:36 init_data.xml
[2025-10-12 09:43:32] -rw-------. 1 boincer umatlas 198069478 Oct 12 09:39 HITS.46676269._067638.pool.root.1
[2025-10-12 09:43:32] -rw-r--r--. 1 boincer umatlas       531 Oct 12 09:40 boinc_task_state.xml
[2025-10-12 09:43:32] -rw-------. 1 boincer umatlas      1044 Oct 12 09:41 memory_monitor_summary.json
[2025-10-12 09:43:32] -rw-------. 1 boincer umatlas   1560580 Oct 12 09:41 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:43:32] -rw-------. 1 boincer umatlas    491547 Oct 12 09:41 log.46676269._067638.job.log.tgz.1
[2025-10-12 09:43:32] -rw-------. 1 boincer umatlas      7832 Oct 12 09:42 heartbeat.json
[2025-10-12 09:43:32] -rw-------. 1 boincer umatlas        95 Oct 12 09:42 pilot_heartbeat.json
[2025-10-12 09:43:32] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 09:43 boinc_mmap_file
[2025-10-12 09:43:32] -rw-r--r--. 1 boincer umatlas        28 Oct 12 09:43 wrapper_checkpoint.txt
[2025-10-12 09:43:32] -rw-------. 1 boincer umatlas      4823 Oct 12 09:43 pilotlog.txt
[2025-10-12 09:43:32] -rw-------. 1 boincer umatlas   2101448 Oct 12 09:43 log.46676269._067638.job.log.1
[2025-10-12 09:43:32] -rw-------. 1 boincer umatlas       357 Oct 12 09:43 output.list
[2025-10-12 09:43:32] -rw-r--r--. 1 boincer umatlas       620 Oct 12 09:43 runtime_log
[2025-10-12 09:43:32] -rw-------. 1 boincer umatlas   2611200 Oct 12 09:43 result.tar.gz
[2025-10-12 09:43:32] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 09:43 runtime_log.err
[2025-10-12 09:43:32] -rw-------. 1 boincer umatlas       657 Oct 12 09:43 gC1MDma7yR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmr3hNDmtGfTqn.diag
[2025-10-12 09:43:32] -rw-r--r--. 1 boincer umatlas     21063 Oct 12 09:43 stderr.txt
[2025-10-12 09:43:32] HITS file was successfully produced:
[2025-10-12 09:43:32] -rw-------. 1 boincer umatlas 198069478 Oct 12 09:39 shared/HITS.pool.root.1
[2025-10-12 09:43:32]  *** Contents of shared directory: ***
[2025-10-12 09:43:32] total 412828
[2025-10-12 09:43:32] -rw-r--r--. 2 boincer umatlas 221450331 Oct 12 04:52 ATLAS.root_0
[2025-10-12 09:43:32] -rw-r--r--. 2 boincer umatlas    569687 Oct 12 04:53 input.tar.gz
[2025-10-12 09:43:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 04:53 start_atlas.sh
[2025-10-12 09:43:32] -rw-------. 1 boincer umatlas 198069478 Oct 12 09:39 HITS.pool.root.1
[2025-10-12 09:43:32] -rw-------. 1 boincer umatlas   2611200 Oct 12 09:43 result.tar.gz
09:43:34 (923646): run_atlas exited; CPU time 49826.125803
09:43:34 (923646): called boinc_finish(0)

</stderr_txt>
]]>

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